View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7117_high_19 (Length: 261)

Name: NF7117_high_19
Description: NF7117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7117_high_19
NF7117_high_19
[»] chr4 (31 HSPs)
chr4 (1-261)||(26188316-26188576)
chr4 (116-249)||(1695310-1695442)
chr4 (104-260)||(29437987-29438143)
chr4 (118-261)||(19602340-19602483)
chr4 (112-261)||(10577022-10577172)
chr4 (130-251)||(5676765-5676886)
chr4 (104-241)||(10450874-10451011)
chr4 (109-257)||(4733271-4733419)
chr4 (104-232)||(9782494-9782621)
chr4 (112-244)||(15192808-15192938)
chr4 (112-244)||(47024154-47024285)
chr4 (130-261)||(31859315-31859446)
chr4 (118-260)||(18444770-18444910)
chr4 (104-226)||(18898588-18898709)
chr4 (112-227)||(22219294-22219409)
chr4 (112-261)||(39134190-39134339)
chr4 (112-184)||(9288565-9288637)
chr4 (112-250)||(33519606-33519744)
chr4 (131-241)||(51885210-51885319)
chr4 (114-257)||(7023630-7023774)
chr4 (104-244)||(17024322-17024461)
chr4 (134-222)||(21047790-21047878)
chr4 (104-257)||(22120231-22120385)
chr4 (129-241)||(12806377-12806488)
chr4 (104-182)||(1001868-1001951)
chr4 (98-183)||(12110717-12110801)
chr4 (104-246)||(17332039-17332184)
chr4 (104-183)||(20985007-20985086)
chr4 (131-184)||(27303364-27303415)
chr4 (99-172)||(24041792-24041867)
chr4 (193-241)||(25314725-25314773)
[»] chr2 (26 HSPs)
chr2 (1-261)||(9504477-9504740)
chr2 (1-261)||(9515843-9516106)
chr2 (112-246)||(21842597-21842731)
chr2 (23-261)||(27416572-27416811)
chr2 (112-246)||(21844226-21844358)
chr2 (112-261)||(18819243-18819390)
chr2 (19-257)||(21503886-21504125)
chr2 (105-241)||(14921484-14921619)
chr2 (104-259)||(25460486-25460641)
chr2 (119-261)||(18235720-18235862)
chr2 (104-246)||(25474583-25474724)
chr2 (109-257)||(20518659-20518806)
chr2 (135-249)||(17883988-17884103)
chr2 (104-222)||(27917437-27917555)
chr2 (120-261)||(24188572-24188713)
chr2 (131-216)||(35708374-35708458)
chr2 (113-226)||(41256774-41256886)
chr2 (160-232)||(1733694-1733765)
chr2 (133-232)||(18532962-18533060)
chr2 (131-225)||(16593198-16593291)
chr2 (107-232)||(21847860-21847985)
chr2 (171-241)||(30999353-30999423)
chr2 (107-208)||(23909058-23909158)
chr2 (112-184)||(22511490-22511562)
chr2 (130-222)||(24047938-24048033)
chr2 (206-246)||(31274412-31274452)
[»] chr1 (31 HSPs)
chr1 (19-261)||(11769310-11769552)
chr1 (1-261)||(11984509-11984771)
chr1 (9-258)||(50047654-50047905)
chr1 (66-261)||(34533194-34533391)
chr1 (61-261)||(23223942-23224143)
chr1 (19-224)||(18300346-18300556)
chr1 (102-259)||(30675992-30676148)
chr1 (104-261)||(21549213-21549367)
chr1 (118-236)||(19257371-19257489)
chr1 (104-249)||(12810735-12810879)
chr1 (130-257)||(14744865-14744992)
chr1 (112-246)||(15298273-15298407)
chr1 (104-249)||(26658065-26658209)
chr1 (112-261)||(31314109-31314258)
chr1 (109-259)||(52270619-52270770)
chr1 (171-261)||(25778300-25778390)
chr1 (102-231)||(9328591-9328718)
chr1 (159-258)||(23506343-23506442)
chr1 (113-241)||(15416441-15416570)
chr1 (112-244)||(23519139-23519270)
chr1 (112-184)||(25665189-25665261)
chr1 (95-214)||(30782294-30782411)
chr1 (130-228)||(9252085-9252182)
chr1 (112-182)||(23521135-23521204)
chr1 (137-243)||(26853748-26853853)
chr1 (102-231)||(9353554-9353681)
chr1 (19-67)||(34521642-34521690)
chr1 (131-183)||(24903227-24903278)
chr1 (206-261)||(25731041-25731096)
chr1 (110-144)||(25778387-25778421)
chr1 (46-87)||(17837314-17837355)
[»] chr3 (26 HSPs)
chr3 (1-261)||(19263175-19263438)
chr3 (19-261)||(19218500-19218745)
chr3 (45-253)||(10342328-10342538)
chr3 (104-261)||(14280683-14280840)
chr3 (113-261)||(8401807-8401955)
chr3 (104-259)||(26419315-26419471)
chr3 (102-246)||(27415697-27415840)
chr3 (115-243)||(2729000-2729124)
chr3 (109-256)||(22488268-22488414)
chr3 (109-261)||(19542490-19542642)
chr3 (104-242)||(11475439-11475578)
chr3 (2-102)||(25918573-25918673)
chr3 (41-168)||(16976897-16977026)
chr3 (137-226)||(28731053-28731142)
chr3 (53-246)||(33913943-33914137)
chr3 (160-246)||(18066248-18066334)
chr3 (104-261)||(18474767-18474925)
chr3 (109-246)||(21018179-21018317)
chr3 (104-259)||(21828593-21828750)
chr3 (35-165)||(13911950-13912086)
chr3 (131-227)||(21806099-21806195)
chr3 (171-231)||(25883651-25883711)
chr3 (112-183)||(5632016-5632087)
chr3 (107-183)||(23907685-23907762)
chr3 (131-228)||(11521775-11521871)
chr3 (193-244)||(13911873-13911924)
[»] chr8 (28 HSPs)
chr8 (19-261)||(24120823-24121063)
chr8 (19-251)||(32239837-32240070)
chr8 (108-261)||(30850451-30850604)
chr8 (109-257)||(12957076-12957224)
chr8 (50-256)||(24094725-24094932)
chr8 (109-249)||(23876520-23876657)
chr8 (104-261)||(11437963-11438119)
chr8 (112-261)||(27084973-27085121)
chr8 (104-227)||(11308225-11308348)
chr8 (112-240)||(28900727-28900853)
chr8 (112-261)||(28075053-28075204)
chr8 (108-257)||(18771500-18771649)
chr8 (112-244)||(12774265-12774397)
chr8 (109-260)||(13583011-13583162)
chr8 (113-252)||(15213162-15213300)
chr8 (151-261)||(16051739-16051850)
chr8 (114-260)||(24927258-24927405)
chr8 (112-246)||(28259944-28260076)
chr8 (104-260)||(6887598-6887755)
chr8 (132-241)||(13304983-13305091)
chr8 (46-145)||(16051564-16051665)
chr8 (129-244)||(22892658-22892774)
chr8 (118-259)||(28290776-28290914)
chr8 (118-261)||(5154338-5154479)
chr8 (19-98)||(23951908-23951987)
chr8 (104-230)||(29046699-29046824)
chr8 (112-183)||(14184562-14184633)
chr8 (192-259)||(23893663-23893730)
[»] chr5 (29 HSPs)
chr5 (42-260)||(16621967-16622188)
chr5 (19-243)||(18451539-18451766)
chr5 (121-258)||(20695196-20695333)
chr5 (36-261)||(17381328-17381555)
chr5 (105-261)||(19763285-19763442)
chr5 (109-244)||(12265003-12265138)
chr5 (19-261)||(25593960-25594204)
chr5 (104-244)||(24842264-24842404)
chr5 (130-242)||(17028848-17028960)
chr5 (104-244)||(24268672-24268810)
chr5 (104-244)||(24345302-24345440)
chr5 (104-261)||(18281605-18281762)
chr5 (130-251)||(20084070-20084191)
chr5 (129-261)||(7742305-7742436)
chr5 (19-178)||(25681186-25681347)
chr5 (104-246)||(30791192-30791332)
chr5 (118-244)||(20715161-20715286)
chr5 (104-260)||(18178704-18178859)
chr5 (149-261)||(22930528-22930641)
chr5 (138-246)||(25945816-25945924)
chr5 (163-226)||(31340804-31340867)
chr5 (118-243)||(24131210-24131336)
chr5 (131-232)||(12339457-12339557)
chr5 (104-185)||(26328387-26328467)
chr5 (192-232)||(26329537-26329577)
chr5 (159-230)||(15694651-15694722)
chr5 (130-189)||(24517759-24517818)
chr5 (137-183)||(31267659-31267705)
chr5 (193-237)||(30072703-30072747)
[»] chr7 (38 HSPs)
chr7 (1-242)||(3400410-3400655)
chr7 (19-241)||(20470082-20470307)
chr7 (19-242)||(23126705-23126930)
chr7 (104-257)||(5312171-5312325)
chr7 (42-253)||(21545187-21545398)
chr7 (19-259)||(20017547-20017789)
chr7 (1-222)||(23072921-23073145)
chr7 (104-257)||(24596389-24596542)
chr7 (149-261)||(4091926-4092037)
chr7 (46-232)||(20040161-20040345)
chr7 (19-232)||(20050287-20050498)
chr7 (104-227)||(9405254-9405376)
chr7 (108-184)||(21544290-21544366)
chr7 (130-261)||(22334704-22334835)
chr7 (112-257)||(5636773-5636920)
chr7 (112-226)||(26839604-26839717)
chr7 (131-232)||(2629947-2630047)
chr7 (141-249)||(7777524-7777631)
chr7 (134-241)||(7815891-7815997)
chr7 (110-261)||(9760664-9760815)
chr7 (109-184)||(30406213-30406288)
chr7 (104-241)||(21472364-21472500)
chr7 (118-261)||(18467072-18467216)
chr7 (104-244)||(7142630-7142773)
chr7 (206-261)||(9552710-9552765)
chr7 (104-221)||(21536942-21537059)
chr7 (113-228)||(315722-315837)
chr7 (133-241)||(7493862-7493969)
chr7 (119-243)||(11082122-11082244)
chr7 (131-230)||(20446807-20446905)
chr7 (112-232)||(11467482-11467602)
chr7 (104-261)||(15757988-15758144)
chr7 (112-244)||(9071004-9071135)
chr7 (206-261)||(9801106-9801161)
chr7 (118-232)||(7151467-7151580)
chr7 (113-172)||(3094034-3094093)
chr7 (104-221)||(7326379-7326497)
chr7 (192-261)||(17880424-17880493)
[»] chr6 (20 HSPs)
chr6 (19-228)||(17859787-17859998)
chr6 (19-254)||(19669921-19670157)
chr6 (102-246)||(30235763-30235904)
chr6 (47-261)||(16528215-16528416)
chr6 (20-261)||(13723175-13723415)
chr6 (130-246)||(32929889-32930006)
chr6 (131-229)||(9725606-9725703)
chr6 (110-257)||(26499254-26499401)
chr6 (112-242)||(30756219-30756353)
chr6 (112-246)||(9395996-9396131)
chr6 (104-241)||(15575529-15575663)
chr6 (112-243)||(16174753-16174885)
chr6 (104-261)||(1558231-1558387)
chr6 (114-261)||(22262943-22263089)
chr6 (105-257)||(12971754-12971903)
chr6 (112-231)||(15319421-15319540)
chr6 (193-258)||(13830386-13830454)
chr6 (112-249)||(16439923-16440061)
chr6 (104-172)||(15370120-15370189)
chr6 (104-184)||(28178629-28178710)
[»] scaffold0386 (2 HSPs)
scaffold0386 (130-261)||(11180-11311)
scaffold0386 (128-261)||(8148-8281)
[»] scaffold0171 (2 HSPs)
scaffold0171 (41-180)||(6793-6934)
scaffold0171 (5-175)||(21972-22144)
[»] scaffold0650 (1 HSPs)
scaffold0650 (114-249)||(5140-5274)
[»] scaffold0186 (1 HSPs)
scaffold0186 (110-261)||(33144-33295)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-162)||(68825-68988)
[»] scaffold0362 (1 HSPs)
scaffold0362 (133-244)||(8238-8348)
[»] scaffold0337 (1 HSPs)
scaffold0337 (116-261)||(3710-3855)
[»] scaffold0282 (1 HSPs)
scaffold0282 (112-244)||(22021-22152)
[»] scaffold0855 (1 HSPs)
scaffold0855 (131-241)||(2443-2552)
[»] scaffold0847 (1 HSPs)
scaffold0847 (131-241)||(2608-2717)
[»] scaffold0624 (1 HSPs)
scaffold0624 (114-225)||(4607-4717)
[»] scaffold0011 (1 HSPs)
scaffold0011 (204-259)||(227692-227747)
[»] scaffold0190 (1 HSPs)
scaffold0190 (104-251)||(11059-11207)
[»] scaffold0065 (1 HSPs)
scaffold0065 (112-261)||(12843-12992)
[»] scaffold0100 (1 HSPs)
scaffold0100 (109-242)||(37568-37702)
[»] scaffold0103 (1 HSPs)
scaffold0103 (159-241)||(37026-37107)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 26188576 - 26188316
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaa-ttaaattggacacaagaa 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  26188576 tactaatctataaagataaatttttaagattatcgatgcggattctcaattgaaaaagcattaagcacaaacaagaaaaaaattaaattggacacaagaa 26188477  T
Q  100 atataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatac 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26188476 atataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacatgacaacatac 26188377  T
Q  200 atcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||| |||| |||||||||    
T  26188376 atcgtaacaaaacaatag-aaaacataccctatagagaacaagaggaggatgaagatcctct 26188316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 1695310 - 1695442
Alignment:
Q  116 actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaat 215  Q
    |||||||||||  ||| ||||||||||||||| ||||||| | ||||||||||||| ||||||||||||  ||| |||||| ||||||| ||||||||||    
T  1695310 actttattaataatattcaacaaataagaaggggttcatcatggaaccctaatcaa-gaggtttagttggtcatgacaacaaacatcgtgacaaaacaat 1695408  T
Q  216 agaaaaacataccctagtgagaacaagaggatga 249  Q
    ||||||||||||||| | ||||||||||| ||||    
T  1695409 agaaaaacataccctcgagagaacaagagaatga 1695442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 260
Target Start/End: Complemental strand, 29438143 - 29437987
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| |||||||| ||||||||  | |||||||||||||||| | ||||||  | ||||||||||||||||||||||||||  |||   |||  |||||     
T  29438143 aactgaataaaaaatttattaaaagaatccaacaaataagaaagggttcattgtggaaccctaatcaaagaggtttagttgctcatggaaaccgacatca 29438044  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctc 260  Q
    | ||||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  29438043 ttacaaaacaatagaaaaacataccctagagataacaagagaatgatggagatcctc 29437987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 19602483 - 19602340
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    ||||||||| ||||||||||||| |||||| ||||||| | |||||||||||||||| |||||||||  |||  ||||  ||||| | ||||||||||||    
T  19602483 tttattaatagtatccaacaaatgagaaggggttcatcatggaaccctaatcaaagaagtttagttgctcatggcaaccgacatcattacaaaacaatag 19602384  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||||| | || ||||| |||||||| || |||||||    
T  19602383 aaaaacataccctcgagataacaaaaggatgatagaaatcctct 19602340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 10577172 - 10577022
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    |||||||| || ||| | |||||||||||||||||  ||||||| | |||||||| |||| ||||||||||||| ||||  ||||| ||||| | |||||    
T  10577172 aaaaacttcataaattgaatccaacaaataagaagaggttcatcatggaaccctagtcaatagaggtttagttggacatggcaacaaacatcattacaaa 10577073  T
Q  211 acaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  10577072 acaatataaaaacataccctagagaggacaagaggaggagggagatcctct 10577022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 5676886 - 5676765
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    |||||| |||||| |||  |||| ||||||||||||||||||||||||| ||||| ||||  ||||||||||| | |||||||||||||||||||||||     
T  5676886 atccaaaaaataataagaggttcttcttagaaccctaatcaaagaggttcagttgcacatagcaacatacatcattacaaaacaatagaaaaacatacca 5676787  T
Q  230 tagtgagaacaagaggatgatg 251  Q
    |||  |||||||||||| ||||    
T  5676786 tagaaagaacaagaggaggatg 5676765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 10450874 - 10451011
Alignment:
Q  104 aactaaataaaa-actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    |||| ||||||| |||||||||||  |||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||| ||| |||||||| |||    
T  10450874 aactgaataaaagactttattaataatatccaacaaataataaggggttcatcatagaaccctaatc-aagaggtttagttgttcatgacaacataaatc 10450972  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
     |||  |||| |||||||||||| || ||| ||||||||    
T  10450973 ataatgaaaccatagaaaaacatgccttagagagaacaa 10451011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 4733419 - 4733271
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    |||||||  ||||||||| | ||||||||||||||||| | |||||| | | |||||||||||||||||||||||| ||||  ||||| |  |  | |||    
T  4733419 aataaaacatttattaattgaatccaacaaataagaagtaattcatcgtgggaccctaatcaaagaggtttagttgcacatggcaacaaagcttattaca 4733320  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    |||||||||||||||||||| |||  ||||||| | || ||||||||||    
T  4733319 aaacaatagaaaaacataccttagaaagaacaacaagaggatggagatc 4733271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 9782494 - 9782621
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||||||||    ||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||  |||   ||||||||||     
T  9782494 aactgaatgaaaactttattaataaattccaacaaataagaaggggttcatcgtggaaccctaatc-aagaggtttagttgctcatgcaaacatacatca 9782592  T
Q  204 taacaaaacaatagaaaaacataccctag 232  Q
    ||||||||||||||| ||| |||||||||    
T  9782593 taacaaaacaatagacaaatataccctag 9782621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 15192938 - 15192808
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||   ||| |||||||||||||| ||||| |||  ||||||||||||| ||||||||||   | | |||||||||||| ||||||||    
T  15192938 aaaaactttattaataagatcaaacaaataagaaggggttca-cttgaaaccctaatcaaa-aggtttagtttctcttgacaacatacatcataacaaaa 15192841  T
Q  212 caatagaaaaacataccctagtgagaacaagag 244  Q
    ||||||||||||| ||||| | |||||||||||    
T  15192840 caatagaaaaacacaccctggagagaacaagag 15192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 47024154 - 47024285
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||  |||| |||||||||||||   |||||||| |||||||||| || ||||||| || |  ||| |||||| ||||| ||||||||    
T  47024154 aaaaactttattaataatatcaaacaaataagaagagattcatcttggaaccctaattaa-gaggtttcgtagctcatgacaacaaacatcataacaaaa 47024252  T
Q  212 caatagaaaaacataccctagtgagaacaagag 244  Q
    ||||||||||| ||||| ||| |||||||||||    
T  47024253 caatagaaaaatataccttagagagaacaagag 47024285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 31859315 - 31859446
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    |||||| |||||| |||| ||| ||| | ||||| |||||||||||||||||||| |||| |||||  | ||| | ||||||||||||||| ||||||||    
T  31859315 atccaaaaaataataaggggtttatcgtggaaccttaatcaaagaggtttagttgcacatgacaaccaatatcattacaaaacaatagaaagacataccc 31859414  T
Q  230 tagtgagaacaagaggatgatggagatcctct 261  Q
    |  |||||||||||||| |||| | |||||||    
T  31859415 tgatgagaacaagaggaggatgaaaatcctct 31859446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 18444910 - 18444770
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    ||||||||| | |||||| |||||||||||  |||||| | |||||||||||||||| ||||| |||  |||  || || ||||| | ||||||||| |     
T  18444910 tttattaattgaatccaaaaaataagaaggt-ttcatcgtggaaccctaatcaaagatgtttatttgctcatggcacca-acatcattacaaaacaacat 18444813  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcctc 260  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  18444812 aaaaacataccctaatgagaacaagaggaggatggagatcctc 18444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 18898709 - 18898588
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| |||| |||||||||  |||| |||||||||||||| ||||||||| ||||| ||||||| || || ||||||   || ||||||||||||     
T  18898709 aactgaatgaaaagtttattaataatatcaaacaaataagaaggggttcatcttggaaccataatcaa-gatgtctagttgcttatgacaacatacatca 18898611  T
Q  204 taacaaaacaatagaaaaacata 226  Q
    |||||||||||||||||||||||    
T  18898610 taacaaaacaatagaaaaacata 18898588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 22219409 - 22219294
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||| |||  |||| |||| |||  ||||||| || |||| |||    
T  22219409 aaaaactttattaataatatccaacaaataagaagg-gttcatcttggaaccctaatcaagagatttttatttgttcatggcaacataaatagtaaaaaa 22219311  T
Q  211 acaatagaaaaacatac 227  Q
     ||||||||||||||||    
T  22219310 gcaatagaaaaacatac 22219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 261
Target Start/End: Original strand, 39134190 - 39134339
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||| | |||| |||||||||||   ||||||| |  |||  |||||||||||||||| ||| |||| ||| || ||||| | | ||||    
T  39134190 aaaaactttattaattgaatcctacaaataagaaatggttcatcgtgaaactttaatcaaagaggtttatttgcacatgacatcaaacatcattataaaa 39134289  T
Q  212 caatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||||||||  ||  |||||||| |||| ||| ||||||||||    
T  39134290 caatagaaaaacatacattatagagaacaataggaggatagagatcctct 39134339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 9288637 - 9288565
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    ||||||||||||||| | ||||||||||||| |||| ||||||  ||||||| ||||||||||||||||||||    
T  9288637 aaaaactttattaattgaatccaacaaataataaggggttcattgtagaaccataatcaaagaggtttagttg 9288565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 33519744 - 33519606
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||| | ||  |||||||||||||| ||||| | |  ||||||||||||||||||||||||  | ||  ||||  ||||| | | || |    
T  33519744 aaaaactttattaattgaatttaacaaataagaaggggttcaacgtgaaaccctaatcaaagaggtttagttacatatggcaaccgacatcattataaga 33519645  T
Q  212 caatagaaaaacataccctagtgagaacaagaggatgat 250  Q
    ||||||||||| |||||| || |||||||| ||||||||    
T  33519644 caatagaaaaatatacccaagagagaacaaaaggatgat 33519606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 51885319 - 51885210
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    ||||| ||||||||||| ||||||| | ||| ||||||||| ||||||||||||| ||| |||||   |||| ||| ||||||| |||||||||||||||    
T  51885319 tccaataaataagaaggggttcatcgtggaaacctaatcaa-gaggtttagttgttcatgacaactggcatcataagaaaacaaaagaaaaacataccct 51885221  T
Q  231 agtgagaacaa 241  Q
    |  ||||||||    
T  51885220 acagagaacaa 51885210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 7023630 - 7023774
Alignment:
Q  114 aaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaac 212  Q
    ||||||||||||| | |||||||||||||||| | ||||||| | ||||| ||||||| ||||||||||||| ||||   |||  || || | |||||||    
T  7023630 aaactttattaattgaatccaacaaataagaatgggttcatcatggaaccataatcaagagaggtttagttgcacatggaaaccgacgtcattacaaaac 7023729  T
Q  213 aatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    || | |||||||||| |||| || ||| | |||| ||||||||||    
T  7023730 aacataaaaacatacactagagaaaacgaaaggaggatggagatc 7023774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 244
Target Start/End: Original strand, 17024322 - 17024461
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||||||||  |||| || ||||||||| | ||||||| | |||||||||| |||||||||||||||  |||   |||| |||||     
T  17024322 aactgaatgaaaactttattaataatatcaaaaaaataagaaagggttcatcatggaaccctaat-aaagaggtttagttgctcatggaaacaaacatca 17024420  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
    ||| ||| | ||||||||||||  ||||| |||||||||||    
T  17024421 taataaagctatagaaaaacatttcctagagagaacaagag 17024461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 21047878 - 21047790
Alignment:
Q  134 aacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaa 222  Q
    |||| ||||||| |||||||||||  ||||||||||||||||||||||||| ||||  ||||  ||||| | ||||||||||| |||||    
T  21047878 aacagataagaatgagttcatcttgaaaccctaatcaaagaggtttagttgcacatggcaaccaacatcattacaaaacaataaaaaaa 21047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 22120385 - 22120231
Alignment:
Q  104 aactaaataaaaa-ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    ||||||||||||| |||||||||| | |  ||||||||||||||| ||||||| |  ||||||||||||| ||| |||||||| |||   |||  |||||    
T  22120385 aactaaataaaaaactttattaattgaaaacaacaaataagaaggtgttcatcgtgaaaccctaatcaaataggcttagttgttcatggaaactgacatc 22120286  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
     |  ||||| |||| ||||||||||||||  || ||||| |||| |||| |||||    
T  22120285 attgcaaaataatataaaaacataccctaacgataacaaaaggaggatgtagatc 22120231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 12806377 - 12806488
Alignment:
Q  129 tatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacc 228  Q
    ||||||||||||| ||||| ||||||  | | ||||||||| | || |||||||||  ||| |||| | ||||| ||||||||||||||||||| ||| |    
T  12806377 tatccaacaaatacgaaggggttcattgtgggaccctaatcca-gaagtttagttgctcatgacaataaacatcataacaaaacaatagaaaaatatatc 12806475  T
Q  229 ctagtgagaacaa 241  Q
    |||| ||||||||    
T  12806476 ctagagagaacaa 12806488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 1001951 - 1001868
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaagg-----agttcatcttagaaccctaatcaaagaggtttagt 182  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||     | |||||| | |||||||||||||||| |||||||    
T  1001951 aactgaataaaaactttattaatggaatccaacaaattagaagggattcaattcatcgtggaaccctaatcaaagaagtttagt 1001868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 12110717 - 12110801
Alignment:
Q  98 aaatataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagtt 183  Q
    ||||||| || ||| ||||||||| |||| | ||||||||||||||  || ||||||||| ||||||| || ||||||||||||||    
T  12110717 aaatatacctgaatgaaaactttaataatagaatccaacaaataagttggggttcatcttggaaccctgat-aaagaggtttagtt 12110801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 17332039 - 17332184
Alignment:
Q  104 aactaaata-aaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacat 201  Q
    ||||||||| |||||||||| ||| | |||||| ||||||| ||  ||||||| | ||||||||||||| ||||||||||||  ||||   |||  ||||    
T  17332039 aactaaatacaaaactttatgaattgaatccaagaaataagtagaggttcatcatggaaccctaatcaagagaggtttagttacacatggtaactgacat 17332138  T
Q  202 cgtaacaaaacaat-agaaaaacataccctagtgagaacaagagga 246  Q
     || |||||||||| | ||||| || |||||| |||||||||||||    
T  17332139 agttacaaaacaataaaaaaaatattccctagagagaacaagagga 17332184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 20985007 - 20985086
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagtt 183  Q
    |||| ||| |||||||||||||  | | ||||||||||||||||  |||||| | |||||||||||||| ||||| ||||    
T  20985007 aactgaatgaaaactttattaaaagaacccaacaaataagaagggattcatcatggaaccctaatcaaataggttcagtt 20985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 27303415 - 27303364
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    ||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||    
T  27303415 tccaacaaataagaagg-gttcatcgtggaaccctaatc-aagaggtttagttg 27303364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 24041792 - 24041867
Alignment:
Q  99 aatataactaaataaa--aactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaa 172  Q
    ||||||||| ||||||  || ||||||||||   |||||||||||| |||  ||||||| ||||||||||||||||    
T  24041792 aatataactgaataaataaattttattaatgaattccaacaaataaaaagaggttcatcatagaaccctaatcaaa 24041867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 25314725 - 25314773
Alignment:
Q  193 aacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
    |||| ||||| ||| |||||||||||||||||||||||||  |||||||    
T  25314725 aacaaacatcataagaaaacaatagaaaaacataccctagacagaacaa 25314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 9504740 - 9504477
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    |||||||||||| | |  |||||| |||||||  || |||||||||||||||||||||||||||| |||  ||| |||||||||||| ||||||||||||    
T  9504740 tactaatctatacaaaccaattttaaagattaccgacacggattctcaattgaaaaagcattaagtacatgcaaaaacaaattaaatcggacacaagaaa 9504641  T
Q  101 ta--taactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacata 198  Q
     |  ||||| |||||||||||| ||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||  ||||| |    
T  9504640 aacataactgaataaaaactttgttaatggaatccaacaaataagaagggattcatcttagaaccataatcaaagaggtttagttgtacatggcaacaaa 9504541  T
Q  199 catcgtaacaaaacaatag-aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||| |||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||    
T  9504540 catcataacaaaacaatggaaaaaacataccctagagagaacaagaggaggatggagatcctct 9504477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 9516106 - 9515843
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    |||||||||||| | |  |||||| |||||||  || |||||||||||||||||||||||||||| |||  ||| |||||||||||| ||||||||||||    
T  9516106 tactaatctatacaaaccaattttaaagattaccgacacggattctcaattgaaaaagcattaagtacatgcaaaaacaaattaaatcggacacaagaaa 9516007  T
Q  101 ta--taactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacata 198  Q
     |  ||||| |||||||||||| ||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||  ||||| |    
T  9516006 aacataactgaataaaaactttgttaatggaatccaacaaataagaagggattcatcttagaaccataatcaaagaggtttagttgtacatggcaacaaa 9515907  T
Q  199 catcgtaacaaaacaatag-aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||| |||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||    
T  9515906 catcataacaaaacaatggaaaaaacataccctagagagaacaagaggaggatggagatcctct 9515843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 21842597 - 21842731
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| | ||||||    
T  21842597 aaaaactttattaattgaatccaacaaataagaatgagttcatcttggaaccctaatcaaagaggtttagttgtacatggcaacatacatcattacaaaa 21842696  T
Q  212 caatagaaaaacataccctagtgagaacaagagga 246  Q
    ||||| |||| |||||||||  |||||| ||||||    
T  21842697 caatataaaagcataccctaaagagaacgagagga 21842731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 261
Target Start/End: Original strand, 27416572 - 27416811
Alignment:
Q  23 tttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaacttt 120  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||     |||||| |||||||| ||||||||||||   |||||| |||| |||||||    
T  27416572 tttaagattattgatatggattatcaatcgaaaaagcattaagcatgtgaaagaacgaattaaatcggacacaagaaaatcataactcaatagaaacttt 27416671  T
Q  121 attaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaa 220  Q
    || ||| | ||||||||||||| |||| |||||| || ||||||||||| ||||||||||||   |||   ||||| ||||  || ||||||||||||||    
T  27416672 ataaattgaatccaacaaataataaggggttcatattggaaccctaatc-aagaggtttagtgtcacacggcaacaaacattataccaaaacaatagaaa 27416770  T
Q  221 aacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | ||||||  || ||||||||||||| ||||||||||||||    
T  27416771 agcatacctcagagagaacaagaggaggatggagatcctct 27416811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 21844226 - 21844358
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| | ||||||    
T  21844226 aaaaactttattaattgaatccaacaaataagaatgagttcatcttggaaccctaatcaaagaggtttagttgtacatggcaacatacatcattacaaaa 21844325  T
Q  212 caatagaaaaacataccctagtgagaacaagagga 246  Q
    ||  ||||||||| ||||||  |||||| ||||||    
T  21844326 ca--agaaaaacaaaccctaaagagaacgagagga 21844358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 18819390 - 18819243
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||  | |||||||||||||||||   ||||| | ||||||||||||||||||| ||||||  ||| |||||   |||| | ||||||    
T  18819390 aaaaactttattaattatttccaacaaataagaaggg--tcatcgtggaaccctaatcaaagaggtctagttgctcatgacaaccgtcatcattacaaaa 18819293  T
Q  212 caatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  18819292 caatagaaaaacataccctagtaagaacaagaggaggatagagatcctct 18819243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 257
Target Start/End: Original strand, 21503886 - 21504125
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaa 116  Q
    |||||| ||||||| | |||  |||||||| |||||| | |||||||  || ||||| ||||||||||| ||||||||||||   ||||||||||||||     
T  21503886 aattttcaagattactaatatagattctcagttgaaacatcattaagatcagacaagtacaaattaaatcggacacaagaaaagcataactaaataaaa- 21503984  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    |||||||||| | ||||| |||||||||| | ||||||||| ||| ||| |||||| |||||||||||  ||  |||||| ||||| | | |||| ||||    
T  21503985 ctttattaattgaatccatcaaataagaaagggttcatcttggaatcctgatcaaaaaggtttagttgctcacgacaacaaacatcattataaaataata 21504084  T
Q  217 gaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    |||||||||||  ||| | |||||| |||| |||| |||||    
T  21504085 gaaaaacatactttagagtgaacaataggaggatgaagatc 21504125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 14921484 - 14921619
Alignment:
Q  105 actaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgt 204  Q
    |||||||||||||||||||||| | |||||||||||||||| | |||||||   ||||||||||| ||||||||| ||||  |||  ||||  ||||| |    
T  14921484 actaaataaaaactttattaatagaatccaacaaataagaaag-gttcatcgaggaaccctaatcgaagaggttttgttgctcatggcaaccgacatcat 14921582  T
Q  205 aacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
     |||||||||| |||||||||||||||| ||||||||    
T  14921583 tacaaaacaattgaaaaacataccctagagagaacaa 14921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 25460641 - 25460486
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |  |||||| |  ||| ||||||||| |||||||||||  ||| | ||   | |||     
T  25460641 aactaaataaaaactttattaatagaatctaacaaataagaacgtattcatcgtgaaactctaatcaaataggtttagttgcgcatgaaaatcaaaatca 25460542  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    | |||||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  25460541 ttacaaaacaatagaaaaacatacactagagagaacaagaggatggtggatatcct 25460486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 261
Target Start/End: Original strand, 18235720 - 18235862
Alignment:
Q  119 ttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    |||||||| | |||||||||||||||||   |||||||||||| | ||||| | ||||||||||||  ||||  | ||||||||| || |||||||||||    
T  18235720 ttattaattgaatccaacaaataagaagagtttcatcttagaatcgtaatcgatagaggtttagtttcacatggctacatacatcata-caaaacaatag 18235818  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||| ||| ||||| |||| || ||||||||||||||    
T  18235819 aaaaacataccatagagagaataagaagaggatggagatcctct 18235862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 25474724 - 25474583
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||||||||    | ||||||||||||||| ||||||| | ||||| ||||||| ||||||||||||  |||  ||||| |||||     
T  25474724 aacttaatgaaaactttattaataaatttcaacaaataagaaggggttcatcgtggaaccataatcaa-gaggtttagttgctcatggcaacagacatca 25474626  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    ||||||||||||||||||| |||||||||  |||| |||||||    
T  25474625 taacaaaacaatagaaaaagataccctagaaagaataagagga 25474583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 20518659 - 20518806
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacat-tacaacatacatcgtaac 207  Q
    |||||||||||||||||| |  ||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||  |||  ||| || ||||| | ||    
T  20518659 aataaaaactttattaattgattccaa-aaataagaaggggttcatcgtagaaccctaatcaaggaggtttagttgctcatggacacca-acatcattac 20518756  T
Q  208 aaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    |||| ||||||||| |||||| ||| || || || |||||||||||||||    
T  20518757 aaaataatagaaaagcataccttagagaaaataaaaggatgatggagatc 20518806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 17883988 - 17884103
Alignment:
Q  135 acaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagt 233  Q
    |||||| |||||  |||||| || ||||||||||||| ||||||||||||| ||||  ||||  ||||| | |||||||||||||||||||||||||||     
T  17883988 acaaatgagaagaggttcatattggaaccctaatcaagagaggtttagttgcacatggcaaccaacatcattacaaaacaatagaaaaacataccctaga 17884087  T
Q  234 gagaacaagaggatga 249  Q
     || ||||||||||||    
T  17884088 aaggacaagaggatga 17884103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 27917437 - 27917555
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||||||||||||| |||||||||| |||||||||||| ||||| | ||| | | ||| |||||||||||| |||||||||  |||  ||||  |||||     
T  27917437 aactaaataaaaacattattaatggaatccaacaaataggaaggtgatcaacgttgaaacctaatcaaagaagtttagttgctcatggcaaccgacatca 27917536  T
Q  204 taacaaaacaatagaaaaa 222  Q
    | |||||||||||||||||    
T  27917537 ttacaaaacaatagaaaaa 27917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 261
Target Start/End: Complemental strand, 24188713 - 24188572
Alignment:
Q  120 tattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaa 219  Q
    ||||||| | |||||||||||||||||||||||||| | ||||| |||||||| |||||||||||  |||  ||||  || || |  ||||| |||||||    
T  24188713 tattaatagaatccaacaaataagaaggagttcatcatggaaccttaatcaaacaggtttagttgctcatggcaaccgacgtcatctcaaaataatagaa 24188614  T
Q  220 aaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||| ||||||| ||||| | ||| | |||| |||||||||    
T  24188613 aaacacaccctagagagaatatgagtaagatgaagatcctct 24188572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 35708458 - 35708374
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    ||||||||||||||| ||||||||| | ||||| ||||||| ||||||||||||  |||  ||||||||||| |||||||||||||    
T  35708458 tccaacaaataagaatgagttcatcgtggaaccttaatcaa-gaggtttagttgctcatggcaacatacatcataacaaaacaata 35708374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 41256774 - 41256886
Alignment:
Q  113 aaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaac 212  Q
    ||||||||||||||    ||||||||||||||| | ||||||| | ||||||||||| |||||||||| |||  ||  |||||||| ||| ||| |||||    
T  41256774 aaaactttattaataaattccaacaaataagaaagggttcatcgtggaaccctaatc-aagaggtttaattgctcacaacaacatatatcataagaaaac 41256872  T
Q  213 aatagaaaaacata 226  Q
    ||||||||||||||    
T  41256873 aatagaaaaacata 41256886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 1733765 - 1733694
Alignment:
Q  160 aaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctag 232  Q
    |||||||||||| ||||||||||||  ||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  1733765 aaccctaatcaa-gaggtttagttgctcatgacaacatacatcataacaaaacaaaagaaaaacatacactag 1733694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 18532962 - 18533060
Alignment:
Q  133 caacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctag 232  Q
    ||||||||||||||| ||| ||| | |||||||||| |||||||||||||||  |||  ||| | ||||| ||||||||||| ||||||| |||||||||    
T  18532962 caacaaataagaaggggtttatcgtggaaccctaat-aaagaggtttagttgctcatggcaatagacatcataacaaaacaaaagaaaaatataccctag 18533060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 16593198 - 16593291
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacat 225  Q
    ||||| ||||||||||| || |||| | ||||| ||| ||| ||||||||||||  |||| ||||| |||||  |||||||||||||||||||||    
T  16593198 tccaataaataagaaggggtacatcgtggaaccttaaccaa-gaggtttagttgctcattgcaacaaacatcaaaacaaaacaatagaaaaacat 16593291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 21847860 - 21847985
Alignment:
Q  107 taaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatc-aaagaggtttagttgtacattacaacatacatcgta 205  Q
    |||| |||||||||||||||   | |||| |||||| |||  ||||||||| ||||||||||| ||||||||||||||| | |   ||||  ||||| |     
T  21847860 taaaaaaaaactttattaattaaacccaaaaaataataagtggttcatcttggaaccctaatcaaaagaggtttagttgcataaggcaaccaacatcatc 21847959  T
Q  206 acaaaacaatagaaaaacataccctag 232  Q
    |||||||||||| ||||||||||||||    
T  21847960 acaaaacaatag-aaaacataccctag 21847985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 30999423 - 30999353
Alignment:
Q  171 aagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
    |||||||||||||   |||  ||||| ||||| ||| ||||||||||||||||||||||||| ||||||||    
T  30999423 aagaggtttagtttctcatggcaacaaacatcataagaaaacaatagaaaaacataccctagagagaacaa 30999353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 23909058 - 23909158
Alignment:
Q  107 taaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaa 206  Q
    ||||| ||||||||||||||    |||||||||||||||||  |||||| | ||||||| ||| ||||||||||||||  |||  ||||||||||| |||    
T  23909058 taaatgaaaactttattaataaattccaacaaataagaagggattcatcgtggaaccctgatc-aagaggtttagttgctcatggcaacatacatcataa 23909156  T
Q  207 ca 208  Q
    ||    
T  23909157 ca 23909158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 22511562 - 22511490
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    ||||||||||||||||| ||| ||||||||| || | |||| || | |||||||||||||| | |||||||||    
T  22511562 aaaaactttattaatggaatctaacaaataataaagggttcttcatggaaccctaatcaaataagtttagttg 22511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 24048033 - 24047938
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaa-agagg--tttagttgtacattacaacatacatcgtaacaaaacaatagaaaaa 222  Q
    ||||||||||||||||  |||||||||| ||||| ||||||| |||||  |||||||| |||| |||||  ||||| | ||||| ||||| |||||    
T  24048033 atccaacaaataagaataagttcatcttggaaccataatcaagagaggtttttagttgcacatgacaaccgacatcattacaaagcaataaaaaaa 24047938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 31274452 - 31274412
Alignment:
Q  206 acaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    ||||||||||||||||| |||| |||| |||||||||||||    
T  31274452 acaaaacaatagaaaaatatactctagagagaacaagagga 31274412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 11769310 - 11769552
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaata-taactaaataaaaac 117  Q
    |||||| |||||||  |||||| |||||||| |||||| |||||||||||| ||||||| ||||||||| |||||||||||| | ||||| |||| ||||    
T  11769310 aattttcaagattaccgatacgaattctcaaatgaaaa-gcattaagcacagacaagaaaaaattaaatcggacacaagaaaaaataacttaatagaaac 11769408  T
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    ||||||||| | |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||   ||||| |||| |||||||||||||     
T  11769409 tttattaattgaatccaacaaataagaaggggttcatcttagaaccctaataaaaaaggtttagttgcacatggaaacattcatcataacaaaacaatat 11769508  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||| ||| ||| ||||| ||||||| ||||||||||||||    
T  11769509 aaaaacacaccatagagagaaaaagaggaggatggagatcctct 11769552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 11984509 - 11984771
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    |||||||||||| |||  |||||| |||||||| |||||| ||| |||||||||||| ||||||||||  | |||||||||||||||  |||||||||||    
T  11984509 tactaatctatacagaccaattttcaagattatcgatacgaattttcaattgaaaaaacattaagcacggaaaagaacaaattaaatcagacacaagaaa 11984608  T
Q  101 ta--taactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacata 198  Q
        ||| | ||||||||||| |||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||  |||||||    
T  11984609 agcgtaaatgaataaaaacttaattaatggaatccaacaaataagaaggggtttatctttgaaccctaatcaaagaggtttagttgcacatggcaacata 11984708  T
Q  199 catcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||| |  |||||||| ||||||| ||| | ||| ||||||||||||| ||||||||||||||    
T  11984709 catcatcgcaaaacaaaagaaaaatatatcttagagagaacaagaggaggatggagatcctct 11984771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 258
Target Start/End: Complemental strand, 50047905 - 50047654
Alignment:
Q  9 tataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataac 106  Q
    |||| |||| |||||| ||||||| | ||||  |||||||||||||||| | |||||||||  |||||||||||||||  || |||||||||   |||||    
T  50047905 tatacagatcaattttcaagattactaatacaaattctcaattgaaaaaac-ttaagcacatgcaagaacaaattaaaccgggcacaagaaaatcataac 50047807  T
Q  107 taaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaac-atacatcgta 205  Q
    |||||| ||||||||||||| | |||||||||||||||||| |||||||||| ||| |||||||||||||||||||||  |||  |||| | ||||| |     
T  50047806 taaatagaaactttattaattgaatccaacaaataagaaggggttcatcttataactctaatcaaagaggtttagttgctcatggcaacaaaacatcatt 50047707  T
Q  206 acaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcc 258  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  50047706 acaaaacaatataaaaacataccctagagagaacaagaggaggatggagatcc 50047654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 261
Target Start/End: Complemental strand, 34533391 - 34533194
Alignment:
Q  66 cacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaacc 163  Q
    ||||| ||||||| |||||||| ||||||||||||   |||||| |||| ||| ||||||||| | |||||||||||||||||| || ||||||||||||    
T  34533391 cacaagcaagaacgaattaaatcggacacaagaaaagcataactgaatataaattttattaattgaatccaacaaataagaaggggtccatcttagaacc 34533292  T
Q  164 ctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||||||||||||| |||| || ||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||    
T  34533291 ctaatcaaagaggtttagttgcacatgacgacaaacatcataccaaaacaatcgaaaaacataccctagagagaacaagaggaggatgaagatcctct 34533194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 23224143 - 23223942
Alignment:
Q  61 ttaagcacaaacaagaacaaattaaatt-ggacacaagaaat--ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatctt 157  Q
    ||||||||| |||||||| | ||||||| ||||||||||||   |||||| |||| ||||||||||||  | || ||||| ||||||||| |||||||||    
T  23224143 ttaagcacagacaagaactatttaaatttggacacaagaaaagcataactgaatagaaactttattaactgaatgcaacatataagaaggggttcatctt 23224044  T
Q  158 agaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    ||||||| ||||||||||||||| ||   ||| |||||||||||| | ||||||||||||||||||||||||||  |||||| |||||| |||| |||||    
T  23224043 agaacccaaatcaaagaggtttatttccgcatgacaacatacatcattacaaaacaatagaaaaacatacccta--gagaactagaggaggatgaagatc 23223946  T
Q  258 ctct 261  Q
    ||||    
T  23223945 ctct 23223942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 18300346 - 18300556
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaata--taactaaataaaa 115  Q
    |||||| |||||||| ||| | |||||| |||||||||||||||||| ||| ||||| || |||| ||||||||| ||||||| |  ||||| ||| |||    
T  18300346 aattttcaagattatcgatgcagattctaaattgaaaaagcattaagaacatacaagtacgaatttaaattggacccaagaaaaacataactgaatgaaa 18300445  T
Q  116 actttattaa-tggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttag-ttgtacattacaacatacatcgtaacaaaaca 213  Q
    |||||||||| | | || ||||||||||||||| ||||||||||||||||||| ||||||| ||||| || | |||  ||||||||||| ||||||||||    
T  18300446 actttattaaattgaattcaacaaataagaaggggttcatcttagaaccctaagcaaagagttttagttttttcatggcaacatacatcataacaaaaca 18300545  T
Q  214 atagaaaaaca 224  Q
    |||||||||||    
T  18300546 atagaaaaaca 18300556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 259
Target Start/End: Complemental strand, 30676148 - 30675992
Alignment:
Q  102 ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacat 201  Q
    |||||| ||| |||||||||||||| | |||||||||||||||||| ||||||||| ||||| ||||||| || ||| |||||  |||  ||||| ||||    
T  30676148 ataactgaatgaaaactttattaattgaatccaacaaataagaaggggttcatcttcgaaccttaatcaa-gaagttaagttgctcatggcaacaaacat 30676050  T
Q  202 cgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    | ||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  30676049 cataacaaaacaatagaaaaacataccctagagagactaagaggaggatggagatcct 30675992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 21549367 - 21549213
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||  |||||| | |||||||||   ||||| ||||||||| ||| ||| |  |||||     
T  21549367 aactgaataaaaactgtattaatagaatccaacaaataagaagggtttcatcgtggaaccctaa---aagagatttagttgttcatgacagccgacatca 21549271  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21549270 ttacaaaacaatagaaaaacataccctagagagaacaagaggaggatggagatcctct 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 19257371 - 19257489
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    ||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||| |||||  ||||| | ||||||||||||    
T  19257371 tttattaattgaatccaacaaataagaaggggttcatcttggaaccctaatcaaagaggtttagttgctcatgacaaccgacatcattacaaaacaatag 19257470  T
Q  218 aaaaacataccctagtgag 236  Q
    ||||||||||| |||||||    
T  19257471 aaaaacataccatagtgag 19257489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 12810879 - 12810735
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||||  |||  ||||| || ||     
T  12810879 aactgaatgaaaactttattaattatatccaacaaataagaaggagttcatcatggaaccctaatc-aagaggttttgttgctcatggcaacaaacgtca 12810781  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatga 249  Q
    |||||||| ||||||||| |||||||||  ||||||||||| ||||    
T  12810780 taacaaaataatagaaaagcataccctaaagagaacaagagaatga 12810735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 14744865 - 14744992
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    |||||| |||||||||  |||||||||| |||||||| ||||||||||||||||| |||| |||||  ||||| | ||||||||||||||||||||| |     
T  14744865 atccaataaataagaaaaagttcatcttggaaccctagtcaaagaggtttagttgcacatgacaaccgacatcattacaaaacaatagaaaaacatatca 14744964  T
Q  230 tagtgagaacaagaggatgatggagatc 257  Q
    ||| |||||||||| || |||| |||||    
T  14744965 tagagagaacaagaagaggatgcagatc 14744992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 15298273 - 15298407
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataag-aaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||   ||||||||||||||| ||||| |||||| | |   | |||||||||||||||||||| |||| | |||||||||| | |||||    
T  15298273 aaaaactttattaaatctatccaacaaataaggaagga-ttcatcgtggttacttaatcaaagaggtttagttgcacatgataacatacatcattacaaa 15298371  T
Q  211 acaatagaaaaacataccctagtgagaacaagagga 246  Q
    |||| |||||| |||||||||| |||||||||||||    
T  15298372 acaaaagaaaagcataccctagagagaacaagagga 15298407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 26658209 - 26658065
Alignment:
Q  104 aactaaat-aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    |||||||| |||||||||||||||  | |||| |||||||||||  ||||||| |  |||| ||||||| ||||||||||||  ||| |||||| |||||    
T  26658209 aactaaatgaaaaactttattaataatgtccaccaaataagaagacgttcatcatgaaaccttaatcaa-gaggtttagttgctcatgacaacaaacatc 26658111  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaagaggatga 249  Q
      |||||||||||| ||||||||||||||| ||||||||||| ||||    
T  26658110 acaacaaaacaata-aaaaacataccctagagagaacaagagaatga 26658065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 31314258 - 31314109
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||| | |||||||||| ||||||  | ||||||| ||||||||||||| ||||||||| ||  |||| | |||| ||||| | || ||    
T  31314258 aaaaactttattaattgaatccaacaaacaagaagaggctcatcttggaaccctaatcaagagaggtttattttcacatgaaaacaaacatcattac-aa 31314160  T
Q  211 acaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||||||||||| ||| ||| |||||||||| |  ||||||||||||||    
T  31314159 acaatagaaaaacaaaccatagagagaacaagatggggatggagatcctct 31314109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 52270619 - 52270770
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggag-ttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaac 207  Q
    |||||||||||||||||  | |||||| ||||||||||| | |||||| | |||||||||||||| | ||||||||   |||  ||||  ||||| | ||    
T  52270619 aataaaaactttattaaaagaatccaaaaaataagaagggggttcatcgtggaaccctaatcaaataagtttagtttctcatggcaaccgacatcattac 52270718  T
Q  208 aaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    ||||||||||||||||||   |||| ||||||||||||| |||| |||||||    
T  52270719 aaaacaatagaaaaacatcatctagagagaacaagaggaggatgaagatcct 52270770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 25778390 - 25778300
Alignment:
Q  171 aagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||||||| ||| |||| |||||| | ||| | ||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||    
T  25778390 aagaggtttaattgcacataacaacaaatatcattacaaaacaatagaaaaacataccctagagagaacgagaggaggatggagatgctct 25778300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9328718 - 9328591
Alignment:
Q  102 ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacat 201  Q
    |||||| ||| |||||||| ||||| | |||||||||||||||| | ||||||||| || || |||||||| |||||||||||  |||   || ||||||    
T  9328718 ataactgaatgaaaacttt-ttaatagaatccaacaaataagaaagggttcatcttcgagccataatcaaa-aggtttagttgctcatggaaatatacat 9328621  T
Q  202 cgtaacaaaacaatagaaaaacatacccta 231  Q
    |  |||||||||||||||||||||||||||    
T  9328620 cacaacaaaacaatagaaaaacatacccta 9328591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 23506442 - 23506343
Alignment:
Q  159 gaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcc 258  Q
    |||||||||| ||||| ||||||||| |||| || ||  ||||| | |||||||||||||||||||| | |||| ||||| ||||||| |||||||||||    
T  23506442 gaaccctaataaaagatgtttagttgcacataactacgaacatcattacaaaacaatagaaaaacattctctagagagaataagaggaggatggagatcc 23506343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 241
Target Start/End: Original strand, 15416441 - 15416570
Alignment:
Q  113 aaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||| | | |||||||||||||| ||  ||||||| | |||||||||| || ||||||||||||  |||| |||||  ||||| | ||||||    
T  15416441 aaaactttattagttgaatccaacaaataagtagaggttcatcgtggaaccctaattaatagaggtttagttacacatgacaaccgacatctttacaaaa 15416540  T
Q  212 caatagaaaaacataccctagtgagaacaa 241  Q
    ||| |||||||||||||  || ||||||||    
T  15416541 caagagaaaaacataccaaagagagaacaa 15416570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 23519139 - 23519270
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||   ||| |||||||||||| | ||||| ||||||||| |||| || |||||||||||   |||   |||| ||||| ||||||||    
T  23519139 aaaaactttattaataagatcaaacaaataagaaagggttcaccttagaaccataattaa-gaggtttagtttctcatggtaacaaacatcataacaaaa 23519237  T
Q  212 caatagaaaaacataccctagtgagaacaagag 244  Q
    |||||||||||||||  |||  |||||||||||    
T  23519238 caatagaaaaacatagtctaaagagaacaagag 23519270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 25665189 - 25665261
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    ||||||||||| ||| | || ||||||||||||||| ||||||| | ||||| ||||||||||||||||||||    
T  25665189 aaaaactttatcaatagaattcaacaaataagaaggggttcatcgtggaaccttaatcaaagaggtttagttg 25665261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 30782411 - 30782294
Alignment:
Q  95 aagaaatataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaa 194  Q
    |||||||| |||| ||||||||||||||||||    ||||||||||||||||| | ||||| | ||||| ||||| |||| |||||||||  ||| ||||    
T  30782411 aagaaata-aactgaataaaaactttattaataaattccaacaaataagaaggggctcatcctggaaccttaatc-aagatgtttagttgctcatgacaa 30782314  T
Q  195 catacatcgtaacaaaacaa 214  Q
    |||||||  |||||||||||    
T  30782313 catacataataacaaaacaa 30782294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 9252085 - 9252182
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacc 228  Q
    |||||||||||||||||| |||||||||  ||||| |||| ||||||||||||||  |||   |||| |||||  || |||||||||||||||||||||    
T  9252085 atccaacaaataagaaggggttcatcttcaaacccaaatc-aagaggtttagttgctcatggaaacagacatctcaaaaaaacaatagaaaaacatacc 9252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 23521135 - 23521204
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagt 182  Q
    |||||||||||||||   |||||||||||||||||  ||||||||| ||||||||||| ||||||||||||    
T  23521135 aaaaactttattaataagatccaacaaataagaagaggttcatcttggaaccctaatc-aagaggtttagt 23521204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 26853748 - 26853853
Alignment:
Q  137 aaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgag 236  Q
    |||||| |||| ||||||| ||||||| |||||||||||||||| ||| ||| | ||||||| ||| | | ||||||||| |||||||||| |||| |||    
T  26853748 aaataaaaaggggttcatcgtagaaccataatcaaagaggtttacttgcaca-tgcaacatagatcattataaaacaatataaaaacatactctagagag 26853846  T
Q  237 aacaaga 243  Q
     ||||||    
T  26853847 gacaaga 26853853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9353681 - 9353554
Alignment:
Q  102 ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacat 201  Q
    |||||| ||| |||||||| ||||| | || ||||||||||||| | ||||||||| || ||  ||||||| |||||||||||  |||   || ||||||    
T  9353681 ataactgaatgaaaacttt-ttaatagaattcaacaaataagaaagggttcatcttcgagccacaatcaaa-aggtttagttgctcatggaaatatacat 9353584  T
Q  202 cgtaacaaaacaatagaaaaacatacccta 231  Q
    |  |||||||||||||||||||||||||||    
T  9353583 cacaacaaaacaatagaaaaacatacccta 9353554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 34521690 - 34521642
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagca 67  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  34521690 aattttcaagattatcgatacggattctcacttgaaaaagcattaagca 34521642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 24903227 - 24903278
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagtt 183  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||||||||||||    
T  24903227 tccaacaaataagaaggggttcatcatggaaccctaatc-aagaggtttagtt 24903278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 25731096 - 25731041
Alignment:
Q  206 acaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||| ||||||||||||||| ||||||  ||||| |||| |||||||||    
T  25731096 acaaaacaatataaaaacataccctagagagaacgggaggaggatgaagatcctct 25731041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 25778421 - 25778387
Alignment:
Q  110 ataaaaactttattaatggtatccaacaaataaga 144  Q
    ||||||||||||||||||| |||||||||||||||    
T  25778421 ataaaaactttattaatggaatccaacaaataaga 25778387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 17837314 - 17837355
Alignment:
Q  46 tcaattgaaaaagcattaagcacaaacaagaacaaattaaat 87  Q
    ||||||||||||||||||||||||  ||||||| ||||||||    
T  17837314 tcaattgaaaaagcattaagcacatgcaagaacgaattaaat 17837355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 19263175 - 19263438
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    |||||||||| | |||  |||||||| |||||  ||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  19263175 tactaatctaaacagaccaatttttatgattaccgatacggattctcgattgaaaaagcattaagcacagacaagaacgaattaaatcggacacaagaaa 19263274  T
Q  101 t--ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacata 198  Q
       |||||| ||||||||| |||||| | | |||||||||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||| | |    
T  19263275 agcataactgaataaaaacattattactagaatccaacaaataagaagaggttcatcttagaaccctaatcaaagaggtgtagttgcacattacaaaaaa 19263374  T
Q  199 catcgtaacaaaacaatagaaaaa-cataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||| ||||| |||||| ||||||  |||| |||| ||||| ||||||| | || |||||||||    
T  19263375 catcataacagaacaatggaaaaaggatactctagagagaaaaagaggagggtgaagatcctct 19263438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 19218500 - 19218745
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa--tataactaaataaaaa 116  Q
    ||||||||||||||  |||||  ||| |||||||||| ||| ||||||||| ||||||||  ||||||| ||||||||||||  ||||||| ||||||||    
T  19218500 aatttttaagattaccgatacaaattatcaattgaaagagcgttaagcacagacaagaacggattaaatcggacacaagaaaaatataactgaataaaaa 19218599  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
      |||||||||| ||||||||||||||||    ||||| ||||||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||    
T  19218600 aattattaatggaatccaacaaataagaaaagcttcatgttagaaccctaatcaaagaggtttagttgcacatgacaacatacttcataacaaaacaata 19218699  T
Q  217 gaaaaa-cataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||  |||| |||| ||||||||||||| ||||||||| ||||    
T  19218700 gaaaaaggatactctagagagaacaagaggaggatggagatactct 19218745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 253
Target Start/End: Complemental strand, 10342538 - 10342328
Alignment:
Q  45 ctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaata--taactaaataaaaactttattaatggtatccaacaaataa 142  Q
    ||||||| |||||||||||| ||||  ||||||  |||| ||| |||||||||||| |  ||| ||||| |||| ||||||| | | | |||||||||||    
T  10342538 ctcaattaaaaaagcattaaacacatgcaagaatgaattgaataggacacaagaaaaacataagtaaatgaaaaatttattatttgaaaccaacaaataa 10342439  T
Q  143 gaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaag 242  Q
    ||||| ||||||||||||||||||| ||||||||| |||||   ||| |||||||||||| |||||||| |||||||||| ||||||||| |||||||||    
T  10342438 gaaggtgttcatcttagaaccctaaccaaagaggtgtagtttctcatgacaacatacatcataacaaaataatagaaaaatataccctagagagaacaag 10342339  T
Q  243 aggatgatgga 253  Q
    |||| ||||||    
T  10342338 aggaggatgga 10342328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 14280683 - 14280840
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| |||||||||||||||||| | |||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||   ||  ||||  ||| |     
T  14280683 aactgaataaaaactttattaatagaatccaacaaataagaaggggttcatcgtggaaccttaatcaaagaggtttagttgcttatggcaaccgacacca 14280782  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | ||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  14280783 ttacaaagcaatagaaaaacataccctagagagaacaagaggaggatgtagatcctct 14280840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 8401807 - 8401955
Alignment:
Q  113 aaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaac 212  Q
    |||||||||||||| | |||||||||||||||||| ||||||| | |||||||||| ||| | ||||||||| ||||  ||||  ||||  | |||||||    
T  8401807 aaaactttattaattgaatccaacaaataagaaggggttcatcgtggaaccctaataaaaaaagtttagttgcacatggcaaccgacattattacaaaac 8401906  T
Q  213 aatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||| ||||||||||||||| || |||||||||| |||| |||||||||    
T  8401907 aatataaaaacataccctagagataacaagaggaggatgaagatcctct 8401955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 26419471 - 26419315
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaat-caaagaggtttagttgtacattacaacatacatc 202  Q
    |||| ||| |||||||| ||||| | |||||||||||||||||| ||||||| | ||||| |||| |||||| ||||||||| ||||  ||||  |||||    
T  26419471 aactgaatgaaaacttttttaattgaatccaacaaataagaaggggttcatcgtggaaccgtaatacaaagatgtttagttgcacatggcaaccaacatc 26419372  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
     | |||||||||||||||||||||||||| ||| ||||||||||  ||| |||||||    
T  26419371 attacaaaacaatagaaaaacataccctaatgaaaacaagaggagaatgaagatcct 26419315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 246
Target Start/End: Complemental strand, 27415840 - 27415697
Alignment:
Q  102 ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacat 201  Q
    |||||| ||| |||||||||| ||| | |||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||   |||  ||| |||||     
T  27415840 ataactgaatgaaaactttataaattgaatccaacaaataagaaggggttcatcttagaa-cctaatcgaagcggtttagttactcatggcaatatacac 27415742  T
Q  202 cgtaacaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    | ||||||||||||||||||| |||||| || |||||||||||||    
T  27415741 cataacaaaacaatagaaaaagataccccagagagaacaagagga 27415697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 2729000 - 2729124
Alignment:
Q  115 aactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaa 214  Q
    |||||||||||| | ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||  ||    ||||| ||||||||||     
T  2729000 aactttattaattgaatccaacaaataaaatggagttcatcttataaccctaatcaaagaggtttagttgttcatggca----acatcataacaaaacag 2729095  T
Q  215 tagaaaaacataccctagtgagaacaaga 243  Q
    |||||||| ||||| ||| ||||||||||    
T  2729096 tagaaaaatataccatagagagaacaaga 2729124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 22488268 - 22488414
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||| | ||||| ||||| |||| ||||||||   ||| | |||  ||||| | |||    
T  22488268 aataaaaactttattcatggaatccaa-aaataagaaggagttcatcgtggaaccataatcgaagaagtttagtttctcatgaaaaccgacatcattaca 22488366  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagaggatgatggagat 256  Q
    ||||||| |||||||||| ||||| ||||||||||||| |||||||||    
T  22488367 aaacaattgaaaaacatatcctagagagaacaagaggaggatggagat 22488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 261
Target Start/End: Original strand, 19542490 - 19542642
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    ||||||||| ||||||||   |||||||||| || |||| ||||||| | ||||||||||||||||| ||||||||| ||| | |||| ||||| | | |    
T  19542490 aataaaaacattattaatacaatccaacaaaaaataaggggttcatcgtggaaccctaatcaaagagatttagttgttcataaaaacaaacatcattata 19542589  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||  | |||||||| ||||||||| ||||||||||||| ||||||||| ||||    
T  19542590 aactagtagaaaaatataccctagagagaacaagaggaggatggagatactct 19542642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 11475578 - 11475439
Alignment:
Q  104 aactaaataaaaa-ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    ||||||||||||| |||||||||||| || ||| |||||| |||| ||||||| | |||||||||| | ||||||||||||| | ||  ||||||| |||    
T  11475578 aactaaataaaaaactttattaatggaatacaaaaaataacaaggggttcatcgtggaaccctaattagagaggtttagttgcagatggcaacatatatc 11475479  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaag 242  Q
     | ||||||||||| ||||||||||| ||| |||||||||    
T  11475478 attacaaaacaatataaaaacataccttagagagaacaag 11475439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 25918573 - 25918673
Alignment:
Q  2 actaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat 101  Q
    |||||||||||  ||| |||||| |||||||  |||||||||||||||||||||||||||||||||||  ||||||| |||||||  |||||||| ||||    
T  25918573 actaatctatacggatcaattttcaagattaccgatacggattctcaattgaaaaagcattaagcacaggcaagaacgaattaaaacggacacaaaaaat 25918672  T
Q  102 a 102  Q
    |    
T  25918673 a 25918673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 16977026 - 16976897
Alignment:
Q  41 gattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaag--aaatataactaaataaaaactttattaatggtatccaacaa 138  Q
    |||||||||||||||||| |||| | ||| ||||| |||||||||||  ||||||||  ||| |||||||||| |||| ||||||||| | |||||||||    
T  16977026 gattctcaattgaaaaagaattatgaacagacaagtacaaattaaataagacacaagaaaaacataactaaatgaaaaatttattaattgaatccaacaa 16976927  T
Q  139 ataagaaggagttcatcttagaaccctaat 168  Q
    ||||||| |  || || |||||||||||||    
T  16976926 ataagaatggatttatgttagaaccctaat 16976897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 28731053 - 28731142
Alignment:
Q  137 aaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacata 226  Q
    ||||||||||| |||||||   ||||||||||||||||||||||| |  |||| |||||||||||| | |||||||||||||||||||||    
T  28731053 aaataagaaggggttcatcgcggaaccctaatcaaagaggtttagctacacatgacaacatacatcattacaaaacaatagaaaaacata 28731142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 33913943 - 33914137
Alignment:
Q  53 aaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaat--ataactaaataaaaactttattaatggtatccaacaaataagaaggag 149  Q
    ||||||||||||| |||||||| ||| |||| |||| | ||||||||||   | |||| ||| |||||||||||||| |  || |||||||||||||| |    
T  33913943 aaaaagcattaagaacaaacaaaaactaatttaaatagaacacaagaaaagcaaaactgaatgaaaactttattaatagattcgaacaaataagaagg-g 33914041  T
Q  150 ttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    ||||||||  || ||||||||| ||||||||||||  | |  ||||| |||| ||||||||||| || ||||||||||||||   ||||||||||||    
T  33914042 ttcatcttgaaagcctaatcaa-gaggtttagttgctcgtggcaacaaacattgtaacaaaacattataaaaacataccctaaaaagaacaagagga 33914137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 18066334 - 18066248
Alignment:
Q  160 aaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    |||||||||||||||||||||||||  ||| |||| |||| || ||||||||||||||||||| |||| |||  |||||||||||||    
T  18066334 aaccctaatcaaagaggtttagttgctcatgacaatatacgtcataacaaaacaatagaaaaagatactctatagagaacaagagga 18066248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 18474925 - 18474767
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataag-aaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    |||| ||||||||| ||||||||   |||||||||| ||  |||| ||||||| | ||||| ||||||||||||||||||||  ||| | |||| |||||    
T  18474925 aactgaataaaaacattattaatacaatccaacaaaaaaataaggggttcatcgtggaaccataatcaaagaggtttagttgctcataaaaacagacatc 18474826  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
     | ||||| ||||||||||| | ||||| | ||||| ||||||| ||||||||| ||||    
T  18474825 attacaaaccaatagaaaaataaaccctggagagaataagaggaggatggagatactct 18474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 21018317 - 21018179
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttc-atcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaac 207  Q
    |||| |||||||||| || |  |||||||||||| ||||| ||  ||||||||| ||||||||||||||||||| ||| |||   |||| ||||| ||||    
T  21018317 aatataaactttattgattgagtccaacaaataaaaaggatttatatcttagaaacctaatcaaagaggtttagctgttcatggaaacaaacatcataac 21018218  T
Q  208 aaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    | ||||||||||||||||| || ||  ||||||||||||    
T  21018217 ataacaatagaaaaacatatcccagacagaacaagagga 21018179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 259
Target Start/End: Original strand, 21828593 - 21828750
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||||||||  |||||||| | |||| | ||||||||||  ||||||| | ||||| | |||||||||||||||||| ||||  ||||  |||||     
T  21828593 aactgaataaaaaaattattaattgaatcccaaaaataagaagaggttcatcatggaaccttgatcaaagaggtttagttgcacatggcaactgacatca 21828692  T
Q  204 taacaaaacaatag--aaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    | || |||||||||  ||||| || |||||| ||||||||||||| ||||||||||||    
T  21828693 ttaccaaacaatagaaaaaaaaattccctagagagaacaagaggaagatggagatcct 21828750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 165
Target Start/End: Complemental strand, 13912086 - 13911950
Alignment:
Q  35 gatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa------tataactaaataaaaactttattaatgg 128  Q
    |||||||||||| |||||||||| ||||||  ||| || || |||||||||||||||||||| |||       |||||||||| |||||||||||||| |    
T  13912086 gatacggattctaaattgaaaaaccattaaaaacagactagtacaaattaaattggacacaaaaaaaaaaagaataactaaatgaaaactttattaattg 13911987  T
Q  129 tatccaacaaataagaaggagttcatcttagaaccct 165  Q
     ||||| | |||||||| | ||||||||| |||||||    
T  13911986 aatccagctaataagaaagggttcatcttggaaccct 13911950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 21806195 - 21806099
Alignment:
Q  131 tccaacaaataagaagga---gttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatac 227  Q
    |||||||||||||||||    ||| ||||||||||||||| |||||||||||||||| |||| |||||||||||| | ||   |||||||||||||||||    
T  21806195 tccaacaaataagaaggccgggttaatcttagaaccctaaccaaagaggtttagttgcacatgacaacatacatcattac---acaatagaaaaacatac 21806099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 25883711 - 25883651
Alignment:
Q  171 aagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacccta 231  Q
    ||||||||||||||  |||  |||||||||| |||||||||||||||||||||||||||||    
T  25883711 aagaggtttagttgctcatggcaacatacatagtaacaaaacaatagaaaaacatacccta 25883651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 5632016 - 5632087
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagtt 183  Q
    |||||||||||||| || |||||||||||||||| | ||| ||| | |||||||||||||||| ||||||||    
T  5632016 aaaaactttattaacggaatccaacaaataagaaagggtttatcgtggaaccctaatcaaagaagtttagtt 5632087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 23907685 - 23907762
Alignment:
Q  107 taaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatc-aaagaggtttagtt 183  Q
    |||||| |||||||||||||   |||||||||||||| || |||||||| | ||||||||||| ||||||||||||||    
T  23907685 taaatacaaactttattaattaaatccaacaaataagtagaagttcatcgttgaaccctaatcaaaagaggtttagtt 23907762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 11521871 - 11521775
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacc 228  Q
    ||||||||||||||  ||||||| | | || |||||||||| ||||||||||||  |||  ||||| ||||| ||| ||||||||| |||||||||||    
T  11521871 tccaacaaataagatcgagttcaacatggatccctaatcaa-gaggtttagttgctcatggcaacagacatcataaaaaaacaatataaaaacatacc 11521775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13911924 - 13911873
Alignment:
Q  193 aacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
    |||||||||| || ||||||||||||||| |||||||||  |||||||||||    
T  13911924 aacatacatcatatcaaaacaatagaaaaccataccctatagagaacaagag 13911873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 24121063 - 24120823
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaa 116  Q
    ||||||||| ||||| ||||| ||||||||||||||||| ||||||| |||  |||| |||||||||||  ||||||||||||  |||||| ||| ||||    
T  24121063 aatttttaa-attatcgatacagattctcaattgaaaaaacattaagaacatgcaagtacaaattaaatctgacacaagaaattgataactgaatgaaaa 24120965  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
     ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||  |||  ||||||||||| | |  |||||||     
T  24120964 ttttattaatggaatccaacaaataagaaggagttcatcttggaaccctgatcaaagaggtttagttg--catggcaacatacatcattaacaaacaat- 24120868  T
Q  217 gaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
     ||||| ||||| ||| ||||||||||||| ||| ||||||||||    
T  24120867 taaaaaaataccgtagagagaacaagaggaggatagagatcctct 24120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 32240070 - 32239837
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaata--taactaaataaaaa 116  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||| | |||||||| |||||| | | |||||||||| |  |||   |||| |||    
T  32240070 aattttcaagattactgatacggattctcaattaaaaaagcattaagcatagacaagaacgaattaactcgaacacaagaaaaacataatcgaatataaa 32239971  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    |||||||||| | |||||||||||||||||  |||||||||| |||||||||| ||||||||||||||  ||  |||||| ||||| ||||||| |||||    
T  32239970 ctttattaattgaatccaacaaataagaagaggttcatcttaaaaccctaatc-aagaggtttagttgctcacaacaacagacatcataacaaatcaata 32239872  T
Q  217 gaaaaacataccctagtgagaacaagaggatgatg 251  Q
    ||||||||| | ||||  |||||||||||| ||||    
T  32239871 gaaaaacatgctctagaaagaacaagaggaggatg 32239837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 261
Target Start/End: Original strand, 30850451 - 30850604
Alignment:
Q  108 aaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaac 207  Q
    |||||||||  |||||||  | ||| || |||||||||||||||||||||  |||| |||||||||||||||||||| |||| |||||  ||| | | ||    
T  30850451 aaataaaaatattattaaatgaatcaaaaaaataagaaggagttcatcttgaaaccttaatcaaagaggtttagttgcacatgacaactaacaacattac 30850550  T
Q  208 aaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  30850551 aaaacaatagaaaaacataccctagagagaacaataggaggatggagatcctct 30850604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 12957224 - 12957076
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    |||| ||||||||||||||  ||||||||||||||||||  ||||| |||||| |||||||||||||||||||||| ||||   || | ||||| |||||    
T  12957224 aatacaaactttattaatgaaatccaacaaataagaaggcattcattttagaatcctaatcaaagaggtttagttgcacatggtaataaacatcataaca 12957125  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    ||||| |||||||||||||||||  |||||||||| ||||||| |||||    
T  12957124 aaacattagaaaaacataccctatagagaacaagatgatgatgaagatc 12957076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 256
Target Start/End: Complemental strand, 24094932 - 24094725
Alignment:
Q  50 ttgaaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaatata-actaaataaaaactttattaatggtatccaacaaataagaagg 147  Q
    |||||||||||||||| ||| |||||||| |||| ||||| |||||||||||   | ||| ||| || ||||||||||| | ||||||||||||||||||    
T  24094932 ttgaaaaagcattaagaacagacaagaactaatttaaattagacacaagaaaagaatactgaatgaagactttattaattgaatccaacaaataagaagg 24094833  T
Q  148 agttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggat 247  Q
      || ||||||||||| ||||| ||||||||||||||  |||   |||| ||||  ||||||||||||||| |||||||| ||||  | ||||||||||     
T  24094832 gattaatcttagaaccgtaatc-aagaggtttagttgctcatggaaacaaacatgataacaaaacaatagagaaacatactctagacaaaacaagaggag 24094734  T
Q  248 gatggagat 256  Q
    ||| |||||    
T  24094733 gatagagat 24094725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 23876657 - 23876520
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    |||||||||||||||||| | |||||||||||||||||   |||||||| || |||||||   |||||||||||||  |||   |||||||||| | |||    
T  23876657 aataaaaactttattaattgaatccaacaaataagaagtgattcatcttcgagccctaat---agaggtttagttgcgcatggaaacatacatcattaca 23876561  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagaggatga 249  Q
    |||||||||||||||||||| |||  |||||||||||||||    
T  23876560 aaacaatagaaaaacataccgtagatagaacaagaggatga 23876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 11438119 - 11437963
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| |||||| ||||||||||| | |||||||||||||||||| ||||||| |  |||| |||||||||| | ||||||| ||||   || |||||||     
T  11438119 aactgaataaatactttattaatagaatccaacaaataagaaggggttcatcgttaaacc-taatcaaagatgcttagttgcacatggaaatatacatca 11438021  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | |||| |||||| ||||||||||||||  ||||||||||| | ||||||||||||||    
T  11438020 ttacaagacaataaaaaaacataccctacagagaacaagagaaggatggagatcctct 11437963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 261
Target Start/End: Original strand, 27084973 - 27085121
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||| |  |||||||||||| || | ||||||| |  | |||||||||||||||||||||||  ||| |||||  ||||||| | ||||    
T  27084973 aaaaactttattaattgagtccaacaaataaaaaagggttcatcgtgaagccctaatcaaagaggtttagttgctcatgacaaccgacatcgttaaaaaa 27085072  T
Q  212 caatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||| ||||||||| | || |||||||||||||| ||||||||||||||    
T  27085073 caatataaaaacata-cttaatgagaacaagaggaggatggagatcctct 27085121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 11308225 - 11308348
Alignment:
Q  104 aactaaat-aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    |||||||| |||||||||||||||  ||||||||||||||||||| ||||||||| ||||| |  ||||| ||||||| |||  ||| |||||| |||||    
T  11308225 aactaaatgaaaaactttattaataatatccaacaaataagaaggggttcatcttggaacctttttcaaa-aggtttatttgctcatgacaacaaacatc 11308323  T
Q  203 gtaacaaaacaatagaaaaacatac 227  Q
     |||||||| |||||||||||||||    
T  11308324 ataacaaaataatagaaaaacatac 11308348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 28900727 - 28900853
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||  ||| ||||||||||||||| ||||||| | |||||  |||||| ||||||||||||  || | ||||| ||||| ||||||||    
T  28900727 aaaaactttattaataatattcaacaaataagaaggggttcatcgtggaaccg-aatcaa-gaggtttagttgctcagtgcaacagacatcataacaaaa 28900824  T
Q  212 caatagaaaaacataccctagtgagaaca 240  Q
    ||||||||||||||| ||||| |||||||    
T  28900825 caatagaaaaacatatcctagagagaaca 28900853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 28075204 - 28075053
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatca-aagaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||| | |||||| ||||||||||||||||||| | ||||||||||||  |||| |||||||  ||||  |||   | ||| | |||||    
T  28075204 aaaaactttattaattgaatccaataaataagaaggagttcatcgtggaaccctaatcatgagagatttagttccacatggcaagtgatatcattacaaa 28075105  T
Q  211 acaata-gaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||  |||||||||||||||| |||||||||||| ||| ||||||||||    
T  28075104 acaatataaaaaacataccctagtaagaacaagaggaggatagagatcctct 28075053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 257
Target Start/End: Complemental strand, 18771649 - 18771500
Alignment:
Q  108 aaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaac 207  Q
    |||||||| |||||||||  | ||||||||||||||||||  |||||| | ||| |||||||||||||| ||||||   |||  ||||  ||||| | ||    
T  18771649 aaataaaagctttattaaaagaatccaacaaataagaagggcttcatcgtggaatcctaatcaaagaggattagtttatcatggcaaccgacatcattac 18771550  T
Q  208 aaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    ||||||||||||||| |||| |||| |||||||| | || ||||||||||    
T  18771549 aaaacaatagaaaaagatactctagagagaacaaaatgaggatggagatc 18771500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 12774265 - 12774397
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||| |||| | ||| ||||||||| ||   ||||||||| ||||| | |||||||||||||||||| ||||  |||| | |||| | ||||||    
T  12774265 aaaaactttactaattgaatctaacaaataataaaaggttcatcttggaaccttgatcaaagaggtttagttgcacatggcaaccttcatcattacaaaa 12774364  T
Q  212 caatagaaaaacataccctagtgagaacaagag 244  Q
    |||||||||||||||  |||| |||||||||||    
T  12774365 caatagaaaaacataatctagagagaacaagag 12774397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 260
Target Start/End: Original strand, 13583011 - 13583162
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    |||||||||||| ||||  | |||||||| |||||||||  |||||  | |||||||||| |||||| |||||||   ||| |||||| ||||| | |||    
T  13583011 aataaaaactttgttaactgaatccaacatataagaagggtttcattgtggaaccctaatgaaagagatttagttactcatgacaacaaacatcattaca 13583110  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctc 260  Q
    ||||||| |||||||||||||||   |||| |||||| || |||||||||||    
T  13583111 aaacaatggaaaaacataccctacaaagaataagagggtggtggagatcctc 13583162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 252
Target Start/End: Original strand, 15213162 - 15213300
Alignment:
Q  113 aaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaac 212  Q
    |||| ||||||||| | |||||||| |||||||||  |||||||||||||| ||||| |||| |||||||||  |||   |||| ||||| ||||||||     
T  15213162 aaaattttattaattgaatccaacagataagaagggattcatcttagaaccataatc-aagatgtttagttgctcatggaaacaaacatcataacaaaat 15213260  T
Q  213 aatagaaaaacataccctagtgagaacaagaggatgatgg 252  Q
    ||| ||||||||||||||||  |||||| ||||| |||||    
T  15213261 aattgaaaaacataccctagaaagaacatgaggaggatgg 15213300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 16051739 - 16051850
Alignment:
Q  151 tcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag-aaaaacataccctagtgagaacaagaggatga 249  Q
    |||||||| ||||||||| ||||||||||||||  ||||  ||||| ||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||    
T  16051739 tcatcttaaaaccctaattaaagaggtttagtttcacatggcaacaaacatcataacaaaacaatagaaaaaacatatcctagagagaacaaaatgagga 16051838  T
Q  250 tggagatcctct 261  Q
    | ||||||||||    
T  16051839 tagagatcctct 16051850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 260
Target Start/End: Original strand, 24927258 - 24927405
Alignment:
Q  114 aaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaac 212  Q
    ||||||||||||| | |||||| |||||||||  ||||||||||||||||| |||| | ||||||| |||||  |||  |||    |||| | |||||||    
T  24927258 aaactttattaattgaatccaaaaaataagaataagttcatcttagaacccaaatcgagagaggttcagttgctcatagcaaatggcatcattacaaaac 24927357  T
Q  213 aatagaaaaacataccctagtgagaacaagaggatgatggagatcctc 260  Q
    |||||||||||||||||||  ||||||||| ||| |||| ||||||||    
T  24927358 aatagaaaaacataccctaaagagaacaaggggaggatgaagatcctc 24927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 28259944 - 28260076
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||| | ||| | |||||||||||  ||||||| |||||||||||||||  ||||||||| | || | |||||  ||||| | | ||||    
T  28259944 aaaaactttattaattgaatctatcaaataagaagaggttcatcctagaaccctaatcaa--aggtttagtggcacgtgacaactgacatcatcataaaa 28260041  T
Q  212 caatagaaaaacataccctagtgagaacaagagga 246  Q
     |||||||||||||||| ||| |||||||||||||    
T  28260042 taatagaaaaacataccatagagagaacaagagga 28260076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 260
Target Start/End: Original strand, 6887598 - 6887755
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| |||||| | ||||||||| | || ||||||||| ||||  | ||||| | |||||||||||||||||||||||||| ||||  ||||  |||||     
T  6887598 aactgaataaacaatttattaattgaattcaacaaatatgaagaggatcatcgtggaaccctaatcaaagaggtttagttgcacatggcaaccgacatca 6887697  T
Q  204 taacaaaacaata-gaaaaacataccctagtgagaacaagaggatgatggagatcctc 260  Q
    | ||||||||||| |||||||||||| |||  ||||||| | || |||| ||||||||    
T  6887698 ttacaaaacaataggaaaaacataccttagatagaacaatatgaggatgaagatcctc 6887755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 13305091 - 13304983
Alignment:
Q  132 ccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacccta 231  Q
    |||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||   ||  ||||  ||||| ||| ||||||||||||||| ||||||||    
T  13305091 ccaacaaataagaaggggttcatcgtagaaacctaatcaa-gaggtttagttgcttatggcaaccgacatcataagaaaacaatagaaaaatatacccta 13304993  T
Q  232 gtgagaacaa 241  Q
    | ||||||||    
T  13304992 gagagaacaa 13304983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 16051564 - 16051665
Alignment:
Q  46 tcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaag--aaatataactaaataaaaactttattaatggtatccaacaaataag 143  Q
    ||||||||||| | ||||||||||  |||||||||||||||| |||||||||  || ||||| |||||| ||||||||||||| | ||||||  ||||||    
T  16051564 tcaattgaaaaggtattaagcacatgcaagaacaaattaaataggacacaagcaaagtataattaaatagaaactttattaatcgaatccaaacaataag 16051663  T
Q  144 aa 145  Q
    ||    
T  16051664 aa 16051665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 22892658 - 22892774
Alignment:
Q  129 tatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaa--tagaaaaacata 226  Q
    |||||||||||   ||| ||||||||||| ||||||||||||| ||||||||||||  |||  ||||| |||||  ||||||| ||  ||||||||||||    
T  22892658 tatccaacaaaatggaaagagttcatcttggaaccctaatcaa-gaggtttagttgctcatggcaacagacatcagaacaaaaaaaaatagaaaaacata 22892756  T
Q  227 ccctagtgagaacaagag 244  Q
    |||||| |||||||||||    
T  22892757 ccctagagagaacaagag 22892774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 28290776 - 28290914
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    ||||||||| | |||||||||||||| ||| ||||||| || ||||||||| ||||  ||||||||| |||| ||||||| || |   ||||||||| ||    
T  28290776 tttattaattgaatccaacaaataagtagg-gttcatcgtataaccctaataaaag--gtttagttgcacatcacaacatgcaacaatacaaaacaaaag 28290872  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    |||| || ||||||| |||| ||| |||| ||||||||||||    
T  28290873 aaaaccacaccctagagagagcaataggaggatggagatcct 28290914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 5154479 - 5154338
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    ||||||||| | ||||||||||||| |||| ||||||| | ||||| |||||||| |||||||||||  ||| |||||  ||||| |  |||||||  ||    
T  5154479 tttattaattgaatccaacaaataataaggggttcatcgtggaaccttaatcaaataggtttagttgctcatgacaaccgacatcattgcaaaaca--ag 5154382  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||| ||||| ||| | |||||| || | ||||||||||||||    
T  5154381 aaaaatataccgtagagtgaacaaaagaaggatggagatcctct 5154338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 23951908 - 23951987
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaaga 98  Q
    |||||| |||||||  ||||||||||||| ||||||||| ||| ||| |||  |||| ||||||||||||||||||||||    
T  23951908 aattttcaagattaccgatacggattctcgattgaaaaaacatcaagaacatgcaagtacaaattaaattggacacaaga 23951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 29046699 - 29046824
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||||||||    ||||||||||||||||| ||||||| | |||||||||||||| || |||||||   |||  ||||| |||||     
T  29046699 aactgaatgaaaactttattaataaattccaacaaataagaaggggttcatcgtggaaccctaatcaaa-agatttagtttctcatggcaacaaacatca 29046797  T
Q  204 taacaaaacaatagaaaaacataccct 230  Q
    |||||||| ||||| |||| |||||||    
T  29046798 taacaaaataatagtaaaatataccct 29046824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 14184633 - 14184562
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagtt 183  Q
    ||||||||||||||| | |||||||||||||||||  | ||||  | |||| ||||||||||||||||||||    
T  14184633 aaaaactttattaattgaatccaacaaataagaagaggatcatagtggaactctaatcaaagaggtttagtt 14184562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 23893730 - 23893663
Alignment:
Q  192 caacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    ||||||||| | |||||||||||||||| ||| ||| |||| |||||||| |||| ||||||||||||    
T  23893730 caacatacaacataacaaaacaatagaataacctactctagagagaacaataggaggatggagatcct 23893663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 9e-48; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 42 - 260
Target Start/End: Original strand, 16621967 - 16622188
Alignment:
Q  42 attctcaattgaaaaagcattaagcacaaacaagaa--caaattaaattggacacaagaaata--taactaaataaaaactttattaatggtatccaaca 137  Q
    |||||||||||||||||||||||||||||| || ||  ||| ||||||  ||||||||||| |  ||||| |||| ||||||||||||||  ||||||||    
T  16621967 attctcaattgaaaaagcattaagcacaaaaaaaaaaacaatttaaatcagacacaagaaaaacataactgaatataaactttattaatgaaatccaaca 16622066  T
Q  138 aataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgaga 237  Q
    || ||||||| |||| |||| |||||||||| ||||||||||||||| |||| |||||||||  | ||||||||||||||||||||||||||||  ||||    
T  16622067 aacaagaagg-gttcttcttcgaaccctaattaaagaggtttagttgcacatgacaacatacgccataacaaaacaatagaaaaacataccctaaagaga 16622165  T
Q  238 acaagaggatgatggagatcctc 260  Q
    ||||||| | |||||||| ||||    
T  16622166 acaagagaaggatggagaccctc 16622188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 243
Target Start/End: Original strand, 18451539 - 18451766
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaat--ataactaaataaaa 115  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||| |||| ||||| |  |||   ||||||  || |||    
T  18451539 aattttcaagattattgatacgaattcttaattgaaaaagcattaagcacaagcaagaacttatttaaatcggacatagtaaaagcataactggattaaa 18451638  T
Q  116 actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaat 215  Q
    |||||||| |  | |||||||||||||||| | ||||||||||  |||||||| |||||||||||||||  ||| | |||| ||||   |||||||||||    
T  18451639 actttattgactgaatccaacaaataagaaagggttcatcttatcaccctaattaaagaggtttagttgctcatgaaaacagacataaaaacaaaacaat 18451738  T
Q  216 agaaaaacataccctagtgagaacaaga 243  Q
    ||||||||||| ||||| ||||||||||    
T  18451739 agaaaaacatatcctagagagaacaaga 18451766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 258
Target Start/End: Complemental strand, 20695333 - 20695196
Alignment:
Q  121 attaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaa 220  Q
    |||||||  |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||  || |||||||| | |||||||||||||||    
T  20695333 attaatgaaatccaacaaataagaaggggttcatcgtagaaccctaatcaaagagttttagttgcacatggcagcatacatcattacaaaacaatagaaa 20695234  T
Q  221 aacataccctagtgagaacaagaggatgatggagatcc 258  Q
    |||||||||||| ||||| |||| || |||| ||||||    
T  20695233 aacataccctagagagaaaaagaagaggatgaagatcc 20695196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 261
Target Start/End: Original strand, 17381328 - 17381555
Alignment:
Q  36 atacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaactttattaatggtatcc 133  Q
    ||||| |||||||||||||||| ||||||| |||  |||| |||||||||||  |||||||||||   |||  | ||| |||||||||||||| | ||||    
T  17381328 atacgaattctcaattgaaaaaacattaagaacatgcaagtacaaattaaatcagacacaagaaaagcatatttgaatgaaaactttattaattgaatcc 17381427  T
Q  134 aacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagt 233  Q
    ||||||||||||||  ||||||||  || |  ||| ||||||||||||||| | ||  ||||| ||||| | | ||||||||| ||| |||||||||||     
T  17381428 aacaaataagaagggattcatcttgaaaactaaattaaagaggtttagttgcatatggcaacaaacatcattataaaacaatataaatacataccctaga 17381527  T
Q  234 gagaacaagaggatgatggagatcctct 261  Q
    |||||||| |||| ||||||||||||||    
T  17381528 gagaacaaaaggaggatggagatcctct 17381555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 261
Target Start/End: Original strand, 19763285 - 19763442
Alignment:
Q  105 actaaataaaa-actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    ||||||||||| | ||||||||| | ||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||   |||| |||||     
T  19763285 actaaataaaataatttattaattgaatccaacaaataagaaggagttcatcaaggaaccctaattaaagaggtttagttgtacatgttaacaaacatca 19763384  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | | ||||  |||||||||| |||||| | ||||||||||||| |||| |||||||||    
T  19763385 ttataaaaatatagaaaaacttacccttgagagaacaagaggaggatgaagatcctct 19763442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 12265003 - 12265138
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaaca 208  Q
    |||| ||||||||||||  | |||||  ||||||||||| |||||||||| |||||||||||||||||||||||||  ||| |||| | ||||| | |||    
T  12265003 aatataaactttattaagagaatccattaaataagaaggggttcatcttataaccctaatcaaagaggtttagttgctcatgacaatacacatcattaca 12265102  T
Q  209 aaacaatagaaaaacataccctagtgagaacaagag 244  Q
    |||||||||||||| |||| |||| |||||||||||    
T  12265103 aaacaatagaaaaatatacactagagagaacaagag 12265138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 25593960 - 25594204
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaat--ataactaaataaaa 115  Q
    |||||||||||||| |||| | |||||||| |||||||||||||| | | | | ||| ||||||| ||||  |||||||||||   | || | ||| |||    
T  25593960 aatttttaagattactgatgcagattctcagttgaaaaagcattaggaaaagagaagtacaaatttaaatctgacacaagaaaatcacaaatgaatgaaa 25594059  T
Q  116 actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaat 215  Q
    |||||| |||    |||||| |||||| ||| ||||||||| | | ||||||||||||||||||||||   |||| ||||| ||||| ||||||||||||    
T  25594060 actttaataacataatccaataaataaaaagaagttcatct-atatccctaatcaaagaggtttagttactcattgcaacaaacatcataacaaaacaat 25594158  T
Q  216 agaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||| | ||| ||||||||||||| |||| ||| |||||    
T  25594159 agaaaaacatatcttagagagaacaagaggaggatgaagaccctct 25594204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 24842404 - 24842264
Alignment:
Q  104 aactaaat-aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    |||||||| |||||||||||||||  ||| || |||||||||||| ||||||||| ||||||||||| |||| ||||| |||| ||| |||||||| |||    
T  24842404 aactaaatgaaaaactttattaataatattcatcaaataagaaggggttcatcttggaaccctaatc-aagatgtttacttgttcatgacaacatatatc 24842306  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
     |||||||||||||||||| |||||  ||| |||||||||||    
T  24842305 ataacaaaacaatagaaaagcatactatagagagaacaagag 24842264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 17028960 - 17028848
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||   |||||||||| | ||||| ||||||||||| ||||||    
T  17028960 atccaacaaataagaagaggttcatcttagaaccctgatcaaagaggtttagttgcacatggtaacatacatcattacaaatcaatagaaaaatataccc 17028861  T
Q  230 tagtgagaacaag 242  Q
    ||  |||||||||    
T  17028860 taaagagaacaag 17028848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 24268810 - 24268672
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||||||| |||||||||||||  | |||||||||||||||||| |||||| || ||| ||||||||| ||||||||||||  |||  ||| |||||||     
T  24268810 aactaaatgaaaactttattaacagaatccaacaaataagaagg-gttcattttggaatcctaatcaa-gaggtttagttgctcatggcaatatacatca 24268713  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
    ||||||||||||| ||||||||||||||  |||||||||||    
T  24268712 taacaaaacaatataaaaacataccctaaagagaacaagag 24268672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 24345440 - 24345302
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||||||| |||||||||||||  | |||||||||||||||||| |||||| || ||| ||||||||| ||||||||||||  |||  ||| |||||||     
T  24345440 aactaaatgaaaactttattaacagaatccaacaaataagaagg-gttcattttggaatcctaatcaa-gaggtttagttgctcatggcaatatacatca 24345343  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
    ||||||||||||| ||||||||||||||  |||||||||||    
T  24345342 taacaaaacaatataaaaacataccctaaagagaacaagag 24345302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 18281605 - 18281762
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||||||||||| |||||||||| | |||||||||||||||||  |||| || | |||| ||||||||||||||||||||   |||  ||||  |||||     
T  18281605 aactaaataaaacctttattaatagaatccaacaaataagaagtggttcgtcgtggaacgctaatcaaagaggtttagttactcatggcaaccgacatca 18281704  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |  || || |||||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  18281705 ttgcataaaaatagaaaaatataccctagagagaacaagaggacgatggaggtcctct 18281762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 20084191 - 20084070
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||| |||||||| ||||   ||||  |||| | |||||| |||| ||||||||||||    
T  20084191 atccaacaaataagaaggggttcatcatggaaccctaatcaaagagatttagttgcacatggtaacaaccatcattacaaaataatataaaaacataccc 20084092  T
Q  230 tagtgagaacaagaggatgatg 251  Q
    ||| |||||||| |||||||||    
T  20084091 tagagagaacaacaggatgatg 20084070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 7742305 - 7742436
Alignment:
Q  129 tatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacc 228  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||| |||| |||||  ||||| | | |||||| |||||||| |||||    
T  7742305 tatccaacaaataagaagg-gttcatcttggaaccctaattaaagaagtttagttgcacatgacaacggacatcattagaaaacagtagaaaaatatacc 7742403  T
Q  229 ctagtgagaacaagaggatgatggagatcctct 261  Q
     | | || ||||||||||||||| |||||||||    
T  7742404 attgagaaaacaagaggatgatgaagatcctct 7742436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 25681347 - 25681186
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa--tataactaaataaaaa 116  Q
    ||||||||||||||  ||||| ||||||||||||||| | ||||||| ||| ||||| |||||| |||| | ||||||||||   ||||||  ||  |||    
T  25681347 aatttttaagattaccgatacagattctcaattgaaacaacattaagaacagacaagtacaaataaaatcgaacacaagaaaagcataactggatggaaa 25681248  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtt 178  Q
    |||||||||| | ||| ||||||| |||||  |||| | |||||||||||||||||||||||    
T  25681247 ctttattaattgaatcgaacaaatgagaagaggttcgtattagaaccctaatcaaagaggtt 25681186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 30791332 - 30791192
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| |||||||||||||||||| | |||||| ||||||||||| |||  || | ||||||| |||||||||||||||||| |||| ||| |||||  |     
T  30791332 aactgaataaaaactttattaattgaatccaaaaaataagaaggggtttctcgtggaaccctgatcaaagaggtttagttgcacatgacagcatac--ca 30791235  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    | ||||| ||||||| || ||| |||||| |||||||||||||    
T  30791234 ttacaaagcaatagacaagcatgccctagagagaacaagagga 30791192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 20715286 - 20715161
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    |||||||||  ||||||||||||||||| |||||||||||  |||||||||| ||||||||| ||||  ||  |||||| |||||  |||||||||||||    
T  20715286 tttattaataatatccaacaaataagaaagagttcatcttgaaaccctaatc-aagaggtttggttgctcaagacaacaaacatcaaaacaaaacaatag 20715188  T
Q  218 aaaaacataccctagtgagaacaagag 244  Q
    ||||||||| | ||  |||||||||||    
T  20715187 aaaaacatatcatatagagaacaagag 20715161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 260
Target Start/End: Complemental strand, 18178859 - 18178704
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||||||||||||||||||   |||| |||| |||| ||   |||||||| ||| |||||||||| | ||||||| ||||||  ||||  ||||      
T  18178859 aactgaataaaaactttattaatttaatcctacaagtaagcagagtttcatcttggaatcctaatcaaataagtttagtagtacatcgcaactgacatta 18178760  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctc 260  Q
    | ||||||||||| ||||| ||||||||| ||||||||||||| |||| ||||||||    
T  18178759 ttacaaaacaataaaaaaa-ataccctagagagaacaagaggaggatgaagatcctc 18178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 22930641 - 22930528
Alignment:
Q  149 gttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggat 247  Q
    ||||||| | ||||| ||||||| |||||||| |||| |||  | | |||||||| | ||||||||||||||||||||| ||||| || ||||| ||||     
T  22930641 gttcatcgtggaaccttaatcaagagaggttttgttgcacacgatagcatacatcattacaaaacaatagaaaaacataacctagagataacaaaaggag 22930542  T
Q  248 gatggagatcctct 261  Q
    ||||||||||||||    
T  22930541 gatggagatcctct 22930528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 25945924 - 25945816
Alignment:
Q  138 aataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgaga 237  Q
    |||||||||  ||||||||||||||| |||||||| ||| |||||||||||| | |||  ||||| | |||||| |||| ||||| ||||| ||   |||    
T  25945924 aataagaagaggttcatcttagaaccttaatcaaataggcttagttgtacatgataaccgacatcattacaaaataataaaaaaatataccttaaataga 25945825  T
Q  238 acaagagga 246  Q
    |||||||||    
T  25945824 acaagagga 25945816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 31340804 - 31340867
Alignment:
Q  163 cctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacata 226  Q
    |||||| ||| | ||||||||| |||| |||||||||||| | |||||||||||||||||||||    
T  31340804 cctaataaaaaaagtttagttgcacatgacaacatacatcattacaaaacaatagaaaaacata 31340867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 24131336 - 24131210
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    ||||||||| | ||||||||||||| |||  ||||||||| |||||| |||||| ||||||||||||  ||||   |||  ||||| | |||||| ||||    
T  24131336 tttattaattgaatccaacaaataataagaggttcatcttggaaccccaatcaagagaggtttagtttcacatggtaaccgacatcattacaaaataata 24131237  T
Q  217 gaaaaacataccctagtgagaacaaga 243  Q
     |||| |||| ||||| ||||||||||    
T  24131236 taaaagcatatcctagagagaacaaga 24131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 12339457 - 12339557
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    ||||| ||||||||||| ||||||| | ||||||||||| |||||| |||||||  |||  ||||| | ||| |||||||| ||||||||| ||| ||||    
T  12339457 tccaataaataagaaggggttcatcgtggaaccctaatc-aagaggattagttgctcatggcaacaaagatcataacaaaataatagaaaaccatgccct 12339555  T
Q  231 ag 232  Q
    ||    
T  12339556 ag 12339557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 26328387 - 26328467
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgt 185  Q
    |||| ||| ||||||||||| ||  ||||||||||||||||||| ||||||| |  |||| ||||| |||||||||||||||    
T  26328387 aactgaatgaaaactttatttataatatccaacaaataagaaggggttcatcatgaaaccttaatc-aagaggtttagttgt 26328467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 26329537 - 26329577
Alignment:
Q  192 caacatacatcgtaacaaaacaatagaaaaacataccctag 232  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  26329537 caacaaacatcataacaaaacaatagaaaaacataccctag 26329577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 15694651 - 15694722
Alignment:
Q  159 gaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    |||||||||||||||||||||| ||  ||||  ||||  ||||| | ||||||||||||||||| |||||||    
T  15694651 gaaccctaatcaaagaggtttaatttcacatggcaactgacatcattacaaaacaatagaaaaatataccct 15694722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 24517818 - 24517759
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacat 189  Q
    ||||||||||||||||   |||||||||| ||||||||| ||||||||||| ||| ||||    
T  24517818 atccaacaaataagaataggttcatcttaaaaccctaataaaagaggtttaattgcacat 24517759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 31267659 - 31267705
Alignment:
Q  137 aaataagaaggagttcatcttagaaccctaatcaaagaggtttagtt 183  Q
    ||||||||||| ||||||| | |||||||||||||||| ||||||||    
T  31267659 aaataagaaggggttcatcgtggaaccctaatcaaagatgtttagtt 31267705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 30072747 - 30072703
Alignment:
Q  193 aacatacatcgtaacaaaacaatagaaaaacataccctagtgaga 237  Q
    |||| ||||| ||||||||||||||||||| ||||||||| ||||    
T  30072747 aacaaacatcataacaaaacaatagaaaaatataccctagagaga 30072703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3400655 - 3400410
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    ||||||| ||||  ||| |||||| |||||||   ||| ||||||||||| |||||||| |||||||||  ||||||||||||| || ||  ||||||||    
T  3400655 tactaatatatacggatcaattttcaagattaccaatatggattctcaatcgaaaaagcgttaagcacatgcaagaacaaattagatcgggtacaagaaa 3400556  T
Q  101 tataa----ctaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaaca 196  Q
     | ||    | |||||||||||||| |||| | |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||  ||| |    
T  3400555 aaaaaaaaacaaaataaaaactttactaatcgaatccaagaaataagaaggggttcatcttagaaccttaatcaaagaggtttagttgcacatggcaata 3400456  T
Q  197 tacatcgtaacaaaacaatagaaaaacataccctagtgagaacaag 242  Q
     | ||| ||||||||||||| ||||||||||||||| || ||||||    
T  3400455 aaaatcataacaaaacaatataaaaacataccctagagaaaacaag 3400410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 20470082 - 20470307
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaag-aaatataactaaataaaaac 117  Q
    |||||| |||||||  |||||||||||||| ||||||||||||||||||||| ||||||| |||||||| | ||||||| ||| |||||| |||| ||||    
T  20470082 aattttcaagattaccgatacggattctcagttgaaaaagcattaagcacaagcaagaacgaattaaatcgaacacaagaaaacataacttaatataaac 20470181  T
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatac--atcgtaacaaaacaat 215  Q
     |||||| | | |||||| |||||| ||||  |  |||||| |||||||||||||| ||||||||||| |||  ||| ||||  ||| |||||||||||     
T  20470182 attattagttgaatccaagaaataaaaagggctatatcttaaaaccctaatcaaagtggtttagttgttcatggcaatatacatatcataacaaaacaaa 20470281  T
Q  216 agaaaaacataccctagtgagaacaa 241  Q
    |||||| |||||||||| ||||||||    
T  20470282 agaaaagcataccctagagagaacaa 20470307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 23126930 - 23126705
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaac-aaattaaattggacacaagaaa--tataactaaataaaa 115  Q
    |||||| |||||||  ||| |||||| |||||||||||||||||||| ||||||||| || || |||||||||||||||||||  ||||| | ||| |||    
T  23126930 aattttcaagattagcgatgcggattttcaattgaaaaagcattaagaacaaacaagtacgaatttaaattggacacaagaaaagtataaatgaatgaaa 23126831  T
Q  116 actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaat 215  Q
    |  ||| |||| | |||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||   |||  ||| | ||||| ||||||||||||    
T  23126830 atgttactaattgaatccaaaaaataagaaggggttcatcttag-accctaatcaaagaggcttagttactcatggcaataaacatcataacaaaacaat 23126732  T
Q  216 agaaaaacataccctagtgagaacaag 242  Q
    ||||||||| ||||||| |||| ||||    
T  23126731 agaaaaacaaaccctagagagagcaag 23126705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 5312171 - 5312325
Alignment:
Q  104 aactaaat-aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatc 202  Q
    |||||||| ||||| ||||| ||| | |||||||||||||||| | ||||||| ||||| |||||||||||||||||||||| |||| |||||  |||||    
T  5312171 aactaaatgaaaaaatttatcaattgaatccaacaaataagaatgggttcatcgtagaatcctaatcaaagaggtttagttgcacatgacaaccgacatc 5312270  T
Q  203 gtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
     | |||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  5312271 attacaaaacaattgaaaaacataccctagagagaacaagaggaggatggagatc 5312325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 42 - 253
Target Start/End: Original strand, 21545187 - 21545398
Alignment:
Q  42 attctcaattgaaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaat-ataactaaataaaaactttattaatggtatccaacaaa 139  Q
    ||||| |||||||||| |||||||| ||||||||||| | || ||||  |||||||||||  | || | ||  ||||||||||||||   ||||||||||    
T  21545187 attcttaattgaaaaatcattaagcgcaaacaagaactattttaaatcagacacaagaaaacacaattgaaagaaaactttattaattaaatccaacaaa 21545286  T
Q  140 taagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaac 239  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||| ||||   ||||  |||| ||||||||||||| ||||||||||||||| ||||||    
T  21545287 taagaaggggttcatcttagaagcctaatcaaagaggtttacttgcacat--gaacaatcatcataacaaaacaatataaaaacataccctagagagaac 21545384  T
Q  240 aagaggatgatgga 253  Q
    |||||||| |||||    
T  21545385 aagaggataatgga 21545398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 20017789 - 20017547
Alignment:
Q  19 aatttttaagattattgatacggat-tctcaattgaaaaagcattaagcacaaacaagaacaaatt-aaattggacacaagaaata--taactaaataaa 114  Q
    ||||||||||||||| | ||||||  ||||| |||||||||||||||  ||| |||||||| |||| ||||||||||||||||| |  ||||| ||| ||    
T  20017789 aatttttaagattat-gttacggagatctcatttgaaaaagcattaaaaacagacaagaactaatttaaattggacacaagaaaaacataactgaatgaa 20017691  T
Q  115 aactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaa 214  Q
    |||||||| ||| | ||||||| |||||||| | ||||||||||||||||||||| || |||||||||||  |||   ||||  || | |||||||||||    
T  20017690 aactttatcaattgaatccaaccaataagaaagggttcatcttagaaccctaatc-aataggtttagttgctcatggtaacaaccaacataacaaaacaa 20017592  T
Q  215 tagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    |||||||||||| || || ||||||||||||| |||| |||||||    
T  20017591 tagaaaaacatagccaagagagaacaagaggaagatgaagatcct 20017547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 23073145 - 23072921
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    ||||||||||| |  || |||||| |||||||  |||| ||||||||||||||||||||||||||||||  ||||| | |||||||| ||||||||||||    
T  23073145 tactaatctattagtatcaattttcaagattaccgataaggattctcaattgaaaaagcattaagcacatgcaagagcgaattaaatcggacacaagaaa 23073046  T
Q  101 ta--taactaaataaaaac-tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacat 197  Q
     |  ||| |  |||||||  ||||||||||| ||||||||||||||||   |||||| ||||||||||||||||||||||| ||||  ||||  |||||     
T  23073045 aacataattggataaaaaaatttattaatggaatccaacaaataagaaatggttcattttagaaccctaatcaaagaggttaagtttcacatgccaacaa 23072946  T
Q  198 acatcgtaacaaaacaatagaaaaa 222  Q
    ||||| | | |||||||||||||||    
T  23072945 acatcattataaaacaatagaaaaa 23072921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 24596389 - 24596542
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    ||||||||||||||||||||||| | || ||||||||||||| | ||||||| | |||| ||||| |||||||||| ||||  ||| |||||  |||||     
T  24596389 aactaaataaaaactttattaatagaattcaacaaataagaatgggttcatcgtggaactctaattaaagaggtttggttgctcataacaaccgacatca 24596488  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    | | ||||||||| |||||||||| |||| ||||||||||||||||| ||||||    
T  24596489 ttataaaacaatataaaaacatacactagagagaacaagaggatgatagagatc 24596542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 4091926 - 4092037
Alignment:
Q  149 gttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatg 248  Q
    |||||| |||||||||||||||||||||||||||||   ||  ||||||||||  ||||||||||||||||||||||| ||||| ||||||||||||| |    
T  4091926 gttcatgttagaaccctaatcaaagaggtttagttgctaatggcaacatacattataacaaaacaatagaaaaacata-cctagagagaacaagaggaag 4092024  T
Q  249 atggagatcctct 261  Q
    |||||||||||||    
T  4092025 atggagatcctct 4092037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 232
Target Start/End: Original strand, 20040161 - 20040345
Alignment:
Q  46 tcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaatataactaaataaaaactttattaatggtatccaacaaataagaa 145  Q
    ||||||||||||  |||| | ||| || || ||||||||||| |||||| |||| ||||||| ||| |||||||||||| | | ||| ||||||||||||    
T  20040161 tcaattgaaaaataattacgaacagactagtacaaattaaatcggacaccagaa-tataactgaatgaaaactttattagttgaatctaacaaataagaa 20040259  T
Q  146 ggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctag 232  Q
    || ||||||  | ||||||||||| |||||||||| |||  |||   |||||||||| ||||||||||| | |||||||||||||||    
T  20040260 ggggttcatagttgaaccctaatc-aagaggtttatttgctcatggaaacatacatcataacaaaacaaaataaaaacataccctag 20040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 20050287 - 20050498
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaatataactaaataaaaact 118  Q
    |||||| |||||||   |||| |||| ||||||||||||  |||| | ||| ||||| ||||||||||| |||||| |||| ||||||| ||| ||||||    
T  20050287 aattttcaagattacctatacagattttcaattgaaaaataattacgaacagacaagtacaaattaaatcggacaccagaa-tataactgaatgaaaact 20050385  T
Q  119 ttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaataga 218  Q
    |||||| | | ||| |||||||||||||| ||||||  | ||||||||||| |||||||||| |||  |||   |||||||||| |||||| | || | |    
T  20050386 ttattagttgaatctaacaaataagaaggggttcatagtggaaccctaatc-aagaggtttatttgctcatggaaacatacatcataacaacataaaata 20050484  T
Q  219 aaaacataccctag 232  Q
    ||||||||||||||    
T  20050485 aaaacataccctag 20050498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 9405254 - 9405376
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||| ||||  ||||||||||||||||||| ||||||| | ||||||||||  ||||||||||||||  |||  |||||||||||     
T  9405254 aactgaatgaaaactttaataataatatccaacaaataagaaggggttcatcatggaaccctaat-taagaggtttagttgctcatggcaacatacatca 9405352  T
Q  204 taacaaaacaatagaaaaacatac 227  Q
    |||||||||||||||||| |||||    
T  9405353 taacaaaacaatagaaaatcatac 9405376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 21544290 - 21544366
Alignment:
Q  108 aaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||| | |||||||||||||||| |||||||||    
T  21544290 aaataaaaactttagtaatggaatccaacaaataagaaggggttcatcatggaaccctaatcaaagaagtttagttg 21544366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 22334704 - 22334835
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata-gaaaaacatacc 228  Q
    |||||||||| ||||||| ||||||| | ||||| ||||||||||||||| ||||||||| |||||||||||| | |||||| |||| |||||||||| |    
T  22334704 atccaacaaagaagaaggggttcatcgtggaaccataatcaaagaggttttgttgtacatgacaacatacatctttacaaaa-aataggaaaaacatatc 22334802  T
Q  229 ctagtgagaacaagaggatgatggagatcctct 261  Q
     |||  ||| ||||||||  |||||||||||||    
T  22334803 ttagaaagaccaagaggagaatggagatcctct 22334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 257
Target Start/End: Complemental strand, 5636920 - 5636773
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||| |||   ||||||||||||| || | ||||||| |  ||||||||| || ||||||| ||||| |||| |||||||||||| | |||||    
T  5636920 aaaaactttatcaatcaaatccaacaaataataaagggttcatcctgaaaccctaataaagagaggttgagttgcacatgacaacatacatcattacaaa 5636821  T
Q  211 acaata-gaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    |||||| |||||| ||||||||| ||||||||||||| | ||||||||    
T  5636820 acaataagaaaaaaataccctagagagaacaagaggaggttggagatc 5636773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 26839604 - 26839717
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||   |||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||  |||  ||||| | ||| ||||||||    
T  26839604 aaaaactttattaataaaatccaacaaataagaaggggttcatcttggaaccttaatc-aagaggtttagttgctcatggcaacaaatatcataacaaaa 26839702  T
Q  212 caatagaaaaacata 226  Q
    ||||| |||||||||    
T  26839703 caatataaaaacata 26839717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 2629947 - 2630047
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    ||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||  |||  ||||| ||||| ||||||||||| | |||||||||||||    
T  2629947 tccaacaaataagaaggggttcatcatggaaccctaatcaa-gaggtttagttgctcatggcaacaaacatcataacaaaacaaaataaaaacataccct 2630045  T
Q  231 ag 232  Q
    ||    
T  2630046 ag 2630047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 249
Target Start/End: Original strand, 7777524 - 7777631
Alignment:
Q  141 aagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaaca 240  Q
    ||||||| ||||||||| |||| |||||||| || |||||||||  |||  ||||| ||||| ||| ||||||||||||||||||||||||| |||||||    
T  7777524 aagaaggggttcatcttggaactctaatcaa-gaagtttagttgctcatggcaacaaacatcataataaaacaatagaaaaacataccctagagagaaca 7777622  T
Q  241 agaggatga 249  Q
    |||| ||||    
T  7777623 agagaatga 7777631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 7815997 - 7815891
Alignment:
Q  134 aacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagt 233  Q
    |||||||||||||| ||| ||||| |||| |||||||| ||||||||||||  |||  |||||||||||  || |||||||||||||||||||||||||     
T  7815997 aacaaataagaaggggtttatcttggaacgctaatcaa-gaggtttagttgctcatggcaacatacatcacaagaaaacaatagaaaaacataccctaga 7815899  T
Q  234 gagaacaa 241  Q
    | ||||||    
T  7815898 gtgaacaa 7815891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 9760815 - 9760664
Alignment:
Q  110 ataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaa 209  Q
    ||||||||||||||||  | |||||||||||||||||| ||||||| |  | ||||| ||||||||||||||| |  | |   | |  ||||| | ||||    
T  9760815 ataaaaactttattaaaagaatccaacaaataagaaggggttcatcgtgaagccctactcaaagaggtttagtcgctcctggaatctgacatcattacaa 9760716  T
Q  210 aacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    || |||||||||||||||| ||| |||||||| |||| ||||||||||||||    
T  9760715 aataatagaaaaacataccttagagagaacaataggaggatggagatcctct 9760664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 30406288 - 30406213
Alignment:
Q  109 aataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    |||||||||||||||||| | ||||||||||| |||||| ||||||| | ||||| ||||||||||||||||||||    
T  30406288 aataaaaactttattaattgaatccaacaaatgagaaggggttcatcgtggaaccataatcaaagaggtttagttg 30406213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 21472500 - 21472364
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||| ||||||||||||||    ||||||||||||||||| ||||||| | ||||| || |||| ||||||||| ||  |||  |||||||||||     
T  21472500 aactgaatgaaaactttattaataaattccaacaaataagaaggtgttcatcgtggaaccatattcaa-gaggtttagctgctcatggcaacatacatca 21472402  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
    ||  ||||||||||||||||||| ||||| ||||||||    
T  21472401 tatgaaaacaatagaaaaacatatcctagagagaacaa 21472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 18467216 - 18467072
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    ||||||||| | ||||||| |||||||||| ||| ||| | ||||| ||||||| ||||||||| |||  |||   |||||||||| | |||||||||||    
T  18467216 tttattaattgaatccaactaataagaaggggtttatcgttgaaccataatcaagagaggtttaattgcgcatggtaacatacatcattacaaaacaata 18467117  T
Q  217 gaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||| |||||| ||||| | |||||||| || ||| |||||||    
T  18467116 gaaaaatataccccagtgaaagcaagaggaggagggaaatcctct 18467072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 244
Target Start/End: Complemental strand, 7142773 - 7142630
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaagga----gttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatac 199  Q
    |||| ||| ||||||||||||||  ||||||||||||||||| ||    ||||||||| ||||||| ||||| ||||||||||||  |||  ||||||||    
T  7142773 aactgaatgaaaactttattaataatatccaacaaataagaatgaatgggttcatcttggaacccttatcaa-gaggtttagttgctcatggcaacatac 7142675  T
Q  200 atcgtaacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
    ||  ||| |||| | || ||||| ||||||||| |||||||||||    
T  7142674 attataataaaatattacaaaaatataccctagagagaacaagag 7142630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 9552765 - 9552710
Alignment:
Q  206 acaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  9552765 acaaaataatagaaaaatataccctagagagaacaagaggatgatggagatcctct 9552710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 221
Target Start/End: Original strand, 21536942 - 21537059
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||||| ||||||| |||||| ||||| |||||||||||||||||||  | |||||||||||||| | |||||||||  |||  ||||  | |||     
T  21536942 aactgaataagaactttagtaatggaatccatcaaataagaaggagttcataatggaaccctaatcaaataagtttagttgctcatggcaactgatatca 21537041  T
Q  204 taacaaaacaatagaaaa 221  Q
    | ||||||||||||||||    
T  21537042 ttacaaaacaatagaaaa 21537059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 315837 - 315722
Alignment:
Q  113 aaaactttattaatggtatccaacaaataagaaggag-ttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||||||||    ||||| |||||| |||| | |||||| | ||||||||||||| ||||||||||||  |||  ||||||||||| |||||||     
T  315837 aaaactttattaataaattccaataaataaaaagggggttcatcgtggaaccctaatcaa-gaggtttagttgctcatggcaacatacatcataacaaag 315739  T
Q  212 caatagaaaaacatacc 228  Q
    |||||||||||||||||    
T  315738 caatagaaaaacatacc 315722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 7493969 - 7493862
Alignment:
Q  133 caacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctag 232  Q
    ||||||||||||||| |||| || |  |  ||||||||| ||||||||||||  |||  ||||||||||| ||| | |||||||||||||||||||||||    
T  7493969 caacaaataagaaggggttcgtcgtgtattcctaatcaa-gaggtttagttggtcatggcaacatacatcataaaataacaatagaaaaacataccctag 7493871  T
Q  233 tgagaacaa 241  Q
     ||||||||    
T  7493870 agagaacaa 7493862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 11082244 - 11082122
Alignment:
Q  119 ttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaataga 218  Q
    |||||||| | ||||||||||||||   | ||||||| | ||||||||||||||||||||||| |  |||| |||||| ||||| | | |||||||||||    
T  11082244 ttattaatagaatccaacaaataag---gggttcatcgtggaaccctaatcaaagaggtttagctacacatgacaacacacatcatgaaaaaacaataga 11082148  T
Q  219 -aaaacataccctagtgagaacaaga 243  Q
     |||||||||  ||| ||||||||||    
T  11082147 aaaaacatactatagggagaacaaga 11082122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 20446905 - 20446807
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    ||||||||||||||||  | ||||  |  |||||||||||| || |||||||||  |||  ||||||||||| |||||||||||||||||||||||||||    
T  20446905 tccaacaaataagaagcggctcattgtgaaaccctaatcaa-gaagtttagttgctcatggcaacatacatcataacaaaacaatagaaaaacataccct 20446807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 11467482 - 11467602
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    |||||||| |||||| | |||||||||||||||||  || |||  | ||||| ||||||| |||| |||||||| |||| |||| ||||||| | |||||    
T  11467482 aaaaacttgattaattgaatccaacaaataagaagaggtccattgtggaaccttaatcaagagagatttagttgcacataacaaaatacatcattacaaa 11467581  T
Q  211 acaatagaaaaacataccctag 232  Q
    ||||||  ||||||||||||||    
T  11467582 acaata-taaaacataccctag 11467602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 15758144 - 15757988
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||||||||||||||||||   ||| || ||||||||||| ||||||    ||||| |||||||||| | ||| |||| |||   |||  |||||     
T  15758144 aactgaataaaaactttattaatcaaatctaaaaaataagaagg-gttcatgaaggaaccttaatcaaagaagattatttgttcatggaaaccgacatca 15758046  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | |||||| |||||||||| ||| ||||| || ||||||||||||||| |||||||||    
T  15758045 ttacaaaataatagaaaaatatatcctagagataacaagaggatgatgaagatcctct 15757988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 9071135 - 9071004
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||   || ||||||| ||||||  ||||||||| ||||| |||| ||| | |||||||||  | |  ||||||  ||| ||||||||    
T  9071135 aaaaactttattaataagattcaacaaacaagaagaggttcatcttggaaccataat-aaataagtttagttgctcgtagcaacatcaatcataacaaaa 9071037  T
Q  212 caatagaaaaacataccctagtgagaacaagag 244  Q
    ||||||||||||||||| ||| ||||| |||||    
T  9071036 caatagaaaaacataccttagagagaagaagag 9071004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 9801161 - 9801106
Alignment:
Q  206 acaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||| ||| |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  9801161 acaaaataattgaaaaacacaccctagagagaacaagaggaggatggagatcctct 9801106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 7151580 - 7151467
Alignment:
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    |||||||||  ||||||  ||||||||| |  |||||| | ||||||||||||| ||||||||||||  |||  |||||| |||| |||||| | ||||     
T  7151580 tttattaataatatccattaaataagaatggtttcatcatggaaccctaatcaa-gaggtttagttgctcatggcaacatgcatcataacaatataatat 7151482  T
Q  218 aaaaacataccctag 232  Q
    |||||||||||||||    
T  7151481 aaaaacataccctag 7151467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 3094093 - 3094034
Alignment:
Q  113 aaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaa 172  Q
    |||||||||||||| | |||||||| |||||||||  |||| |||||||| |||||||||    
T  3094093 aaaactttattaattgaatccaacacataagaagggattcaacttagaactctaatcaaa 3094034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 221
Target Start/End: Original strand, 7326379 - 7326497
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatc 202  Q
    ||||||||| |||||||||||||   |||||||||||||| |   ||||||| | |||||||||| || ||||||||||||  ||||  ||||| |||||    
T  7326379 aactaaatagaaactttattaattaaatccaacaaataagtacatgttcatcgtggaaccctaataaagagaggtttagttacacatggcaacaaacatc 7326478  T
Q  203 gtaacaaaacaatagaaaa 221  Q
     | |||||| || ||||||    
T  7326479 attacaaaataagagaaaa 7326497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 17880424 - 17880493
Alignment:
Q  192 caacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||| ||||| | |||||| ||||  |||||||||| ||| |||||||| |||| ||||||||||||||    
T  17880424 caacaaacatcattacaaaataataataaaacataccatagagagaacaataggaggatggagatcctct 17880493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 17859787 - 17859998
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaa 116  Q
    |||||| |||||||  ||| | ||||||||||||||||| |||| |  ||||||||| ||||||||||| ||||||||||||   | |||  ||| ||||    
T  17859787 aattttcaagattaccgatgcagattctcaattgaaaaatcattcaaaacaaacaagtacaaattaaatcggacacaagaaaagcaaaacataattaaaa 17859886  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    |||||||||| | |||||||||||||||||| ||||||||| |||| |||||||||||| |||||||| ||||  ||||| | ||  | |||||||||||    
T  17859887 ctttattaattgaatccaacaaataagaaggtgttcatcttggaactctaatcaaagagttttagttgcacatggcaacaaatatgattacaaaacaata 17859986  T
Q  217 gaaaaacatacc 228  Q
    ||||||||||||    
T  17859987 gaaaaacatacc 17859998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 19669921 - 19670157
Alignment:
Q  19 aatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaa 116  Q
    |||||| ||||||| ||||  |||||||| |||||||||||||||||   | ||||| || |||||||| | ||| ||||||   |||| | ||| ||||    
T  19669921 aattttcaagattactgatgtggattctctattgaaaaagcattaagattagacaagtacgaattaaatcgaacataagaaaatcataattgaatgaaaa 19670020  T
Q  117 ctttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaata 216  Q
    |||||||||| | |||||||||| || |||| ||||||||||||| ||||| ||||||||||||||||  ||| |||||| | ||| |||||||| ||||    
T  19670021 ctttattaatcgaatccaacaaaaaataagg-gttcatcttagaatcctaaacaaagaggtttagttgctcatgacaacaaaaatcataacaaaataata 19670119  T
Q  217 gaaaaacataccctagtgagaacaagaggatgatggag 254  Q
     ||||||||||||||| ||||||| | ||| |||||||    
T  19670120 taaaaacataccctagagagaacagggggaggatggag 19670157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 246
Target Start/End: Original strand, 30235763 - 30235904
Alignment:
Q  102 ataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacat 201  Q
    |||||| |||| ||||||||||||| | || ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||  ||  |||||||||||    
T  30235763 ataacttaatataaactttattaatagaattcaacaaataagaatgagttcatcttagaaccctgatcaaagtggtttagttgctcaagacaacatacat 30235862  T
Q  202 cgtaacaaaacaatagaaaaacataccctagtgagaacaagagga 246  Q
    |   | ||||||||||||||||||||||||| |||||||||||||    
T  30235863 c---ataaaacaatagaaaaacataccctagagagaacaagagga 30235904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 47 - 261
Target Start/End: Complemental strand, 16528416 - 16528215
Alignment:
Q  47 caattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaata--taactaaataaaaactttattaatggtatccaacaaataaga 144  Q
    ||||||||||| |||||||||||  ||||||||||||||||  ||||||||||| |  ||| | |||| ||||||||||||||  |||||||||||||||    
T  16528416 caattgaaaaaccattaagcacaggcaagaacaaattaaatcagacacaagaaaaacataattgaatagaaactttattaatgaaatccaacaaataaga 16528317  T
Q  145 aggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaagag 244  Q
    ||| ||||||||||||||||               ||||| |||| |||| | ||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  16528316 aggggttcatcttagaaccc---------------agttgcacatgacaatagacatcataacaaaacaatacaaaaacataccctagagagaacaagag 16528232  T
Q  245 gatgatggagatcctct 261  Q
    || |||| |||||||||    
T  16528231 gaggatgaagatcctct 16528215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 13723175 - 13723415
Alignment:
Q  20 atttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaac 117  Q
    ||||| ||||||| || ||| |||| ||||||||||  | |||||| | || ||||||| |||||| |  |||||||||||   |||||| |||||||||    
T  13723175 attttcaagattactgttactgattttcaattgaaagcgtattaagaaaaagcaagaacgaattaa-tcagacacaagaaaatgataacttaataaaaac 13723273  T
Q  118 tttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatag 217  Q
    || |||||| | |||||| ||||||||  |  |||||| |||||||| |||||||  | |||||||| |||| |||||| ||||| ||||||||||||||    
T  13723274 ttcattaatagaatccaaaaaataagattggattcatcgtagaacccaaatcaaattgatttagttgcacatgacaacaaacatcataacaaaacaatag 13723373  T
Q  218 aaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||| ||||||||   |||||| | ||| ||||||||||||||    
T  13723374 aaaaatatacccta--cagaacagggggaggatggagatcctct 13723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 32929889 - 32930006
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaa-gaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatacc 228  Q
    |||||| |||||||||| |||||||||| ||||| |||| ||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||  |||    
T  32929889 atccaagaaataagaagaagttcatctttgaaccttaattaaaagaggtttagttgtacatgacaacaaacatcgttacaaaacaatagaaaaaccaacc 32929988  T
Q  229 ctagtgagaacaagagga 246  Q
     ||| ||||| |||||||    
T  32929989 ttagagagaataagagga 32930006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 9725606 - 9725703
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    ||||||||||||||||| ||||||| | ||||||||||||| |||||||| |||  ||| |||||| ||||| ||||||||||||||||||||||||||    
T  9725606 tccaacaaataagaaggggttcatcgtggaaccctaatcaa-gaggtttaattgctcatgacaacagacatcataacaaaacaatagaaaaacataccc 9725703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 26499254 - 26499401
Alignment:
Q  110 ataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaa 209  Q
    |||||||||||||||||   ||||  ||||||||||||  |||| | |  |||| ||||||||||| |||||||| |||| |||||| ||||  | ||||    
T  26499254 ataaaaactttattaattcaatcccgcaaataagaagggtttcaccgtgaaaccttaatcaaagagatttagttgcacatgacaacaaacataattacaa 26499353  T
Q  210 aacaatagaaaaacataccctagtgagaacaagaggatgatggagatc 257  Q
    | ||||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  26499354 agcaatataaaaacataccttagagagaacaagaggaggatggagatc 26499401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 30756353 - 30756219
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||| | || |||||||||| ||   ||| ||||| ||||||||||||| | ||||||||||| |||| |||||||||||| | |||||    
T  30756353 aaaaactttattaattgaatacaacaaataaaaataggtttatcttggaaccctaatcaagaaaggtttagttgcacatgacaacatacatcattacaaa 30756254  T
Q  211 acaat---agaaaaacataccctagtgagaacaag 242  Q
    |||||   |||||||||||| |||| |||||||||    
T  30756253 acaatacaagaaaaacatacactagagagaacaag 30756219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 9395996 - 9396131
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||| | ||||||||| |||||||  ||||||||| ||||| ||||||| ||||||||||||  ||||  ||||  ||||| | | |||    
T  9395996 aaaaactttattaatcgaatccaacaattaagaagatgttcatcttggaaccataatcaagagaggtttagtttcacatggcaaccgacatcattataaa 9396095  T
Q  211 acaatagaaaaacataccctagtgagaacaagagga 246  Q
    ||||| |||||||||| |||   |||||||||||||    
T  9396096 acaattgaaaaacatatcctgaagagaacaagagga 9396131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 15575663 - 15575529
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||||||||||||||||||||||    |||||  | |||||||| ||||||| | ||||||||||||| |||| |||||||  |||  ||||| |||||     
T  15575663 aactaaataaaaactttattaataaattccaa--attaagaaggggttcatcgtggaaccctaatcaa-gaggcttagttgctcatggcaacaaacatca 15575567  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
    ||| |||||||||||| ||||||||| || ||||||||    
T  15575566 taagaaaacaatagaataacatacccaagagagaacaa 15575529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 16174753 - 16174885
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaa-agaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||| | |||||| ||||||||| | | |||| || ||| ||||||||| |||| |||||||| ||||   |||||||||| | | |||    
T  16174753 aaaaactttattaattgaatccaagaaataagaaaggggtcatattggaatcctaatcaagagagatttagttgcacatggtaacatacatcattataaa 16174852  T
Q  211 acaatagaaaaacataccctagtgagaacaaga 243  Q
    | |||||||||| ||||| ||| ||||||||||    
T  16174853 ataatagaaaaatataccgtagagagaacaaga 16174885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 1558231 - 1558387
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcg 203  Q
    |||| ||||||||||||||||||   ||| || ||||||||||| ||||||    ||||| |||||||||| | ||| |||| |||   |||  |||||     
T  1558231 aactgaataaaaactttattaatcaaatctaaaaaataagaagg-gttcatgaaggaaccttaatcaaagaagattatttgttcatggaaaccgacatca 1558329  T
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    | |||||| |||||||||| ||| ||||| || ||||||||||||||| |||||||||    
T  1558330 ttacaaaataatagaaaaatatatcctagagataacaagaggatgatgaagatcctct 1558387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 261
Target Start/End: Complemental strand, 22263089 - 22262943
Alignment:
Q  114 aaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaaca 213  Q
    |||||||||| || | || ||||||||||||| | |||||| || |||||||||||||||| | ||| ||  ||||   ||| |||||| | ||||||||    
T  22263089 aaactttattcattgaattcaacaaataagaaagggttcatattggaaccctaatcaaagacg-ttatttacacatggtaacgtacatcattacaaaaca 22262991  T
Q  214 atagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||||||  ||| || || |||| || ||||| ||||||||    
T  22262990 atagaaaaacatacattagagaaaataagaagaggatggcgatcctct 22262943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 257
Target Start/End: Original strand, 12971754 - 12971903
Alignment:
Q  105 actaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgt 204  Q
    ||||||||| ||||||||| || | ||||||||||||||||||  || ||| | |||||| ||||||     |||||||| ||||   ||||| |||| |    
T  12971754 actaaataagaactttattcattgaatccaacaaataagaagggatttatcatggaacccgaatcaa-----tttagttgcacatgggaacatgcatcat 12971848  T
Q  205 aacaaaacaataga--aaaacataccctagtgagaacaagaggatgatggagatc 257  Q
     |||| ||||||||  | |||||||| ||| ||||||||||||| |||| |||||    
T  12971849 tacaatacaatagaatataacataccatagagagaacaagaggaggatgaagatc 12971903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 15319540 - 15319421
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||   ||||||||| |||||||| ||| ||| | |||||||||||||| | ||||| ||| ||||   |||  ||||| | ||||||    
T  15319540 aaaaactttattaattaaatccaacaagtaagaaggggttaatcatggaaccctaatcaaacaagtttaattggacatggaaaccgacatcattacaaaa 15319441  T
Q  212 caatagaaaaacatacccta 231  Q
    |||| |||||  ||||||||    
T  15319440 caattgaaaagtatacccta 15319421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 13830386 - 13830454
Alignment:
Q  193 aacatacatcgtaacaaaacaatagaaaaa---cataccctagtgagaacaagaggatgatggagatcc 258  Q
    |||||||||| | |||||| |||| |||||   |||||||||| ||||||||||||| |||||||||||    
T  13830386 aacatacatcattacaaaataataaaaaaaaatcataccctagagagaacaagaggaggatggagatcc 13830454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 16440061 - 16439923
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatc-aaagaggtttagttgtacattacaacatacatcgtaacaaa 210  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||  || |||| || | ||||||||| ||  ||||  ||||| ||||  | |||||    
T  16440061 aaaaactttattaattgaatccaacaaataagaagaggttcatcttgaaatcctattcgatagaggtttaatttcacatggcaacaaacattattacaaa 16439962  T
Q  211 acaatagaaaaacataccctagtgagaacaagaggatga 249  Q
    | |||| ||||||||| ||| | ||||||| ||| ||||    
T  16439961 ataatataaaaacatatcctggagagaacatgagaatga 16439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 15370189 - 15370120
Alignment:
Q  104 aactaaat-aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaa 172  Q
    |||||||| |||||||||||||||   |||||||||||||||||| ||| ||| | ||||| ||||||||    
T  15370189 aactaaatgaaaaactttattaattaaatccaacaaataagaaggggttaatcatggaaccataatcaaa 15370120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 28178710 - 28178629
Alignment:
Q  104 aactaaataaaaactttattaa-tggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttg 184  Q
    |||| ||||||||||||||||| ||  ||||||||||||||||||  |||||| | ||| |||||| ||| | |||||||||    
T  28178710 aactgaataaaaactttattaaatgaaatccaacaaataagaagggtttcatcgtggaaacctaataaaaaaagtttagttg 28178629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 11180 - 11311
Alignment:
Q  130 atccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccc 229  Q
    |||||| |||||||||   |||| |||||||||||||||||||||||||||| || ||||   |||||||||||| |||||||||||||||||||||| |    
T  11180 atccaaaaaataagaataggttcttcttagaaccctaatcaaagaggtttaggtgcacatggaaacatacatcgttacaaaacaatagaaaaacatacac 11279  T
Q  230 tagtgagaacaagaggatgatggagatcctct 261  Q
    ||| ||||||||||||| |||||| |||||||    
T  11280 tagagagaacaagaggaggatggatatcctct 11311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 8148 - 8281
Alignment:
Q  128 gtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacatac 227  Q
    |||||||| ||||||||||  |||| |||| |||||||||||||| ||||||||||| ||||   ||||||||| || ||||||||||||||||||||||    
T  8148 gtatccaaaaaataagaagaggttcttcttcgaaccctaatcaaataggtttagttgcacatggaaacatacattgttacaaaacaatagaaaaacatac 8247  T
Q  228 cctagtgagaacaagaggatgatggagatcctct 261  Q
     |||| ||||||||||||| |||||| |||||||    
T  8248 actagagagaacaagaggaggatggatatcctct 8281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 6934 - 6793
Alignment:
Q  41 gattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--ataactaaataaaaactttattaatggtatccaacaa 138  Q
    |||| ||||||||||||||||||||| ||  ||||||| |||||||||||||| ||||||   |||| | ||| |||  ||||||||| | |||||||||    
T  6934 gattttcaattgaaaaagcattaagcgcaggcaagaacgaattaaattggacataagaaaagcataattgaatgaaatatttattaattgaatccaacaa 6835  T
Q  139 ataagaaggagttcatcttagaaccctaatcaaagaggttta 180  Q
    ||||||||| |||||||||||| |||||||||||||| ||||    
T  6834 ataagaaggggttcatcttagagccctaatcaaagagtttta 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 22144 - 21972
Alignment:
Q  5 aatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaat--a 102  Q
    ||||||||  ||| |||||| |||||||| |||||  ||||||||||| ||||| ||||| |||   |||| || |||||| | | ||||||||||   |    
T  22144 aatctatacggatcaattttaaagattatcgatacaaattctcaattggaaaagtattaatcacgggcaaggacgaattaactcgaacacaagaaaagca 22045  T
Q  103 taactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagag 175  Q
    ||| | |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||  |||||||||||    
T  22044 taattgaataaaaactttattaatggaatccaacaaattagaaggggttcatcttagaactataatcaaagag 21972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 5140 - 5274
Alignment:
Q  114 aaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaaca 213  Q
    |||||||||| ||  |||||||||||| |||||  ||||||| |  ||| |||||||| || |||||||||  ||| |||||||||||| ||||||||||    
T  5140 aaactttatttataatatccaacaaatcagaagtggttcatcatgaaactctaatcaa-gaagtttagttgctcatgacaacatacatcataacaaaaca 5238  T
Q  214 atagaaaaacataccctagtgagaacaagaggatga 249  Q
    ||||||||||||| ||||| ||||||||||| ||||    
T  5239 atagaaaaacatatcctagagagaacaagagaatga 5274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 33144 - 33295
Alignment:
Q  110 ataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaa 209  Q
    ||||||||||||||||  | ||||||||||||||||||  |||||| | |||||||||||||||||| ||||||   |||  ||||  ||||| | ||||    
T  33144 ataaaaactttattaaaagaatccaacaaataagaagggcttcatcatggaaccctaatcaaagaggattagtttatcatggcaaccgacatcattacaa 33243  T
Q  210 aacaatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    ||||||||||||| |||| |||| |||||||| | || || |||||||||||    
T  33244 aacaatagaaaaagatactctagagagaacaaaatgaggacggagatcctct 33295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 68825 - 68988
Alignment:
Q  1 tactaatctataaagataaatttttaagattattgatacggattctcaattgaaaaagcattaagcacaaacaagaacaaattaaattggacacaagaaa 100  Q
    |||||| ||||| |||| |||||| | ||| |  ||||| |||||||||||||||| |||||||||| | |||||||| |||||||| ||||||||||||    
T  68825 tactaacctatacagatcaattttcacgatcaccgatacagattctcaattgaaaaggcattaagcatagacaagaacgaattaaatcggacacaagaaa 68924  T
Q  101 --tataactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaac 162  Q
       |||| | |||||||| |||||||| |  ||  |||||||||||||  ||||||||||||||    
T  68925 atcataatttaataaaaagtttattaacgaaatttaacaaataagaagtggttcatcttagaac 68988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 8348 - 8238
Alignment:
Q  133 caacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctag 232  Q
    ||||||||||||||| ||||||||| |||||||||| || ||||||||||||  |||  ||||| ||||| |||  |||||||||||||| |||||||||    
T  8348 caacaaataagaaggggttcatcttggaaccctaattaa-gaggtttagttgctcatagcaacaaacatcataatgaaacaatagaaaaaaataccctag 8250  T
Q  233 tgagaacaagag 244  Q
     |||||||||||    
T  8249 agagaacaagag 8238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 261
Target Start/End: Complemental strand, 3855 - 3710
Alignment:
Q  116 actttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaat 215  Q
    ||||| ||||||| |||||||||||||||||  ||||||||| ||||| ||| |||||| |||| ||||  |||   |||  ||||| | |||||| |||    
T  3855 actttgttaatggaatccaacaaataagaagaggttcatcttggaaccataaacaaagaagtttggttgctcatggtaaccgacatcattacaaaataat 3756  T
Q  216 agaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
    |||||| ||| | |||| ||||||||||||| ||||||||||||||    
T  3755 agaaaatcattctctagagagaacaagaggaggatggagatcctct 3710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 22021 - 22152
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    |||||||||||||||  |||||||||||||||| || ||||||| | ||||| | ||||| ||||||||||||| |||  ||||||| ||| ||||||||    
T  22021 aaaaactttattaataatatccaacaaataagatggggttcatcatggaaccatgatcaa-gaggtttagttgttcatggcaacataaatcataacaaaa 22119  T
Q  212 caatagaaaaacataccctagtgagaacaagag 244  Q
    ||||| ||| | ||||||| | ||||| |||||    
T  22120 caataaaaatatataccctggagagaataagag 22152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 2443 - 2552
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    ||||||||||||||||| ||||||  | ||||||||||||| ||||||||||||  |||  ||||||| ||| ||| |||| ||||||||| ||||||||    
T  2443 tccaacaaataagaaggggttcattgtggaaccctaatcaa-gaggtttagttgctcatggcaacatatatcataagaaaataatagaaaatcataccct 2541  T
Q  231 agtgagaacaa 241  Q
    || || |||||    
T  2542 agagataacaa 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 2608 - 2717
Alignment:
Q  131 tccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccct 230  Q
    ||||||||||||||||| ||||||  | ||||||||||||| ||||||||||||  |||  ||||||| ||| ||| |||| ||||||||| ||||||||    
T  2608 tccaacaaataagaaggggttcattgtggaaccctaatcaa-gaggtttagttgctcatggcaacatatatcataagaaaataatagaaaatcataccct 2706  T
Q  231 agtgagaacaa 241  Q
    || || |||||    
T  2707 agagataacaa 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 4607 - 4717
Alignment:
Q  114 aaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaaca 213  Q
    |||||||||||||   || |||||||||||||   ||||||||||||| |||||||||| |||||||||||| | |   |||| ||||| | ||||||||    
T  4607 aaactttattaataaaattcaacaaataagaaatggttcatcttagaa-cctaatcaaaaaggtttagttgttcgtggtaacaaacatcattacaaaaca 4705  T
Q  214 atagaaaaacat 225  Q
    ||||||||||||    
T  4706 atagaaaaacat 4717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 227692 - 227747
Alignment:
Q  204 taacaaaacaatagaaaaacataccctagtgagaacaagaggatgatggagatcct 259  Q
    |||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||    
T  227692 taacaaaacaattgaaaaacatactctagagagaacaagaggaggatggagatcct 227747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 11059 - 11207
Alignment:
Q  104 aactaaataaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaaga--ggtttagttgtacattacaacatacat 201  Q
    |||| ||||||||||| ||||||   ||| ||||||| |||||| ||||||| | |||||||||| ||| |  |||||||||| ||||  ||||||| ||    
T  11059 aactgaataaaaacttgattaattaaatctaacaaatgagaagg-gttcatcgtggaaccctaataaaaaaaaggtttagttgcacatggcaacataaat 11157  T
Q  202 cgtaacaaaacaatagaaaaacataccctagtgagaacaagaggatgatg 251  Q
      | ||||||||||||||||| ||||| ||| ||||||| ||||| ||||    
T  11158 tatcacaaaacaatagaaaaatataccttagagagaacatgaggaggatg 11207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 12992 - 12843
Alignment:
Q  112 aaaaactttattaatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaa 211  Q
    ||||||||| ||||||| |||||||||||||||||  | ||||  | ||||| ||| |||| | |||| ||||  |||   |||  ||||| | ||||||    
T  12992 aaaaactttgttaatggaatccaacaaataagaagtggctcattgtggaaccataaacaaacaagtttggttgctcatggaaaccgacatcattacaaaa 12893  T
Q  212 caatagaaaaacataccctagtgagaacaagaggatgatggagatcctct 261  Q
     ||||||||| ||| | |||| ||||||||||||| ||||||||||||||    
T  12892 taatagaaaatcattctctagagagaacaagaggaggatggagatcctct 12843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 242
Target Start/End: Complemental strand, 37702 - 37568
Alignment:
Q  109 aataaaaactttatt-aatggtatccaacaaataagaaggagttcatcttagaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaac 207  Q
    ||||||||| ||||| ||||  |||| ||| ||||||||| ||||||| | |||||||||| | |||  ||||||||  |||  ||||  || || | ||    
T  37702 aataaaaacattatttaatgaaatcctacacataagaaggggttcatcatggaaccctaataagagaattttagttgcccatggcaaccgacgtcattac 37603  T
Q  208 aaaacaatagaaaaacataccctagtgagaacaag 242  Q
    |||||||| |||||||||||||||| |||||||||    
T  37602 aaaacaattgaaaaacataccctagagagaacaag 37568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 37026 - 37107
Alignment:
Q  159 gaaccctaatcaaagaggtttagttgtacattacaacatacatcgtaacaaaacaatagaaaaacataccctagtgagaacaa 241  Q
    |||||||||||||| || ||||||||  |||  |||||  |||||||| |||||||||||| |||||||||||  ||||||||    
T  37026 gaaccctaatcaaaaag-tttagttgctcatgccaacaagcatcgtaagaaaacaatagaagaacataccctatagagaacaa 37107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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