View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7121_high_6 (Length: 284)
Name: NF7121_high_6
Description: NF7121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7121_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 32950174 - 32949919
Alignment:
| Q |
18 |
tttaatagatgacaaaactctcgttgagttgggtaggactgcaattttagtcggggatcaaattcagattcttttgattgatttgtcgttaactgaagtt |
117 |
Q |
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| T |
32950174 |
tttaatagatgacaaaactctcgttgagttgggtaggactgcaattttagtcggggatcaaattcagattctcttgattgatttgtcgttaactgaagtt |
32950075 |
T |
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| Q |
118 |
cattaatcacgtgaatccaattgttacattgcaaaatgcaaataatgacattacccctggaaacctttatgttataca-tttcagagattttatatccgt |
216 |
Q |
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| T |
32950074 |
cattaatcacgtgaatccaattgttacattgcaaaatgcaaataatgacattaccactggaaacctttatgttatacagtttcagagattttatatccgt |
32949975 |
T |
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| Q |
217 |
tgtttcatggctaattccaactacaagtcaatatttcttttatgggttttaatatt |
272 |
Q |
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| T |
32949974 |
tgtttcatggctaattccaactacaagccaatatttcttttatgggttttaatatt |
32949919 |
T |
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