View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7117_high_23 (Length: 251)
Name: NF7117_high_23
Description: NF7117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7117_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 47453713 - 47453475
Alignment:
| Q |
2 |
atttgatagttggaatacttgtttttcaatatcaatggtatgcaagccttttgctaatcattttcaaatgattccattacttctacccattagtattaac |
101 |
Q |
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| T |
47453713 |
atttgatagttggaatacttgtttttcaatatcaatggtatgcaagccttttgctaatcattttcaaatgattccattacttctacccattagtattaac |
47453614 |
T |
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| Q |
102 |
catcatagttaattctacctattagttctaattataattaatattatcatggaggtttcttgagcatcattgggtctcaaaagttttagttttcaccaca |
201 |
Q |
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| T |
47453613 |
catcatagttaattctacctattagttctaattataattaatattatcatggaggtttcttgagcatcattgggtctcaaaagttttagttttcaccaca |
47453514 |
T |
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| Q |
202 |
tttgtttcatctccttataaggagttaaactagattctt |
240 |
Q |
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| T |
47453513 |
tttgtttcatctccttataaggagttaaactagattctt |
47453475 |
T |
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