View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7113_high_39 (Length: 261)
Name: NF7113_high_39
Description: NF7113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7113_high_39 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 7 - 237
Target Start/End: Complemental strand, 39098374 - 39098144
Alignment:
| Q |
7 |
catatttctatattattaattaagtaaacaacattgtgctggctgatccatgtttattcattcacttttaacttggcattggataagaatattttccaga |
106 |
Q |
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| T |
39098374 |
catatttctatattattaattaagtaaacaacattgtgctggctgatccatgtttattcattcacttttaacttggcattggataagaatattttccaga |
39098275 |
T |
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| Q |
107 |
aatattaaagtaattaaaaattcaatggtttttattttatcaataccatatccgcatattgcagatactactttaattagttggcaaaagtaaagcaaat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39098274 |
aatattaaagtaattaaaaattcaatggtttttattttatcaataccatatccgcatattgcagatactactttaattagttggcaaaagtaaagcaaat |
39098175 |
T |
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| Q |
207 |
gagagaatttttctattaactatcttaggac |
237 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
39098174 |
gagagaatttttctattaactatcttaggac |
39098144 |
T |
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