View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7113_high_35 (Length: 287)
Name: NF7113_high_35
Description: NF7113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7113_high_35 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 7840865 - 7841126
Alignment:
| Q |
8 |
cgaagaaaatgctatgcttggcttcctgaccacggtgtatcaatgtacattaaattaaattaaatggtgcattccagcaaaattgctannnnnnnccaac |
107 |
Q |
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| T |
7840865 |
cgaaaaaaatgctatgcttggcttcctgaccacggtgtatcaatgtacattaaattaaattaaacggtgcattccagcaaaattgctatttttttccaac |
7840964 |
T |
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| Q |
108 |
nnnnnnnnnnnngaaccaaaatattgtaacaatctccaatcacaaaattttgtccgtgtctatagcatgatcatggactcaaattcagggttatagagta |
207 |
Q |
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| T |
7840965 |
aaaaaaaaaaa-gaaccaaattattgtaacaatctccaatcacaaaattttgtccgtgtctatagcatgatcatggactcaaattcagggttatagagta |
7841063 |
T |
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| Q |
208 |
tggaccaccaatgaaacgcataaaagagattaaaagtgagggggtggggtttaccttttacct |
270 |
Q |
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| T |
7841064 |
tggaccaccaatgaaacgcataaaagagattaaaagtgagggcgtggggtttaacttttacct |
7841126 |
T |
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