View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7113_low_58 (Length: 237)

Name: NF7113_low_58
Description: NF7113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7113_low_58
NF7113_low_58
[»] scaffold0038 (4 HSPs)
scaffold0038 (1-223)||(43896-44118)
scaffold0038 (10-221)||(28398-28609)
scaffold0038 (1-223)||(35666-35888)
scaffold0038 (63-156)||(40517-40610)
[»] chr6 (50 HSPs)
chr6 (1-223)||(28243734-28243956)
chr6 (1-223)||(28326417-28326639)
chr6 (1-223)||(28504053-28504275)
chr6 (11-223)||(28182067-28182279)
chr6 (10-221)||(28227900-28228111)
chr6 (1-223)||(28235504-28235726)
chr6 (1-223)||(28296761-28296983)
chr6 (1-223)||(28515090-28515312)
chr6 (1-223)||(28186332-28186555)
chr6 (1-170)||(29826925-29827094)
chr6 (29-169)||(26812495-26812635)
chr6 (28-169)||(31285525-31285666)
chr6 (3-185)||(28140476-28140658)
chr6 (63-156)||(28240355-28240448)
chr6 (43-183)||(26862561-26862701)
chr6 (87-175)||(27530370-27530458)
chr6 (28-183)||(26647445-26647600)
chr6 (28-183)||(26753413-26753568)
chr6 (29-175)||(28793326-28793472)
chr6 (30-183)||(27337156-27337309)
chr6 (30-183)||(27397896-27398049)
chr6 (9-169)||(27610195-27610355)
chr6 (28-140)||(27679916-27680028)
chr6 (9-169)||(27717574-27717734)
chr6 (1-173)||(28097514-28097686)
chr6 (43-175)||(28782082-28782214)
chr6 (43-175)||(28787219-28787351)
chr6 (28-183)||(26656931-26657086)
chr6 (28-183)||(26762902-26763057)
chr6 (8-223)||(27592042-27592257)
chr6 (29-139)||(25539510-25539620)
chr6 (87-185)||(26892649-26892747)
chr6 (43-175)||(25492388-25492520)
chr6 (8-124)||(29477185-29477301)
chr6 (28-139)||(25484025-25484136)
chr6 (28-139)||(25511858-25511969)
chr6 (28-139)||(26143834-26143945)
chr6 (8-223)||(27676641-27676856)
chr6 (27-164)||(29843065-29843199)
chr6 (43-176)||(26938010-26938143)
chr6 (87-139)||(26056947-26056999)
chr6 (87-139)||(26076917-26076969)
chr6 (43-151)||(26803427-26803535)
chr6 (28-144)||(26824785-26824901)
chr6 (30-170)||(26950711-26950851)
chr6 (28-139)||(25580688-25580799)
chr6 (29-148)||(27215419-27215538)
chr6 (28-115)||(27426741-27426828)
chr6 (1-124)||(27576085-27576208)
chr6 (28-142)||(27697688-27697802)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-223)||(57315-57537)
[»] chr2 (2 HSPs)
chr2 (1-173)||(3280598-3280770)
chr2 (1-170)||(17992289-17992458)
[»] chr4 (3 HSPs)
chr4 (1-172)||(5090022-5090193)
chr4 (29-139)||(18723186-18723296)
chr4 (28-115)||(18074727-18074814)
[»] chr5 (1 HSPs)
chr5 (1-185)||(16691806-16691990)
[»] chr1 (4 HSPs)
chr1 (28-144)||(267440-267556)
chr1 (1-185)||(26136827-26137011)
chr1 (43-175)||(28163445-28163577)
chr1 (28-175)||(28126744-28126891)
[»] scaffold0419 (1 HSPs)
scaffold0419 (43-169)||(8468-8594)
[»] scaffold0277 (2 HSPs)
scaffold0277 (29-175)||(3781-3927)
scaffold0277 (43-169)||(12750-12876)
[»] scaffold0349 (1 HSPs)
scaffold0349 (9-169)||(2614-2774)
[»] chr8 (2 HSPs)
chr8 (98-185)||(16441092-16441179)
chr8 (43-169)||(29272913-29273039)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-115)||(60535-60622)


Alignment Details
Target: scaffold0038 (Bit Score: 211; Significance: 1e-116; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 43896 - 44118
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43896 ttccaataataaagaaaaggcttcaccgaaacaaggttctgctaattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 43995  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43996 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 44095  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    |||||||||||||||||||||||    
T  44096 gagaccgaagctcttgaattgtt 44118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 28398 - 28609
Alignment:
Q  10 taaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcgg 109  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||||| ||    
T  28398 taaagcaaaggcttcaccgaaagaaagttctattgattctcgatgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttgg 28497  T
Q  110 tcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccgaa 209  Q
    |||||| |||| ||||||| ||||||||||| ||| ||| ||||||  |||||||||||||||||||||||||||| ||  |||||||||||||| ||||    
T  28498 tcctggaagtaaagtgatcattaccactcgaaacaaacaattgctagcaagtcatgggattgaaagagcatatgaaatagataagttaaatgagaacgaa 28597  T
Q  210 gctcttgaattg 221  Q
    ||||||||||||    
T  28598 gctcttgaattg 28609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35666 - 35888
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| || |||| | ||||    
T  35666 ttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctagatgatgttcacgaactaaagcaattgcaggttttggcgggagaaattga 35765  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    |||||| |||||||| |||| ||||||| ||||||||||||||| ||| ||||||  ||||||||||||||||||| | || ||| ||  ||||||||||    
T  35766 ttggtttggtcctggaagtaaagtgatcattaccactcgagacaaacaattgctagcaagtcatgggattgaaagaacgtacgaaatagataagttaaat 35865  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    |||| ||||||||||||||||||    
T  35866 gagaacgaagctcttgaattgtt 35888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 40517 - 40610
Alignment:
Q  63 gaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaa 156  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||| ||||||  || ||||| ||| ||||||||||||||| || ||||||||    
T  40517 gaactgaagcaactgcagggtttggctggagggcttgattggttcagtcctgacagcagagtcatcattaccactcgagacaaacgtttgctaa 40610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28243734 - 28243956
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28243734 ttccaataataaagaaaaggcttcaccgaaacaaggttctgctaattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 28243833  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28243834 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 28243933  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    |||||||||||||||||||||||    
T  28243934 gagaccgaagctcttgaattgtt 28243956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28326417 - 28326639
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28326417 ttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcgatgatgttcacgaactgaagcaattgcaggttttggctggaggacttga 28326516  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||| |    
T  28326517 ttggttcggtcctggcagtagagtgatcgttaccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatatgaaattcctaagttaatt 28326616  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
     |||  |||||||||||||||||    
T  28326617 aagagagaagctcttgaattgtt 28326639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28504053 - 28504275
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28504053 ttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcgatgatgttcacgaactgaagcaattgcaggttttggctggaggacttga 28504152  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||| |    
T  28504153 ttggttcggtcctggcagtagagtgatcgttaccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatatgaaattcctaagttaatt 28504252  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
     |||  |||||||||||||||||    
T  28504253 aagagagaagctcttgaattgtt 28504275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 28182067 - 28182279
Alignment:
Q  11 aaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggt 110  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||    
T  28182067 aaagcaaaggcttcaccgaaagaaggttctattgattctagatgatgttcacgaactgaagcaattgcaggttttggctggaggaattgattggtttggt 28182166  T
Q  111 cctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccgaag 210  Q
    |||||||||| ||||||| ||||||||||||||  ||| ||||||  | |||||||||||||||||||||||||| ||  ||||||||||||||  ||||    
T  28182167 cctggtagtaaagtgatcattaccactcgagacgaacaattgctagtaggtcatgggattgaaagagcatatgaaatagataagttaaatgagaaagaag 28182266  T
Q  211 ctcttgaattgtt 223  Q
    |||||||||||||    
T  28182267 ctcttgaattgtt 28182279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 28227900 - 28228111
Alignment:
Q  10 taaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcgg 109  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||||| ||    
T  28227900 taaagcaaaggcttcaccgaaagaaagttctattgattctcgatgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttgg 28227999  T
Q  110 tcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccgaa 209  Q
    |||||| |||| ||||||| ||||||||||| ||| ||| ||||||  |||||||||||||||||||||||||||| ||  |||||||||||||| ||||    
T  28228000 tcctggaagtaaagtgatcattaccactcgaaacaaacaattgctagcaagtcatgggattgaaagagcatatgaaatagataagttaaatgagaacgaa 28228099  T
Q  210 gctcttgaattg 221  Q
    ||||||||||||    
T  28228100 gctcttgaattg 28228111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28235504 - 28235726
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| || |||| | ||||    
T  28235504 ttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctagatgatgttcacgaactaaagcaattgcaggttttggcgggagaaattga 28235603  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    |||||| |||||||| |||| ||||||| ||||||||||||||| ||| ||||||  ||||||||||||||||||| | || ||| ||  ||||||||||    
T  28235604 ttggtttggtcctggaagtaaagtgatcattaccactcgagacaaacaattgctagcaagtcatgggattgaaagaacgtacgaaatagataagttaaat 28235703  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    |||| ||||||||||||||||||    
T  28235704 gagaacgaagctcttgaattgtt 28235726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 28296983 - 28296761
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||| ||||| |||||| |||||||    
T  28296983 ttccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgttcatgaactgaagcaattgcaagttttggctggacgacttga 28296884  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    |||||| |||| ||| |||| ||||||| ||||||||| ||| | | | |||||| |  |||||||||||||||||||||||||| ||| ||||||||||    
T  28296883 ttggtttggtcttggaagtaaagtgatcattaccactcaagaaaaaaaattgctagatggtcatgggattgaaagagcatatgaaatacataagttaaat 28296784  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    || |  |||||||||||||||||    
T  28296783 gacaaagaagctcttgaattgtt 28296761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28515090 - 28515312
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||| ||||| |||||| |||||||    
T  28515090 ttccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgttcatgaactgaagcaattgcaagttttggctggacgacttga 28515189  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    |||||| |||| ||| |||| ||||||| ||||||||| ||| | | | |||||| |  |||||||||||||||||||||||||| ||| ||||||||||    
T  28515190 ttggtttggtcttggaagtaaagtgatcattaccactcaagaaaaaaaattgctagatggtcatgggattgaaagagcatatgaaatacataagttaaat 28515289  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    || |  |||||||||||||||||    
T  28515290 gacaaagaagctcttgaattgtt 28515312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28186332 - 28186555
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaa-ttgcaggttttagctggaggacttg 99  Q
    ||||||| ||| || |||||||||||| |||||||||| || ||||||||||||||||||||||||| |||| | ||| | ||||| ||||||||| ||     
T  28186332 ttccaatcatagagaaaaggcttcaccaaaagaaggttttgttgattctcgatgatgttcacgaactaaagccagttggaagttttggctggaggatttc 28186431  T
Q  100 attggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaa 199  Q
     |||||| |||||||||||||  |||||| ||||||||||||||| ||| ||||||     |||||||||||||||||||||| |||||| |||||||||    
T  28186432 gttggtttggtcctggtagtattgtgatcattaccactcgagacaaacaattgctagctcatcatgggattgaaagagcatataaattacataagttaaa 28186531  T
Q  200 tgagaccgaagctcttgaattgtt 223  Q
    |||||  |||||||||||||||||    
T  28186532 tgagaaagaagctcttgaattgtt 28186555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29826925 - 29827094
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||||||||||||||||||    |||||||| || ||  ||||||| || || ||| || |  ||| ||||||||| ||| | || |||||||||||    
T  29826925 ttccaataataaagcaaaggctaggacgaaagaaagtacttttgattcttgacgacgttgacaacatgaggcaattgcaagttatggcgggaggacttga 29827024  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggatt 170  Q
    |||||| |||||||| || | ||||||| ||||||||||||||  ||||||||||| |||||||||||||    
T  29827025 ttggtttggtcctggcagcatagtgatcattaccactcgagaccaacatttgctaacaagtcatgggatt 29827094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 26812495 - 26812635
Alignment:
Q  29 aaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatc 128  Q
    |||||| ||| || ||||||||||||||||| || |||  ||||||||| ||||||| | |||||  | || |||| |||||||||| |||||||| |||    
T  26812495 aaagaaagttttgttgattctcgatgatgttgacaaaccaaagcaattgaaggttttggttggagagcctggttggctcggtcctggaagtagagtcatc 26812594  T
Q  129 gttaccactcgagacagacatttgctaaaaagtcatgggat 169  Q
     ||||||||||||||||||||||||||  | ||||||||||    
T  26812595 attaccactcgagacagacatttgctatcatgtcatgggat 26812635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 31285525 - 31285666
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| || |  |||| ||| |||| | ||| ||||||||||||||||||||||| | ||| || ||||| ||    
T  31285525 gaaagaagattcttttgattctcgatgatgttgacaatatgaatcaactgcatgctttggctggaggacttgattggttcggccgtggaagcagagtcat 31285624  T
Q  128 cgttaccactcgagacagacatttgctaaaaagtcatgggat 169  Q
    | ||||||||||||||| ||| || ||||  |||||||||||    
T  31285625 cattaccactcgagacaaacacttactaagtagtcatgggat 31285666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 28140476 - 28140658
Alignment:
Q  3 ccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgatt 102  Q
    |||||||||||| ||||||| |  | ||||||||||||  ||||||||||||| ||| | ||||| || || ||| ||||||| |||||||  | | |||    
T  28140476 ccaataataaaggaaaggctacgactaaagaaggttcttttgattctcgatgacgttgatgaactaaaacagttgaaggttttggctggagaccctaatt 28140575  T
Q  103 ggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaa 185  Q
    || | |||| ||||||| | ||  ||||||| |||||||||| ||||||||||  | ||||||||||||| ||| | ||||||    
T  28140576 ggcttggtcatggtagtcgggttgtcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaa 28140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 28240355 - 28240448
Alignment:
Q  63 gaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaa 156  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||| ||||||  || ||||| ||| ||||||||||||||| || ||||||||    
T  28240355 gaactgaagcaactgcagggtttggctggagggcttgattggttcagtcctgacagcagagtcatcattaccactcgagacaaacgtttgctaa 28240448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 26862561 - 26862701
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| || ||||| | ||  |  |||  ||||||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||    
T  26862561 tgattctcgatgatgttgacaaactggaacagctagaggcattagctggaggacttgattggtttggtcatggaagtagagtcatcattaccactcgaga 26862660  T
Q  143 cagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
     | ||| || |||| | | |||||||| |||||| ||||||    
T  26862661 taaacacttactaacatgccatgggatagaaagaacatatg 26862701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 27530458 - 27530370
Alignment:
Q  87 gctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaag 175  Q
    ||||||||||||||||||||||||||||| |||||||| ||| |||| |||||| ||| ||| || ||||| | ||||||||| |||||    
T  27530458 gctggaggacttgattggttcggtcctgggagtagagtcatcattactactcgaaacaaacacttactaaagattcatgggatagaaag 27530370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 26647445 - 26647600
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| || ||||| | ||  |  ||| ||| ||||||||||||||||||||||||||||| || ||||| ||    
T  26647445 gaaagaagattcttttgattctcgatgatgttaaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcat 26647544  T
Q  128 cgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
    | | ||||| ||||| | ||| || ||||   |||||||||| |||||| ||||||    
T  26647545 catcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatg 26647600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 26753413 - 26753568
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| || ||||| | ||  |  ||| ||| ||||||||||||||||||||||||||||| || ||||| ||    
T  26753413 gaaagaagattcttttgattctcgatgatgttaaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcat 26753512  T
Q  128 cgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
    | | ||||| ||||| | ||| || ||||   |||||||||| |||||| ||||||    
T  26753513 catcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatg 26753568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 28793326 - 28793472
Alignment:
Q  29 aaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatc 128  Q
    ||||||| ||||  ||||||||||||||||| ||||  |||||||| | || | ||| || ||||||| |||||||||||| | ||| || || || |||    
T  28793326 aaagaagattcttttgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtcatc 28793425  T
Q  129 gttaccactcgagacagacatttgctaaaaagtcatgggattgaaag 175  Q
     |||| |||||||||| ||| || |||| |||||||||||| |||||    
T  28793426 attacgactcgagacaaacacttactaagaagtcatgggatagaaag 28793472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 183
Target Start/End: Complemental strand, 27337309 - 27337156
Alignment:
Q  30 aagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcg 129  Q
    |||||| ||||  ||||||||||||||||| || ||||| | ||  |  ||| ||| ||||||||||||||||||||||||||||| || ||||| |||     
T  27337309 aagaagattcttttgattctcgatgatgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatca 27337210  T
Q  130 ttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
    | ||||| ||||| | ||| || ||||   |||||||||| |||||| ||||||    
T  27337209 tcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatg 27337156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 183
Target Start/End: Complemental strand, 27398049 - 27397896
Alignment:
Q  30 aagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcg 129  Q
    |||||| ||||  ||||||||||||||||| || ||||| | ||  |  ||| ||| ||||||||||||||||||||||||||||| || ||||| |||     
T  27398049 aagaagattcttttgattctcgatgatgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatca 27397950  T
Q  130 ttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
    | ||||| ||||| | ||| || ||||   |||||||||| |||||| ||||||    
T  27397949 tcaccacccgagataaacacttactaacctgtcatgggatagaaagaacatatg 27397896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 27610355 - 27610195
Alignment:
Q  9 ataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcg 108  Q
    |||||| ||||||| ||  |||||||||||||  ||||||| ||||||||| || |  |||||||| | || | ||| |||||||||| |||||||||||    
T  27610355 ataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgattggttcg 27610256  T
Q  109 gtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggat 169  Q
    | | ||| || | ||| ||| || |||||||||||| ||| |||||||   ||||||||||    
T  27610255 gccgtggaagcaaagtcatcattgccactcgagacaaacacttgctaacctgtcatgggat 27610195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 27679916 - 27680028
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| || |  |||||||| |||| | ||| |||||||||||||||||||||||   ||| || ||||| ||    
T  27679916 gaaagaagattcttttgattctcgatgatgttgacaatttgaagcaactgcatgctttggctggaggacttgattggttcggatgtggaagcagagtcat 27680015  T
Q  128 cgttaccactcga 140  Q
    | |||||||||||    
T  27680016 cattaccactcga 27680028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 27717734 - 27717574
Alignment:
Q  9 ataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcg 108  Q
    |||||| ||||||| ||  |||||||||||||  ||||||| ||||||||| || |  |||||||| | || | ||| |||||||||| |||||||||||    
T  27717734 ataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgattggttcg 27717635  T
Q  109 gtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggat 169  Q
    | | ||| || | ||| ||| ||||||||||||||| ||| || ||||   ||||||||||    
T  27717634 gccgtggaagcaaagtcatcattaccactcgagacaaacacttactaacctgtcatgggat 27717574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28097686 - 28097514
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||| |||||||| || | ||||||||||||  |||||||||| ||  || |  || |||||||  |||| | | | ||||||||   |||    
T  28097686 ttccaatcataaaacaaaggctacaacaaaagaaggttctattgattctcgacgacattaataaattgaagcagctgcaagctatggctggagggactga 28097587  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaa 173  Q
    |||||| ||| |||| ||||||||||| |||||||||||||| | | | ||||||  ||||||||||||||||    
T  28097586 ttggtttggtgctggcagtagagtgattgttaccactcgagataaaaacttgctagcaagtcatgggattgaa 28097514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 28782082 - 28782214
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| ||||  || ||||| | || | ||| || ||||||| |||||||||||| | ||| || || || ||| |||||||||||||    
T  28782082 tgattctcgatgatgttgacgatatggagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgaga 28782181  T
Q  143 cagacatttgctaaaaagtcatgggattgaaag 175  Q
    || ||| || |||| |||||||||||| |||||    
T  28782182 caaacacttactaagaagtcatgggatagaaag 28782214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 28787219 - 28787351
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| ||||  |||||||| | || | ||| || ||||||| |||||||||||| | ||| || || || ||| |||| ||||||||    
T  28787219 tgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattacgactcgaga 28787318  T
Q  143 cagacatttgctaaaaagtcatgggattgaaag 175  Q
    || ||| || |||| |||||||||||| |||||    
T  28787319 caaacacttactaagaagtcatgggatagaaag 28787351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 26656931 - 26657086
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| || ||||| ||||  |  ||| ||| || |||||||||||||||||||||  ||| || ||||| ||    
T  26656931 gaaagaagattcttttgattctcgatgatgttgacaaactggagcagctagaggctttggcaggaggacttgattggttcggttgtggaagcagagtcat 26657030  T
Q  128 cgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
    | |||||||| |||| | ||| ||||||||  |||| ||||| |||| | ||||||    
T  26657031 cattaccactagagataaacacttgctaaactgtcacgggatagaaataacatatg 26657086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 26762902 - 26763057
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| || ||||| ||||  |  ||| ||| || |||||||||||||||||||||  ||| || ||||| ||    
T  26762902 gaaagaagattcttttgattctcgatgatgttgacaaactggagcagctagaggctttggcaggaggacttgattggttcggttgtggaagcagagtcat 26763001  T
Q  128 cgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatg 183  Q
    | |||||||| |||| | ||| ||||||||  |||| ||||| |||| | ||||||    
T  26763002 cattaccactagagataaacacttgctaaactgtcacgggatagaaataacatatg 26763057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 27592257 - 27592042
Alignment:
Q  8 aataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttc 107  Q
    ||||||| ||||||| ||  |||||||| ||||  ||||||| ||||||||| || ||||| | ||  |  | | ||| |||||||||||||||||||||    
T  27592257 aataaaggaaaggctacatggaaagaagattcttttgattcttgatgatgttgacaaactggatcagctagatgctttggctggaggacttgattggttc 27592158  T
Q  108 ggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccg 207  Q
    |||||||| || ||||| ||| | ||||| ||||| | ||| || ||| |  |||||||||| |||| | |||||| | ||    |||| |||| ||| |    
T  27592157 ggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaaaaacatatgcagtagaagagttgaatgggacag 27592058  T
Q  208 aagctcttgaattgtt 223  Q
    ||||||||||||||||    
T  27592057 aagctcttgaattgtt 27592042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 25539510 - 25539620
Alignment:
Q  29 aaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatc 128  Q
    ||||||| ||||  ||||||| ||||||||| || ||||  ||||  |  ||| ||| ||||||||||||||||||||||||||||| || ||||| |||    
T  25539510 aaagaagattcttttgattcttgatgatgttgacaaactagagcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatc 25539609  T
Q  129 gttaccactcg 139  Q
     ||||||||||    
T  25539610 attaccactcg 25539620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 26892747 - 26892649
Alignment:
Q  87 gctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaa 185  Q
    ||||| ||||| |||||||| |||  ||||||| ||||||||||||| |||||||||||| ||||||||  |||||||   ||||||| | ||||||||    
T  26892747 gctggtggactcgattggtttggtattggtagtcgagtgatcgttactactcgagacagaaatttgctagcaagtcatcatattgaaaaaacatatgaa 26892649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 25492520 - 25492388
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| ||  |||| ||||  |  ||| ||| |||| |||||||||||||||||||| ||| ||  |||| ||| |||||||||||||    
T  25492520 tgattctcgatgatgttgacagactggagcagctagaggatttggctgaaggacttgattggttcggtcgtggaagcggagttatcattaccactcgaga 25492421  T
Q  143 cagacatttgctaaaaagtcatgggattgaaag 175  Q
    || |||  | ||||  ||||||||||| |||||    
T  25492420 caaacacatactaaccagtcatgggatagaaag 25492388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 29477301 - 29477185
Alignment:
Q  8 aataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttc 107  Q
    ||||||||| |||||  |||||||||| ||||| || || || ||||||||  ||  |||  ||||| || ||| ||| ||||||||||||||||||||     
T  29477301 aataaagcacaggctctaccgaaagaaagttcttctcatcctagatgatgtggacagactagagcaaatggaggctttggctggaggacttgattggttt 29477202  T
Q  108 ggtcctggtagtagagt 124  Q
    ||||||||||| |||||    
T  29477201 ggtcctggtagcagagt 29477185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 25484025 - 25484136
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||| | ||||||||| || ||||| ||||  |  ||| ||| ||||||||||||||||||||||||| ||| || ||||| ||    
T  25484025 gaaagaagattcttttgattgttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcat 25484124  T
Q  128 cgttaccactcg 139  Q
    | ||||||||||    
T  25484125 cattaccactcg 25484136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 25511858 - 25511969
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||| || |||||| || ||||| ||||  |  ||| ||| |||||||||||||| |||||||||||||| || ||||| ||    
T  25511858 gaaagaagattcttttgattcttgacgatgttgacaaactggagcagctagaggctttggctggaggacttgactggttcggtcctggaagcagagtcat 25511957  T
Q  128 cgttaccactcg 139  Q
    | ||||||||||    
T  25511958 cattaccactcg 25511969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 26143834 - 26143945
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||| ||||||||| || ||||| ||||  |  ||| ||| ||||||||||||||||||||||||| ||| || || || ||    
T  26143834 gaaagaagattcttttgattcttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagggtcat 26143933  T
Q  128 cgttaccactcg 139  Q
    | ||||||||||    
T  26143934 cattaccactcg 26143945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 27676856 - 27676641
Alignment:
Q  8 aataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttc 107  Q
    ||||||| ||||||| ||  |||||||| ||||  ||||||| ||||||||| || ||||| | ||  |  ||| ||| |||||| |||| ||||||||     
T  27676856 aataaaggaaaggctacatggaaagaagattcttttgattcttgatgatgttgacaaactggatcagctagaggctttggctggaagactcgattggttt 27676757  T
Q  108 ggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaatgagaccg 207  Q
    |||||||| || ||||| ||| | ||||| ||||| | ||| || ||| |  |||||||||| |||| | |||||| | ||    |||| |||||||| |    
T  27676756 ggtcctggaagcagagtcatcatcaccacccgagataaacacttactagactgtcatgggatagaaaaaacatatgcagtagaagagttgaatgagacag 27676657  T
Q  208 aagctcttgaattgtt 223  Q
    ||||||||||||||||    
T  27676656 aagctcttgaattgtt 27676641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 29843199 - 29843065
Alignment:
Q  27 cgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtga 126  Q
    |||||||| |||||  ||||||| || |||||| || | || | ||||||||| ||| | || || |||||||| ||||| ||||||||||| |||||||    
T  29843199 cgaaagaaagttcttttgattcttgacgatgttgacaacctaaggcaattgcaagttatggcgggcggacttgactggtttggtcctggtagcagagtga 29843100  T
Q  127 tcgttaccactcgagacagacatttgctaaaaagtcat 164  Q
    || ||   |||||||||  ||||||||||| |||||||    
T  29843099 tcatt---actcgagaccaacatttgctaacaagtcat 29843065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 26938010 - 26938143
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||| || |||||| | ||| ||||||| ||||||| | ||  ||||| || | ||||| | |||| ||| || | ||| || ||||||||||||||    
T  26938010 tgattcttgacgatgttgatgaattgaagcagttgcaggctataattggagaacctaattggcttggtcatggaagcaaagtcattgttaccactcgaga 26938109  T
Q  143 cagacatttgctaaaaagtcatgggattgaaaga 176  Q
    || ||||||||||  | |||||||||||||||||    
T  26938110 caaacatttgctatcatgtcatgggattgaaaga 26938143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 26056947 - 26056999
Alignment:
Q  87 gctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcg 139  Q
    ||||||||||||||||||||||||| ||| || ||||| ||| ||||||||||    
T  26056947 gctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcg 26056999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 26076917 - 26076969
Alignment:
Q  87 gctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcg 139  Q
    ||||||||||||||||||||||||| ||| || ||||| ||| ||||||||||    
T  26076917 gctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcg 26076969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 26803427 - 26803535
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| ||||  || ||||| | || | ||| |||||||||| ||||||||| || | ||| || || || ||| |||||||||||||    
T  26803427 tgattctcgatgatgttgacgatatggagcaactacatgctttggctggaggacctgattggtttggccatggaagcagggtcatcattaccactcgaga 26803526  T
Q  143 cagacattt 151  Q
    || ||||||    
T  26803527 caaacattt 26803535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 26824785 - 26824901
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    ||||||| ||||| ||||||||||||||  || || ||||| ||||| |  | | ||| ||||||||| ||||||||||||||  ||| || ||||| ||    
T  26824785 gaaagaaagttcttctgattctcgatgacattgacaaactggagcaactagatgctttggctggaggatttgattggttcggtaatggcagcagagtcat 26824884  T
Q  128 cgttaccactcgagaca 144  Q
    | |||| ||||||||||    
T  26824885 cattacaactcgagaca 26824901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 26950711 - 26950851
Alignment:
Q  30 aagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcg 129  Q
    ||||| ||| || ||||||||||||||||| || || | |||||||||||||||||   |||||  | || |||| | |||| ||| || ||||| |||     
T  26950711 aagaaagttttgttgattctcgatgatgttgacaaaataaagcaattgcaggttttgattggagagcctggttggcttggtcgtggcagcagagtcatca 26950810  T
Q  130 ttaccactcgagacagacatttgctaaaaagtcatgggatt 170  Q
    |||||||||| |||| ||||||| ||  | |||||||||||    
T  26950811 ttaccactcgtgacaaacatttgttatcatgtcatgggatt 26950851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 25580688 - 25580799
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||| | ||||||||| || ||||| ||||  |  ||| ||| ||||||||||||||||||||||||| ||| || || || ||    
T  25580688 gaaagaagattcttttgatttttgatgatgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagtgtcat 25580787  T
Q  128 cgttaccactcg 139  Q
    | ||||||||||    
T  25580788 cattaccactcg 25580799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 27215419 - 27215538
Alignment:
Q  29 aaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatc 128  Q
    ||||||| ||||  ||||||| ||||||||| || ||||  ||||  |  ||| ||| |||||||||||||||||||| |||  ||| |||||||| |||    
T  27215419 aaagaagattcttttgattcttgatgatgttgacaaactagagcagctagaggctttggctggaggacttgattggtttggtggtggaagtagagtcatc 27215518  T
Q  129 gttaccactcgagacagaca 148  Q
     |||| |||||| |||||||    
T  27215519 attacgactcgaaacagaca 27215538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 27426828 - 27426741
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctgg 115  Q
    |||||||| ||||  ||||||||||||| ||| || |  |||||||| || | | ||| ||||||||| |||||||||||||||||||    
T  27426828 gaaagaagattcttttgattctcgatgacgttgacaatatgaagcaactgaatgctttggctggaggagttgattggttcggtcctgg 27426741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 27576208 - 27576085
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||| |||||||| ||   |||||| ||| || ||||||||||||||||| || |||| ||||| ||||    ||| | |||||  ||||     
T  27576208 ttccaatcataaaacaaaggctacatacaaagaaagttttgttgattctcgatgatgttgacaaactaaagcagttgcgaactttggttggagagcttgg 27576109  T
Q  101 ttggttcggtcctggtagtagagt 124  Q
    |||| |||||||||||||||||||    
T  27576108 ttggctcggtcctggtagtagagt 27576085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 27697802 - 27697688
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  |||||||||| |||||| || ||||| | ||  | |||| ||| ||||||||||| |||||||| |||||||| || ||||| ||    
T  27697802 gaaagaagattcttttgattctcgacgatgttgacaaactggatcagctacaggctttggctggaggactcgattggtttggtcctggaagcagagtcat 27697703  T
Q  128 cgttaccactcgaga 142  Q
    | | ||||| |||||    
T  27697702 catcaccacccgaga 27697688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 57537 - 57315
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  57537 ttccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctcgatgatgttcacgagctgaagcaattacaggttttggctggaggacttga 57438  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaattacctaagttaaat 200  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||  ||| ||||||  | |||||||||||||||||||||||||| ||  ||||||||||    
T  57437 ttggtttggtcctggtagtaaagtgatcattaccactcgagacgaacaattgctagcaggtcatgggattgaaagagcatatgaaatagataagttaaat 57338  T
Q  201 gagaccgaagctcttgaattgtt 223  Q
    ||||  |||||||||||||||||    
T  57337 gagaaagaagctcttgaattgtt 57315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3280598 - 3280770
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| |||||||||||||| ||||| || ||||||||  || |||| ||||| ||| ||||| |||||||  |||| || ||||||||||| |||||    
T  3280598 ttccaatcataaagcaaaggctacaccggaaaaaggttctattggttcttgatgacgttaacgaattgaagcaggtgcaagtcttagctggagggcttga 3280697  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaa 173  Q
    ||||||  ||  ||||||||| |||||| ||||||||||||||| ||| ||| ||  ||||||||||||||||    
T  3280698 ttggtttagtgttggtagtagggtgatcattaccactcgagacaaacacttgttatcaagtcatgggattgaa 3280770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 17992458 - 17992289
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| ||||||||||||||    | |||||| |||||  |||||||||||||  |  || |||| ||||||||||||||||| | |||||  | ||     
T  17992458 ttccaatcataaagcaaaggctatgtcaaaagaaagttctcttgattctcgatgacatcgacaaactaaagcaattgcaggttttggttggagagcctgg 17992359  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggatt 170  Q
    |||| | |||| ||| || ||||| ||| ||||||||||||||| ||||||| ||| | |||||||||||    
T  17992358 ttggcttggtcgtggcagcagagtcatcattaccactcgagacaaacatttgttaacatgtcatgggatt 17992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 5090193 - 5090022
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| |||||| ||||||| ||  ||||||| |||||  |||||||||||||| || || ||||||| ||| | |||||||| || |||| || |||    
T  5090193 ttccaatcataaagaaaaggctacaaagaaagaaagttcttttgattctcgatgatattgacaaactgaaacaactacaggttttggccggagaacctga 5090094  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattga 172  Q
    |||||| |||| ||| || ||||| ||| ||||||||||||||| ||| ||||||||| |||||||||||||    
T  5090093 ttggtttggtcttggcagcagagtcatcattaccactcgagacaaacacttgctaaaatgtcatgggattga 5090022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 18723296 - 18723186
Alignment:
Q  29 aaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatc 128  Q
    ||||||| ||||  ||||||||||||||||| || |  |||| ||| |||| | ||| |||||||||| ||||||||||||  |||| || ||||| |||    
T  18723296 aaagaagattcttttgattctcgatgatgttgacaatttgaaacaactgcatgctttggctggaggacctgattggttcggctctggaagcagagttatc 18723197  T
Q  129 gttaccactcg 139  Q
     ||||||||||    
T  18723196 attaccactcg 18723186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 18074727 - 18074814
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctgg 115  Q
    |||||||| ||||  ||||||||||||| ||| || |  |||||||| || | | ||| ||||||||| |||||||||||||||||||    
T  18074727 gaaagaagattcttttgattctcgatgacgttgacaatatgaagcaactgaatgctttggctggaggagttgattggttcggtcctgg 18074814  T

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Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 16691806 - 16691990
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||||||||| |||||||| || | ||| ||||||||  ||||||||||||||||| | || |  ||||||||||| ||| | | |||||  |  ||    
T  16691806 ttccaataataaaacaaaggctacaacaaaaaaaggttcttttgattctcgatgatgttgatgagcaaaagcaattgcaagttatggttggagagcccga 16691905  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaa 185  Q
    |||||| |||||||| |||||||| ||| ||||||||||||||| ||| || |||| ||||||||| ||||| |||  |||||||    
T  16691906 ttggtttggtcctggaagtagagtcatcattaccactcgagacaaacacttactaacaagtcatggtattgatagaatatatgaa 16691990  T

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Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 267556 - 267440
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||||||||||||| ||||  | || |||||||| | ||| |||||||||||||||||||||||   ||| || |||||  |    
T  267556 gaaagaagattcttttgattctcgatgatgttaacgatataaaacaattgcatgctttggctggaggacttgattggttcggctatggaagcagagtcgt 267457  T
Q  128 cgttaccactcgagaca 144  Q
    |||||||||||||||||    
T  267456 cgttaccactcgagaca 267440  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 26136827 - 26137011
Alignment:
Q  1 ttccaataataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttga 100  Q
    ||||||| |||||  ||||||| || | ||||||  || || ||||||||||||| ||| || | || ||||| ||||||||||| | |||||  | |      
T  26136827 ttccaatcataaaagaaaggctacatcaaaagaaaattttgttgattctcgatgacgttgacaagctaaagcagttgcaggttttggttggagagcctag 26136926  T
Q  101 ttggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaa 185  Q
    |||| | |||||||| |||||||| ||| ||||||| ||||||| ||||||||||  | ||||||||||| |||||  |||||||    
T  26136927 ttggcttggtcctgggagtagagtcatcattaccacccgagacaaacatttgctatcatgtcatgggattaaaagaatatatgaa 26137011  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 28163577 - 28163445
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||| ||||||||  || ||||| ||||  || ||| ||| ||||||||||| ||||||||||||| ||| || || || ||| |||||||||||||    
T  28163577 tgattcttgatgatgtcgacaaactggagcagctggaggctttggctggaggactcgattggttcggtcgtggaagcagggtcatcattaccactcgaga 28163478  T
Q  143 cagacatttgctaaaaagtcatgggattgaaag 175  Q
    || ||| || ||||   |||||||||| |||||    
T  28163477 caaacacttactaacctgtcatgggatagaaag 28163445  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 28126891 - 28126744
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgat 127  Q
    |||||||| ||||  ||||||| ||||||||  || ||||| ||||  |  ||| ||| ||||||||||||||||||||||||| ||| || | ||| ||    
T  28126891 gaaagaagattcttttgattcttgatgatgtcgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcgtggaagcaaagtcat 28126792  T
Q  128 cgttaccactcgagacagacatttgctaaaaagtcatgggattgaaag 175  Q
    | ||||||||||||| | ||| || ||||   |||||||||| |||||    
T  28126791 cattaccactcgagagaaacacttactaacctgtcatgggatagaaag 28126744  T

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Target: scaffold0419 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 8468 - 8594
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| ||||  |||||||| | || | ||| || ||||||| |||||||||||| | ||| || || || ||| |||||||||||||    
T  8468 tgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgaga 8567  T
Q  143 cagacatttgctaaaaagtcatgggat 169  Q
    || ||| || |||| ||||||||||||    
T  8568 caaacacttactaagaagtcatgggat 8594  T

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Target: scaffold0277 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 3927 - 3781
Alignment:
Q  29 aaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatc 128  Q
    ||||||| ||||  ||||||||||||||||| ||||  || ||||| | |||| ||| || |||| || ||||||||| || | ||| || || || |||    
T  3927 aaagaagattcttttgattctcgatgatgttgacgatatggagcaactacaggctttggcaggagaacctgattggtttggccttggaagcagggtcatc 3828  T
Q  129 gttaccactcgagacagacatttgctaaaaagtcatgggattgaaag 175  Q
     ||||||||||||||| ||| ||||||| |||||||||||| |||||    
T  3827 attaccactcgagacaaacacttgctaagaagtcatgggatagaaag 3781  T

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Target: scaffold0277; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 12876 - 12750
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| ||||  |||||||| | || | ||| || ||||||| |||||||||||| | ||| || || || ||| |||||||||||||    
T  12876 tgattctcgatgatgttgacgatatgaagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgaga 12777  T
Q  143 cagacatttgctaaaaagtcatgggat 169  Q
    || ||| || |||| ||||||||||||    
T  12776 caaacacttactaagaagtcatgggat 12750  T

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Target: scaffold0349 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 2774 - 2614
Alignment:
Q  9 ataaagcaaaggcttcaccgaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcg 108  Q
    |||||| ||||||| ||  |||||||||||||  ||||||| ||||||||| || |  |||||||| | || | ||| |||||||||| |||||||||||    
T  2774 ataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgattggttcg 2675  T
Q  109 gtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggat 169  Q
    | | ||| || | ||| ||| ||||||||||||||| ||| || ||||   ||||||||||    
T  2674 gccgtggaagcaaagtcatcattaccactcgagacaaacacttactaacctgtcatgggat 2614  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 16441092 - 16441179
Alignment:
Q  98 tgattggttcggtcctggtagtagagtgatcgttaccactcgagacagacatttgctaaaaagtcatgggattgaaagagcatatgaa 185  Q
    ||||||||  ||||||||||| ||||| ||| |||| ||||| |||| ||| ||||||  |||||||||| |||||||| ||||||||    
T  16441092 tgattggtatggtcctggtagcagagttatcattacaactcgggacaaacagttgctagcaagtcatggggttgaaagaacatatgaa 16441179  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 29273039 - 29272913
Alignment:
Q  43 tgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctggtagtagagtgatcgttaccactcgaga 142  Q
    ||||||||||||||||| |  |  |||||||| | || | ||| |||||||||| |||||||||||| | ||| || | ||| ||| |||| ||||||||    
T  29273039 tgattctcgatgatgttgataatttgaagcaactacatgctttggctggaggacatgattggttcggccgtggaagcaaagtcatcattactactcgaga 29272940  T
Q  143 cagacatttgctaaaaagtcatgggat 169  Q
    || ||| |||||||   ||||||||||    
T  29272939 caaacacttgctaacttgtcatgggat 29272913  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 60535 - 60622
Alignment:
Q  28 gaaagaaggttctgctgattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggacttgattggttcggtcctgg 115  Q
    |||||||| ||||  ||||||||||||| ||| || |  |||||||| || | | ||| ||||||||| |||||||||||||||||||    
T  60535 gaaagaagattcttttgattctcgatgacgttgacaatatgaagcaactgaatgctttggctggaggagttgattggttcggtcctgg 60622  T

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