View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7118_high_26 (Length: 240)
Name: NF7118_high_26
Description: NF7118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7118_high_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 27730507 - 27730284
Alignment:
| Q |
17 |
attgtaaaagttcatttggtcaaacagatttcacattcacaagttcaattacctctactccttctaggtttgcagatgtagcatatcctaattgattgag |
116 |
Q |
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| T |
27730507 |
attgtaaaagttcatttggtcaaacagatttcacattcacaagttcaattacctctactccttctaggtttgtagatgtagcatatcctaattgattgag |
27730408 |
T |
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| Q |
117 |
aggaaatgaaattcactatgttattcatcatgttttcaatcatattaggaaaaattatgatgctgaatgtgtaacatgggggacacaaattaaaaaattc |
216 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||| |
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| T |
27730407 |
aggaaatgaaattcaatatgttattcatcatgttttcaatcatactaagaaaaattctgatgctgaatgtgtaacatgggggagacaaattaaaaaattc |
27730308 |
T |
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| Q |
217 |
ctatcttcattattctgtctctat |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
27730307 |
ctatcttcattattctgtctctat |
27730284 |
T |
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