View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7119_high_3 (Length: 287)

Name: NF7119_high_3
Description: NF7119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7119_high_3
NF7119_high_3
[»] chr5 (22 HSPs)
chr5 (141-287)||(24323938-24324084)
chr5 (141-287)||(24360562-24360708)
chr5 (9-86)||(24323749-24323826)
chr5 (9-86)||(24360373-24360450)
chr5 (1-86)||(43574620-43574705)
chr5 (1-86)||(24448904-24448989)
chr5 (7-86)||(19142985-19143063)
chr5 (7-86)||(22600468-22600547)
chr5 (1-86)||(8170020-8170103)
chr5 (1-86)||(32703438-32703521)
chr5 (8-86)||(27328766-27328846)
chr5 (10-86)||(41014333-41014408)
chr5 (1-85)||(7368413-7368495)
chr5 (9-86)||(41425962-41426039)
chr5 (1-86)||(38879595-38879682)
chr5 (7-86)||(4619146-4619227)
chr5 (8-66)||(7097803-7097860)
chr5 (7-86)||(13801809-13801890)
chr5 (1-54)||(34154850-34154903)
chr5 (2-86)||(39301137-39301222)
chr5 (10-86)||(1405201-1405277)
chr5 (7-86)||(35710327-35710404)
[»] chr7 (29 HSPs)
chr7 (1-86)||(27629648-27629733)
chr7 (1-86)||(7879652-7879737)
chr7 (1-86)||(11617624-11617709)
chr7 (1-86)||(2541055-2541140)
chr7 (1-86)||(10693109-10693192)
chr7 (1-86)||(21172045-21172128)
chr7 (7-86)||(46354208-46354289)
chr7 (9-86)||(33871954-33872030)
chr7 (10-86)||(23419719-23419795)
chr7 (1-86)||(32758275-32758358)
chr7 (1-86)||(42391136-42391219)
chr7 (7-86)||(47716473-47716554)
chr7 (10-86)||(7644970-7645047)
chr7 (8-85)||(14099049-14099126)
chr7 (8-85)||(14409066-14409143)
chr7 (1-86)||(18512489-18512573)
chr7 (1-86)||(40463891-40463975)
chr7 (15-86)||(19426939-19427010)
chr7 (1-79)||(48735158-48735234)
chr7 (9-86)||(8148989-8149067)
chr7 (1-86)||(35334852-35334935)
chr7 (8-86)||(38262239-38262317)
chr7 (7-86)||(42805538-42805619)
chr7 (1-86)||(1408471-1408556)
chr7 (10-86)||(18747500-18747577)
chr7 (9-86)||(32233179-32233255)
chr7 (10-86)||(42476887-42476961)
chr7 (26-86)||(22699031-22699091)
chr7 (7-86)||(31591151-31591228)
[»] chr3 (32 HSPs)
chr3 (1-86)||(40272848-40272933)
chr3 (1-86)||(22122953-22123036)
chr3 (1-86)||(8247723-8247810)
chr3 (1-86)||(10795459-10795546)
chr3 (7-86)||(39203552-39203629)
chr3 (1-86)||(46421071-46421158)
chr3 (7-86)||(22609802-22609880)
chr3 (1-86)||(1217126-1217209)
chr3 (1-86)||(31592885-31592968)
chr3 (9-86)||(12914079-12914156)
chr3 (1-86)||(26573163-26573248)
chr3 (1-86)||(30928183-30928268)
chr3 (1-66)||(47624098-47624162)
chr3 (1-86)||(13628826-13628913)
chr3 (1-86)||(29366756-29366843)
chr3 (7-86)||(34420685-34420765)
chr3 (15-86)||(4495714-4495785)
chr3 (7-86)||(26869743-26869821)
chr3 (15-86)||(54032609-54032680)
chr3 (7-86)||(13730644-13730725)
chr3 (7-86)||(14986993-14987074)
chr3 (1-55)||(15797287-15797341)
chr3 (1-55)||(34771400-34771454)
chr3 (9-86)||(53996609-53996687)
chr3 (1-86)||(54374381-54374467)
chr3 (1-82)||(54484730-54484812)
chr3 (14-83)||(31904906-31904975)
chr3 (1-82)||(45948874-45948955)
chr3 (7-55)||(16735507-16735555)
chr3 (1-66)||(45786250-45786317)
chr3 (14-66)||(52428526-52428578)
chr3 (11-86)||(55401212-55401288)
[»] scaffold0057 (2 HSPs)
scaffold0057 (1-86)||(46845-46930)
scaffold0057 (8-66)||(24815-24873)
[»] chr8 (24 HSPs)
chr8 (1-86)||(35261693-35261778)
chr8 (1-86)||(36720810-36720895)
chr8 (1-83)||(29877111-29877193)
chr8 (1-86)||(28817662-28817747)
chr8 (1-86)||(44530163-44530248)
chr8 (1-86)||(12670286-12670369)
chr8 (1-86)||(5135325-5135410)
chr8 (1-86)||(13160716-13160800)
chr8 (1-85)||(8897800-8897884)
chr8 (7-86)||(45071279-45071357)
chr8 (7-86)||(7136569-7136650)
chr8 (1-86)||(12625903-12625989)
chr8 (9-86)||(8483982-8484059)
chr8 (11-86)||(44742564-44742640)
chr8 (46-86)||(44781587-44781627)
chr8 (10-82)||(20869941-20870015)
chr8 (8-86)||(17823590-17823668)
chr8 (7-85)||(23000261-23000338)
chr8 (1-86)||(30454133-30454216)
chr8 (8-86)||(25250536-25250616)
chr8 (9-86)||(29521729-29521806)
chr8 (10-86)||(35105937-35106014)
chr8 (26-86)||(18164821-18164880)
chr8 (1-86)||(39461030-39461117)
[»] chr2 (17 HSPs)
chr2 (1-86)||(8455352-8455437)
chr2 (1-86)||(21779297-21779380)
chr2 (1-86)||(12023955-12024039)
chr2 (9-78)||(32781332-32781401)
chr2 (1-82)||(9671199-9671278)
chr2 (1-86)||(10546176-10546262)
chr2 (8-86)||(17623578-17623656)
chr2 (1-86)||(14444743-14444827)
chr2 (7-84)||(36871509-36871585)
chr2 (1-86)||(10543712-10543799)
chr2 (1-86)||(24200659-24200746)
chr2 (11-86)||(17668016-17668091)
chr2 (1-64)||(22371091-22371153)
chr2 (8-86)||(25641516-25641593)
chr2 (9-79)||(44521417-44521487)
chr2 (1-86)||(14530332-14530419)
chr2 (46-86)||(29419970-29420010)
[»] chr4 (27 HSPs)
chr4 (8-82)||(7909324-7909397)
chr4 (1-86)||(20224998-20225081)
chr4 (1-86)||(5306700-5306784)
chr4 (1-86)||(5648273-5648357)
chr4 (9-86)||(17043438-17043515)
chr4 (1-86)||(25463136-25463221)
chr4 (1-86)||(47443971-47444056)
chr4 (12-86)||(37494865-37494939)
chr4 (1-86)||(47528566-47528649)
chr4 (1-86)||(30639394-30639478)
chr4 (7-86)||(48598867-48598944)
chr4 (1-83)||(20639694-20639777)
chr4 (1-86)||(9832349-9832432)
chr4 (12-86)||(19027862-19027936)
chr4 (2-80)||(25629069-25629147)
chr4 (1-86)||(40915843-40915927)
chr4 (9-86)||(41018838-41018914)
chr4 (10-86)||(9987879-9987955)
chr4 (1-66)||(23501821-23501888)
chr4 (1-86)||(11054184-11054267)
chr4 (7-86)||(16408643-16408724)
chr4 (1-55)||(29207934-29207988)
chr4 (8-86)||(54967035-54967112)
chr4 (8-66)||(13256442-13256502)
chr4 (1-66)||(14983868-14983933)
chr4 (1-66)||(51865074-51865139)
chr4 (7-74)||(35894503-35894571)
[»] chr1 (27 HSPs)
chr1 (1-86)||(11596550-11596634)
chr1 (8-85)||(41319849-41319926)
chr1 (1-86)||(46247989-46248074)
chr1 (1-86)||(46991841-46991926)
chr1 (1-86)||(20036257-20036343)
chr1 (9-86)||(47214548-47214623)
chr1 (1-86)||(14617075-14617160)
chr1 (9-86)||(25468307-25468384)
chr1 (9-86)||(32632601-32632677)
chr1 (7-84)||(44485151-44485228)
chr1 (1-86)||(10668262-10668349)
chr1 (2-86)||(18724582-18724666)
chr1 (7-86)||(30395768-30395849)
chr1 (1-86)||(34725134-34725217)
chr1 (1-86)||(35253223-35253306)
chr1 (1-62)||(4349699-4349760)
chr1 (1-86)||(18944680-18944767)
chr1 (1-55)||(12126873-12126927)
chr1 (9-86)||(45812581-45812656)
chr1 (1-86)||(6925137-6925222)
chr1 (8-53)||(21910692-21910737)
chr1 (1-86)||(22930105-22930188)
chr1 (1-82)||(31382250-31382330)
chr1 (1-61)||(6983847-6983907)
chr1 (8-56)||(15505631-15505679)
chr1 (1-66)||(19932789-19932856)
chr1 (46-86)||(22327136-22327176)
[»] chr6 (10 HSPs)
chr6 (2-86)||(2166447-2166533)
chr6 (2-86)||(2178080-2178166)
chr6 (1-86)||(1354793-1354876)
chr6 (1-86)||(1346978-1347061)
chr6 (1-86)||(12221951-12222038)
chr6 (1-86)||(29355891-29355978)
chr6 (8-86)||(3815120-3815198)
chr6 (1-86)||(33138847-33138932)
chr6 (15-79)||(20400688-20400752)
chr6 (11-86)||(23240870-23240943)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-86)||(10086-10169)
scaffold0187 (1-86)||(20414-20497)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-86)||(30593-30676)
[»] scaffold0254 (1 HSPs)
scaffold0254 (2-86)||(4171-4258)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-76)||(10834-10909)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-79)||(48670-48746)
[»] scaffold0049 (1 HSPs)
scaffold0049 (9-86)||(58991-59070)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 24323938 - 24324084
Alignment:
Q  141 ttaatttctatccaatacgagtgaaaaggtaatcagaggagaggaaaccttcaatgtgagagaagtccaagaatgatcagtggcactgagcgcggagtta 240  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24323938 ttaatttctatccaatacgagtgaaaaagtaatcagaggaaaggaaaccttcaatgtgagagaagtccaagaatgatcagtggcattgagcgcggagtta 24324037  T
Q  241 aggtgatcgtagttttcctgtaacaagatttaacgcaaagttagaga 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24324038 aggtgatcgtagttttcctgtaacaagatttaacgcaaagttagaga 24324084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 24360562 - 24360708
Alignment:
Q  141 ttaatttctatccaatacgagtgaaaaggtaatcagaggagaggaaaccttcaatgtgagagaagtccaagaatgatcagtggcactgagcgcggagtta 240  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24360562 ttaatttctatccaatacgagtgaaaaagtaatcagaggaaaggaaaccttcaatgtgagagaagtccaagaatgatcagtggcattgagcgcggagtta 24360661  T
Q  241 aggtgatcgtagttttcctgtaacaagatttaacgcaaagttagaga 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24360662 aggtgatcgtagttttcctgtaacaagatttaacgcaaagttagaga 24360708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 24323749 - 24323826
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  24323749 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttg 24323826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 24360373 - 24360450
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  24360373 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttg 24360450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43574705 - 43574620
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||||||  |||| ||||||  |||||||||| || ||||||| |||||||||||||||||||    
T  43574705 cagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttg 43574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24448989 - 24448904
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||| | |||||||||| ||  |||||||||||||||    
T  24448989 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttg 24448904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 19142985 - 19143063
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||||| ||| | ||||||  |||||||||| |||||||||| || ||||||||||||||||    
T  19142985 ccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgt-ttttacacaagaggttgtttccaggacttg 19143063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 22600547 - 22600468
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||| |||||| |||||| ||||| ||| ||  |||||||||| |||||||||| | |||||||||||||||||    
T  22600547 ccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttg 22600468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8170020 - 8170103
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  8170020 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaaaggctgtttccaggacttg 8170103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32703521 - 32703438
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  32703521 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 32703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 27328846 - 27328766
Alignment:
Q  8 cgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||| |||||||||||||||    
T  27328846 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttg 27328766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 41014408 - 41014333
Alignment:
Q  10 ggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  41014408 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttg 41014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7368495 - 7368413
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggactt 85  Q
    ||||| ||||||||||||||||| | |||| ||||| ||||||  |||||||||  |||||||||| ||  ||||||||||||||    
T  7368495 cagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 41426039 - 41425962
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| | |||| ||||| || |||  |||||||||| ||||||||||||  |||||||||| |||||    
T  41426039 gggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttg 41425962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38879682 - 38879595
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| ||||| |||| ||  |||||||||||||||    
T  38879682 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttg 38879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 4619146 - 4619227
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  | |||||||||||||    
T  4619146 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttg 4619227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7097803 - 7097860
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    |||||||||||| ||| |||||| ||||| ||||||| |||||||||| ||||||||||    
T  7097803 cgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgt-ttttacacaa 7097860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 13801809 - 13801890
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  || ||||||||||||    
T  13801809 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttg 13801890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34154850 - 34154903
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctg 54  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||    
T  34154850 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 39301222 - 39301137
Alignment:
Q  2 agggcccgggaaggggtccca-ctatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| |||||||||||||||| || ||||| | ||||||||||  |||||||||| || ||||||| || ||||| ||| ||||||    
T  39301222 agggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttg 39301137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 1405277 - 1405201
Alignment:
Q  10 ggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| ||||||||| |||||| ||||| ||||||| ||||| || | ||||| | || || ||||||||||||||||    
T  1405277 ggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttg 1405201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 35710404 - 35710327
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||||| |||||  |||||  |||||||  | |||||||||| ||  |||||||||||||||    
T  35710404 ccgggaaggggtcccaccatttggtgtattgaacgcagccttaccc--tattttacacaagaggctgtttccaggacttg 35710327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27629733 - 27629648
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||||||||| ||  |||||||||||||||    
T  27629733 cagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttg 27629648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7879737 - 7879652
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||| ||| |||||||||| |||||||||||||||||||    
T  7879737 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttg 7879652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11617624 - 11617709
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| || |||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| || ||||||||||||||||    
T  11617624 cagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttg 11617709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2541055 - 2541140
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||  ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  2541055 cagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 2541140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10693109 - 10693192
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||  |||||||||||| ||  |||||||||||||||    
T  10693109 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc--tcttttacacaagaggctgtttccaggacttg 10693192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21172045 - 21172128
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  21172045 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 21172128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 46354289 - 46354208
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| || ||||||||||||||||    
T  46354289 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttg 46354208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 33871954 - 33872030
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| |||||| ||||| ||||||  |||| ||||| |||||||||| || ||||||||||||||||    
T  33871954 gggaaggggtcccaccatttggtgtattgtacgcagccttatcctgt-ttttacacaagaggttgtttccaggacttg 33872030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 23419719 - 23419795
Alignment:
Q  10 ggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  ||||||||| |||||    
T  23419719 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttg 23419795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32758358 - 32758275
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||| ||  |||||||||  |||||||||| ||  |||||||||||||||    
T  32758358 cagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg--ttttacacaagaggctgtttccaggacttg 32758275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42391136 - 42391219
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| |   |||||||||||||||    
T  42391136 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaagctgtttccaggacttg 42391219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 47716554 - 47716473
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  47716554 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 47716473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 7645047 - 7644970
Alignment:
Q  10 ggaaggggtcccactattt-ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||| |||| || ||||| ||||| | |||||||||| |||||||||| ||  |||||||||||||||    
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttg 7644970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 14099049 - 14099126
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggactt 85  Q
    |||||||||||||||| |||||| ||||| ||||||  |||| ||||| |||||||||| ||  | ||||||||||||    
T  14099049 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggactt 14099126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 14409066 - 14409143
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggactt 85  Q
    |||||||||||||||| |||||| ||||| ||||||  |||| ||||| |||||||||| ||  | ||||||||||||    
T  14409066 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggactt 14409143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18512489 - 18512573
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||| || ||||| ||||||  |||||||| | |||||||||| |  ||||||||||||||||    
T  18512489 cagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgtttccaggacttg 18512573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40463975 - 40463891
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||| ||||||||||||| |||||| ||||||||||||  ||||||| || |||||||||| ||| |||||| | ||||||    
T  40463975 cagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagt-ttttacacaagagactgtttctatgacttg 40463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 19426939 - 19427010
Alignment:
Q  15 gggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||| |||||| ||||| ||||||  |||||||| | |||||||||| ||  |||||||||||||||    
T  19426939 gggtcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttg 19427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48735158 - 48735234
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttcca 79  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||  || |||||||||| || |||||||||    
T  48735158 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--gtgttttacacaagaggttgtttcca 48735234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 8148989 - 8149067
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtctttt-acacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| |||||| ||||| ||||||| |||||||| | |||| |||||| || | |||| |||||||||    
T  8148989 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttg 8149067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35334852 - 35334935
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||| || ||||| ||| ||  |||||||||| ||||||||   ||| |||||||||||||||    
T  35334852 cagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac--gagactgtttccaggacttg 35334935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 38262239 - 38262317
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||  |||||| ||||| || ||||  ||||| | | |||||||||| ||| |||||||||||||||    
T  38262239 cgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttg 38262317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 42805619 - 42805538
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||| ||  |||||||||| |||||||||| ||  |||||||||||||||    
T  42805619 ccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttg 42805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1408556 - 1408471
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||  ||||| ||| ||  |||||| ||| |||||||||| ||  | |||||||||||||    
T  1408556 cagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttg 1408471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 18747577 - 18747500
Alignment:
Q  10 ggaaggggtcccactatttggagtattatacgcaagcttaccctg-tcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||| | |||| ||||||||||||  ||||||||| | |||||||||| ||  |||||||| ||||||    
T  18747577 ggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttg 18747500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 32233179 - 32233255
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||  |||||| |||||| ||| |||||||   |||||||||| |||||||||| || ||||||||||||||||    
T  32233179 gggaaggaatcccaccatttggtgtaatatacgctgccttaccctgt-ttttacacaagaggttgtttccaggacttg 32233255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 42476961 - 42476887
Alignment:
Q  10 ggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||| |||||| ||||| ||||||  |||||| ||  |||||||||| ||| ||||||||| |||||    
T  42476961 ggaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacacaagagactgtttccagaacttg 42476887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 22699031 - 22699091
Alignment:
Q  26 tttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||| ||||||  |||||||||| |||||||||| ||| | |||||||||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttg 22699091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 31591151 - 31591228
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| ||||   ||||| ||||||  ||||| ||||  ||||||||| || ||||||||||||||||    
T  31591151 ccgggaaggggtcccaccatttattgtattgtacgcagccttactctgt--tttacacaagaggttgtttccaggacttg 31591228  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40272848 - 40272933
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| || ||||||||||||||||    
T  40272848 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttg 40272933  T

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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22122953 - 22123036
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||| |||||||||||||||    
T  22122953 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagagactgtttccaggacttg 22123036  T

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Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8247723 - 8247810
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||| ||||||| |||  ||| ||||| ||||||| |||||||||| |||||||||| ||  |||||||||||||||    
T  8247723 cagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttg 8247810  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10795459 - 10795546
Alignment:
Q  1 cagggcccgggaaggggtcccactattt--ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| || |||||||||||||| ||||  || ||||| ||||||  ||||||||||||||||||||| ||  |||||||||||||||    
T  10795459 cagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttg 10795546  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 39203629 - 39203552
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||||| ||||| ||||||| |||||||||  |||||||||| ||  |||||| ||||||||    
T  39203629 ccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacacaagaggctgtttcaaggacttg 39203552  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 46421071 - 46421158
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  46421071 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 46421158  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 22609880 - 22609802
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||| ||||||    
T  22609880 ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaagacttg 22609802  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1217209 - 1217126
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||| | |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  1217209 cagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 1217126  T

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Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31592968 - 31592885
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||| ||||||| |||||| ||||| ||||||  ||||||||||  ||||||||| ||  |||||||||||||||    
T  31592968 cagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgt--tttacacaagaggctgtttccaggacttg 31592885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 12914079 - 12914156
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||| ||| |||||| ||||| |||||   |||||||||| |||||||||| ||  |||||||||||||||    
T  12914079 gggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttg 12914156  T

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Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26573248 - 26573163
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||| |||||||||| | |||| ||||| ||||||  |||||||||| |||||||||  ||  |||||||||||||||    
T  26573248 cagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttg 26573163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30928183 - 30928268
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||| | | |||| ||||| ||| ||| |||||| ||| |||||||||| ||  |||||||||||||||    
T  30928183 cagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttg 30928268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47624162 - 47624098
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| ||||||||||    
T  47624162 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaa 47624098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13628826 - 13628913
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| | |||||||| ||  |||||||||||||||    
T  13628826 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttg 13628913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29366756 - 29366843
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| ||||| |||| ||  |||||||||||||||    
T  29366756 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttg 29366843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 34420685 - 34420765
Alignment:
Q  7 ccgggaaggggtcccactattt-ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||| || ||||  ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  34420685 ccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 34420765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 4495714 - 4495785
Alignment:
Q  15 gggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||| |||||| ||||| ||||||  |||||||||| |||||||||||||  | ||| |||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttg 4495785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 26869821 - 26869743
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| |||||||||||| |||||| ||||| ||||||  |||||||||| |||||||| | ||  |||||||||||||||    
T  26869821 ccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaccagaggctgtttccaggacttg 26869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 54032609 - 54032680
Alignment:
Q  15 gggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||| ||| || ||||| || |||  |||||||||| |||||||||| || ||||||||||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttg 54032680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 13730644 - 13730725
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||| ||  |||||||||| |||||||||| ||  |||||||||||||||    
T  13730644 ccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttg 13730725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 14987074 - 14986993
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||| ||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  14987074 ccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 14986993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15797341 - 15797287
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 55  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||||||    
T  15797341 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 15797287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34771400 - 34771454
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 55  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||||||    
T  34771400 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 34771454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 53996609 - 53996687
Alignment:
Q  9 gggaaggggtcccacta-tttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| | ||||| ||||| || |||  |||||||||| |||||||||| || ||||||||| ||||||    
T  53996609 gggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttg 53996687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 54374381 - 54374467
Alignment:
Q  1 cagggcccgggaaggggtcccacta-tttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| | ||||| | ||| ||||||  |||||||| | |||||||||| || ||||||||| ||||||    
T  54374381 cagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttg 54374467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 54484812 - 54484730
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctg-tcttttacacaatagattgtttccagga 82  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||| || | |||||||||| ||  |||||||||||    
T  54484812 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 31904906 - 31904975
Alignment:
Q  14 ggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggac 83  Q
    |||||||||| |||||| ||||| ||||||  | |||||||| ||||||| |||||  ||||||||||||    
T  31904906 ggggtcccaccatttggtgtattgtacgcagtcataccctgttttttacataataggctgtttccaggac 31904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45948874 - 45948955
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccagga 82  Q
    ||||| ||| ||||||||||||| | |||| ||||| || |||  |||||||| | |||||||||| || ||||||||||||    
T  45948874 cagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccagga 45948955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 16735555 - 16735507
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 55  Q
    ||||||||||||||||| |||||| ||||| ||||||  ||||||||||    
T  16735555 ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 16735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45786250 - 45786317
Alignment:
Q  1 cagggcccgggaaggggtcccac--tatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| |||||||||||||||||  | ||||| ||||| ||||||  |||||||||| ||||||||||    
T  45786250 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 45786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 52428526 - 52428578
Alignment:
Q  14 ggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| ||||||||||| ||||| ||||||  |||||||||| ||||||||||    
T  52428526 ggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaa 52428578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 55401288 - 55401212
Alignment:
Q  11 gaaggggtcccactattt-ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||| |||| || ||||||||||||  |||| ||||| |||||||||| ||  ||||| |||||||||    
T  55401288 gaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttg 55401212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 46930 - 46845
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||| |||||||| | |||||||||| || |||||||||| |||||    
T  46930 cagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttg 46845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 24815 - 24873
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    |||||||||||||||| |||||| || || ||||||  |||||||||| ||||||||||    
T  24815 cgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaa 24873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35261778 - 35261693
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| || |||||||||||||| |||||| ||||| ||||||| |||||||||| |||||||||| ||| |||||||||| ||||    
T  35261778 cagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttg 35261693  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36720895 - 36720810
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  36720895 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 36720810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29877193 - 29877111
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggac 83  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  ||||||||||||    
T  29877193 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28817662 - 28817747
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||| || ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  28817662 cagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 28817747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44530248 - 44530163
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| || |||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| || ||||||||| ||||||    
T  44530248 cagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttg 44530163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12670286 - 12670369
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  12670286 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 12670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5135325 - 5135410
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||| ||  |||||||| | |||||||||| ||  |||||||||||||||    
T  5135325 cagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttg 5135410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13160800 - 13160716
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||| ||||||||    
T  13160800 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttctaggacttg 13160716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8897800 - 8897884
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggactt 85  Q
    ||||| ||||||||||||||||| |||||| ||||| |||| |  |||||||| | ||||||||||  | |||||||||||||||    
T  8897800 cagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 8897884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 45071357 - 45071279
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  ||||||||| |||||    
T  45071357 ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccagaacttg 45071279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 7136569 - 7136650
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||  |||||||||| || ||||||||||||||||    
T  7136569 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttg 7136650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12625989 - 12625903
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtctttt-acacaatagattgtttccaggacttg 86  Q
    ||||| |||||| |||||||||| |||||| ||||| || |||  |||||||||| |||| |||||| || ||||||||||||||||    
T  12625989 cagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttg 12625903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 8483982 - 8484059
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| |||||||||| | |||| ||||| ||||||  ||| |||||| |||||||||| || ||||||||||||||||    
T  8483982 gggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttg 8484059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 44742564 - 44742640
Alignment:
Q  11 gaaggggtcccactattt-ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||| |||| || ||||| ||||||  |||||||||| |||||||||  ||||||||||||| |||||    
T  44742564 gaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttg 44742640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 44781587 - 44781627
Alignment:
Q  46 cttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  44781587 cttaccctgtcttttacacaagaggttgtttccaggacttg 44781627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 20870015 - 20869941
Alignment:
Q  10 ggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccagga 82  Q
    |||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||| |||||||||||    
T  20870015 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 17823668 - 17823590
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||| |||| |||||| ||||| ||||||  |||| ||||  |||||||||| ||  |||||||||||||||    
T  17823668 cgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttg 17823590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 23000261 - 23000338
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggactt 85  Q
    ||||||||||||||||| |||||| ||||| || | || |||||| ||| |||||||||| ||  ||||||||||||||    
T  23000261 ccgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgt-ttttacacaagaggctgtttccaggactt 23000338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30454133 - 30454216
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||  ||||||  |||||| ||  |||||||||| ||  |||||||||||||||    
T  30454133 cagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg--ttttacacaagaggctgtttccaggacttg 30454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 25250616 - 25250536
Alignment:
Q  8 cgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||| |||  ||| ||||| ||||||  | |||||| | |||||||||||||  |||||||||||||||    
T  25250616 cgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttg 25250536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 29521729 - 29521806
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| ||| |||||| |||||| ||||| ||||||  |||||||||| ||||| |||| ||  |||||||||||||||    
T  29521729 gggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttg 29521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 35106014 - 35105937
Alignment:
Q  10 ggaaggggtcccactatt-tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||| ||| ||| ||||| ||||||  ||||| || |||||||||||| || ||||||||||||||||    
T  35106014 ggaagaggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttg 35105937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 18164821 - 18164880
Alignment:
Q  26 tttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||| ||||||| |||||||||| |||||||||| ||  |||||||||||||||    
T  18164821 tttggtgtattgtacgcaaccttaccctgt-ttttacacaagaggctgtttccaggacttg 18164880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39461030 - 39461117
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||| ||| |||  ||| ||||| ||||||  ||||| |||| |||||||||| ||  |||||||||||||||    
T  39461030 cagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttg 39461117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8455352 - 8455437
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  8455352 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttg 8455437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21779297 - 21779380
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||| |||||||||  |||||||||| ||  ||| |||||||||||    
T  21779297 cagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacacaagaggctgtctccaggacttg 21779380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12023955 - 12024039
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||| |||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  12023955 cagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttg 12024039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 32781332 - 32781401
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttcc 78  Q
    ||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| || ||||||||    
T  32781332 gggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttcc 32781401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9671278 - 9671199
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccagga 82  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||    
T  9671278 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccagga 9671199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10546262 - 10546176
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctg-tcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||||| | ||||| |||| ||  |||||||||||||||    
T  10546262 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttg 10546176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 17623656 - 17623578
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||| |||| |||||| ||||| ||||||  |||||||||  |||||||||| || ||||||| ||||||||    
T  17623656 cgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttg 17623578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14444827 - 14444743
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||  ||| ||  |||||||||| |||||||||| ||  |||||||||||||||    
T  14444827 cagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt-ttttacacaagaggctgtttccaggacttg 14444743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 36871585 - 36871509
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggact 84  Q
    ||||||||||||||||| |||||| ||||| ||||||  |||||||||| ||| |||||| ||  |||||||||||||    
T  36871585 ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttcacacaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10543799 - 10543712
Alignment:
Q  1 cagggcccgggaaggggtcccactattt--ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||||  || ||||| ||||||  |||||||||| |||||||||| ||   ||||||||||||||    
T  10543799 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttg 10543712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24200659 - 24200746
Alignment:
Q  1 cagggcccgggaaggggtcccactattt--ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||| |||||| ||||  || ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  24200659 cagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 24200746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 17668091 - 17668016
Alignment:
Q  11 gaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||| |||| |||||| ||||| ||||||  |||||||||  |||||||||| || || |||||||||||||    
T  17668091 gaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttg 17668016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22371153 - 22371091
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacac 64  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| ||||||||    
T  22371153 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac 22371091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 25641593 - 25641516
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||| |||||| ||||| |||||||  ||||||||| ||| |||||| |   |||||||||||||||    
T  25641593 cgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgt-tttcacacaaaatgctgtttccaggacttg 25641516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 44521417 - 44521487
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttcca 79  Q
    |||||||| |||| | |||||| |||||||| |||  |||||| ||| |||||||||| ||||||||||||    
T  44521417 gggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttcca 44521487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14530419 - 14530332
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| |||| |  |||||||||| ||||| |||| ||  |||||||||||||||    
T  14530419 cagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccaggacttg 14530332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 29419970 - 29420010
Alignment:
Q  46 cttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttg 29420010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 7909324 - 7909397
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccagga 82  Q
    |||||||||||||||| |||||| ||||| ||||||| |||||||||| |||||||||| ||| |||||||||||    
T  7909324 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgt-ttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20225081 - 20224998
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| || ||||||||||||||||    
T  20225081 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggttgtttccaggacttg 20224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5306700 - 5306784
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||| |||||||||  |||||||||| ||  |||||||||||||||    
T  5306700 cagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-attttacacaagaggctgtttccaggacttg 5306784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5648357 - 5648273
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  5648357 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttg 5648273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 17043438 - 17043515
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  17043438 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttg 17043515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25463221 - 25463136
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| || || ||||||| ||| ||| || |||||||||| || ||||||||||||||||    
T  25463221 cagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttg 25463136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 47444056 - 47443971
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||| ||| ||  |||||||||||||||    
T  47444056 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttg 47443971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 37494939 - 37494865
Alignment:
Q  12 aaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||| ||||||  |||| || |||| |||||||||| |||||||||| || ||||||||||||||||    
T  37494939 aaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttg 37494865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47528566 - 47528649
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  47528566 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 47528649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30639478 - 30639394
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||| ||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  30639478 cagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagagtctgtttccaggacttg 30639394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 48598867 - 48598944
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  48598867 ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 48598944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20639694 - 20639777
Alignment:
Q  1 cagggcccgggaaggggtcccactattt-ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggac 83  Q
    ||||| ||||||||||||||||| |||| || ||||| ||||||  |||||||||| |||||||||| ||  ||||||||||||    
T  20639694 cagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9832349 - 9832432
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  ||||| |||||||||    
T  9832349 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgttttcaggacttg 9832432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 19027936 - 19027862
Alignment:
Q  12 aaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||| | |||| ||||| ||||||  |||||||||| |||||||||| |  ||||||||||||||||    
T  19027936 aaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttg 19027862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 25629147 - 25629069
Alignment:
Q  2 agggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccag 80  Q
    |||| ||||||||||||||||| |||||| ||||| ||| ||  |||||||| | |||||||||| ||| |||||||||    
T  25629147 agggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40915927 - 40915843
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||| |||||| |||||| ||||| ||||||  |||||| ||| |||||||||| ||  |||||||||||||||    
T  40915927 cagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgt-ttttacacaagaggctgtttccaggacttg 40915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 41018838 - 41018914
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||||||||| ||||| |||| |  ||||||||   |||||||||| || ||||||||||||||||    
T  41018838 gggaaggggtcccactatttggtgtattgtacgtagccttaccct-aattttacacaagaggttgtttccaggacttg 41018914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 9987879 - 9987955
Alignment:
Q  10 ggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||| |||||| ||||| || |||  |||||||| |  ||||||||| || ||||||||||||||||    
T  9987879 ggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttg 9987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23501888 - 23501821
Alignment:
Q  1 cagggcccgggaaggggtcccactat--ttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| ||||||||||||||||| ||  |||| ||||| ||||||| |||||||||| ||||||||||    
T  23501888 cagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaa 23501821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11054184 - 11054267
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||||| || | |||||| ||||| ||||||  |||||||||  |||||||||| ||| ||||| |||||||||    
T  11054184 cagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctg--ttttacacaagagactgttttcaggacttg 11054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 16408643 - 16408724
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||| |||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  16408643 ccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttg 16408724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29207934 - 29207988
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 55  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||||||    
T  29207934 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 29207988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 54967112 - 54967035
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||||||||| ||||||  |||| || |||| |||||||||| |||||||||| || || ||||||| |||||    
T  54967112 cgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttg 54967035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 13256442 - 13256502
Alignment:
Q  8 cgggaaggggtcccactat--ttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    |||||||||||||||||||  |||| ||||| ||||||  |||||||||| ||||||||||    
T  13256442 cgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaa 13256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14983933 - 14983868
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| ||||||||||||||||| |||| | ||||| || |||| |||||||| | ||||||||||    
T  14983933 cagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaa 14983868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51865074 - 51865139
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| ||||||||||| ||||| |||||| ||||| ||||||  |||||| ||| ||||||||||    
T  51865074 cagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaa 51865139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 35894503 - 35894571
Alignment:
Q  7 ccgggaaggggtcccactattt-ggagtattatacgcaagcttaccctgtcttttacacaatagattgt 74  Q
    ||||||||||||||||| |||| || ||||| ||||||  |||||| ||| |||||||||||| |||||    
T  35894503 ccgggaaggggtcccaccattttggtgtattgtacgcacacttaccgtgttttttacacaatatattgt 35894571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11596634 - 11596550
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| || |||||||||||||| |||||| ||||||||||||  |||||||||| |||||||||| || ||||||| ||||||||    
T  11596634 cagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-ttttacacaagaggttgtttctaggacttg 11596550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 41319849 - 41319926
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggactt 85  Q
    |||||||||||||||  |||||| ||||| ||||||  |||||||||| |||||||||| ||| ||||||||||||||    
T  41319849 cgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggactt 41319926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 46247989 - 46248074
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||| ||||||    
T  46247989 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttg 46248074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 46991926 - 46991841
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||| || ||||| ||| ||  |||||||||| |||||||||| || ||||||||||||||||    
T  46991926 cagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttg 46991841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20036343 - 20036257
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtct-tttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||||| |||| |||||| |||||  |||||| |||||||| ||| ||||||||| || ||||||||||||||||    
T  20036343 cagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttg 20036257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 47214623 - 47214548
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| |||||| ||||| ||||||| |||||||||  ||||| |||| ||| |||||||||||||||    
T  47214623 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttaaacaagagactgtttccaggacttg 47214548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14617160 - 14617075
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||| |||||| |||||| ||||| ||||||| |||||| |||  ||||||||| ||  |||||||||||||||    
T  14617160 cagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttg 14617075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 25468307 - 25468384
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||| ||||| || |||||| ||||| ||||||| |||||||||  |||||||||| || ||||||||||||||||    
T  25468307 gggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 32632601 - 32632677
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  32632601 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttg 32632677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 44485151 - 44485228
Alignment:
Q  7 ccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggact 84  Q
    |||||||||||||| || |||||| ||||| ||||||  |||||| ||||||||||||||  | ||||||||||||||    
T  44485151 ccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggact 44485228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10668349 - 10668262
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| ||||||| |||||| ||| |||||||||| ||  |||||||||||||||    
T  10668349 cagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccaggacttg 10668262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 18724582 - 18724666
Alignment:
Q  2 agggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| ||||||||||||||||  |||||| ||||| ||| ||  |||||||||| |||||||||| ||  |||||||||||||||    
T  18724582 agggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttg 18724666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 30395768 - 30395849
Alignment:
Q  7 ccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||||||||    
T  30395768 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttg 30395849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34725134 - 34725217
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||| | ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  34725134 cagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 34725217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35253223 - 35253306
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||| ||||||||    
T  35253223 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttcgaggacttg 35253306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4349760 - 4349699
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttac 62  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||| ||||||    
T  4349760 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18944767 - 18944680
Alignment:
Q  1 cagggcccgggaaggggtcccactat--ttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||  |||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||||| ||||    
T  18944767 cagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttg 18944680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12126873 - 12126927
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 55  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  ||||||||||    
T  12126873 cagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgt 12126927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 45812581 - 45812656
Alignment:
Q  9 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| |||||| ||||| || |||  |||||||  |||||||||||| ||| ||||| |||||||||    
T  45812581 gggaaggggtcccaccatttggtgtattgtatgcagccttaccc--tcttttacacaagagactgttttcaggacttg 45812656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6925222 - 6925137
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||| || ||||| | ||||  |||||||| | |||||||||| ||  | |||||||||||||    
T  6925222 cagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttg 6925137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 21910692 - 21910737
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccct 53  Q
    |||||||||||||||| |||||| ||||| ||||||| ||||||||    
T  21910692 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct 21910737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22930105 - 22930188
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| || |||||||||||||| |||||| ||||| | | ||| |||||||||| |||||||||| ||  |||||||||||||||    
T  22930105 cagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgt-ttttacacaaaaggctgtttccaggacttg 22930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31382250 - 31382330
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccagga 82  Q
    ||||| || |||||||||||||| |||||| ||||| ||||||  |||| ||||| |||||||||| ||  |||||||||||    
T  31382250 cagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgt-ttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6983847 - 6983907
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtctttta 61  Q
    ||||| |||| |||||||||||| |||||| ||||| ||||||  |||||||||| |||||    
T  6983847 cagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgtttttta 6983907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 15505679 - 15505631
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtc 56  Q
    |||||||||||||||| |||||| ||||| ||||||  |||||||||||    
T  15505679 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtc 15505631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19932789 - 19932856
Alignment:
Q  1 cagggcccgggaaggggtcccac--tatttggagtattatacgcaagcttaccctgtcttttacacaa 66  Q
    ||||| |||||||||||||||||  | ||||| ||||| ||||||  |||||||||| ||||||||||    
T  19932789 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 22327176 - 22327136
Alignment:
Q  46 cttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  22327176 cttaccctgttttttacacaagaggttgtttccaggacttg 22327136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 2166447 - 2166533
Alignment:
Q  2 agggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| ||||||||||||||||| |||  ||| ||||| ||||||| |||| ||||| |||||||||| || ||||||||||||||||    
T  2166447 agggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttg 2166533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 2178080 - 2178166
Alignment:
Q  2 agggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| ||||||||||||||||| |||  ||| ||||| ||||||| |||| ||||| |||||||||| || ||||||||||||||||    
T  2178080 agggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttg 2178166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1354793 - 1354876
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  |||||||||||||||    
T  1354793 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttccaggacttg 1354876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1347061 - 1346978
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  ||||||||||  |  |||||||||||||||    
T  1347061 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagtggctgtttccaggacttg 1346978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12221951 - 12222038
Alignment:
Q  1 cagggcccgggaaggggtcccactat--ttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| ||  |||| ||||| ||||||  |||||||||| |||||||||| ||  |||||||| ||||||    
T  12221951 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttg 12222038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29355891 - 29355978
Alignment:
Q  1 cagggcccgggaaggggtcccactatt--tggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||  ||| ||||| ||||||  |||||||||| | |||||||| ||  |||||||||||||||    
T  29355891 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttg 29355978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 3815120 - 3815198
Alignment:
Q  8 cgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||||| ||||||||| |||||| ||||| ||||||  | |||| | | |||||||||||||  |||||||||||||||    
T  3815120 cgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttg 3815198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33138932 - 33138847
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||| || ||||||||| |||||| ||||| |||||   ||||| |||| ||||| |||| || ||||||||||||||||    
T  33138932 cagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttg 33138847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 20400752 - 20400688
Alignment:
Q  15 gggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttcca 79  Q
    ||||||| |||||| | ||| | ||||||  |||||||||| |||||||||| ||||||||||||    
T  20400752 gggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttcca 20400688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 23240870 - 23240943
Alignment:
Q  11 gaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||| | ||||  |||| ||||||| |||||||||  |||||||||| ||  |||||||||||||||    
T  23240870 gaaggggtcccaccaattggtatattgtacgcaaacttaccctg--ttttacacaagaggctgtttccaggacttg 23240943  T

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Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10086 - 10169
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||  ||||| |||  |||||||||| ||  |||||||||||||||    
T  10086 cagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaagaggctgtttccaggacttg 10169  T

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Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20414 - 20497
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||  ||||| |||  |||||||||| ||  |||||||||||||||    
T  20414 cagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaagaggctgtttccaggacttg 20497  T

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Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30676 - 30593
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  | |||||||  |||||||||| ||  |||||||||||||||    
T  30676 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg--ttttacacaagaggctgtttccaggacttg 30593  T

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Target: scaffold0254 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 4258 - 4171
Alignment:
Q  2 agggcccgggaaggggtcccac---tatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    |||| |||||||||||||||||   |  |||| ||||| ||||||| |||| ||||| |||||||||| || ||||||||||||||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttg 4171  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10909 - 10834
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgttt 76  Q
    ||||| ||||||||||||||||| |||||| |||||  |||||  | |||||||| |||||||||| || ||||||    
T  10909 cagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48670 - 48746
Alignment:
Q  1 cagggcccgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaatagattgtttcca 79  Q
    ||||| ||||||||||||||||| |||||| ||||| ||||||  |||||||||  |||||||||| ||  ||||||||    
T  48670 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgtttcca 48746  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 59070 - 58991
Alignment:
Q  9 gggaaggggtcccactattt--ggagtattatacgcaagcttaccctgtcttttacacaatagattgtttccaggacttg 86  Q
    ||||||||||||||| ||||  || ||||| ||||||  |||||||||| ||||| |||| ||  |||||||||||||||    
T  59070 gggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttg 58991  T

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