View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7113_low_55 (Length: 240)
Name: NF7113_low_55
Description: NF7113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7113_low_55 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37305629 - 37305390
Alignment:
| Q |
1 |
catggttggtgattttgttcatgttaatgcctaagaatatcttcatgttgtagtgacattcttacttttcaagaaaacctgaatatctttaactcgtcat |
100 |
Q |
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| T |
37305629 |
catgtttggtgattttgttcatgttaatgcctaagaatatcttcatgttgtagtgacattcttacttttcaagaaaacctgaatatctttaactcgtcat |
37305530 |
T |
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| Q |
101 |
atttgtgaatcagatattgcttgcttcggggataggcttcataatttacgctggtttagccggggaagatgtgtggaaagaatttttccagtactgcagg |
200 |
Q |
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| T |
37305529 |
atttgtgaatcagatattgcttgcttcggggataggcatcataatttacgctggtttagctggggaagatgtgtggaaagaatttttccagtactgcagg |
37305430 |
T |
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| Q |
201 |
gaaagcaaatttgtaagttcaaactcagcttttcatattg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
37305429 |
gaaagcaaatttgtaagttcaaactcagcttttcatattg |
37305390 |
T |
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