View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7115_low_7 (Length: 229)
Name: NF7115_low_7
Description: NF7115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7115_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 18691450 - 18691646
Alignment:
| Q |
21 |
agtctgcatgcaatgcattcacattttcttgatctagtattctt--gtgttgtattatctctaatccttattataagaaaatctttgaagattattttgg |
118 |
Q |
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| T |
18691450 |
agtctgcatgcaatgcattcacattttcttgatctagtattcttttgtgttgtattatctctaatccttattataagaaaatctttgaagattattttgg |
18691549 |
T |
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| Q |
119 |
ccctattcattagaaaatctctaatcacaatttttatggtctatttagttcttaatagacttttctactcctcatttattatgtcactccgtatttt |
215 |
Q |
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| T |
18691550 |
ccctattcattagaaaatctctaatcacaatttttatggtctatttagttcttaatagacttttctactcctcatttattatgtcactccgtatttt |
18691646 |
T |
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