View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7117_high_28 (Length: 247)
Name: NF7117_high_28
Description: NF7117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7117_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 1114612 - 1114384
Alignment:
| Q |
1 |
cttgaattgagtttgagtaccatctagaaatctagaatgtataagtggtacatgaagtaagtttatgtaaatgtgcttaaatttagtttacattaacatg |
100 |
Q |
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| T |
1114612 |
cttgaattgagtttgagtaccatctagaaatctagaatgtataagtggtacatgaagtaagtttatgtaaatgtgtttaaacttagtctacaggaacatg |
1114513 |
T |
|
| Q |
101 |
tttaaatgtagttgtatttgagtttattaggttatatgttgattatgtcatgcttggttgaaacgataaagtgtttaaatgatttcatttctagattgtc |
200 |
Q |
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| T |
1114512 |
tttaaatgtagttgtatttgagtttattaggttatatgttgattaggtcatgtttggttgaaacgataaagtgtttaaatgattacatttctagattgtc |
1114413 |
T |
|
| Q |
201 |
agttcatccaaattattgcatgtcaaatt |
229 |
Q |
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|||| |||||||||||||||||||||||| |
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| T |
1114412 |
agtttatccaaattattgcatgtcaaatt |
1114384 |
T |
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