View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7122_low_10 (Length: 269)
Name: NF7122_low_10
Description: NF7122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7122_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 4032760 - 4032998
Alignment:
| Q |
14 |
tggacatcattcggaatatcaccagagaaagaattatcggagaggtcgagattctggagtcgtggaacggtgcagacagaagccggaaacggaccggaga |
113 |
Q |
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| T |
4032760 |
tggatatcattcggaatatcaccagagaaagaattatcggagaggtcgagattctggagtcgtggaacggtgcagacagaagccggaaacggaccggaga |
4032859 |
T |
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| Q |
114 |
gattattccggtgaagaaaaatactatgaagtgcagtagcattaaacaactgaaccggaacaacaccatagaattcattatcatgaagattaagacgtcg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4032860 |
gattattccggtgaagaaaaatactatgaagtgcagtagcattaaacaactgaaccggaacaacaccatagaattcattatcatgaagattaagacgtcg |
4032959 |
T |
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| Q |
214 |
aagatagcgaagcatgccgagctcagacggaatgtatcc |
252 |
Q |
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| T |
4032960 |
aagatagcgaagcatgccgagctcagacggaatgtatcc |
4032998 |
T |
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