View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7120_low_11 (Length: 260)
Name: NF7120_low_11
Description: NF7120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7120_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 9955682 - 9955929
Alignment:
| Q |
1 |
cgggtttgagtgaagtcacaagtccgtgaacac--acaaagtcagcaagtcagtggtaatatagtcaagataaaacaacccaaattttaatattgaaact |
98 |
Q |
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| T |
9955682 |
cgggtttaagtgaagccacaagttcgtgaacacacacaaagtcggcaagtcagtggtaatatagtcaagataaaacaacccaaattttaatattgaaact |
9955781 |
T |
|
| Q |
99 |
ttctattaaacgaaaatcaaaggtttatttaaatgttcgttcgtgatcagatgactttaatgtgttcaccgcatgacctgaatgcatgtactattgacta |
198 |
Q |
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| T |
9955782 |
ttatattaaacgaaaatcaaaggtttatttaaatgttcgttcgtgatcagatgactttaatgtgttcaccgcatcacctgaatgcatgtactgttgacta |
9955881 |
T |
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| Q |
199 |
tatttaattcaaattcgttcaattggattaaatttagatgcactcaca |
246 |
Q |
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| T |
9955882 |
tatttaattcaaattcgttcaattggattaagtttagatgcactcaca |
9955929 |
T |
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