View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7118_low_12 (Length: 380)

Name: NF7118_low_12
Description: NF7118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7118_low_12
NF7118_low_12
[»] chr8 (1 HSPs)
chr8 (1-294)||(1116334-1116631)


Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 1116334 - 1116631
Alignment:
Q  1 aatctcaattcagtaagtttggggaagttaaataagttgctaagggtattttgggaaatatatttaaagattttgagtttgaggttgtacctaggaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1116334 aatctcaattcagtaagtttggggaagttaaataagttgctaagggtattttgggaaatatatttaaagattttgagtttgaggttgtacctaggaaaca 1116433  T
Q  101 caaacatg----agtgtgtgttttttgacgtgcaaaaaggttaaaaaagcattacaaaatcctgttcctatctctgttgtggattgaggaaggatgatgg 196  Q
    |||||||     ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1116434 caaacatacataagtgtttgttttttgacgtggaaaaaggttaaaaaagcattacaaaatcctgttcctatctctgttgtggattgaggaaggatgatgg 1116533  T
Q  197 gtgctatcagtatcatggctttaccactcgtcatctccgttttcaaacctctctcaaccaccacccccctccactctacacttctacgccgccgctgt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1116534 gtgctatcagtatcatggctttaccactcgtcatctccgttttcaaacctctctcaaccaccacccccctccactctacacttctacgccgccgctgt 1116631  T

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