View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7109_high_13 (Length: 261)
Name: NF7109_high_13
Description: NF7109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7109_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 44729858 - 44730107
Alignment:
| Q |
1 |
cacaaaaattaaacctctcttcttcatttatctgcaaactagtttcatattctccaatttcaactttctttttcttcaaaaaccttacaagccaaggaac |
100 |
Q |
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| T |
44729858 |
cacaaaaattaaacctctcttcttcatttatctgcaaactagtttcaacttctccaatttcaactttctttttcttcaaaaaccttacaagccaaggaac |
44729957 |
T |
|
| Q |
101 |
aaagccttgagagctcatgagataattattggtattaagagctgagttagcgatcgaaagaattcgacgacaatcttcggcgcttaatccgacaggcttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
44729958 |
aaagccttgagagctcatgagataattattggtattaagagctgagttagcgatcgaaagaattcgactacaatcttcggcgcttaatccgacaggcttc |
44730057 |
T |
|
| Q |
201 |
cctggtttcattggaaccatgacatattttttgttcatttctaggttctt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44730058 |
cctggtttcattggaaccatgacatattttttgttcatttctaggttctt |
44730107 |
T |
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