View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7118_low_8 (Length: 408)
Name: NF7118_low_8
Description: NF7118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7118_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 13 - 381
Target Start/End: Complemental strand, 30397801 - 30397433
Alignment:
| Q |
13 |
aatattttgcgccctgaacctttccaacaaagcaaagcagaaaatatttgttaaatttgcacatgcttctaaatcctagtagggtagtacatttgctgga |
112 |
Q |
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| T |
30397801 |
aatattttgcgccctgaacctttccaacaaagcaaagcagaaaatatttgttaaatttgcacatgcttctaaatcctagtagggtagtacatttgctgga |
30397702 |
T |
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| Q |
113 |
tggtttggatgatctctcttctatgtgagtgttaatggtgagaataatttatgcaaagaccttggtaataaccaattatcaatcatcattggtaataaaa |
212 |
Q |
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| T |
30397701 |
tggtttggatgatctctcttctatgtgagtgttaatggtgagaataatttatgcaaagaccttggtaataaccaattatcaatcatcattggtaataaaa |
30397602 |
T |
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| Q |
213 |
gttaccacgaatcgtagataatgaattcatagtattcttaccatcataaactaactgaatcccagttaatagttatttgatttcaggaattttttatgac |
312 |
Q |
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| T |
30397601 |
gttaccacgaatcgtagataatgaattcataggattcttaccatcatcaactaactgaatcccagttaatagttatttgatttcaggaattttttatgcc |
30397502 |
T |
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| Q |
313 |
ggataatgtttgtaatttgtaggcaatagttgttttctaataagcatacgcctatggctacgcgtttac |
381 |
Q |
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| T |
30397501 |
ggataatgtttgtaatttgtaggcaatagttgttttctaataagcatacgcctatggctacgcgtttac |
30397433 |
T |
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