View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7118_low_21 (Length: 250)
Name: NF7118_low_21
Description: NF7118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7118_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 47453713 - 47453470
Alignment:
| Q |
1 |
atttgatagttggaatacttgtttttcaatatcaatggtatgcaagccttttgctaatcattttcaaatgattccattacttctacccattagtattaac |
100 |
Q |
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| T |
47453713 |
atttgatagttggaatacttgtttttcaatatcaatggtatgcaagccttttgctaatcattttcaaatgattccattacttctacccattagtattaac |
47453614 |
T |
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| Q |
101 |
catcatagttaattctacctattagttctaattataattaatattatcatggaggtttcttgagcatcattgggtctcaaaagttttagttttcaccaca |
200 |
Q |
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| T |
47453613 |
catcatagttaattctacctattagttctaattataattaatattatcatggaggtttcttgagcatcattgggtctcaaaagttttagttttcaccaca |
47453514 |
T |
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| Q |
201 |
tttgtttcatctccttataaggagttaaactagattcttctcac |
244 |
Q |
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| T |
47453513 |
tttgtttcatctccttataaggagttaaactagattcttatcac |
47453470 |
T |
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