View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7123_low_5 (Length: 212)

Name: NF7123_low_5
Description: NF7123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7123_low_5
NF7123_low_5
[»] chr3 (64 HSPs)
chr3 (1-212)||(24283589-24283800)
chr3 (1-212)||(42110013-42110224)
chr3 (1-200)||(14288179-14288377)
chr3 (1-212)||(35985512-35985720)
chr3 (42-212)||(14570624-14570793)
chr3 (2-212)||(13054720-13054940)
chr3 (139-212)||(12960676-12960749)
chr3 (111-212)||(13036232-13036333)
chr3 (139-212)||(15954238-15954311)
chr3 (147-212)||(54091046-54091111)
chr3 (148-212)||(12361816-12361880)
chr3 (148-212)||(32387330-32387394)
chr3 (1-63)||(12270482-12270544)
chr3 (1-63)||(14647032-14647094)
chr3 (151-212)||(4677996-4678057)
chr3 (139-212)||(12537007-12537080)
chr3 (139-212)||(18718424-18718497)
chr3 (151-212)||(41176309-41176370)
chr3 (151-212)||(41181447-41181508)
chr3 (151-212)||(44776035-44776096)
chr3 (151-212)||(44781219-44781280)
chr3 (148-212)||(11644102-11644166)
chr3 (148-212)||(12275083-12275147)
chr3 (148-212)||(12355317-12355381)
chr3 (148-212)||(20376554-20376618)
chr3 (148-212)||(30596171-30596235)
chr3 (148-212)||(53871958-53872022)
chr3 (149-212)||(13910364-13910427)
chr3 (149-212)||(13940820-13940883)
chr3 (149-212)||(13947309-13947372)
chr3 (1-63)||(19444649-19444712)
chr3 (1-63)||(19451215-19451278)
chr3 (2-63)||(8579245-8579306)
chr3 (151-212)||(8742194-8742255)
chr3 (151-212)||(8760364-8760425)
chr3 (139-212)||(12256396-12256469)
chr3 (2-63)||(14085593-14085654)
chr3 (2-63)||(14090994-14091055)
chr3 (111-212)||(15519291-15519392)
chr3 (147-212)||(16829253-16829318)
chr3 (147-212)||(16837775-16837840)
chr3 (2-63)||(49400593-49400654)
chr3 (148-212)||(11964223-11964287)
chr3 (140-212)||(12364200-12364272)
chr3 (148-212)||(12478991-12479055)
chr3 (148-212)||(13692756-13692820)
chr3 (148-212)||(15934242-15934306)
chr3 (148-212)||(16823095-16823159)
chr3 (148-212)||(19343579-19343643)
chr3 (1-85)||(51854278-51854362)
chr3 (1-85)||(53570407-53570491)
chr3 (1-85)||(54832385-54832469)
chr3 (3-60)||(10988813-10988870)
chr3 (2-63)||(24122258-24122319)
chr3 (159-208)||(29551713-29551762)
chr3 (148-212)||(10596966-10597030)
chr3 (148-212)||(10768531-10768595)
chr3 (148-212)||(12203111-12203175)
chr3 (148-212)||(14652026-14652090)
chr3 (148-212)||(18127855-18127919)
chr3 (148-212)||(18135625-18135689)
chr3 (148-212)||(45612429-45612493)
chr3 (148-208)||(46070422-46070482)
chr3 (148-212)||(49163940-49164004)
[»] chr5 (36 HSPs)
chr5 (1-212)||(21900998-21901208)
chr5 (1-212)||(18819708-18819917)
chr5 (42-212)||(25014384-25014554)
chr5 (1-212)||(10035945-10036155)
chr5 (1-212)||(21495694-21495904)
chr5 (111-212)||(21889383-21889484)
chr5 (140-212)||(16774350-16774422)
chr5 (148-212)||(23443517-23443581)
chr5 (111-212)||(15193247-15193348)
chr5 (1-63)||(43242510-43242572)
chr5 (2-63)||(22757818-22757879)
chr5 (148-208)||(5337658-5337718)
chr5 (148-212)||(28259229-28259293)
chr5 (149-212)||(9776307-9776370)
chr5 (149-212)||(17264073-17264136)
chr5 (149-212)||(17270555-17270618)
chr5 (153-212)||(21677550-21677609)
chr5 (149-212)||(22175841-22175904)
chr5 (2-63)||(1856482-1856543)
chr5 (2-63)||(21674452-21674513)
chr5 (148-212)||(757581-757645)
chr5 (148-212)||(6403783-6403847)
chr5 (148-212)||(20843864-20843928)
chr5 (148-212)||(20938428-20938492)
chr5 (148-212)||(22499855-22499919)
chr5 (4-139)||(24594069-24594205)
chr5 (149-212)||(37539261-37539324)
chr5 (149-212)||(37546805-37546868)
chr5 (1-30)||(26754490-26754519)
chr5 (148-212)||(428018-428082)
chr5 (148-212)||(5581593-5581657)
chr5 (148-212)||(15462211-15462275)
chr5 (148-212)||(19363365-19363429)
chr5 (148-212)||(19801201-19801265)
chr5 (148-212)||(21830335-21830399)
chr5 (148-212)||(22312111-22312175)
[»] scaffold0053 (2 HSPs)
scaffold0053 (1-212)||(45875-46085)
scaffold0053 (1-212)||(72046-72256)
[»] chr6 (41 HSPs)
chr6 (1-212)||(23106021-23106231)
chr6 (76-212)||(17414824-17414959)
chr6 (91-212)||(18786901-18787022)
chr6 (2-163)||(14725226-14725387)
chr6 (2-63)||(8759447-8759508)
chr6 (139-212)||(13127568-13127641)
chr6 (148-212)||(14132324-14132388)
chr6 (148-212)||(22797804-22797868)
chr6 (76-155)||(21470670-21470749)
chr6 (1-47)||(14995240-14995286)
chr6 (76-154)||(21477171-21477249)
chr6 (139-212)||(10470020-10470093)
chr6 (151-212)||(13200807-13200868)
chr6 (151-212)||(14033976-14034037)
chr6 (2-63)||(14593632-14593693)
chr6 (151-208)||(18315266-18315323)
chr6 (148-212)||(8068988-8069052)
chr6 (148-212)||(14615568-14615632)
chr6 (2-53)||(8767208-8767259)
chr6 (149-212)||(13941222-13941285)
chr6 (149-212)||(27561817-27561880)
chr6 (149-212)||(28289484-28289547)
chr6 (149-212)||(33681533-33681596)
chr6 (1-63)||(7430584-7430646)
chr6 (139-181)||(19587860-19587902)
chr6 (150-208)||(27768153-27768211)
chr6 (139-212)||(14374647-14374720)
chr6 (147-212)||(19468652-19468717)
chr6 (151-212)||(23835889-23835950)
chr6 (76-137)||(25773466-25773527)
chr6 (151-212)||(28359136-28359197)
chr6 (148-212)||(1593563-1593627)
chr6 (148-212)||(19727440-19727504)
chr6 (148-212)||(21724036-21724100)
chr6 (79-155)||(22888870-22888946)
chr6 (148-212)||(23232699-23232763)
chr6 (148-212)||(24721427-24721491)
chr6 (1-54)||(29266344-29266396)
chr6 (148-212)||(2709185-2709249)
chr6 (148-212)||(19819703-19819767)
chr6 (1-53)||(22347485-22347536)
[»] chr8 (36 HSPs)
chr8 (1-212)||(22744532-22744742)
chr8 (1-212)||(20007064-20007274)
chr8 (1-212)||(14593887-14594099)
chr8 (1-212)||(20004848-20005059)
chr8 (91-212)||(20773296-20773417)
chr8 (91-212)||(20783090-20783211)
chr8 (1-212)||(33089706-33089916)
chr8 (2-163)||(21299313-21299474)
chr8 (2-212)||(25623801-25624011)
chr8 (1-212)||(20011253-20011464)
chr8 (150-212)||(21685368-21685430)
chr8 (150-212)||(21689717-21689779)
chr8 (148-212)||(41008754-41008818)
chr8 (148-212)||(11391880-11391944)
chr8 (1-63)||(3698665-3698727)
chr8 (2-155)||(10607759-10607914)
chr8 (151-212)||(18680809-18680870)
chr8 (149-212)||(9272461-9272524)
chr8 (150-212)||(19987480-19987541)
chr8 (1-54)||(19989908-19989961)
chr8 (151-212)||(22056552-22056613)
chr8 (2-63)||(23826202-23826263)
chr8 (151-212)||(31567117-31567178)
chr8 (151-212)||(31572338-31572399)
chr8 (2-63)||(44432923-44432984)
chr8 (148-208)||(12303988-12304048)
chr8 (148-212)||(20258283-20258347)
chr8 (148-212)||(21044913-21044977)
chr8 (149-212)||(1803792-1803855)
chr8 (148-212)||(1264859-1264923)
chr8 (148-212)||(14745793-14745857)
chr8 (148-212)||(16266143-16266207)
chr8 (148-212)||(21682974-21683037)
chr8 (168-212)||(22062884-22062928)
chr8 (168-212)||(36445066-36445110)
chr8 (148-212)||(37240370-37240434)
[»] chr7 (57 HSPs)
chr7 (1-212)||(12695418-12695628)
chr7 (9-200)||(23443030-23443220)
chr7 (1-212)||(14249670-14249881)
chr7 (1-212)||(14265140-14265351)
chr7 (5-212)||(20752073-20752280)
chr7 (5-212)||(19152674-19152881)
chr7 (1-212)||(19146353-19146564)
chr7 (1-212)||(20745752-20745963)
chr7 (81-212)||(15143029-15143160)
chr7 (111-212)||(45186265-45186366)
chr7 (139-212)||(13318514-13318587)
chr7 (148-212)||(16073252-16073316)
chr7 (148-212)||(19463468-19463532)
chr7 (148-212)||(46681475-46681539)
chr7 (1-63)||(27565890-27565952)
chr7 (1-63)||(38829122-38829184)
chr7 (151-212)||(806280-806341)
chr7 (151-212)||(11631222-11631283)
chr7 (139-212)||(12462308-12462381)
chr7 (111-212)||(14580804-14580905)
chr7 (139-212)||(15103614-15103687)
chr7 (111-212)||(15436817-15436918)
chr7 (151-212)||(18048512-18048573)
chr7 (151-212)||(18054991-18055052)
chr7 (148-212)||(10520613-10520677)
chr7 (148-212)||(11340532-11340596)
chr7 (148-212)||(12555268-12555332)
chr7 (148-212)||(14129030-14129094)
chr7 (148-212)||(14135876-14135940)
chr7 (148-212)||(14432848-14432912)
chr7 (152-212)||(15097251-15097311)
chr7 (148-212)||(17181994-17182058)
chr7 (148-212)||(18436506-18436570)
chr7 (149-212)||(23200777-23200840)
chr7 (149-212)||(23506904-23506967)
chr7 (149-212)||(29796557-29796620)
chr7 (149-212)||(29800376-29800439)
chr7 (111-212)||(14168797-14168898)
chr7 (111-212)||(14173044-14173145)
chr7 (2-63)||(19617357-19617418)
chr7 (151-212)||(20579247-20579308)
chr7 (151-212)||(35962018-35962079)
chr7 (148-212)||(12454851-12454915)
chr7 (148-212)||(14287403-14287467)
chr7 (148-212)||(15722494-15722558)
chr7 (148-212)||(16475418-16475482)
chr7 (149-212)||(16184738-16184801)
chr7 (149-212)||(23665103-23665166)
chr7 (1-54)||(41781047-41781100)
chr7 (148-212)||(3328622-3328686)
chr7 (148-212)||(11879858-11879922)
chr7 (148-212)||(12429650-12429714)
chr7 (148-212)||(13963319-13963383)
chr7 (148-212)||(14280937-14281001)
chr7 (148-212)||(15085244-15085308)
chr7 (148-212)||(19600629-19600693)
chr7 (148-212)||(46348035-46348099)
[»] scaffold0019 (1 HSPs)
scaffold0019 (2-212)||(13439-13648)
[»] chr1 (34 HSPs)
chr1 (1-211)||(41315061-41315270)
chr1 (1-212)||(21986039-21986249)
chr1 (1-212)||(21733558-21733768)
chr1 (1-212)||(21744738-21744949)
chr1 (1-212)||(5381456-5381666)
chr1 (139-212)||(21409952-21410025)
chr1 (103-212)||(30490686-30490795)
chr1 (140-212)||(21698924-21698996)
chr1 (1-63)||(2332062-2332124)
chr1 (148-212)||(4231980-4232044)
chr1 (148-212)||(11140391-11140455)
chr1 (148-212)||(19859984-19860048)
chr1 (148-212)||(21921586-21921650)
chr1 (149-212)||(27281027-27281090)
chr1 (111-209)||(31926562-31926660)
chr1 (2-63)||(21543118-21543179)
chr1 (147-212)||(22434239-22434304)
chr1 (151-212)||(23065965-23066026)
chr1 (2-63)||(42094944-42095005)
chr1 (148-212)||(47484898-47484962)
chr1 (148-212)||(15315789-15315853)
chr1 (148-212)||(20243371-20243435)
chr1 (148-212)||(20595397-20595461)
chr1 (148-212)||(21735953-21736017)
chr1 (148-212)||(23713022-23713086)
chr1 (148-212)||(29553733-29553797)
chr1 (148-212)||(29601551-29601615)
chr1 (111-206)||(19336599-19336694)
chr1 (148-212)||(954374-954438)
chr1 (148-212)||(3706050-3706114)
chr1 (148-212)||(16882837-16882901)
chr1 (148-212)||(18026013-18026077)
chr1 (148-212)||(24237692-24237756)
chr1 (148-212)||(49328823-49328887)
[»] scaffold0244 (2 HSPs)
scaffold0244 (1-212)||(14430-14640)
scaffold0244 (1-212)||(621-831)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-212)||(27124-27335)
[»] scaffold0462 (1 HSPs)
scaffold0462 (5-212)||(8371-8578)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-212)||(2061-2271)
scaffold0139 (148-212)||(26706-26770)
[»] chr2 (42 HSPs)
chr2 (1-212)||(21120758-21120969)
chr2 (1-212)||(25365060-25365270)
chr2 (1-163)||(22795799-22795961)
chr2 (1-210)||(17634724-17634933)
chr2 (1-212)||(20913469-20913681)
chr2 (3-212)||(24668966-24669174)
chr2 (142-212)||(19036310-19036380)
chr2 (152-212)||(25106756-25106816)
chr2 (139-212)||(20724841-20724914)
chr2 (151-212)||(27786529-27786590)
chr2 (151-212)||(27791750-27791811)
chr2 (152-212)||(8889256-8889316)
chr2 (148-212)||(15642572-15642636)
chr2 (148-212)||(19702766-19702830)
chr2 (149-212)||(10684915-10684978)
chr2 (140-207)||(24659606-24659673)
chr2 (149-212)||(27295283-27295346)
chr2 (150-212)||(25174697-25174759)
chr2 (2-63)||(6743300-6743361)
chr2 (159-212)||(12573144-12573197)
chr2 (139-212)||(19648820-19648893)
chr2 (111-212)||(23753617-23753718)
chr2 (151-212)||(36801346-36801407)
chr2 (2-63)||(43694462-43694523)
chr2 (148-212)||(4078213-4078277)
chr2 (148-212)||(22860797-22860861)
chr2 (140-212)||(24653144-24653216)
chr2 (148-212)||(25268031-25268095)
chr2 (148-212)||(28970552-28970616)
chr2 (148-212)||(32910764-32910828)
chr2 (173-212)||(23291753-23291792)
chr2 (1-63)||(21132582-21132644)
chr2 (142-212)||(22012408-22012478)
chr2 (1-85)||(30195652-30195736)
chr2 (2-63)||(201683-201744)
chr2 (159-212)||(12579626-12579679)
chr2 (2-63)||(22841919-22841980)
chr2 (148-212)||(34844-34908)
chr2 (140-212)||(23333393-23333465)
chr2 (148-212)||(23672003-23672067)
chr2 (148-212)||(27730280-27730344)
chr2 (148-212)||(44090365-44090429)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-212)||(13253-13464)
[»] scaffold0039 (2 HSPs)
scaffold0039 (1-212)||(2921-3132)
scaffold0039 (149-212)||(95582-95645)
[»] scaffold0028 (3 HSPs)
scaffold0028 (1-212)||(91739-91949)
scaffold0028 (2-63)||(46033-46094)
scaffold0028 (2-63)||(51437-51498)
[»] scaffold2016 (1 HSPs)
scaffold2016 (9-200)||(1-191)
[»] scaffold0669 (1 HSPs)
scaffold0669 (76-212)||(931-1068)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-209)||(17321-17529)
scaffold0005 (148-212)||(259507-259571)
scaffold0005 (148-212)||(265922-265986)
[»] chr4 (33 HSPs)
chr4 (1-209)||(14822180-14822388)
chr4 (148-212)||(13480286-13480350)
chr4 (139-212)||(21882332-21882405)
chr4 (111-212)||(30239850-30239951)
chr4 (148-212)||(16485474-16485538)
chr4 (148-212)||(18272093-18272157)
chr4 (151-212)||(15325702-15325763)
chr4 (151-212)||(41799232-41799293)
chr4 (151-212)||(42702061-42702122)
chr4 (151-212)||(51601353-51601414)
chr4 (151-212)||(51607234-51607295)
chr4 (151-212)||(53748035-53748096)
chr4 (148-212)||(1584648-1584712)
chr4 (148-212)||(15004425-15004489)
chr4 (148-212)||(15547387-15547451)
chr4 (148-212)||(16228403-16228467)
chr4 (149-212)||(635041-635104)
chr4 (149-212)||(16445761-16445824)
chr4 (2-63)||(11201406-11201468)
chr4 (2-63)||(11208137-11208199)
chr4 (151-212)||(16999448-16999509)
chr4 (139-212)||(18165560-18165633)
chr4 (148-212)||(14063544-14063608)
chr4 (148-212)||(23122434-23122498)
chr4 (148-212)||(23724078-23724142)
chr4 (148-212)||(41528369-41528433)
chr4 (148-211)||(14507032-14507095)
chr4 (149-208)||(20941099-20941158)
chr4 (139-212)||(13454557-13454630)
chr4 (148-212)||(3259270-3259334)
chr4 (1-37)||(3863290-3863326)
chr4 (1-37)||(3872047-3872083)
chr4 (148-212)||(7359987-7360051)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-212)||(5919-6131)
[»] scaffold0108 (1 HSPs)
scaffold0108 (77-212)||(46332-46467)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-200)||(71397-71595)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-200)||(124068-124265)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-212)||(143490-143701)
scaffold0026 (1-211)||(36392-36600)
scaffold0026 (148-212)||(62500-62564)
scaffold0026 (2-30)||(67216-67244)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-212)||(42073-42284)
scaffold0049 (1-212)||(52768-52979)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-212)||(23823-24033)
scaffold0266 (15-212)||(2743-2939)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-212)||(21670-21879)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-212)||(40796-41007)
[»] scaffold0081 (1 HSPs)
scaffold0081 (148-212)||(55229-55293)
[»] scaffold0054 (2 HSPs)
scaffold0054 (103-212)||(61257-61366)
scaffold0054 (103-212)||(59694-59803)
[»] scaffold0326 (2 HSPs)
scaffold0326 (111-212)||(4638-4739)
scaffold0326 (111-212)||(19820-19921)
[»] scaffold0178 (1 HSPs)
scaffold0178 (3-212)||(26261-26468)
[»] scaffold1290 (1 HSPs)
scaffold1290 (111-212)||(517-618)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-164)||(6391-6555)
[»] scaffold0102 (1 HSPs)
scaffold0102 (148-212)||(30636-30700)
[»] scaffold0025 (2 HSPs)
scaffold0025 (148-212)||(71915-71979)
scaffold0025 (139-212)||(77547-77620)
[»] scaffold0121 (1 HSPs)
scaffold0121 (76-212)||(10070-10205)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-200)||(100029-100227)
scaffold0003 (2-70)||(80307-80376)
[»] scaffold0124 (2 HSPs)
scaffold0124 (77-212)||(10060-10195)
scaffold0124 (151-212)||(41334-41395)
[»] scaffold1853 (1 HSPs)
scaffold1853 (103-212)||(92-201)
[»] scaffold0661 (1 HSPs)
scaffold0661 (103-212)||(3304-3413)
[»] scaffold0301 (1 HSPs)
scaffold0301 (139-212)||(12692-12765)
[»] scaffold0261 (1 HSPs)
scaffold0261 (139-212)||(8553-8626)
[»] scaffold0023 (1 HSPs)
scaffold0023 (139-212)||(152627-152700)
[»] scaffold0708 (1 HSPs)
scaffold0708 (148-212)||(2709-2773)
[»] scaffold0205 (1 HSPs)
scaffold0205 (148-212)||(28067-28131)
[»] scaffold0011 (5 HSPs)
scaffold0011 (148-212)||(147772-147836)
scaffold0011 (111-212)||(187084-187185)
scaffold0011 (111-212)||(196711-196812)
scaffold0011 (148-212)||(154959-155023)
scaffold0011 (2-63)||(173615-173676)
[»] scaffold0298 (1 HSPs)
scaffold0298 (76-212)||(19153-19288)
[»] scaffold0035 (3 HSPs)
scaffold0035 (149-212)||(194-257)
scaffold0035 (148-212)||(11242-11306)
scaffold0035 (139-212)||(1361-1434)
[»] scaffold0203 (1 HSPs)
scaffold0203 (2-163)||(16417-16578)
[»] scaffold0061 (1 HSPs)
scaffold0061 (2-163)||(56354-56515)
[»] scaffold0017 (2 HSPs)
scaffold0017 (2-163)||(142118-142279)
scaffold0017 (139-212)||(2241-2314)
[»] scaffold0790 (1 HSPs)
scaffold0790 (43-198)||(5310-5465)
[»] scaffold0323 (1 HSPs)
scaffold0323 (139-212)||(8075-8148)
[»] scaffold0165 (2 HSPs)
scaffold0165 (1-212)||(18647-18857)
scaffold0165 (144-212)||(362-430)
[»] scaffold0097 (1 HSPs)
scaffold0097 (139-212)||(28670-28743)
[»] scaffold0091 (2 HSPs)
scaffold0091 (111-208)||(22022-22119)
scaffold0091 (111-208)||(26219-26316)
[»] scaffold0050 (1 HSPs)
scaffold0050 (111-212)||(13636-13737)
[»] scaffold0007 (1 HSPs)
scaffold0007 (111-212)||(206980-207081)
[»] scaffold0001 (4 HSPs)
scaffold0001 (111-212)||(96675-96776)
scaffold0001 (148-212)||(448954-449018)
scaffold0001 (148-212)||(179781-179845)
scaffold0001 (148-212)||(511889-511953)
[»] scaffold0924 (1 HSPs)
scaffold0924 (148-212)||(3068-3132)
[»] scaffold0190 (1 HSPs)
scaffold0190 (148-212)||(19425-19489)
[»] scaffold0103 (2 HSPs)
scaffold0103 (148-212)||(20397-20461)
scaffold0103 (148-212)||(23123-23187)
[»] scaffold0015 (1 HSPs)
scaffold0015 (148-212)||(171097-171161)
[»] scaffold0002 (1 HSPs)
scaffold0002 (148-212)||(371204-371268)
[»] scaffold0010 (2 HSPs)
scaffold0010 (149-212)||(48469-48532)
scaffold0010 (149-212)||(43403-43466)
[»] scaffold0947 (1 HSPs)
scaffold0947 (148-206)||(3497-3555)
[»] scaffold0297 (2 HSPs)
scaffold0297 (1-63)||(911-973)
scaffold0297 (144-200)||(1053-1109)
[»] scaffold0555 (1 HSPs)
scaffold0555 (111-200)||(2215-2304)
[»] scaffold0167 (1 HSPs)
scaffold0167 (111-212)||(7746-7847)
[»] scaffold0114 (2 HSPs)
scaffold0114 (139-212)||(47137-47210)
scaffold0114 (148-212)||(42748-42812)
[»] scaffold0106 (4 HSPs)
scaffold0106 (2-63)||(39463-39524)
scaffold0106 (1-30)||(37103-37132)
scaffold0106 (148-212)||(46045-46109)
scaffold0106 (148-212)||(50318-50382)
[»] scaffold0076 (2 HSPs)
scaffold0076 (2-63)||(29199-29260)
scaffold0076 (2-63)||(34600-34661)
[»] scaffold0074 (1 HSPs)
scaffold0074 (148-205)||(21005-21062)
[»] scaffold0063 (2 HSPs)
scaffold0063 (151-212)||(14843-14904)
scaffold0063 (147-212)||(25044-25109)
[»] scaffold0664 (1 HSPs)
scaffold0664 (140-212)||(2957-3029)
[»] scaffold0518 (1 HSPs)
scaffold0518 (148-212)||(8301-8365)
[»] scaffold0348 (1 HSPs)
scaffold0348 (140-212)||(1282-1354)
[»] scaffold0331 (1 HSPs)
scaffold0331 (148-212)||(19325-19389)
[»] scaffold0243 (1 HSPs)
scaffold0243 (140-212)||(11611-11683)
[»] scaffold0239 (1 HSPs)
scaffold0239 (148-212)||(13775-13839)
[»] scaffold0173 (1 HSPs)
scaffold0173 (148-212)||(2120-2184)
[»] scaffold0126 (1 HSPs)
scaffold0126 (140-212)||(45019-45091)
[»] scaffold0078 (1 HSPs)
scaffold0078 (148-212)||(16722-16786)
[»] scaffold0022 (2 HSPs)
scaffold0022 (148-212)||(37954-38018)
scaffold0022 (148-212)||(136014-136078)
[»] scaffold0402 (1 HSPs)
scaffold0402 (111-206)||(15759-15854)
[»] scaffold1584 (1 HSPs)
scaffold1584 (139-212)||(1148-1221)
[»] scaffold0546 (1 HSPs)
scaffold0546 (2-63)||(9846-9907)
[»] scaffold0371 (1 HSPs)
scaffold0371 (1-54)||(6140-6193)
[»] scaffold0222 (1 HSPs)
scaffold0222 (2-70)||(4179-4248)
[»] scaffold0109 (1 HSPs)
scaffold0109 (2-63)||(3400-3461)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-30)||(1208-1237)
[»] scaffold1336 (1 HSPs)
scaffold1336 (144-212)||(37-105)
[»] scaffold0562 (1 HSPs)
scaffold0562 (1-37)||(2867-2903)
[»] scaffold0430 (1 HSPs)
scaffold0430 (144-212)||(13847-13914)
[»] scaffold0158 (1 HSPs)
scaffold0158 (148-212)||(15224-15288)
[»] scaffold0149 (1 HSPs)
scaffold0149 (148-212)||(14245-14309)
[»] scaffold0118 (1 HSPs)
scaffold0118 (148-212)||(7955-8019)
[»] scaffold0101 (1 HSPs)
scaffold0101 (148-212)||(6059-6123)
[»] scaffold0071 (1 HSPs)
scaffold0071 (148-212)||(50248-50312)
[»] scaffold0004 (2 HSPs)
scaffold0004 (148-212)||(321892-321956)
scaffold0004 (148-212)||(327580-327644)


Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-100; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 24283589 - 24283800
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  24283589 ttaaggtaagggtgaggtttactttcaataatgtaaaatgaaattctaattttggtttaacatagttctgaatgaaaattggaaatttgggttaggtttt 24283688  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24283689 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctgattgcatacagcatttcattacacatctgtaaact 24283788  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  24283789 gatttggggagt 24283800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 42110224 - 42110013
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||| ||||||||| |||||| || |||||| |||||| |||||||||||||||  | ||| ||||||||||| ||||| || |    
T  42110224 ttaaggtaagggtgaggtttgctttcaatagtgtagattgtaattctgattttgttttaacatagttctggttaaaatttgggaatttgggttagattat 42110125  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | |||||||||||||||||| |  ||| ||||||||| ||||||||||||||||| || |||||||||||||||| ||| | ||||||| ||||||||||    
T  42110124 gattctttgatttttgggtgaaaagagtgtagaaaccattgttttagtgttagaattatgttctggttgcatacagcatgttattacacttctgtaaact 42110025  T
Q  201 aatttggggagt 212  Q
      ||||||||||    
T  42110024 gttttggggagt 42110013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 14288179 - 14288377
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    ||||||||||||||||||||||| |||||| | |||| || |||||| |||||||||||||||  ||||| | |||| ||||||||||| || |||||||    
T  14288179 ttaaggtaagggtgaggtttactctcaatagtatagattgtaattctgattttggtttaacatgtttctggaagaaa-ttgggaatttgggtctaggttt 14288277  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
     | |||||||||||||||||| |||||| |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  14288278 -gattctttgatttttgggtgaattgagtgtaggaatctttgttttagtgttagaaataaattctggttgcatacaacatttcattacacttctgtaaac 14288376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 35985720 - 35985512
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| |||||||||||||||   |  || |||||||||| ||||| || |    
T  35985720 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacatagttctg---gttaaatgggaatttgggttagattat 35985624  T
Q  101 ggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | |||||||| |||||| ||| |  ||| ||||||||| ||||||||||||||| |||  |||| | ||||||||||||||| |||||   |||||||||    
T  35985623 gattctttga-ttttggatggaaaagagtgtagaaaccattgttttagtgttaggaatgtgttcagattgcatacaacattttattacttttctgtaaac 35985525  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  35985524 tgttttggggagt 35985512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 42 - 212
Target Start/End: Complemental strand, 14570793 - 14570624
Alignment:
Q  42 aattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttgg-ttctttgatttttgggtggattgagggtagaaaccttt 140  Q
    |||||| ||||||||||||||   ||||| |||||||||||||||||| |||||| ||||  ||||| | ||||  |||| |||| | ||||| |   ||    
T  14570793 aattctgattttggtttaacaggtttctggatgaaaattgggaatttgggttaggctttgaattcttagttttt--ggtgaattgggtgtagatattgtt 14570696  T
Q  141 gttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||||||||||||||||    
T  14570695 gttttggtgttagaaataggttctgattgcatacaacattttaatacatatctgtaaactaatttggggagt 14570624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 13054940 - 13054720
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgtt-aggtttt 100  Q
    ||||||||||||||||||||||||||||| | ||||    |||||| |||||||||||||||  | |||   |||||||||||||||| ||| |  || |    
T  13054940 taaggtaagggtgaggtttactttcaatagtctagatcataattctgattttggtttaacatgttcctggtagaaaattgggaatttgggtttaaattgt 13054841  T
Q  101 ggttctttgattttt----------gggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacaca 190  Q
    | |||||||||||||          || ||||  ||| ||||||||| ||||||||||||||||| |   ||| ||||||||||||||||| |||||||     
T  13054840 gattctttgatttttatttttttttggatggaaagagtgtagaaaccattgttttagtgttagaa-tgtattcaggttgcatacaacattttattacact 13054742  T
Q  191 tctgtaaactaatttggggagt 212  Q
    ||||||||||  ||||||||||    
T  13054741 tctgtaaactgttttggggagt 13054720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 12960676 - 12960749
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||||||||||||||||||||||||||||||||||  || || ||||||||||| |||||||||||    
T  12960676 ttgttttgatgttagaaataggttctggttgcatacaacatttagtttcatatctgtaaactgatttggggagt 12960749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 13036232 - 13036333
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| || |  || |||  |||||||||||||||||| ||||||||| ||||||||| || ||||||||||| |||||||||    
T  13036232 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgattgcatacaccatttcatttcatatctgtaaactgatttgggga 13036331  T
Q  211 gt 212  Q
    ||    
T  13036332 gt 13036333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 15954238 - 15954311
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||||||||||||||||||||||||||||||||||  ||  ||||||||||||| | |||||||||    
T  15954238 ttgttttgatgttagaaataggttctggttgcatacaacatttagttttacatctgtaaactgacttggggagt 15954311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 54091046 - 54091111
Alignment:
Q  147 gtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| ||||||||||||||||| |||| |||||||   |||||||||||||||||||||||    
T  54091046 gtgttagaattaggttctggttgcatagaacacttcattatgtatctgtaaactaatttggggagt 54091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 12361816 - 12361880
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||||||||||||||||| ||||||||||||    
T  12361816 tgttagaaataggttctgagtgcatacaacaagttattacacatctgtaaaccaatttggggagt 12361880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 32387330 - 32387394
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  32387330 tgttagaattaggttctggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 32387394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12270482 - 12270544
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  12270482 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 12270544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14647032 - 14647094
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  14647032 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 14647094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 4678057 - 4677996
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  4678057 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 4677996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 12537007 - 12537080
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| || |||||||| |||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  12537007 ttgttctaatgttagaattaggttctggttgcatacaacacttagttttgcatctgtaaactaatttggggagt 12537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 18718424 - 18718497
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||| |||| ||  |||||||||| ||||||| || |||||||||||||||||||||||    
T  18718424 ttgttttgatgttagaaatgggttatgagtgcatacaacctttcatttcatatctgtaaactaatttggggagt 18718497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 41176370 - 41176309
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  41176370 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 41176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 41181508 - 41181447
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  41181508 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 41181447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 44776096 - 44776035
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  44776096 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 44776035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 44781280 - 44781219
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  44781280 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 44781219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 11644102 - 11644166
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||||||||| ||||||    
T  11644102 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaactaatttagggagt 11644166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 12275147 - 12275083
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| |||||  |   ||||||||||||| |||||||||||    
T  12275147 tgttagaaataggttctggttgcatacagcatttagtattacatctgtaaactgatttggggagt 12275083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 12355317 - 12355381
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||| ||  | ||||||||||||||||| ||||||||||||    
T  12355317 tgttagaaataggttctgagtgcatacagcaagttattacacatctgtaaaccaatttggggagt 12355381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 20376554 - 20376618
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| |||||||   |||||||||||||||||||||||    
T  20376554 tgttagaattgggttctggttgcatagaacacttcattatttatctgtaaactaatttggggagt 20376618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 30596171 - 30596235
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||| | |||| |||||| |  |||||||||||||||||||||||    
T  30596171 tgttagaattaggttctggttgcacagaacacttcattgcttatctgtaaactaatttggggagt 30596235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 53871958 - 53872022
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || ||||   |||||||||||||||||||||||    
T  53871958 tgttagaattaggttctggttgcataaaacacttaattatgtatctgtaaactaatttggggagt 53872022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 13910427 - 13910364
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  13910427 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 13910364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 13940883 - 13940820
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  13940883 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 13940820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 13947372 - 13947309
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  13947372 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 13947309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19444712 - 19444649
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacat 63  Q
    ||||||||||||||| |||||||||||||| | |||| || |||||||||||||| ||||||||    
T  19444712 ttaaggtaagggtgatgtttactttcaatagtatagattgtaattctaattttggatttaacat 19444649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19451278 - 19451215
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacat 63  Q
    ||||||||||||||| |||||||||||||| | |||| || |||||||||||||| ||||||||    
T  19451278 ttaaggtaagggtgaagtttactttcaatagtatagattgtaattctaattttggatttaacat 19451215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 8579245 - 8579306
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  8579245 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 8579306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 8742194 - 8742255
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || ||||||||| |||||||||||||    
T  8742194 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaagtaatttggggagt 8742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 8760364 - 8760425
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || ||||||||| |||||||||||||    
T  8760364 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaagtaatttggggagt 8760425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 12256469 - 12256396
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||| |||||| |||||||  |||||||||| ||| ||| || |||||||||||||||||||||||    
T  12256469 ttgttttgatgtcagaaatgggttctgagtgcatacaaccttttatttcatatctgtaaactaatttggggagt 12256396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 14085654 - 14085593
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  14085654 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 14085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 14091055 - 14090994
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  14091055 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 14090994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 15519392 - 15519291
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||   ||||| |  ||||||||||||||| ||  |||||||||||  | ||| ||||||||||||| ||||||||||    
T  15519392 tttttgggtgaattgagtgtaggaattgttgttctgatgttagaaataggttatgagtgcatacaacaagttatttcacatctgtaaaccaatttgggga 15519293  T
Q  211 gt 212  Q
    ||    
T  15519292 gt 15519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 16829253 - 16829318
Alignment:
Q  147 gtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| ||| |||| ||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  16829253 gtgttaggaatgggttatgggtgcatataacttttcattgcatatctgtaaactaatttggggagt 16829318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 16837775 - 16837840
Alignment:
Q  147 gtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| ||| |||| ||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  16837775 gtgttaggaatgggttatgggtgcatataacttttcattgcatatctgtaaactaatttggggagt 16837840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 49400654 - 49400593
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  49400654 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 49400593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 11964223 - 11964287
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||| ||  | ||||||||||||||||| || |||||||||    
T  11964223 tgttagaaataggttctgagtgcatacagcaagttattacacatctgtaaaccaaattggggagt 11964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 12364272 - 12364200
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| | ||||||||| |||||||  ||  ||||||| |||||| || |||||||||||||||||||||||    
T  12364272 tgttttggggttagaaatgggttctgagtgtgtacaacaattcatttcatatctgtaaactaatttggggagt 12364200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 12478991 - 12479055
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| ||  |||||||| ||  | ||||||||||||||||| ||||||||||||    
T  12478991 tgttagaaataggttttgagtgcatacagcaagttattacacatctgtaaaccaatttggggagt 12479055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 13692820 - 13692756
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||| ||||||||||||| ||  |||  |||| |||||||||||||||||||    
T  13692820 tgttagaattaggttctagttgcatacaacacttagttatgcatcagtaaactaatttggggagt 13692756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 15934242 - 15934306
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| |||||||||||| |||||  ||  ||||||||||||| | |||||||||    
T  15934242 tgttagaaataggttatggttgcatacagcatttagttttacatctgtaaactgacttggggagt 15934306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16823095 - 16823159
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| ||   ||||||||||||| |||| ||||||||||||| ||||| |||||    
T  16823095 tgttagaaataggttatgagggcatacaacatttaattatacatctgtaaactgatttgaggagt 16823159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 19343579 - 19343643
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| ||| || |  ||||||||| |||||||||||||    
T  19343579 tgttagaattaggttctggttgcatagaacacttctttgcttatctgtaaattaatttggggagt 19343643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 51854278 - 51854362
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga-atgaaattctaattttg-gtttaacatagttctgtatgaaaattgggaa 85  Q
    |||||||||||||||||||||| ||||||| ||||||  | ||||||| |||||| |||||||| |||||||  |||||||||||||    
T  51854278 ttaaggtaagggtgaggtttac-ttcaatagtgtagattttaaattctgattttgtgtttaacagagttctg-gtgaaaattgggaa 51854362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 53570407 - 53570491
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga-atgaaattctaattttg-gtttaacatagttctgtatgaaaattgggaa 85  Q
    |||||||||||||||||||||| ||||||| ||||||  | ||||||| |||||| |||||||| |||||||  |||||||||||||    
T  53570407 ttaaggtaagggtgaggtttac-ttcaatagtgtagattttaaattctgattttgtgtttaacagagttctg-gtgaaaattgggaa 53570491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54832385 - 54832469
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga-atgaaattctaattttg-gtttaacatagttctgtatgaaaattgggaa 85  Q
    |||||||||||||||||||||| ||||||| ||||||  | ||||||| |||||| |||||||| |||||||  |||||||||||||    
T  54832385 ttaaggtaagggtgaggtttac-ttcaatagtgtagattttaaattctgattttgtgtttaacagagttctg-gtgaaaattgggaa 54832469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 10988813 - 10988870
Alignment:
Q  3 aaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaa 60  Q
    |||||||||||||||||||||||||||| | |||| |  |||||| |||||| |||||    
T  10988813 aaggtaagggtgaggtttactttcaatagtatagattataattctgattttgatttaa 10988870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 24122258 - 24122319
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||| | |||||| ||||||||    
T  24122258 taaggtaagggtgagatttactttcaatagtatagattgtaattttgattttgatttaacat 24122319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 29551762 - 29551713
Alignment:
Q  159 ggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    ||||||||||||||| |||| |||||||   |||||||||||||||||||    
T  29551762 ggttctggttgcatagaacacttcattatttatctgtaaactaatttggg 29551713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 10596966 - 10597030
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||| ||  |||||| ||| ||||||| || |||||||||| ||||||||||||    
T  10596966 tgttagaaatgggttttgagtgcatataacctttcatttcatatctgtaaacaaatttggggagt 10597030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10768595 - 10768531
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  10768595 tgttagaattgggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 10768531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 12203175 - 12203111
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||| | ||||||||||| ||  ||   ||||||||||||||||||||||||    
T  12203175 tgttagaattaggttctagatgcatacaacacttagttttgcatctgtaaactaatttggggagt 12203111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14652026 - 14652090
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| | |||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  14652026 tgttagaaatggattctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 14652090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 18127855 - 18127919
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||   ||||||||||  | ||| ||||||||||||  ||||||||||||    
T  18127855 tgttagaaataggttctgagcgcatacaacaagttatttcacatctgtaaatcaatttggggagt 18127919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 18135625 - 18135689
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||   ||||||| ||  | ||| ||||||||||||| ||||||||||||    
T  18135625 tgttagaaataggttctgagcgcatacaccaagttatttcacatctgtaaaccaatttggggagt 18135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 45612493 - 45612429
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  45612493 tgttagaattgggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 45612429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 46070422 - 46070482
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    |||||||| |||||||||| || ||| |||| |||||| |  |||||||||||||||||||    
T  46070422 tgttagaattaggttctggatgtatagaacacttcattgcctatctgtaaactaatttggg 46070482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 49164004 - 49163940
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| ||  |||||||| ||  | | | ||||||||||||||||||||||||||    
T  49164004 tgttagaaataggttatgagtgcatacagcaagttaattcacatctgtaaactaatttggggagt 49163940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 5e-95; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 21900998 - 21901208
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  21900998 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattttgattttgatttaacatagttctggatgaaaattggaaatttgggttaggtttt 21901097  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21901098 ggttctttgatttttgggtggattgagggtagaaacc-ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 21901196  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  21901197 gatttggggagt 21901208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 18819917 - 18819708
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||| | ||||||  |||||| || |||||| | |||||||||||||  |||||  |  |||||||||| ||| ||||| ||||    
T  18819917 ttaaggtaagggtgaggtttgc-ttcaatggtgtagattgtaattctgaatttggtttaacatgtttctg-gtagaaattgggaaattgggttagatttt 18819820  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | ||| ||| |||||||||| |||||| |||| || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18819819 gattcattggtttttgggtgaattgagtgtaggaatcactgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctataaact 18819720  T
Q  201 aatttggggagt 212  Q
    ||||||| ||||    
T  18819719 aatttggtgagt 18819708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 212
Target Start/End: Complemental strand, 25014554 - 25014384
Alignment:
Q  42 aattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttggttctttgatttttgggtggattgagggtagaaacctttg 141  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||| ||||||| |  ||    
T  25014554 aattctgattttggtttaacattgttctgtatgaaaattgggaatttgggttaggttttggttctttggtttttgggtgaatagagtgtagaaatcactg 25014455  T
Q  142 ttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
     |||  |||||||||||||||||| ||||||||| |||||  ||| ||||||||||||| |||||| ||||    
T  25014454 gtttgatgttagaaataggttctgattgcatacatcatttagttatacatctgtaaactgatttggcgagt 25014384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 10036155 - 10035945
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||| ||||||||||||||   || ||   |||| |  ||| |||| |||||||||     
T  10036155 ttaaggtaagggtgaggtttactttcagtaatgtagattgtaattctgattttggtttaacaggtttatggtagaaattgaggattttgagttaggttt- 10036057  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | ||||||| ||||||||||  ||||| |||| || |  ||||||  ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  10036056 gattctttggtttttgggtgatttgagtgtaggaatcactgttttgatgttataaataggttctggttgcatacagcatttcattacacatctgtaaact 10035957  T
Q  201 aatttggggagt 212  Q
    ||||||||||||    
T  10035956 aatttggggagt 10035945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21495904 - 21495694
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||||||||||    || ||   |||| ||||||||||| || |||||||    
T  21495904 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttggtttaaccggtttatggtagaaa-ttgggaatttgggtctaggttt 21495806  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
     | |||||||||||||||||| |||||| |||| || | ||||||||||||||| | |  || | | ||||||||||||||| ||||||| |||||||||    
T  21495805 -gattctttgatttttgggtgaattgagtgtaggaatcattgttttagtgttaggattgtgtgcagattgcatacaacattttattacacttctgtaaac 21495707  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  21495706 tgttttggggagt 21495694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 21889484 - 21889383
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| || |  || |||  |||||||||||||||||| ||||||||| ||||||||| || ||||||||||| |||||||||    
T  21889484 tttttgggtgaattgagtgtaggaatcactggttttatgttagaaataggttctgattgcatacagcatttcatttcatatctgtaaactgatttgggga 21889385  T
Q  211 gt 212  Q
    ||    
T  21889384 gt 21889383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 16774350 - 16774422
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| ||||||||| ||||||||||||||||| |||| |||||||   |||||||||||||||||||||||    
T  16774350 tgttttggtgttagaattaggttctggttgcatagaacacttcattatgtatctgtaaactaatttggggagt 16774422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 23443517 - 23443581
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| |||||  || || |||||||||||||||||||||||    
T  23443517 tgttagaaataggttctggttgcatacagcatttagtttcatatctgtaaactaatttggggagt 23443581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 15193247 - 15193348
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||||||  |||||||| ||||||||| || ||||||||||| |||||||||    
T  15193247 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgagtgcatacagcatttcatttcatatctgtaaactgatttgggga 15193346  T
Q  211 gt 212  Q
    ||    
T  15193347 gt 15193348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43242510 - 43242572
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  43242510 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 43242572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 22757818 - 22757879
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  22757818 taaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 22757879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 5337658 - 5337718
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    |||||||| ||||||||||||||||| |||| |||||| |  |||||||||||||||||||    
T  5337658 tgttagaattaggttctggttgcataaaacacttcattgcttatctgtaaactaatttggg 5337718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 28259229 - 28259293
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| |||||||   |||||||||||||||||||||||    
T  28259229 tgttagaattgggttctggttgcatagaacacttcattatttatctgtaaactaatttggggagt 28259293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 9776370 - 9776307
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  9776370 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 9776307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 17264073 - 17264136
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  17264073 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 17264136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 17270555 - 17270618
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  17270555 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 17270618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 21677550 - 21677609
Alignment:
Q  153 gaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  21677550 gaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 21677609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 22175904 - 22175841
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  22175904 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 22175841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 1856482 - 1856543
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  1856482 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 1856543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 21674452 - 21674513
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  21674452 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 21674513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 757581 - 757645
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| |||||||||||||| |||| ||||||    
T  757581 tgttagaaatgggttctgagtgcatataacctttcattgcacatctgtaaactgatttagggagt 757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 6403783 - 6403847
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||| ||  | ||| ||||||||||||| ||||||||||||    
T  6403783 tgttagaaataggttctgagtgcatacatcaagttatttcacatctgtaaaccaatttggggagt 6403847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 20843928 - 20843864
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   |||||||||| |||||||||||||    
T  20843928 tgttagaattaggttctggttgcatacaacacttagttttgcatctgtaaattaatttggggagt 20843864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 20938492 - 20938428
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  20938492 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 20938428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 22499855 - 22499919
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  22499855 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 22499919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 24594069 - 24594205
Alignment:
Q  4 aggtaagggtgaggtttactttcaataatgtaga--atga-aattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||| ||| ||||| ||||||  || | |||||||||||||||||||| ||||||||| | |||||| |||| ||| |||  | |||    
T  24594069 aggtaagggtgaggtttgctt-caatagtgtagattattataattctaattttggtttaacgtagttctgt-taaaaatttggaaattgggtttaggttt 24594166  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctt 139  Q
    | ||||| ||||||||| ||||  ||| || ||||||||    
T  24594167 gattcttagatttttggatggaaagagtgtggaaacctt 24594205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 37539261 - 37539324
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| ||||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  37539261 gttagaattaggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 37539324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 37546805 - 37546868
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| ||||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  37546805 gttagaattaggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 37546868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 26754519 - 26754490
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaata 30  Q
    ||||||||||||||||||||||||||||||    
T  26754519 ttaaggtaagggtgaggtttactttcaata 26754490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 428082 - 428018
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| ||  ||   |||||||||||||||||| |||||    
T  428082 tgttagaattaggttctggttgcatataacacttagttttgcatctgtaaactaatttgcggagt 428018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 5581593 - 5581657
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  5581593 tgttagaattgggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 5581657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 15462275 - 15462211
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  15462275 tgttagaattgggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 15462211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19363429 - 19363365
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||| | |||||| ||  ||   ||||||||||||||||||||||||    
T  19363429 tgttagaattaggttctggttgtagacaacacttagttttgcatctgtaaactaatttggggagt 19363365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 19801201 - 19801265
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  || ||||| ||  | | | ||||||||||||||||||||||||||    
T  19801201 tgttagaaataggttctgagtgtatacagcaagttaattcacatctgtaaactaatttggggagt 19801265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 21830399 - 21830335
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||||||||||||||| ||  ||   |||||||||||| |||||||||||    
T  21830399 tgttagagttaggttctggttgcatacaacacttagtttagcatctgtaaactgatttggggagt 21830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 22312111 - 22312175
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||| ||||||    
T  22312111 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttcgggagt 22312175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 164; Significance: 8e-88; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 45875 - 46085
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  45875 ttaaggtaagggtaaggtttactttcaataatgtaaaatgaaattctgattttggtttaacattgttctgtatgaaaattgggaatttgggttaggtttt 45974  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  45975 ggttctttgatttttgggtggattgagggtagaaacc-ttgttttgatgttagaaataggttctggttgcatacaacacttaattacacatctgtaaact 46073  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  46074 gatttggggagt 46085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 72046 - 72256
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  72046 ttaaggtaagggtgaggtttactttcaataatgtaaaatgaaattatgattctggtttaacattgttctgtataaaaattgggaatttgggttaggtttt 72145  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  72146 ggttctttgatttttgggtggattgagggtagaaacc-ttgttttgatgttagaaataggttctggttgcatacaacacttaattacacatctgtaaact 72244  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  72245 gatttggggagt 72256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 8e-88; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 23106231 - 23106021
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  23106231 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctgattttggtttaacgttgttctgtatgaaaattgggaatttgggttaggtttt 23106132  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| | || |||||||||||    
T  23106131 ggttctttgatttttgggtggattgagggtagaaacc-ttgttttagtgttagaattaggttttggttgcatacaacatttcaattcatatctgtaaact 23106033  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  23106032 gatttggggagt 23106021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 17414959 - 17414824
Alignment:
Q  76 aaattgggaatttgcgttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcata 173  Q
    |||||||||||| | ||||||||||||  |||||||||||| || || ||||||||||| |||| | |||||  ||||||||||||||||||  ||||||    
T  17414959 aaattgggaatt-gagttaggttttggatttctttgatttt-ggatgaattgagggtaggaaccct-gttttgatgttagaaataggttctgagtgcata 17414863  T
Q  174 caacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||  |||||||| |||||||||||||| |||||||||||    
T  17414862 cagtatttcatttcacatctgtaaactgatttggggagt 17414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 18787022 - 18786901
Alignment:
Q  91 gttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattaca 188  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||| |||| | ||||| ||||||||||||||||||   ||||||||  |||| ||| ||    
T  18787022 gttaggttttggatttctttgatttt-gggtgaattgagggtaggaaccct-gttttggtgttagaaataggttctaagtgcatacagtattttatttca 18786925  T
Q  189 catctgtaaactaatttggggagt 212  Q
    |||||||||||| |||||||||||    
T  18786924 catctgtaaactgatttggggagt 18786901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 14725387 - 14725226
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggtttt 100  Q
    ||||||||||||||||||||||||||||| | | || |  |||||| ||||||||||||| ||||||||  |  |||||| ||||||| || ||||||||    
T  14725387 taaggtaagggtgaggtttactttcaatagtatggattttaattctgattttggtttaacctagttctg-gtagaaattgtgaatttgggtctaggtttt 14725289  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttc 163  Q
    | ||||| || || |||  ||| |||| |||| |||| ||||||||| |||||||||| ||||    
T  14725288 gattcttcgaattatggacggaatgagtgtaggaaccattgttttagggttagaaatatgttc 14725226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 8759447 - 8759508
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||| |||||| ||||||||    
T  8759447 taaggtaagggtgaggtttactttcaatagtatagattgaaattctgattttgatttaacat 8759508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 13127568 - 13127641
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||| ||||||||||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  13127568 ttgttttgatgttagaattaggttctggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 13127641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14132324 - 14132388
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  || |||||||||| |||| || |||||||||||||||||||||||    
T  14132324 tgttagaaataggttctgagtgtatacaacattccatttcatatctgtaaactaatttggggagt 14132388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 22797804 - 22797868
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| |||||  ||  ||||||||||||| |||||||||||    
T  22797804 tgttagaaataggttctggttgcatacagcatttagttttacatctgtaaactgatttggggagt 22797868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 21470749 - 21470670
Alignment:
Q  76 aaattgggaatttgcgttaggttttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaa 155  Q
    |||||||||||||| ||||| ||||| ||||||||||||||| ||||  ||| ||||||| | |||| ||||||||||||    
T  21470749 aaattgggaatttgggttagattttgattctttgatttttggatggaaagagtgtagaaatcattgtattagtgttagaa 21470670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14995240 - 14995286
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattct 47  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  14995240 ttaaggtaagggtgaggtttactttcaatagtgtagattgaaattct 14995286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 21477249 - 21477171
Alignment:
Q  76 aaattgggaatttgcgttaggttttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttaga 154  Q
    |||||||||||||| ||||| ||||| ||||||||||||||| ||||  ||| ||||||| | |||| |||||||||||    
T  21477249 aaattgggaatttgggttagattttgattctttgatttttggatggaaagagtgtagaaatcattgtattagtgttaga 21477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 10470020 - 10470093
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||| | ||||||||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  10470020 ttgttttgatgttagaattgggttctggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 10470093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 13200868 - 13200807
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  13200868 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 13200807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 14034037 - 14033976
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  14034037 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 14033976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 14593632 - 14593693
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  14593632 taaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 14593693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 18315266 - 18315323
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    ||||||||||||||| |||||||||||||||  ||| ||||||||||||| |||||||    
T  18315266 tagaaataggttctgattgcatacaacatttagttatacatctgtaaactgatttggg 18315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 8068988 - 8069052
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || ||||   |||||||||||||||||||||||    
T  8068988 tgttagaattaggttctggttgcataaaacacttaattatgtatctgtaaactaatttggggagt 8069052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14615568 - 14615632
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || |||   ||||||||||||||||||||||||    
T  14615568 tgttagaattaggttctggttgcatataacacttaatttagcatctgtaaactaatttggggagt 14615632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 8767208 - 8767259
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaatttt 53  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||| |||||    
T  8767208 taaggtaagggtgaggtttactttcaatagtatagattgaaattctgatttt 8767259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 13941285 - 13941222
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| ||||||||||||||||| |||| || ||| |  |||||||||||||||||||||||    
T  13941285 gttagaattaggttctggttgcatagaacactttattgcttatctgtaaactaatttggggagt 13941222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 27561817 - 27561880
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  27561817 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 27561880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 28289484 - 28289547
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||| | |||| ||| ||||||| || |||||||||||||||||||||||    
T  28289484 gttagaaatgggttctgggtacataaaacctttcatttcatatctgtaaactaatttggggagt 28289547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 33681533 - 33681596
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| | |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  33681533 gttagaagtgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 33681596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7430646 - 7430584
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || ||| || |||||| ||||||||    
T  7430646 ttaaggtaagggtgaggtttactttcaatagtatagattgtaatcctgattttgatttaacat 7430584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 19587860 - 19587902
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacattt 181  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  19587860 ttgttttgatgttagaaataggttctggttgcatacaacattt 19587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 27768211 - 27768153
Alignment:
Q  150 ttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    |||||| ||||||||||||||||| |||| |||||||   |||||||||||||||||||    
T  27768211 ttagaattaggttctggttgcatagaacacttcattatgtatctgtaaactaatttggg 27768153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 14374647 - 14374720
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||| ||||||||||||||||||||||| |||||  || || |||| |||||| |||||||||||    
T  14374647 ttgttttgatgttggaaataggttctggttgcatacagcatttagtttcatatctttaaactgatttggggagt 14374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 19468717 - 19468652
Alignment:
Q  147 gtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||  |||||||| ||  | ||| ||||||||||||| ||||||||||||    
T  19468717 gtgttagaaataggttctgagtgcatacagcaagttatttcacatctgtaaaccaatttggggagt 19468652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 23835950 - 23835889
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||| ||||||||||||||    
T  23835950 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaagctaatttggggagt 23835889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 25773527 - 25773466
Alignment:
Q  76 aaattgggaatttgcgttaggttttggttctttgatttttgggtggattgagggtagaaacc 137  Q
    |||||||||||||| ||||| ||||| ||||||||||||||| ||||  ||| |||||||||    
T  25773527 aaattgggaatttgggttagattttgattctttgatttttggttggaaagagtgtagaaacc 25773466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 28359136 - 28359197
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || ||||||||||||| |||||||||    
T  28359136 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaaattggggagt 28359197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 1593627 - 1593563
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  1593627 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 1593563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19727504 - 19727440
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  19727504 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 19727440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 21724036 - 21724100
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  21724036 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 21724100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 22888870 - 22888946
Alignment:
Q  79 ttgggaatttgcgttaggttttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaa 155  Q
    ||||||||| |  |||| ||||| ||||||||||||||| |||| |||| |||||||||  ||| ||||||||||||    
T  22888870 ttgggaattgggtttagattttgattctttgatttttggatggaatgagtgtagaaaccactgtattagtgttagaa 22888946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 23232699 - 23232763
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   |||||||||||| |||||||||||    
T  23232699 tgttagaattaggttctggttgcatacaacacttagtttatcatctgtaaactgatttggggagt 23232763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 24721491 - 24721427
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| || |||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  24721491 tgttataattaggttctggttgcatacaacacttagttttgcatctgtaaactaatttggggagt 24721427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29266396 - 29266344
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg 54  Q
    ||||||||||||||||||||||| |||||| | |||| || |||||||||||||    
T  29266396 ttaaggtaagggtgaggtttactctcaatagtatagattg-aattctaattttg 29266344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 2709249 - 2709185
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   ||| |||||||| |||||||||||    
T  2709249 tgttagaattaggttctggttgcatacaacacttagtttagcatatgtaaactgatttggggagt 2709185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19819767 - 19819703
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||| | ||  | ||||||||||||||||| || |||||||||    
T  19819767 tgttagaaataggttctgagtgcatatagcaagttattacacatctgtaaaccaaattggggagt 19819703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22347536 - 22347485
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaatttt 53  Q
    ||||||||||||||||||||||| |||||| | |||| || ||||||||||||    
T  22347536 ttaaggtaagggtgaggtttactctcaatagtatagattg-aattctaatttt 22347485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 22744742 - 22744532
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  22744742 ttaaggtaagggtgatgtttactttcaataatgtagaatgaaattttgattttggtttaacatagttctgtatgaaaattggaaaattgggttaggtttt 22744643  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22744642 ggttctttggtttttgggtggattgagggtagaaacc-ttgttttgatgttagaaataggttctggttgcatacaacatttaattacacatctgtaaact 22744544  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  22744543 gatttggggagt 22744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 20007274 - 20007064
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga-atgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||||| ||| || || | |||| ||  |||||||||||||||||||||   ||||| |||||||||||||||||| |||||||||    
T  20007274 ttaaggtaagggtgaggtttgctt-cagtagtatagatattgaattctaattttggtttaacaggtttctggatgaaaattgggaatttgggttaggttt 20007176  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    ||  |  ||| ||||||| || |||||| ||||| |    | |||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  20007175 tgaattcttggtttttgg-tgaattgagtgtagatattgctattttggtgttagaaataggttctggttgcatacaacatttaaatacatatctgtaaac 20007077  T
Q  200 taatttggggagt 212  Q
    |||||||||||||    
T  20007076 taatttggggagt 20007064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14593887 - 14594099
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaatt-ttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||| |||    ||    
T  14593887 ttaaggtaagggtgaagtttactttcaataatgtagaatgaaattctgattcttggtttaacattgttctgtatgaaaattgggaaattgggtttatgtt 14593986  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
     | || |||| |||||| ||| |||||| ||||| |    | ||||  ||||||||||||||||||  |||||||| ||  | ||| |  ||||||||||    
T  14593987 ggattatttggtttttgagtgaattgagtgtagagattgcttttttgatgttagaaataggttctgagtgcatacagcaagttatttcgtatctgtaaac 14594086  T
Q  200 taatttggggagt 212  Q
    | |||||||||||    
T  14594087 tgatttggggagt 14594099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20004848 - 20005059
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatga-aattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||||||||| || || |||||| |   |||||| ||||||||||||||   || ||   |||| | |||| |||| |||  | ||    
T  20004848 ttaaggtaagggtgaggtttactt-cagtagtgtagatttttaattctgattttggtttaacaggtttatggtagaaattggggattttgagtttaggtt 20004946  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || ||||||| |||||||||| |||||| |||| || | ||||||| |||||||||||||||| ||  |||||||| ||||||||| || ||||||||||    
T  20004947 tgattctttggtttttgggtgaattgagtgtaggaatcattgttttggtgttagaaataggttatgagtgcatacagcatttcatttcatatctgtaaac 20005046  T
Q  200 taatttggggagt 212  Q
    | |||||||||||    
T  20005047 tgatttggggagt 20005059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 20773296 - 20773417
Alignment:
Q  91 gttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattaca 188  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||| |||| | |||||  ||||||||||||||||||  ||||||||| |||||||| ||    
T  20773296 gttaggttttggatttctttgatttt-gggtgaattgagggtaggaaccct-gttttgatgttagaaataggttctgagtgcatacaatatttcatttca 20773393  T
Q  189 catctgtaaactaatttggggagt 212  Q
    |||||||||||| |||||||||||    
T  20773394 catctgtaaactgatttggggagt 20773417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 20783090 - 20783211
Alignment:
Q  91 gttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattaca 188  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||| |||| | |||||  ||||||||||||||||||  ||||||||| |||||||| ||    
T  20783090 gttaggttttggatttctttgatttt-gggtgaattgagggtaggaaccct-gttttgatgttagaaataggttctgagtgcatacaatatttcatttca 20783187  T
Q  189 catctgtaaactaatttggggagt 212  Q
    |||||||||||| |||||||||||    
T  20783188 catctgtaaactgatttggggagt 20783211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 33089916 - 33089706
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||||||||||||||| |||||| |  |||||| ||||||| ||||||||  |||||   |||||||||||||||| ||   | ||    
T  33089916 ttaaggtaagggtgaggtttactttcaata-tgtagattataattctgattttggatttaacatgtttctggtagaaaattgggaatttgggtctagatt 33089818  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || ||||||||| || || ||||  ||| ||||||| | |||||||||||||||||||  |||| ||||| | ||| ||| | ||||||| |||||||||    
T  33089817 tgattctttgatgtt-ggatggaaagagtgtagaaatcattgttttagtgttagaaatgtgttcaggttgtagacagcatcttattacacttctgtaaac 33089719  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  33089718 tgttttggggagt 33089706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 21299313 - 21299474
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggtttt 100  Q
    ||||||||||||||||||||||||||||| | | || |  |||||| ||||||||||||| ||||||||  |  |||||||||||||| || ||||||||    
T  21299313 taaggtaagggtgaggtttactttcaatagtatggattataattctgattttggtttaacctagttctg-gtagaaattgggaatttgggtctaggtttt 21299411  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttc 163  Q
    | ||||| || || |||  ||| |||| |||| |||| |||||||||||||||||||| ||||    
T  21299412 gattcttcgaattctggacggaatgagtgtaggaaccattgttttagtgttagaaatatgttc 21299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 25623801 - 25624011
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggtttt 100  Q
    ||||||||||||||||||||||||||||| | |||| || |||||| |||||||||||||||  || ||  | ||||||||||||||| || |||||| |    
T  25623801 taaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttggtttaacatgtttttggttaaaaattgggaatttgggtctaggttat 25623900  T
Q  101 ggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | ||| |||  |||||  ||| |  ||| ||||||||||||| ||| ||||||||| || || | |  ||||||||||||||  ||||||||||||||||    
T  25623901 gattccttg-gttttgaatggaaaagagtgtagaaacctttg-tttggtgttagaattatgtccagactgcatacaacatttagttacacatctgtaaac 25623998  T
Q  200 taatttggggagt 212  Q
    | |||||| ||||    
T  25623999 ttatttggcgagt 25624011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20011253 - 20011464
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgtta-ggttt 99  Q
    ||||||||||||||||||||||| |||||| | |||| |  |||||| ||||||||||||| ||||||||  |  |||||||||||||| |||| |||||    
T  20011253 ttaaggtaagggtgaggtttactctcaatagtatagattataattctgattttggtttaacttagttctg-gtagaaattgggaatttgggttagggttt 20011351  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || ||||||| ||||||| | ||  ||| |||||| || |    |||||||||| |||| |||| ||||| | |||||| |  ||||||  |||||||||    
T  20011352 tgattctttgctttttggattgaaagagtgtagaatccatgacattagtgttaggaatatgttcaggttgtagacaacactctattacatttctgtaaac 20011451  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  20011452 tgttttggggagt 20011464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 21685368 - 21685430
Alignment:
Q  150 ttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||    
T  21685368 ttagaaataggttctggttgcatacaacatttaatttcatatctgtaaactgatttggggagt 21685430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 21689717 - 21689779
Alignment:
Q  150 ttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||    
T  21689717 ttagaaataggttctggttgcatacaacatttaatttcatatctgtaaactgatttggggagt 21689779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 41008754 - 41008818
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||||||||||||||||||  || || ||||||||||| |||||||||||    
T  41008754 tgttagaaataggttctggttgcatacaacatttagtttcatatctgtaaactgatttggggagt 41008818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 11391880 - 11391944
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| |||||||   |||||||||||||||||||||||    
T  11391880 tgttagaattaggttctggttgcatataacacttcattaggtatctgtaaactaatttggggagt 11391944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3698727 - 3698665
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  3698727 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 3698665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 10607914 - 10607759
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg-gtttaacatagttctgtatgaaaattgggaatttgcg--ttaggtt 98  Q
    ||||||||||||||||||||||||||||| | | || |  |||||| |||||| ||||||| ||||||||  |  ||||| |||||||| |   ||||||    
T  10607914 taaggtaagggtgaggtttactttcaatagtatggattataattctgattttgagtttaacctagttctg-gtagaaattcggaatttggggtctaggtt 10607816  T
Q  99 ttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaa 155  Q
    ||| ||||| || || ||| |||| |||| |||| |||| |||||||||||||||||    
T  10607815 ttgattcttcgaattctggatggaatgagtgtaggaaccattgttttagtgttagaa 10607759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 18680809 - 18680870
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  18680809 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 18680870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 9272461 - 9272524
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| |||||||  |||||||||||||||||||||||||    
T  9272461 gttagaaatgggttctgagtgcataaaacctttcattgtacatctgtaaactaatttggggagt 9272524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 19987480 - 19987541
Alignment:
Q  150 ttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||| |||||||||||  |||||||||||||||||| || ||||||||||| |||||||||||    
T  19987480 ttaggaataggttctgagtgcatacaacatttcatt-catatctgtaaactgatttggggagt 19987541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19989961 - 19989908
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg 54  Q
    |||||||||||||||||||||||||||||  | |||| |||| |||||||||||    
T  19989961 ttaaggtaagggtgaggtttactttcaatggtatagattgaatttctaattttg 19989908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 22056613 - 22056552
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  22056613 tagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactaatttggggagt 22056552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 23826263 - 23826202
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  23826263 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 23826202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 31567117 - 31567178
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||| ||||||||||||||    
T  31567117 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaagctaatttggggagt 31567178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 31572338 - 31572399
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||| ||||||||||||||    
T  31572338 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaagctaatttggggagt 31572399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 44432984 - 44432923
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  44432984 taaggtaagggtgagttttactttcaatagtatagattgtaattctgattttgatttaacat 44432923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 12304048 - 12303988
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    |||||||| ||||||||||||||||| |||| || ||||   |||||||||||||||||||    
T  12304048 tgttagaattaggttctggttgcataaaacacttaattatgtatctgtaaactaatttggg 12303988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 20258283 - 20258347
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  ||||||||| |  | ||| ||||||||||||| ||||||||||||    
T  20258283 tgttagaaataggttctgagtgcatacaatacgttatttcacatctgtaaaccaatttggggagt 20258347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 21044913 - 21044977
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  ||||||||| |  | ||| ||||||||||||| ||||||||||||    
T  21044913 tgttagaaataggttctgagtgcatacaatacgttatttcacatctgtaaaccaatttggggagt 21044977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 1803792 - 1803855
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| ||  ||||||||||||||||||||||    
T  1803792 gttagaaatgggttctgagtgcataaaacctttcattgcatttctgtaaactaatttggggagt 1803855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 1264923 - 1264859
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  ||||||||| |  | ||| |  |||||||||||||||||||||||    
T  1264923 tgttagaaataggttctgagtgcatacaataccttattgcttatctgtaaactaatttggggagt 1264859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14745793 - 14745857
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| ||   ||||||   ||||||||||||||||||||||||    
T  14745793 tgttagaattgggttctggttgcatagaaacattcatttttcatctgtaaactaatttggggagt 14745857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16266143 - 16266207
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| ||   ||||||   ||||||||||||||||||||||||    
T  16266143 tgttagaattgggttctggttgcatagaaacattcatttttcatctgtaaactaatttggggagt 16266207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 21682974 - 21683037
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||| ||||| || ||  || || |||||| ||||||||||||||||    
T  21682974 tgttagaaataggttctggttgtatacagcacttagtttcatatctgt-aactaatttggggagt 21683037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 22062884 - 22062928
Alignment:
Q  168 tgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| ||||||| || ||||||||||| |||||||||||    
T  22062884 tgcatacaacctttcattgcatatctgtaaactgatttggggagt 22062928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 36445066 - 36445110
Alignment:
Q  168 tgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||  | ||| ||||||||||||||||||||||||||    
T  36445066 tgcatacaacaagttatttcacatctgtaaactaatttggggagt 36445110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 37240434 - 37240370
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  37240434 tgttagaattgggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 37240370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12695628 - 12695418
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||| ||||||||||    
T  12695628 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctgattttggtttaacgttgttctgtatcaaaattgggaatttgggttaggtttt 12695529  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| | |||||||||||    
T  12695528 ggttctttgatttttggatggattgagggtagaaacc-ttgttttagtgttagaaataggttctggttgcatacaacagttaattaaatatctgtaaact 12695430  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  12695429 gatttggggagt 12695418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 23443220 - 23443030
Alignment:
Q  9 agggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttggttcttt 108  Q
    ||||||||||||| |||||||| | |||| || |||||| |||||||||||||||  |||||   |||  ||||||||||| |||  | |||| ||||||    
T  23443220 agggtgaggtttaatttcaatagtatagattgtaattctgattttggtttaacatgtttctggtagaag-ttgggaatttgagtttaggtttgattcttt 23443122  T
Q  109 gatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||| |||| || | |||||||||||||||||||| ||||||||||||||||  |||||||| ||| ||||||||||    
T  23443121 gatttttgggtggattgagtgtaggaatcattgttttagtgttagaaatatgttctggttgcatacagtatttcattgcacttctgtaaact 23443030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14249670 - 14249881
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    |||||||||||||||||||||||||||||| |||||| |  |||||| ||||||||||||||||||||||  | ||||||||||||||| | |||| ||     
T  14249670 ttaaggtaagggtgaggtttactttcaatagtgtagattataattctgattttggtttaacatagttctg-gttaaaattgggaatttgggtttagatta 14249768  T
Q  100 tggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    || |||||||| |||||| ||| |  ||| || |||||| ||||||||||||||| |||  |||| | ||||||||||||| | ||||||| | ||||||    
T  14249769 tgattctttga-ttttggatggaaaagagtgttgaaaccattgttttagtgttaggaatgtgttcagattgcatacaacatgttattacacttatgtaaa 14249867  T
Q  199 ctaatttggggagt 212  Q
    ||  ||||||||||    
T  14249868 ctgttttggggagt 14249881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14265140 - 14265351
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    |||||||||||||||||||||||||||||| |||||| |  |||||| ||||| ||||||||||||||||  | ||||||||||||||| | |||| ||     
T  14265140 ttaaggtaagggtgaggtttactttcaatagtgtagattataattctgattttagtttaacatagttctg-gttaaaattgggaatttgggtttagatta 14265238  T
Q  100 tggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    || |||||||| |||||| ||| |  ||| || |||||| ||||||||||||||| |||  |||| | ||||||||| ||| | ||||||| ||||||||    
T  14265239 tgattctttga-ttttggatggaaaagagtgttgaaaccattgttttagtgttaggaatgtgttcagattgcatacagcatgttattacacttctgtaaa 14265337  T
Q  199 ctaatttggggagt 212  Q
    ||  ||||||||||    
T  14265338 ctgttttggggagt 14265351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 20752280 - 20752073
Alignment:
Q  5 ggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttggtt 104  Q
    |||||||||||||||| ||||||||| |||| | || |||||| |||||||||| |||||||||||  | ||| || |||||||| ||||| || || ||    
T  20752280 ggtaagggtgaggtttgctttcaatagtgtatattgtaattctgattttggtttgacatagttctggttaaaatttaggaatttgggttagtttatgatt 20752181  T
Q  105 ctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaat 203  Q
    |||||||||| || ||||   ||| ||||||||| |||||||||||||||||||  |||| ||||  | ||||||| ||||||||| ||||| ||||  |    
T  20752180 ctttgatttt-ggatggaaaagagtgtagaaaccattgttttagtgttagaaatgtgttcaggttatagacaacatctcattacacttctgtgaactgtt 20752082  T
Q  204 ttggggagt 212  Q
    |||||||||    
T  20752081 ttggggagt 20752073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 19152881 - 19152674
Alignment:
Q  5 ggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttggtt 104  Q
    |||||||||||||||| ||||||||| |||| | || |||||| |||||||||| |||||||||||  | ||| ||| ||||||| ||||| || || ||    
T  19152881 ggtaagggtgaggtttgctttcaatagtgtatattgtaattctgattttggtttgacatagttctggttaaaatttgagaatttgggttagtttatgatt 19152782  T
Q  105 ctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaat 203  Q
    |||||||||| || ||||   ||| ||||||||| |||||||||||||||||||  |||| ||||  | ||| ||| ||||||||| ||||| ||||  |    
T  19152781 ctttgatttt-ggatggaaaagagtgtagaaaccattgttttagtgttagaaatgtgttcaggttatagacatcatctcattacacttctgtgaactgtt 19152683  T
Q  204 ttggggagt 212  Q
    |||||||||    
T  19152682 ttggggagt 19152674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 19146564 - 19146353
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||| |||||||||  ||||| || |||||| |||||||||| |||||||||||  | ||| ||| ||||||| ||||| || |    
T  19146564 ttaaggtaagggtgaggtttgctttcaatagggtagattgtaattctgattttggtttgacatagttctggttaaaatttgagaatttgggttagtttat 19146465  T
Q  101 ggttctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | |||||||||||| || ||||   ||| |||||  || |||||||||||||||||||  |||| ||||  | ||| ||| ||||||||| ||||| |||    
T  19146464 gattctttgatttt-ggatggaaaagagtgtagaccccattgttttagtgttagaaatgtgttcaggttatagacagcatctcattacacttctgtgaac 19146366  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  19146365 tgctttggggagt 19146353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 20745963 - 20745752
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||| |||||||||  ||||| || |||||| |||||||||| |||||||||||  | ||| ||| ||||||| ||||| || |    
T  20745963 ttaaggtaagggtgaggtttgctttcaatagggtagattgtaattctgattttggtttgacatagttctggttaaaatttgagaatttgggttagtttat 20745864  T
Q  101 ggttctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | |||||||||||| || ||||   ||| |||||  || |||||||||||||||||||  |||| ||||  | ||| ||| ||||||||| ||||| |||    
T  20745863 gattctttgatttt-ggatggaaaagagtgtagaccccattgttttagtgttagaaatgtgttcaggttatagacagcatctcattacacttctgtgaac 20745765  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  20745764 tgctttggggagt 20745752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 15143160 - 15143029
Alignment:
Q  81 gggaatttgcgttaggttttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatt 180  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||   |||| || |  || |||  || ||||||||||||||| ||| ||||||||||    
T  15143160 gggattttgggttaggttttggttctttgatttttgggtgaattggttgtaggaatcactggtttgatgatagaaataggttctgattgaatacaacatt 15143061  T
Q  181 tcattacacatctgtaaactaatttggggagt 212  Q
    |  ||| |||| |||||||| |||||||||||    
T  15143060 tagttatacatttgtaaactgatttggggagt 15143029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 45186366 - 45186265
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||    ||||||  ||||||||||||||||||||||||||||||||||  || || ||||||||||| |||||||||    
T  45186366 tttttgggtgaattgagtgtaggaattactgttttgatgttagaaataggttctggttgcatacaacatttagtttcatatctgtaaactgatttgggga 45186267  T
Q  211 gt 212  Q
    ||    
T  45186266 gt 45186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 13318587 - 13318514
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||||||||||||||||||||||||||||||| ||  ||  |||| ||||||||||||||||||||    
T  13318587 ttgttttgatgttagaaataggttctggttgcatacaacacttagttttacatttgtaaactaatttggggagt 13318514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16073252 - 16073316
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||| |||||  |||||||||||||||||| || ||||||||||| |||||||||||    
T  16073252 tgttagaaatagtttctgagtgcatacaacatttcatttcatatctgtaaactgatttggggagt 16073316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19463532 - 19463468
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  19463532 tgttagaattaggttctggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 19463468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 46681475 - 46681539
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||||||||||||||| || |||  | ||||||||||| |||||||||||    
T  46681475 tgttagaaataggttctggttgcatacaacacttaattttatatctgtaaactgatttggggagt 46681539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27565952 - 27565890
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  27565952 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 27565890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38829184 - 38829122
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  38829184 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 38829122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 806280 - 806341
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  806280 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 11631222 - 11631283
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  11631222 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 11631283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 12462381 - 12462308
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||| |||||||||| || ||| |||| |||||| || |||||||||||||||||||||||    
T  12462381 ttgttttgatgttagaattaggttctggatgtatagaacacttcattgcatatctgtaaactaatttggggagt 12462308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 14580804 - 14580905
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||||||  |||||||| ||| ||||| || ||||||||||| |||||||||    
T  14580804 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgagtgcatacagcatctcatttcatatctgtaaactgatttgggga 14580903  T
Q  211 gt 212  Q
    ||    
T  14580904 gt 14580905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 15103614 - 15103687
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||| ||||||||||||||||||||||||||| ||  ||  | |||||||||||||||||||||||    
T  15103614 ttgttttgatgtgagaaataggttctggttgcatacaacacttagttttatatctgtaaactaatttggggagt 15103687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 15436817 - 15436918
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||    ||||||  |||||||||||||||||||||||||||| |||||  ||  |||| |||||||| |||||||||    
T  15436817 tttttgggtgaattgagtgtaggaattactgttttgatgttagaaataggttctggttgcatacagcatttagttttacatgtgtaaactgatttgggga 15436916  T
Q  211 gt 212  Q
    ||    
T  15436917 gt 15436918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 18048512 - 18048573
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  18048512 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 18048573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 18054991 - 18055052
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  18054991 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 18055052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10520677 - 10520613
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  10520677 tgttagaattaggttctggttgcatacaacacttagttttgcatctgtaaactaatttggggagt 10520613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 11340596 - 11340532
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || |||| | |||||||||||||||||||||||    
T  11340596 tgttagaattagtttctggttgcatagaacacttaattatatatctgtaaactaatttggggagt 11340532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 12555332 - 12555268
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| || ||  ||  |||||||||||||||||||| ||||    
T  12555332 tgttagaaataggttctggttgcatacagcacttagttttacatctgtaaactaatttggagagt 12555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 14129094 - 14129030
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  14129094 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactaatttggggagt 14129030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 14135940 - 14135876
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  14135940 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactaatttggggagt 14135876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 14432912 - 14432848
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  14432912 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactaatttggggagt 14432848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 15097251 - 15097311
Alignment:
Q  152 agaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||||||||||| ||  ||  | |||||||||||||||||||||||    
T  15097251 agaaataggttctggttgcatacaacacttagttttatatctgtaaactaatttggggagt 15097311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 17181994 - 17182058
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  17181994 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactaatttggggagt 17182058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 18436506 - 18436570
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || |||| | |||||||||||||||||||||||    
T  18436506 tgttagaattagtttctggttgcatagaacacttaattatatatctgtaaactaatttggggagt 18436570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 23200777 - 23200840
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  23200777 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 23200840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 23506904 - 23506967
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  23506904 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 23506967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 29796620 - 29796557
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  29796620 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 29796557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 29800439 - 29800376
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  29800439 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 29800376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 14168797 - 14168898
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    ||||||||||  ||||| |||||||    ||||||  ||||||||||||||||||  |||||||||||  | ||| |  |||||||||||||||||||||    
T  14168797 tttttgggtgatttgagtgtagaaattgctgttttgatgttagaaataggttctgagtgcatacaacaagttatttcgtatctgtaaactaatttgggga 14168896  T
Q  211 gt 212  Q
    ||    
T  14168897 gt 14168898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 14173044 - 14173145
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    ||||||||||  ||||| |||||||    ||||||  ||||||||||||||||||  |||||||||||  | ||| |  |||||||||||||||||||||    
T  14173044 tttttgggtgatttgagtgtagaaattgctgttttgatgttagaaataggttctgagtgcatacaacaagttatttcgtatctgtaaactaatttgggga 14173143  T
Q  211 gt 212  Q
    ||    
T  14173144 gt 14173145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 19617418 - 19617357
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  19617418 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 19617357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 20579247 - 20579308
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| |||| || || |||||||||||||||||||||||    
T  20579247 tagaaatgggttctgggtgcataaaacctttcgtttcatatctgtaaactaatttggggagt 20579308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 35962018 - 35962079
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||  ||||||||  | |||||| ||||||||||||| ||||||||||||    
T  35962018 tagaaataggttctgagtgcatacagtaattcatttcacatctgtaaaccaatttggggagt 35962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 12454915 - 12454851
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||| || ||| |||| |||||| |  |||||||||||||||||||||||    
T  12454915 tgttagaattaggttctggatgtatagaacacttcattgcctatctgtaaactaatttggggagt 12454851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14287403 - 14287467
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  14287403 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 14287467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 15722494 - 15722558
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  15722494 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 15722558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16475418 - 16475482
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| |||||||||||  ||||| || ||||||||| || ||||||||||| |||||||||||    
T  16475418 tgttaggaataggttctgagtgcatgcagcatttcatttcatatctgtaaactgatttggggagt 16475482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 16184738 - 16184801
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||  |||||||| ||  | ||| ||||||||||||| ||||||||||||    
T  16184738 gttagaaataggttctgagtgcatacagcaagttatttcacatctgtaaaccaatttggggagt 16184801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 23665103 - 23665166
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||| ||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  23665103 gttagaaatgggttttgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 23665166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41781047 - 41781100
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg 54  Q
    ||||||||||||||| ||||||| |||||||| |||| | ||| ||||||||||    
T  41781047 ttaaggtaagggtgaagtttactctcaataatatagattaaaaatctaattttg 41781100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 3328686 - 3328622
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  || ||||| |||||  || || ||||||||||| |||||||||||    
T  3328686 tgttagaaataggttctgagtgtatacagcatttagttgcatatctgtaaactgatttggggagt 3328622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 11879922 - 11879858
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  11879922 tgttagaattgggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 11879858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 12429714 - 12429650
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||| ||  | ||| ||||| ||||||| ||||||||||||    
T  12429714 tgttagaaataggttctgagtgcatacatcaagttatttcacatttgtaaaccaatttggggagt 12429650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 13963319 - 13963383
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  13963319 tgttagaattagtttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 13963383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14280937 - 14281001
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||| ||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  14280937 tgttagaaatgggttatgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 14281001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 15085244 - 15085308
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| |||||||||||  |||||||||||  | | | ||||||||||||| ||||||||||||    
T  15085244 tgttaggaataggttctgagtgcatacaacaagttaattcacatctgtaaaccaatttggggagt 15085308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19600693 - 19600629
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||| ||||    
T  19600693 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggtgagt 19600629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 46348035 - 46348099
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||  ||  | ||| ||||||||||||| ||||||||||||    
T  46348035 tgttagaaataggttctgagtgcatactgcaagttatttcacatctgtaaaccaatttggggagt 46348099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 13648 - 13439
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||| ||  ||||||||||| |||||| |||||||||||    
T  13648 taaggtaagggtgaggtttactttcaataatgtagaatgaaattcctaatttgatttaacatagtccttgatgaaaattggaaatttgggttaggttttg 13549  T
Q  102 gttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaacta 201  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  13548 gttctttgatttttgggtggattgagggtagaaacc-ttgttttagtgttagaaataggttctggttgcatacagcatttcattacacatctgtaaactt 13450  T
Q  202 atttggggagt 212  Q
    |||||||||||    
T  13449 atttggggagt 13439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 41315270 - 41315061
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  41315270 ttaaggtaagggtgagatttactttcaataatgtagaatgaatttttgattttggtttaacattgttctgtatgaaaattgggaatttgggttaggtttt 41315171  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  41315170 ggttctttgatttttgggtggattgagggtagaaacc-ttgttttgatgttagaaataggttctggttgcatacagcatttcatttcatatctgtaaact 41315072  T
Q  201 aatttggggag 211  Q
     ||||||||||    
T  41315071 gatttggggag 41315061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 21986039 - 21986249
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||||||||||||| |||||| |  |||||| ||||||||||||||||||||||  | ||||||||||||||| ||||| || |    
T  21986039 ttaaggtaagggtgaggtttactttcaatagtgtagattataattctgattttggtttaacatagttctggtt-aaaattgggaatttgggttagattat 21986137  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | || ||||||| ||||||| |||||| ||||||| | |||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||| ||||    
T  21986138 gattatttgattcttgggtgaattgagtgtagaaatcattgttttagtgttagaaatatgttctggttgcgtacagcatttcattgcacatctgtgaact 21986237  T
Q  201 aatttggggagt 212  Q
      ||||||||||    
T  21986238 gttttggggagt 21986249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 21733558 - 21733768
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||| |||||||| | ||||||| |||||| || |||||| |||||||||||||||  || ||   |||| ||||||||||| ||||| ||||    
T  21733558 ttaaggtaaggctgaggtttgccttcaatagtgtagattgtaattctgattttggtttaacatgtttatggtagaaa-ttgggaatttgggttagatttt 21733656  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | |||||||||||||||||| ||| || |||| || | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21733657 gattctttgatttttgggtgaatttagtgtaggaatcattgttttaatgttagaaataggttctggttgcatacaacatttcattgcacatctgtaaact 21733756  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  21733757 gatttggggagt 21733768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 21744738 - 21744949
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||||||||||||||| |||||| || |||||| ||||||| ||||||||  |||||   |||||||||||||||| ||   | ||    
T  21744738 ttaaggtaagggtgaggtttactttcaata-tgtagattgtaattctgattttggatttaacatgtttctggtagaaaattgggaatttgggtctagatt 21744836  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || |||||||||||||||||| |||||| |||| || | |||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  21744837 tgattctttgatttttgggtgaattgagtgtaggaatcattgttttagtgttagaaatatgttctggtcgcatacagcatttcattgcacatctgtaaac 21744936  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  21744937 tgttttggggagt 21744949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 5381666 - 5381456
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||||||||||||  |||||  ||||| ||||||||||| || |||||||    
T  5381666 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttggtttaacatgtttctggttgaaa-ttgggaatttgggtctaggttt 5381568  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
     | |||||||||||||||||| ||| || ||||||| | ||||||||||||||| |||  |||| | |||||||||| |||| ||||||| |||||||||    
T  5381567 -gattctttgatttttgggtgaattaagtgtagaaatcattgttttagtgttaggaatgtgttcagattgcatacaatattttattacacttctgtaaac 5381469  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  5381468 tgttttggggagt 5381456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 21409952 - 21410025
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  21409952 ttgttttgatgttagaattaggttctggttgcatacaacatttcatttcatatctgtaaactgatttggggagt 21410025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 30490686 - 30490795
Alignment:
Q  103 ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaa 202  Q
    ||||||| |||||||||| |||||| |||| || |  || |||  ||||||||||| ||||||  |||||||||||||||||| || ||||||||||| |    
T  30490686 ttctttggtttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataagttctgagtgcatacaacatttcatttcatatctgtaaactga 30490785  T
Q  203 tttggggagt 212  Q
    ||||||||||    
T  30490786 tttggggagt 30490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 21698996 - 21698924
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||||||||||||||||||||||| |||||  ||  |||||| |||||| |||||||||||    
T  21698996 tgttttaatgttagaaataggttctggttgcatacagcatttagttttacatctttaaactgatttggggagt 21698924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2332062 - 2332124
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||| ||||||||    
T  2332062 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttgatttaacat 2332124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 4232044 - 4231980
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || ||||   |||||||||||||||||||||||    
T  4232044 tgttagaattaggttctggttgcataaaacacttaattatgtatctgtaaactaatttggggagt 4231980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 11140391 - 11140455
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  11140391 tgttagaattaggttctggttgcatacaacacttagtttagcatctgtaaactaatttggggagt 11140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19860048 - 19859984
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| ||||||||||||    
T  19860048 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccaatttggggagt 19859984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 21921650 - 21921586
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||| || ||| |||| ||||||||  |||||||||||||||||||||||    
T  21921650 tgttagaattaggttctggatgtatagaacacttcattacctatctgtaaactaatttggggagt 21921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 27281090 - 27281027
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  27281090 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 27281027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 31926562 - 31926660
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggg 209  Q
    |||||| ||| |||||| |||||||    ||||||  ||||||||||||||||||  ||||||||  |||||||| || ||||||||||| ||||||||    
T  31926562 tttttgagtgaattgagtgtagaaattactgttttgatgttagaaataggttctgagtgcatacaggatttcatttcatatctgtaaactgatttgggg 31926660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 21543179 - 21543118
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  21543179 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 21543118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 22434239 - 22434304
Alignment:
Q  147 gtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  22434239 gtgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 22434304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 23065965 - 23066026
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||  ||||||||  | |||||| ||||||||||||| ||||||||||||    
T  23065965 tagaaataggttctgagtgcatacagtaattcatttcacatctgtaaaccaatttggggagt 23066026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 42094944 - 42095005
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  42094944 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 42095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 47484962 - 47484898
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacat-ttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  |||||  ||||||||||||||||||||||||||    
T  47484962 tgttagaaataggttctgagtgcatacaacaagttcatg-cacatctgtaaactaatttggggagt 47484898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 15315789 - 15315853
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||||| || ||  ||  |||||||||||| ||||||||||||    
T  15315789 tgttagaattaggttctggttgcatacatcacttagttttacatctgtaaaccaatttggggagt 15315853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 20243435 - 20243371
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  ||| |||||| ||||||| || ||||||||||| |||||||||||    
T  20243435 tgttagaaatgggttctgagtgcgtacaacctttcattgcatatctgtaaactgatttggggagt 20243371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 20595397 - 20595461
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  20595397 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 20595461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 21736017 - 21735953
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||| ||  | |||||| |||||||||| ||||||||||||    
T  21736017 tgttagaaataggttctgagtgcatacagcaagttattacatatctgtaaaccaatttggggagt 21735953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 23713086 - 23713022
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||| ||| || ||||||||| |||||  ||  |||||||||||||||||||||||||    
T  23713086 tgttagaaataagttttgattgcatacagcatttagttttacatctgtaaactaatttggggagt 23713022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 29553733 - 29553797
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || |||   ||| ||||||||||||||||||||    
T  29553733 tgttagaattaggttctggttgcatataacacttaatttagcatatgtaaactaatttggggagt 29553797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 29601551 - 29601615
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||| |||| || ||| |||| ||||||||  |||||||||||||||||||||||    
T  29601551 tgttagaattaggtgctggatgtatagaacacttcattacctatctgtaaactaatttggggagt 29601615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 19336694 - 19336599
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttg 206  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||||||  ||||||||||||| |||  || ||||||||||| |||||    
T  19336694 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgagtgcatacaacattccatctcatatctgtaaactgatttg 19336599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 954374 - 954438
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||| ||||| |||||||||||    
T  954374 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgaaaactgatttggggagt 954438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 3706050 - 3706114
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||| ||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  3706050 tgttagaaatgggttatgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 3706114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16882837 - 16882901
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| ||  |||||||||||  | |||  |||||||||||| ||||||||||||    
T  16882837 tgttagaaataggttatgagtgcatacaacaagttatttaacatctgtaaaccaatttggggagt 16882901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 18026013 - 18026077
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  18026013 tgttagaattagtttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 18026077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 24237692 - 24237756
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||| | |||||| ||  || || ||||||||||| |||||||||||    
T  24237692 tgttagaattaggttctggttgtagacaacacttagtttcatatctgtaaactgatttggggagt 24237756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 49328887 - 49328823
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| ||||||    ||||||| ||| |||||||||||    
T  49328887 tgttagaattaggttctggttgcatagaacacttcattgtttatctgtacactgatttggggagt 49328823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 125; Significance: 1e-64; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14640 - 14430
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatg-aaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||||||||| || |||| |||| |  ||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  14640 ttaaggtaagggtgaggtttactt-cagtaatatagattttaaattctgattttggtttaacattgttctgtatgaaaatttggaatttgggttaggttt 14542  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||| |||||   || ||||||||||||    
T  14541 tggttctttgatttttgggtggattgagggtagaaacc-atgttttgatgttagaaataggttctggttgcatacagcatttacgtatacatctgtaaac 14443  T
Q  200 taatttggggagt 212  Q
    |||||||||||||    
T  14442 taatttggggagt 14430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 831 - 621
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatg-aaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||| ||||| || || | |||| |  ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  831 ttaaggtaagggtgaggtatactt-cagtagtatagattttaaattctgattttggtttaacattgttctgtatgaaaattgggaatttgggttaggttt 733  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || |||||||| |||||||||||||||||||||||||| |||||||  |||||||||||| || ||||||||||||||||||  ||| ||||||||||||    
T  732 tgtttctttgaattttgggtggattgagggtagaaacc-ttgttttgatgttagaaatagtttttggttgcatacaacatttagttatacatctgtaaac 634  T
Q  200 taatttggggagt 212  Q
    |||||||||||||    
T  633 taatttggggagt 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 27335 - 27124
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||| |||||||||||||||||||||| | |||| || |||||| |||||||||||||||  || ||  |  |||||||||||||| |||| |||||    
T  27335 ttaaggtgagggtgaggtttactttcaatagtatagattgtaattctgattttggtttaacatgtttttggttagaaattgggaatttgggttaagtttt 27236  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| || ||||| |||| ||||| ||||| ||||||||||||||||||    
T  27235 ggttctttgatttttgggtgaattgagggtagaaacttttgttttagtgttagaattatgttctagttgtatacatcatttaattacacatctgtaaact 27136  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  27135 gatttggggagt 27124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 8371 - 8578
Alignment:
Q  5 ggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttttggt 103  Q
    |||||||||||||||||||||||||| |||||  || |||||| |||||| |||||||||||||||  | ||||||||||||||| || ||||||| | |    
T  8371 ggtaagggtgaggtttactttcaatagtgtaggttgtaattctgattttgatttaacatagttctggttaaaaattgggaatttgggtctaggttt-gat 8469  T
Q  104 tctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaat 203  Q
    ||||||||||||||||| |||||| |||| || | |||||||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||||  |    
T  8470 tctttgatttttgggtgaattgagtgtaggaatcattgttttagtgttagaaatatgttctaattgcatacagcatttcattacacatctgtaaactgtt 8569  T
Q  204 ttggggagt 212  Q
    |||||||||    
T  8570 ttggggagt 8578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2061 - 2271
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| |||||||||||||||  |||||  |  |||||||||||||| || |||| ||    
T  2061 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttggtttaacatgtttctg-gtagaaattgggaatttgggtctagg-tt 2158  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || |||||||||||||||||| ||| || ||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  2159 tgattctttgatttttgggtgaattaagtgtagaaatcattgttttagtgttagaaataagttttggttgcatacaacatttcattacacttctgtaaac 2258  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  2259 tgttttggggagt 2271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 26770 - 26706
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| ||||||||||||    
T  26770 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccaatttggggagt 26706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 7e-48; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 21120758 - 21120969
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||| |||| |||||||||||||| | |||| || |||||| |||||||||||||||||||||| || ||||||||||||||| ||||| || |    
T  21120758 ttaaggtaagagtgatgtttactttcaatagtatagattgtaattctgattttggtttaacatagttctggattaaaattgggaatttgggttagattat 21120857  T
Q  101 ggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | |||||||  |||||| ||| |  ||| ||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||||| |||||||||    
T  21120858 gattctttg-gttttggatggaaaagagtgtagaaacctttgttttagtgttagaattatgttcagattgcatacaacatttcattacacttctgtaaac 21120956  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  21120957 tgttttggggagt 21120969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 25365060 - 25365270
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    |||||||||||||||||||||||||||||| | |||  |  |||||| |||||||||||||||  |||||  |  |||||||||||||| || |||| ||    
T  25365060 ttaaggtaagggtgaggtttactttcaatagtatagtttctaattctgattttggtttaacatgtttctg-gtagaaattgggaatttgggtctagg-tt 25365157  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || ||||| |||||||||||| ||| || |||| || | ||||||||||||||| |||  |||| | ||||||||| ||||| ||||||| |||||||||    
T  25365158 tgattcttggatttttgggtgaattaagtgtaggaatcattgttttagtgttaggaatgtgttcagattgcatacatcattttattacacttctgtaaac 25365257  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  25365258 tgttttggggagt 25365270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 22795799 - 22795961
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    |||||||||||||||||||||||||||||| | | || |  |||||| ||||||||||||| ||||||||   |||| ||||||||||| || |||||||    
T  22795799 ttaaggtaagggtgaggtttactttcaatagtatggattataattctgattttggtttaacctagttctggtagaaa-ttgggaatttgggtctaggttt 22795897  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttc 163  Q
    || ||||| || ||||||  ||| |||| |||| |||| |||||||||||||||||||| ||||    
T  22795898 tgattcttcgaattttggacggaatgagtgtaggaaccattgttttagtgttagaaatatgttc 22795961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 17634933 - 17634724
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacatagttctgtatgaaaattgggaatttgcgttaggttt 99  Q
    |||||||||||||||||||||||||||||| |||||| || |||||| ||||||| ||||||||  || ||   |||||||||||||||| |||  | ||    
T  17634933 ttaaggtaagggtgaggtttactttcaata-tgtagattgtaattctgattttggatttaacatgtttttggtagaaaattgggaatttgggtttagatt 17634835  T
Q  100 tggttctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    || |||||||||||| || ||||   ||| ||||||||| ||| |||||||||||||||  |||| ||||| | |||  || |||||| |||||||||||    
T  17634834 tgattctttgatttt-ggatggaaaagagtgtagaaaccattgctttagtgttagaaatgtgttcaggttgtagacagtatctcattatacatctgtaaa 17634736  T
Q  199 ctaatttgggga 210  Q
    ||  ||||||||    
T  17634735 ctgttttgggga 17634724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20913469 - 20913681
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatg-aaattctaattttggtttaacatagttctgtatgaaaattgggaattt-gcgttaggtt 98  Q
    |||||||||||||||||||||||| || || | |||| |  ||||||| ||||||||||||||| ||| ||||||||| ||||| |||| | |||    |    
T  20913469 ttaaggtaagggtgaggtttactt-cagtagtatagattttaaattctgattttggtttaacattgttatgtatgaaatttggggattttgggtttaagt 20913567  T
Q  99 ttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    |   ||||||| ||| |||||| |||||| |||| || |  || |||  ||||||||||||||| || ||||||||||||||||||| || |||||||||    
T  20913568 tgaattctttggtttatgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttatgattgcatacaacatttcatttcatatctgtaaa 20913667  T
Q  199 ctaatttggggagt 212  Q
    || |||||||||||    
T  20913668 ctgatttggggagt 20913681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 24668966 - 24669174
Alignment:
Q  3 aaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttttg 101  Q
    |||||||||||| ||||||||||||||| |||||| |  |||||| ||||||||||||||   |||||  |  |||||||||||||| | |||| || ||    
T  24668966 aaggtaagggtggggtttactttcaatagtgtagattataattctgattttggtttaacaggtttctg-gtagaaattgggaatttgggtttagattatg 24669064  T
Q  102 gttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
     |||||||  |||||| ||| |  ||| ||||||||| ||||||||||| |||||||| |||| |  |||||||| ||||| ||||||| | ||||||||    
T  24669065 attctttg-gttttggatggaaaagagtgtagaaacc-ttgttttagtgatagaaatatgttcagactgcatacagcattttattacacttttgtaaact 24669162  T
Q  201 aatttggggagt 212  Q
      ||||||||||    
T  24669163 gttttggggagt 24669174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 19036380 - 19036310
Alignment:
Q  142 ttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||||||||  ||||||||||||||  || |  |||||||||||||||||||||||    
T  19036380 ttttagtgttagaaataggttctgagtgcatacaacatttagtttcttatctgtaaactaatttggggagt 19036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 25106756 - 25106816
Alignment:
Q  152 agaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||  ||||||||| |||||||| |||||||||||||| |||||||||||    
T  25106756 agaaataggttctgagtgcatacaatatttcatttcacatctgtaaactgatttggggagt 25106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 20724914 - 20724841
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||||||||||||||||||||| |||||  || || || |||||||| |||||||||||    
T  20724914 ttgttttgatgttagaaataggttctggttgcatacatcatttagtttcatatttgtaaactgatttggggagt 20724841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 27786590 - 27786529
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  27786590 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 27786529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 27791811 - 27791750
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  27791811 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 27791750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 8889256 - 8889316
Alignment:
Q  152 agaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||| |||||||||||| |||||  || || |||||||||||||||||||||||    
T  8889256 agaaataggttatggttgcatacagcatttagtttcatatctgtaaactaatttggggagt 8889316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 15642572 - 15642636
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||| |||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  15642572 tgttagaattaggttatggttgcatagaacacttcattgcctatctgtaaactaatttggggagt 15642636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 19702766 - 19702830
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||  |||| || ||| || |||||||||||||||||||||||    
T  19702766 tgttagaattaggttctggttgcattaaacacttaatttcatatctgtaaactaatttggggagt 19702830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 10684915 - 10684978
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  10684915 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 10684978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 24659673 - 24659606
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgg 207  Q
    |||||| | |||||||||||||||||  ||  |||||||||||||| || ||||||||||||||||||    
T  24659673 tgttttggggttagaaataggttctgagtgtgtacaacatttcatttcatatctgtaaactaatttgg 24659606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 27295283 - 27295346
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  27295283 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 27295346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 25174759 - 25174697
Alignment:
Q  150 ttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| |||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  25174759 ttagaattaggttctggttgcatacaacacttagttttgcatctgtaaactaatttggggagt 25174697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 6743300 - 6743361
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  6743300 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 6743361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 12573197 - 12573144
Alignment:
Q  159 ggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  12573197 ggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 12573144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 19648820 - 19648893
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||| |||||||  | |||||| | ||||||| || |||||||||||||||||||||||    
T  19648820 ttgttttgatgttagaaatgggttctgagtacatacagcctttcatttcatatctgtaaactaatttggggagt 19648893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 23753718 - 23753617
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||||||   ||||| |  ||||||||||||||||||  |||||||| ||  | ||| |||||||| |||||||||| ||||    
T  23753718 tttttgggtgaattgagtgtagaaattgttgttctgatgttagaaataggttctgagtgcatacagcaagttatttcacatctgcaaactaatttcggga 23753619  T
Q  211 gt 212  Q
    ||    
T  23753618 gt 23753617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 36801407 - 36801346
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| |||||| |||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  36801407 tagaattaggttatggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 36801346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 43694523 - 43694462
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  43694523 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 43694462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 4078277 - 4078213
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  4078277 tgttagaattaggttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 4078213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 22860861 - 22860797
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   ||| ||||||||||||||||||||    
T  22860861 tgttagaattaggttctggttgcatacaacacttagttttgcatatgtaaactaatttggggagt 22860797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 24653216 - 24653144
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| | |||||||||||||||||  ||  |||| ||||||||| || || ||||||||||||||||||||    
T  24653216 tgttttggggttagaaataggttctgagtgtgtacagcatttcatttcatatatgtaaactaatttggggagt 24653144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 25268095 - 25268031
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| || ||  ||  | ||||||||||| |||||||||||    
T  25268095 tgttagaaataggttctggttgcatacagcacttagttttatatctgtaaactgatttggggagt 25268031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 28970552 - 28970616
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  | |||||||||  | ||| ||||||||||||| ||||||||||||    
T  28970552 tgttagaaataggttctgagtacatacaacaagttatttcacatctgtaaaccaatttggggagt 28970616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 32910764 - 32910828
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||  ||| ||||||    |||||||||||||||||||||||    
T  32910764 tgttagaattaggttctggttgcataggacacttcattgtttatctgtaaactaatttggggagt 32910828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 23291792 - 23291753
Alignment:
Q  173 acaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  23291792 acaacatttcatttcatatctgtaaactaatttggggagt 23291753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21132582 - 21132644
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||| ||||||||||||| | || | || |||||| |||||| ||||||||    
T  21132582 ttaaggtaagggtgagttttactttcaatagtataaattgtaattctgattttgatttaacat 21132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 22012408 - 22012478
Alignment:
Q  142 ttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| |||||||| ||||||||||| ||||| |||| || ||||   ||||||||||| |||||||||||    
T  22012408 ttttaatgttagaattaggttctggtcgcatagaacacttaattatgtatctgtaaactgatttggggagt 22012478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30195652 - 30195736
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga-atgaaattctaattttg-gtttaacatagttctgtatgaaaattgggaa 85  Q
    |||||||||||||||||||||| ||||||| ||||||  | ||||||| |||||| |||||||| |||||||  |||||||||||||    
T  30195652 ttaaggtaagggtgaggtttac-ttcaatagtgtagattttaaattctgattttgtgtttaacagagttctg-gtgaaaattgggaa 30195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 201744 - 201683
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||| |||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  201744 taaggtaaggctgagatttactttcaatagtatagattgtaattctgattttgatttaacat 201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 12579679 - 12579626
Alignment:
Q  159 ggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  12579679 ggttctgggtgcgtaaaacctttcattgcatatctgtaaactaatttggggagt 12579626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 22841980 - 22841919
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||||||||||| ||||| || |||| |  |||||| |||||| ||||||||    
T  22841980 taaggtaagggtgaggtttactctcaatgatatagattataattctgattttgatttaacat 22841919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 34908 - 34844
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  34908 tgttagaattagtttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 34844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 23333465 - 23333393
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| | ||||||||| |||||||  ||   ||| ||||||||| || |||||||||||||||||||||||    
T  23333465 tgttttggggttagaaatgggttctgagtgtgaacatcatttcatttcatatctgtaaactaatttggggagt 23333393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 23672003 - 23672067
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||| ||||||||||||||| ||  ||   ||| ||||||||||||||||||||    
T  23672003 tgttagaattaggttttggttgcatacaacacttagttttgcatatgtaaactaatttggggagt 23672067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 27730344 - 27730280
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  27730344 tgttagaattagtttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 27730280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 44090365 - 44090429
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||||| |||| || ||||   ||||||||||| |||||||||||    
T  44090365 tgttagaattagtttctggttgcatagaacacttaattatgtatctgtaaactgatttggggagt 44090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 13464 - 13253
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||| ||| ||||||||| |||||| || |||||| |||||| |||||||   || ||   |||| | |||| |||| |||  | |||    
T  13464 ttaaggtaagggtgagatttgctttcaatagtgtagattgtaattctgattttgatttaacaggtttatggtagaaattggggattttgagtttaggttt 13365  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  13364 gattctttgatttttgggtggattggaggtagaaacctttgttttggtgttagaaataggttctgcttgcatacaacattttattacacatctataaact 13265  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  13264 gatttggggagt 13253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2921 - 3132
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||| |||||||||||| ||||||||| |||||| |  |||||| ||||||||||||||   || ||   |||| | |||| |||| |||  | |||    
T  2921 ttaaggtgagggtgaggtttgctttcaatagtgtagattataattctgattttggtttaacaggtttatggtagaaattggggattttgagtttaggttt 3020  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | ||||||| |||||||||| |||||| |||| || | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3021 gattctttggtttttgggtgaattgagtgtaggaatcattgttttcgtgttagaaataggttttggttgcatacaacatttcattacacatctgtaaact 3120  T
Q  201 aatttggggagt 212  Q
     |||||||||||    
T  3121 gatttggggagt 3132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 95645 - 95582
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| | |||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  95645 gttagaaatggattctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 95582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 91739 - 91949
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||||||||||||| | |||| || |||||| ||||| ||||||||||||||||  | ||||||||||||||| ||||| || |    
T  91739 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttcgtttaacatagttctggtt-aaaattgggaatttgggttagattat 91837  T
Q  101 ggttctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | |||||||||||| || ||||   ||| ||||||||| ||||||||||||||| |||  |||| | ||||||||||||||| ||||||  |||||||||    
T  91838 gattctttgatttt-ggatggaaaagagtgtagaaaccattgttttagtgttaggaatgtgttcagattgcatacaacattttattacatttctgtaaac 91936  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  91937 tgttttggggagt 91949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 46033 - 46094
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  46033 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 46094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 51437 - 51498
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  51437 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 51498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 1 - 191
Alignment:
Q  9 agggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggttttggttcttt 108  Q
    ||||||||||||| |||||||| | |||| || |||||| |||||||||||||||  |||||   |||  ||||||||||| |||  | |||| ||||||    
T  1 agggtgaggtttaatttcaatagtatagattgtaattctgattttggtttaacatgtttctggtagaag-ttgggaatttgagtttaggtttgattcttt 99  T
Q  109 gatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    ||||||||||||||||||| |||| || | |||||||||||||||||||| ||||||||||||||||  |||||||| ||| ||||||||||    
T  100 gatttttgggtggattgagtgtaggaatcattgttttagtgttagaaatatgttctggttgcatacagtatttcattgcacttctgtaaact 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 931 - 1068
Alignment:
Q  76 aaattgggaatttgcgt-taggttttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatac 174  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||| |||| |||| || | |||||||||||||||||||| |||| ||||||||||    
T  931 aaattgggaatttgggtctaggttttggttctttgatttttggatggaatgagtgtaggaatcattgttttagtgttagaaatatgttcaggttgcatac 1030  T
Q  175 aacatttcattacacatctgtaaactaatttggggagt 212  Q
    | ||||||||||||| ||||||||||  ||||||||||    
T  1031 agcatttcattacacttctgtaaactgttttggggagt 1068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 77; Significance: 6e-36; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 17321 - 17529
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||| ||||||||| |||||| || |||||| ||||| ||||||||   || ||   |||| | |||| |||| |||  | |||    
T  17321 ttaaggtaagggtgaggtttgctttcaatagtgtagattgtaattctgattttcgtttaacaggtttatggtagaaattggggattttgagtttagattt 17420  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | ||||||| |||||||||| |||||| |||| || | |||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||     
T  17421 gattctttggtttttgggtgaattgagtgtaggaatcattgttttagtgttaaaaataggttctggttgcatccagcattttattacacatctgtaaacc 17520  T
Q  201 aatttgggg 209  Q
     ||||||||    
T  17521 gatttgggg 17529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 259571 - 259507
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| | |||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  259571 tgttagaaatggattctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 259507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 265986 - 265922
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||| ||||||| |||||||||||    
T  265986 tgttagaaatgggttctgagtgcatataacctttcattgcatatcagtaaactgatttggggagt 265922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 6e-36; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 14822388 - 14822180
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||| ||||||||| |||||| || |||||| ||||| ||||||||   || ||   |||| | |||| |||| |||  | |||    
T  14822388 ttaaggtaagggtgaggtttgctttcaatagtgtagattgtaattctgattttcgtttaacaggtttatggtagaaattggggattttgagtttagattt 14822289  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | ||||||| |||||||||| |||||| |||| || | |||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||     
T  14822288 gattctttggtttttgggtgaattgagtgtaggaatcattgttttagtgttaaaaataggttctggttgcatccagcattttattacacatctgtaaacc 14822189  T
Q  201 aatttgggg 209  Q
     ||||||||    
T  14822188 gatttgggg 14822180  T

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Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 13480286 - 13480350
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||    
T  13480286 tgttagaattaggttctggttgcatagaacacttcattacttatctgtaaactaatttggggagt 13480350  T

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Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 21882405 - 21882332
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| ||||||||||| || |||||||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  21882405 ttgttctagtgttagaattatgttctggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 21882332  T

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Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 30239951 - 30239850
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||| ||  |||||||| ||||||||| || |||||||||||||||||||||    
T  30239951 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttttgagtgcatacagcatttcatttcatatctgtaaactaatttgggga 30239852  T
Q  211 gt 212  Q
    ||    
T  30239851 gt 30239850  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 16485538 - 16485474
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||||||  || || ||||||||||| |||||||||||    
T  16485538 tgttagaattaggttctggttgcatacaacatttagtttcatatctgtaaactgatttggggagt 16485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 18272157 - 18272093
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| || ||  ||  |||||||||||||||||||||||||    
T  18272157 tgttagaaataggttctggttgcatacagcacttagttttacatctgtaaactaatttggggagt 18272093  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 15325763 - 15325702
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||||||||| |||||  || || ||||||||||| |||||||||||    
T  15325763 tagaaataggttctggttgcatacatcatttagtttcatatctgtaaactgatttggggagt 15325702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 41799232 - 41799293
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  41799232 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 41799293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 42702122 - 42702061
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  42702122 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 42702061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 51601353 - 51601414
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  51601353 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 51601414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 51607234 - 51607295
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  51607234 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 51607295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 53748035 - 53748096
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  53748035 tagaaatgggttctgggtgcataaaacctttcatttcatatctgtaaactaatttggggagt 53748096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 1584712 - 1584648
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || ||||   |||||||||||||||||||||||    
T  1584712 tgttagaattaggttctggttgcatagaacacttaattatgtatctgtaaactaatttggggagt 1584648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 15004425 - 15004489
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| ||||| ||  |||||||||||||||||| || ||||||||||| |||||||||||    
T  15004425 tgttagaaacaggttatgagtgcatacaacatttcatttcatatctgtaaactgatttggggagt 15004489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 15547451 - 15547387
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||| |||||   |||||||||| |||||| || |||||||||||||||||||||||    
T  15547451 tgttagaaatagtttctgagcgcatacaacaattcatttcatatctgtaaactaatttggggagt 15547387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16228403 - 16228467
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  16228403 tgttagaattaggttctggttgcatacaacacttagttttgcatctgtaaactaatttggggagt 16228467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 635041 - 635104
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  635041 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 635104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 16445824 - 16445761
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  16445824 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggggagt 16445761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 11201406 - 11201468
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacat 63  Q
    ||||||||||||||||||||||||||||| | |||| || |||||| ||||||| ||||||||    
T  11201406 taaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttggatttaacat 11201468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 11208137 - 11208199
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttgg-tttaacat 63  Q
    ||||||||||||||||||||||||||||| | |||| || |||||| ||||||| ||||||||    
T  11208137 taaggtaagggtgaggtttactttcaatagtatagattgtaattctgattttggatttaacat 11208199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 16999448 - 16999509
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||  ||||||||  | |||||| ||||||||||||| ||||||||||||    
T  16999448 tagaaataggttctgagtgcatacagtaattcatttcacatctgtaaaccaatttggggagt 16999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 18165560 - 18165633
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||| ||||||||||||||||||| || ||  ||   ||||||||||||||||||||||||    
T  18165560 ttgttttgatgttagaattaggttctggttgcatacagcacttagttttgcatctgtaaactaatttggggagt 18165633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 14063608 - 14063544
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||||||  ||    ||||||||||| |||||||||||    
T  14063608 tgttagaattaggttctggttgcatacaacatttagtttagtatctgtaaactgatttggggagt 14063544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 23122498 - 23122434
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  23122498 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 23122434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 23724078 - 23724142
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  23724078 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 23724142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 41528369 - 41528433
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   |||||||||||| |||||||||||    
T  41528369 tgttagaattaggttctggttgcatacaacacttagtttagcatctgtaaactgatttggggagt 41528433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 14507095 - 14507032
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggag 211  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| ||||||||||    
T  14507095 tgttagaaatgggttctgagtgcatataacttttcattgcatatctgtaaactgatttggggag 14507032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 20941158 - 20941099
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    ||||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||    
T  20941158 gttagaaatgggttctgagtgcataaaacctttcattgcatatctgtaaactaatttggg 20941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 13454630 - 13454557
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||| |||||||  ||||||||   ||||||| || |||||||||| ||||||||||||    
T  13454630 ttgttttgatgttagaaatgggttctgagtgcatacagactttcatttcatatctgtaaaccaatttggggagt 13454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 3259270 - 3259334
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||||| | |||| || ||||   |||||||||||||||||||||||    
T  3259270 tgttagaattagtttctggttgcacagaacacttaattatgtatctgtaaactaatttggggagt 3259334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3863290 - 3863326
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga 37  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  3863290 ttaaggtaagggtgaggtttactctcaatagtgtaga 3863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3872047 - 3872083
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga 37  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  3872047 ttaaggtaagggtgaggtttactctcaatagtgtaga 3872083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 7360051 - 7359987
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||| ||||| |||| || ||||   ||||||||||| |||||||||||    
T  7360051 tgttagaattaggttctggtcgcatagaacacttaattatgtatctgtaaactgatttggggagt 7359987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 5919 - 6131
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgtt-aggttt 99  Q
    |||||||||||||||||||||||||||||| | |||| || |||| | |||||||||||||||  || ||  |  |||||||||||||| ||| |||||     
T  5919 ttaaggtaagggtgaggtttactttcaatagtatagattgtaattttgattttggtttaacatgtttttggttagaaattgggaatttgggtttaggtta 6018  T
Q  100 tggttctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    || ||||||| ||||||| | ||   ||| ||||||||||||||||||||||||||| || |||| |  |||||||| ||||||||||||| ||||||||    
T  6019 tgattctttg-tttttggatagaaaagagtgtagaaacctttgttttagtgttagaattatgttcagactgcatacagcatttcattacacttctgtaaa 6117  T
Q  199 ctaatttggggagt 212  Q
     | |||||||||||    
T  6118 ttgatttggggagt 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 46467 - 46332
Alignment:
Q  77 aattgggaatttgcgt-taggttttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcataca 175  Q
    ||||||||||||| || ||||||| | |||||||||||||||||| |||||| |||| |||| |||| || |||||||||||||||||||  ||||||||    
T  46467 aattgggaatttgggtctaggttt-gattctttgatttttgggtgaattgagtgtaggaaccattgtgttggtgttagaaataggttctgagtgcataca 46369  T
Q  176 acatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| || ||||||||||| |||||||||||    
T  46368 acatttcatttcatatctgtaaactgatttggggagt 46332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 71595 - 71397
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||| ||||||||||||| | |||| || |||||| ||||||||||||||||||||||  | ||||||||||||||  ||||| || |    
T  71595 ttaaggtaagggtgagatttactttcaatagtatagattgtaattctgattttggtttaacatagttctggtt-aaaattgggaattttggttagattat 71497  T
Q  101 ggttctttgatttttgggtggatt-gagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | |||||| ||||| || ||||   ||| ||||||||| |||| |||||||||| |||  |||| | ||||||||||||||| ||||||| |||||||||    
T  71496 gattctttaatttt-ggatggaaaagagtgtagaaaccattgtgttagtgttaggaatgtgttcagattgcatacaacattttattacacttctgtaaac 71398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 124068 - 124265
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||||| |  | ||||||||||||||| ||||| || |    
T  124068 ttaaggtaagggtgaggtttactttcaatagtgtagattgtaattctgattttggtttaacatagttccg-gttaaaattgggaatttgggttagattat 124166  T
Q  101 ggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | ||| |||| |||||| ||| |  ||| ||||||||| |||||| |||||||  |||  |||| | ||||||||||||||| ||||||| |||||||||    
T  124167 gattc-ttga-ttttggatggaaaagagtgtagaaaccattgtttcagtgttacgaatgtgttcagattgcatacaacattttattacacttctgtaaac 124264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 65; Significance: 9e-29; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 143701 - 143490
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttt 99  Q
    ||||||| |||||||||||||||||||||| | |||| |  |||||| ||||||||||||||| ||||||   |||||||||||||||  || |||||||    
T  143701 ttaaggtcagggtgaggtttactttcaatagtatagattataattctgattttggtttaacatggttctggtagaaaattgggaatttaggtctaggttt 143602  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || ||||| ||||||||  |||| |||| |||| |||| ||||||||||||||| |||   ||| ||||| | |||||| || ||||||  |||||||||    
T  143601 tgattcttggatttttgaatggaatgagtgtaggaaccattgttttagtgttag-aatgctttcaggttgtagacaacactttattacaattctgtaaac 143503  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  143502 tgttttggggagt 143490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 36600 - 36392
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    ||||||||||||||||||||||| ||| || | |||| |  |||||| |||||||||||||||  |||||  |  |||||||||||||| |||  | |||    
T  36600 ttaaggtaagggtgaggtttactctcattagtatagattataattctgattttggtttaacatgtttctg-gtagaaattgggaatttgggtttaggttt 36502  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    | |||||||| || | | |||| |||| ||||||||| ||||||||||||||| |||   ||| | ||||||| | ||||||||||||| ||||||||||    
T  36501 gattctttgaattctagatggaatgagtgtagaaaccattgttttagtgttag-aatgtattcagattgcataaagcatttcattacacttctgtaaact 36403  T
Q  201 aatttggggag 211  Q
    | |||||||||    
T  36402 attttggggag 36392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 62500 - 62564
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  62500 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 62564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 67244 - 67216
Alignment:
Q  2 taaggtaagggtgaggtttactttcaata 30  Q
    |||||||||||||||||||||||||||||    
T  67244 taaggtaagggtgaggtttactttcaata 67216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 42073 - 42284
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    |||||||||||||||||||||||||||||| || ||| |  |||||| | ||||||||||||||||||||  | ||||||||||||||| | |||| ||     
T  42073 ttaaggtaagggtgaggtttactttcaatagtgcagattataattctgagtttggtttaacatagttctg-gttaaaattgggaatttgggtttagatta 42171  T
Q  100 tggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
     | |||||||| |||||| ||| |  ||| || |||||| ||||||||||||||||| || |||| |  |||||||| |||||| |||||| ||||||||    
T  42172 cgattctttga-ttttggatggaaaagagtgttgaaaccattgttttagtgttagaattatgttcagactgcatacatcatttccttacacttctgtaaa 42270  T
Q  199 ctaatttggggagt 212  Q
    ||  ||||||||||    
T  42271 ctgttttggggagt 42284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 52768 - 52979
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    |||||||||||||||||||||||||||||| || ||| |  |||||| | ||||||||||||||||||||  | ||||||||||||||| | |||| ||     
T  52768 ttaaggtaagggtgaggtttactttcaatagtgcagattataattctgagtttggtttaacatagttctg-gttaaaattgggaatttgggtttagatta 52866  T
Q  100 tggttctttgatttttgggtgg-attgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
     | |||||||| |||||| ||| |  ||| || |||||| ||||||||||||||||| || |||| |  |||||||| |||||| |||||| ||||||||    
T  52867 cgattctttga-ttttggatggaaaagagtgttgaaaccattgttttagtgttagaattatgttcagactgcatacatcatttccttacacttctgtaaa 52965  T
Q  199 ctaatttggggagt 212  Q
    ||  ||||||||||    
T  52966 ctgttttggggagt 52979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 24033 - 23823
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttct-gtatgaaaattgggaatttgcgt-taggtt 98  Q
    |||||||||||||||||||||||||||||| | |||| | ||||||| |||||||||||||||  |||| ||| |  |||||||||| |  || ||||||    
T  24033 ttaaggtaagggtgaggtttactttcaatagtatagattaaaattctgattttggtttaacatgtttctggtagg--aattgggaatatcggtctaggtt 23936  T
Q  99 ttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    ||| |||||||| || | | ||||  | | ||||||||| ||| |||||||||||||||  |||| |  |||||||||||||||||||||| | ||||||    
T  23935 ttgattctttgaattctagatggaaagtgtgtagaaaccattg-tttagtgttagaaatgtgttcagactgcatacaacatttcattacacttttgtaaa 23837  T
Q  199 ctaatttggggagt 212  Q
    ||| |||| |||||    
T  23836 ctagtttgaggagt 23823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 2939 - 2743
Alignment:
Q  15 aggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctg-tatgaaaattgggaatttgcgt-taggttttggttctttgatt 112  Q
    |||||||||||||||| | |||| | ||||||| |||||||||||||||  || || || |||  ||||||||||| || ||||||| | |||||||| |    
T  2939 aggtttactttcaatagtatagattaaaattctgattttggtttaacatgtttatggtaggaa--ttgggaatttgggtctaggtttagattctttgaat 2842  T
Q  113 tttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    | | | ||||  | | ||||||||| |||||| ||||||||||||  |||| |  |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  2841 tctagatggaaagtgtgtagaaaccattgttt-agtgttagaaatgtgttcagactgcatacagcatttcattacacttctgtaaactagtttggggagt 2743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21879 - 21670
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    ||||||||||||||||||||||| |||||| | |||| |  |||||| ||||| ||||||||||||||||  |  |||||| | ||||| | ||||||||    
T  21879 ttaaggtaagggtgaggtttactctcaatagtatagattataattctgatttttgtttaacatagttctg-gtagaaattgaggatttgggtttaggttt 21781  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || ||||||||||||||| ||||  ||| ||||||||| |||   ||||||||| ||||||||| ||||| ||||| || || |||| || |||||||||    
T  21780 tgattctttgatttttggatggaaagagtgtagaaacc-ttgcaatagtgttag-aataggttcaggttgtatacatcaatttattatacttctgtaaac 21683  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  21682 tgttttggggagt 21670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 40796 - 41007
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    |||||||||||||||||||||||||||||| |||||| |  |||| | ||||||| ||||||||||||||  | ||||||||||||||| | |||| ||     
T  40796 ttaaggtaagggtgaggtttactttcaatagtgtagattataattttgattttgggttaacatagttctg-gttaaaattgggaatttgggtttagatta 40894  T
Q  100 tggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    || |||||||||||| |   | |  ||| || |||||| ||||||||||||||| |||  |||| | || |||||| ||||| ||||||| | |||||||    
T  40895 tgattctttgattttagatggaaaagagtgttgaaaccattgttttagtgttaggaatgtgttcagatttcatacagcattttattacacttttgtaaac 40994  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  40995 tgttttggggagt 41007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 55229 - 55293
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  55229 tgttagaaataggttctggttgcatacaacatttcatttcacatctgtaaactgatttggggagt 55293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 61257 - 61366
Alignment:
Q  103 ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaa 202  Q
    ||||||| |||||||||| |||||| |||| || |  || |||  |||||||||||||||||| ||||||||||||||||||| || ||||||||||| |    
T  61257 ttctttgctttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgattgcatacaacatttcatttcatatctgtaaactga 61356  T
Q  203 tttggggagt 212  Q
    ||||||||||    
T  61357 tttggggagt 61366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 59694 - 59803
Alignment:
Q  103 ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaa 202  Q
    ||||||| |||||||||| || ||| |||| || |  || |||  |||||||||||||||||| ||||||||||||||||||| || || | ||| || |    
T  59694 ttctttggtttttgggtgaatagagtgtaggaatcactggtttgatgttagaaataggttctgattgcatacaacatttcatttcatatatataacctga 59793  T
Q  203 tttggggagt 212  Q
    ||||||||||    
T  59794 tttggggagt 59803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 4638 - 4739
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| ||||||| |  || |||  ||||||||||||||||||  |||||||||||||||||| || ||||||||||| |||||||||    
T  4638 tttttgggtgaattgagtgtagaaatcactggtttgatgttagaaataggttctgagtgcatacaacatttcatttcatatctgtaaactgatttgggga 4737  T
Q  211 gt 212  Q
    ||    
T  4738 gt 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 19820 - 19921
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| ||||||| |  || |||  ||||||||||||||||||  |||||||||||||||||| || ||||||||||| |||||||||    
T  19820 tttttgggtgaattgagtgtagaaatcactggtttgatgttagaaataggttctgagtgcatacaacatttcatttcatatctgtaaactgatttgggga 19919  T
Q  211 gt 212  Q
    ||    
T  19920 gt 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 26468 - 26261
Alignment:
Q  3 aaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggttttg 101  Q
    ||||||||||||| |||||||||||||| | |||  || |||||| |||||||||||||||  |||||  |  |||||||||||||| || |||| ||||    
T  26468 aaggtaagggtgacgtttactttcaatagtatagtttgtaattctgattttggtttaacatgtttctg-gtagaaattgggaatttgggtctagg-tttg 26371  T
Q  102 gttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaacta 201  Q
     || ||| ||||||||||| |||| | |||| || | |||||||||  |||| |||  |||| | ||||||||| ||||| ||||||| ||||||||||     
T  26370 atttttttatttttgggtgaattg-gtgtaggaatcattgttttagcattaggaatgtgttcagattgcatacagcattttattacacttctgtaaactg 26272  T
Q  202 atttggggagt 212  Q
     ||||||||||    
T  26271 ttttggggagt 26261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 517 - 618
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||    ||||||  ||||||||||||||||||||||||||||||||||  || || ||||||||||| |||||||||    
T  517 tttttgggtgaattgagtgtaggaattactgttttgatgttagaaataggttctggttgcatacaacatttagtttcatatctgtaaactgatttgggga 616  T
Q  211 gt 212  Q
    ||    
T  617 gt 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 6555 - 6391
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatg-aaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgtt-aggtt 98  Q
    |||||||||||||||||||||||||||||| | | || |  ||||||| | ||||||||||| ||||||||   |||| ||||||||||| ||  |||||    
T  6555 ttaaggtaagggtgaggtttactttcaatagtatggattataaattctgaatttggtttaacctagttctggtagaaa-ttgggaatttgggtcgaggtt 6457  T
Q  99 ttggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttct 164  Q
    ||| |||||  | || |||  ||| |||| |||| |||| ||||||||||||||||||||||||||    
T  6456 ttgattcttcaaattctggacggagtgagtgtaggaaccattgttttagtgttagaaataggttct 6391  T

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Target: scaffold0102 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 30700 - 30636
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||||||||||||| |||||  || || |||||||||||||||||||||||    
T  30700 tgttagaaataggttctggttgcatacagcatttagtttcatatctgtaaactaatttggggagt 30636  T

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Target: scaffold0025 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 71979 - 71915
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||||||||||||||| || |||||||||||||||||||||||    
T  71979 tgttagaaatgggttctgagtgcatacaacatttcatttcatatctgtaaactaatttggggagt 71915  T

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Target: scaffold0025; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 77620 - 77547
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||||||||||||||||||| |||||||||||  | ||| |  |||| ||||||||||||||||||    
T  77620 ttgttttgatgttagaaataggttctgggtgcatacaacaagttatttcgtatctataaactaatttggggagt 77547  T

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Target: scaffold0121 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 10205 - 10070
Alignment:
Q  76 aaattgggaatttgcgttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcata 173  Q
    |||||||||||| | ||||| ||||||  |||||||||||| ||||| |||||| |||| |||| | |||||  ||||||||||||||||||  ||||||    
T  10205 aaattgggaatt-gagttagcttttggatttctttgatttt-gggtgaattgagtgtaggaaccct-gttttgatgttagaaataggttctgagtgcata 10109  T
Q  174 caacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||  |||||||| |||||||||||| | |||||||||||    
T  10108 cagtatttcatttcacatctgtaaattgatttggggagt 10070  T

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Target: scaffold0003 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 100029 - 100227
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg-gtttaacatagttctgtatgaaaattgggaatttgcg-ttaggttt 99  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||| |||||| ||||||||||||||||  | ||||||||| ||||| | |||| ||     
T  100029 taaggtaagggtgaggtttactttcaatagtatagattataattctgattttgagtttaacatagttctg-gtaaaaattggggatttgggtttagtttc 100127  T
Q  100 tggttctttgatttttgggtggattgag--ggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaa 197  Q
    || |||||||| |||||| ||||  |||   ||||||||| |||||||||||||||||||   ||| ||||| | |||||| || ||||||| |||||||    
T  100128 tgattctttga-ttttggatgga-agagtatgtagaaacc-ttgttttagtgttagaaatgcattcaggttgtagacaacaatttattacacttctgtaa 100224  T

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Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 80307 - 80376
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg-gtttaacatagttctg 70  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||| |||||| ||||||||||||||||    
T  80307 taaggtaagggtgaggtttactttcaatagtatagattataattctgattttgagtttaacatagttctg 80376  T

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Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 10195 - 10060
Alignment:
Q  77 aattgggaatttgcgttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatac 174  Q
    ||||||||||| | ||||||||||||  ||||||   ||||||||| |||||| |||| |||| | |||||  ||||||||||||||||||  |||||||    
T  10195 aattgggaatt-gagttaggttttggatttcttttgattttgggtgaattgagtgtaggaaccct-gttttgatgttagaaataggttctgagtgcatac 10098  T
Q  175 aacatttcattacacatctgtaaactaatttggggagt 212  Q
    |  |||||||| |||||||||||| | |||||||||||    
T  10097 agtatttcatttcacatctgtaaattgatttggggagt 10060  T

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Target: scaffold0124; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 41395 - 41334
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||| |||||| ||| ||||||| || |||||||| ||||||||||||||    
T  41395 tagaaatgggttctgggtgcataaaacctttcattgcatatctgtaagctaatttggggagt 41334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 92 - 201
Alignment:
Q  103 ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaa 202  Q
    ||||||| |||||||||| |||||| |||| || |  || |||  |||||||||||| |||||  |||||||| ||||||||| || ||||||||||| |    
T  92 ttctttggtttttgggtgaattgagtgtagtaatcactggtttgatgttagaaatagattctgagtgcatacatcatttcatttcatatctgtaaactga 191  T
Q  203 tttggggagt 212  Q
    ||||||||||    
T  192 tttggggagt 201  T

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Target: scaffold0661 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 3304 - 3413
Alignment:
Q  103 ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaa 202  Q
    ||||||| |||||||||| |||||| |||| || |  || |||  ||||||||||||||| ||  ||||||||||||||  || || |||||||||||||    
T  3304 ttctttggtttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttttgagtgcatacaacatttagtttcatatctgtaaactaa 3403  T
Q  203 tttggggagt 212  Q
    ||||||||||    
T  3404 tttggggagt 3413  T

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Target: scaffold0301 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 12692 - 12765
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||| |||||||  |||||||||| ||||||| || |||||||||||||||||||||||    
T  12692 ttgttttgatgttagaaatgggttctgagtgcatacaacctttcatttcatatctgtaaactaatttggggagt 12765  T

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Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 8553 - 8626
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||||||||| |||||||||||||| ||  ||  |||||||||||||||||||||||||    
T  8553 ttgttttgatgttagaaataggttcgggttgcatacaacacttagttttacatctgtaaactaatttggggagt 8626  T

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Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 152627 - 152700
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||||||||||| ||||||||||||||||||||||  || || ||||||||||| |||||||||||    
T  152627 ttgttttgatgttagaaatatgttctggttgcatacaacatttagtttcatatctgtaaactgatttggggagt 152700  T

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Target: scaffold0708 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 2709 - 2773
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| |||||| |  |||||||||||||||||||||||    
T  2709 tgttagaattaggttctggttgcatagaacacttcattgcttatctgtaaactaatttggggagt 2773  T

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Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 28131 - 28067
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||||||||||||||||||  || || |||| |||||| |||||||||||    
T  28131 tgttagaaataggttctggttgcatacaacatttagtttcatatctataaactgatttggggagt 28067  T

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Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 147836 - 147772
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  ||||||||  |||||||| |||||||||||||| |||||||||||    
T  147836 tgttagaaataggttctgagtgcatacagtatttcatttcacatctgtaaactgatttggggagt 147772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 187084 - 187185
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||   ||||| |  ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| ||||||||||    
T  187084 tttttgggtgaattgagtgtaggaattgttgttctgatgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccaatttgggga 187183  T
Q  211 gt 212  Q
    ||    
T  187184 gt 187185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 196711 - 196812
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||   ||||| |  ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| ||||||||||    
T  196711 tttttgggtgaattgagtgtaggaattgttgttctgatgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccaatttgggga 196810  T
Q  211 gt 212  Q
    ||    
T  196811 gt 196812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 155023 - 154959
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  || |||||  |||||||| |||||||||||||| |||||||||||    
T  155023 tgttagaaataggttctgagtggatacagtatttcatttcacatctgtaaactgatttggggagt 154959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 173615 - 173676
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  173615 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 173676  T

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Target: scaffold0298 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 19288 - 19153
Alignment:
Q  76 aaattgggaatttgcgttaggttttgg--ttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcata 173  Q
    |||||||||||| | ||||| ||||||  |||||||||||| ||||| |||||| |||| |||| | |||||  ||||||||||||||||||  || |||    
T  19288 aaattgggaatt-gagttagcttttggatttctttgatttt-gggtgaattgagtgtaggaaccct-gttttgatgttagaaataggttctgagtgtata 19192  T
Q  174 caacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||  |||||||| |||||||||||||| ||||| |||||    
T  19191 cagtatttcatttcacatctgtaaactgatttgaggagt 19153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 257 - 194
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||| |||||||| |||||| ||| ||||||| || |||||||||||||||||||||||    
T  257 gttagaaatgggttctgggtgcataaaacctttcattgcatatctgtaaactaatttggggagt 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 11306 - 11242
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||| ||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  11306 tgttagaattaggttctagttgcatacaacacttagttttgcatctgtaaactaatttggggagt 11242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 1434 - 1361
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| ||||||||||| ||||||||||||||||| | || ||  ||  |||| ||||||||||||||| ||||    
T  1434 ttgttctagtgttagaattaggttctggttgcatatagcacttagttttacatttgtaaactaatttggagagt 1361  T

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Target: scaffold0203 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 16417 - 16578
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggtttt 100  Q
    ||||||||||||||||||||||||||||| | | || |  |||||| ||||||||||||  ||||||||  |  |||||||||||||| || ||||||||    
T  16417 taaggtaagggtgaggtttactttcaatagtatggattttaattcttattttggtttaagctagttctg-gtagaaattgggaatttgggtctaggtttt 16515  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttc 163  Q
      |||||  | || |||  ||| |||| |||| || | |||||||||||||||||||| ||||    
T  16516 tattcttcaaattctggacggaatgagtgtaggaatcattgttttagtgttagaaatatgttc 16578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 56354 - 56515
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggtttt 100  Q
    |||||||||| ||| |||||||||||||| | | || |  |||| | ||||||||||||| ||||||||   |||| ||||||||||| || ||||||||    
T  56354 taaggtaaggatgatgtttactttcaatagtatggattataattatgattttggtttaacctagttctggtagaaa-ttgggaatttgggtctaggtttt 56452  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttc 163  Q
    | ||||| || || |||  ||| |||| |||| |||| |||||||| ||||||||||| ||||    
T  56453 gattcttcgaattctggacggaatgagtgtaggaaccattgttttaatgttagaaatatgttc 56515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 142279 - 142118
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgt-taggtttt 100  Q
    |||||||||| ||| |||||||||||||| | | || |  |||| | ||||||||||||| ||||||||   |||| ||||||||||| || ||||||||    
T  142279 taaggtaaggatgatgtttactttcaatagtatggattataattatgattttggtttaacctagttctggtagaaa-ttgggaatttgggtctaggtttt 142181  T
Q  101 ggttctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttc 163  Q
    | ||||| || || |||  ||| |||| |||| |||| |||||||| ||||||||||| ||||    
T  142180 gattcttcgaattctggacggaatgagtgtaggaaccattgttttaatgttagaaatatgttc 142118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 2241 - 2314
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||||||||||||||||||||| || ||  ||  | |||||||||||||||||||||||    
T  2241 ttgttttgatgttagaaataggttctggttgcatacagcaattagttttatatctgtaaactaatttggggagt 2314  T

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Target: scaffold0790 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 5465 - 5310
Alignment:
Q  43 attctaattttgg-tttaacatagttctgtatgaaaattgggaatttgcgttaggttttggttctttgatttttgggtggatt-gagggtagaaaccttt 140  Q
    ||||| ||||||| |||| ||||||||||  | ||||||||||||||| ||||| || || |||||||||||| || ||||   ||| || |||||||||    
T  5465 attctgattttggatttagcatagttctggtt-aaaattgggaatttgggttagattatgattctttgatttt-ggatggaaaagagtgtggaaaccttt 5368  T
Q  141 gttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaa 198  Q
    ||||||||||||||| || |||| |  ||||||||  |||||||||||| | ||||||    
T  5367 gttttagtgttagaattatgttcagactgcatacagtatttcattacacttatgtaaa 5310  T

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Target: scaffold0323 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 8148 - 8075
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  ||||| |||| |||||||  |||||||||| ||||||| || |||||||||||||||||||||||    
T  8148 ttgttttgatgttataaatgggttctgagtgcatacaacctttcatttcatatctgtaaactaatttggggagt 8075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 18857 - 18647
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacatagttctgtatgaaaattgggaatttgcgttaggtttt 100  Q
    |||||||||||||||| ||||||||||||  | |||| |  |||||| |||||||||||||||  || ||  |  |  ||||||||| |  |||| ||||    
T  18857 ttaaggtaagggtgagatttactttcaattgtatagattataattcttattttggtttaacatgtttttggtt--agtttgggaattgggtttagatttt 18760  T
Q  101 ggtt-ctttgatttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaac 199  Q
    | || ||||||||||||| ||||  ||| |||||| || |    |||||| |||||||| |||  | ||||||||||||||| ||||||| |||||||||    
T  18759 gatttctttgatttttggatggaaagagtgtagaatccatgacattagtgatagaaatatgtttagattgcatacaacattttattacacttctgtaaac 18660  T
Q  200 taatttggggagt 212  Q
    |  ||||||||||    
T  18659 tgttttggggagt 18647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 430 - 362
Alignment:
Q  144 ttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| || ||||| |||| | ||||||||||||| | ||||||| ||||||||||  ||||||||||    
T  430 ttagtgatataaatatgttcagattgcatacaacatgttattacacttctgtaaactgttttggggagt 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 28743 - 28670
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||||||||||||||||||||| |||||  || || || |||||||| |||||||||||    
T  28743 ttgttttgatgttagaaataggttctggttgcatacatcatttagtttcatatttgtaaactgatttggggagt 28670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 22022 - 22119
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    |||||||||| ||||||||||| || |  || |||  |||||||||||||||||   ||||||||| |||||||| || ||||||||||| |||||||    
T  22022 tttttgggtgaattgagggtaggaatcactggtttgatgttagaaataggttcttagtgcatacaatatttcatttcatatctgtaaactgatttggg 22119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 26219 - 26316
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggg 208  Q
    |||||||||| ||||||||||| || |  || |||  |||||||||||||||||   ||||||||| |||||||| || ||||||||||| |||||||    
T  26219 tttttgggtgaattgagggtaggaatcactggtttgatgttagaaataggttcttagtgcatacaatatttcatttcatatctgtaaactgatttggg 26316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 13737 - 13636
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||||||  |||||||| ||||||||| || ||||||||||| | |||||||    
T  13737 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgagtgcatacagcatttcatttcatatctgtaaactgagttgggga 13638  T
Q  211 gt 212  Q
    ||    
T  13637 gt 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 206980 - 207081
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||    ||||||| |||| |||||||||| |||||||||||| |||||  || || ||||||||||| |||||||||    
T  206980 tttttgggtgaattgagtgtaggaattactgttttaatgttcgaaataggttttggttgcatacatcatttagtttcatatctgtaaactgatttgggga 207079  T
Q  211 gt 212  Q
    ||    
T  207080 gt 207081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 96776 - 96675
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| ||||||||||| ||   ||||| |  |||||| |||||||||||  |||||||||||  | ||| ||||||||||||| ||||||||||    
T  96776 tttttgggtgaattgagggtaggaattgttgttctgatgttagtaataggttctgagtgcatacaacaagttatttcacatctgtaaaccaatttgggga 96677  T
Q  211 gt 212  Q
    ||    
T  96676 gt 96675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 448954 - 449018
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  ||||||||||||||  || || ||||||||||| |||||||||||    
T  448954 tgttagaaataggttctgaatgcatacaacatttagtttcatatctgtaaactgatttggggagt 449018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 179845 - 179781
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||| | |||||| ||  ||   ||||||||||||||||||||||||    
T  179845 tgttagaattaggttctggttgtagacaacacttagttttgcatctgtaaactaatttggggagt 179781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 511889 - 511953
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| ||   ||||||   ||||||||||||||||||||||||    
T  511889 tgttagaattgggttctggttgcatagaaacattcatttttcatctgtaaactaatttggggagt 511953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 3132 - 3068
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  ||||||||||||||  || || ||||||||||| |||||||||||    
T  3132 tgttagaaataggttctgaatgcatacaacatttagtttcatatctgtaaactgatttggggagt 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 19425 - 19489
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||| |||||| |||| |||||| |  |||||||||||||||||||||||    
T  19425 tgttagaattaggttctggatgcatagaacacttcattgcttatctgtaaactaatttggggagt 19489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 20461 - 20397
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||| ||| |||| ||||||||  |||||||||||||||||||||||    
T  20461 tgttagaattagattctggttgtatagaacacttcattacttatctgtaaactaatttggggagt 20397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 23123 - 23187
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||| ||||||||| ||| |||| ||||||||  |||||||||||||||||||||||    
T  23123 tgttagaattagattctggttgtatagaacacttcattacttatctgtaaactaatttggggagt 23187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 171097 - 171161
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||| |||| || |||   ||||||||||||||||||||||||    
T  171097 tgttagaattaggttctggttgcatataacacttaatttagcatctgtaaactaatttggggagt 171161  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 371268 - 371204
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| ||||||||||||    
T  371268 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccaatttggggagt 371204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 48469 - 48532
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||  ||  |||| ||||||||| || |||||||||||||||||||||||    
T  48469 gttagaaataggttctgagtgtgtacagcatttcatttcatatctgtaaactaatttggggagt 48532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 43403 - 43466
Alignment:
Q  149 gttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||  ||  |||| ||||||||| || || ||||||||||||||||||||    
T  43403 gttagaaataggttctgagtgtgtacagcatttcatttcatatatgtaaactaatttggggagt 43466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 3497 - 3555
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttg 206  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||||||||||    
T  3497 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaactaatttg 3555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 911 - 973
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| |||||||||||||| | |||| |  |||||| |||||||||||||||    
T  911 ttaaggtaagggtgatgtttactttcaatagtatagattataattctgattttggtttaacat 973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 1053 - 1109
Alignment:
Q  144 ttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    |||||| |||||||| |||| | ||||||||||||||| ||||||| ||||||||||    
T  1053 ttagtgatagaaatatgttcagattgcatacaacattttattacacttctgtaaact 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 2304 - 2215
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaact 200  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||||||  ||||| |||||||||||| || |||||||||||    
T  2304 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgagtgcatgcaacatttcatttcatatctgtaaact 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 7847 - 7746
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttgggga 210  Q
    |||||||||| |||||| |||| ||   ||||| |  ||||||||||||||| ||  |||||||||||  | ||||||||||| ||||| ||||||||||    
T  7847 tttttgggtgaattgagtgtaggaattgttgttctgatgttagaaataggttttgagtgcatacaacaagttattacacatctataaaccaatttgggga 7748  T
Q  211 gt 212  Q
    ||    
T  7747 gt 7746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 47137 - 47210
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||| || ||||||||||||||| ||  |||||||| ||  | ||| ||||||||||||||||||||||||||    
T  47137 ttgttctaatgttagaaataggttatgagtgcatacagcaagttatttcacatctgtaaactaatttggggagt 47210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 42812 - 42748
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| ||||| |||||    
T  42812 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttgtggagt 42748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 39524 - 39463
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  39524 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 39463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37132 - 37103
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaata 30  Q
    ||||||||||||||||||||||||||||||    
T  37132 ttaaggtaagggtgaggtttactttcaata 37103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 46045 - 46109
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| ||    |||||| ||| ||||| || |||||||||||||||||||||||    
T  46045 tgttagaaataggttatgaggacatacatcatctcatttcatatctgtaaactaatttggggagt 46109  T

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Target: scaffold0106; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 50318 - 50382
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| ||    |||||| ||| ||||| || |||||||||||||||||||||||    
T  50318 tgttagaaataggttatgaggacatacatcatctcatttcatatctgtaaactaatttggggagt 50382  T

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Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 29199 - 29260
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  29199 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 29260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 34600 - 34661
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    ||||||||||||||| ||||||||||||| | |||| || |||||| |||||| ||||||||    
T  34600 taaggtaagggtgagatttactttcaatagtatagattgtaattctgattttgatttaacat 34661  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 21062 - 21005
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaattt 205  Q
    |||||||||| |||||||  |||||||||| ||||||| || ||||||||||||||||    
T  21062 tgttagaaatgggttctgagtgcatacaacctttcatttcatatctgtaaactaattt 21005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 14904 - 14843
Alignment:
Q  151 tagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||| |||||||  |||||| ||| ||||||| || |||||||||||||||||||||||    
T  14904 tagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactaatttggggagt 14843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 25109 - 25044
Alignment:
Q  147 gtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||| |||||||  |||||| ||| | ||||| || |||||||||||||||||||||||    
T  25109 gtgttagaaatgggttctgagtgcatataacctatcattgcatatctgtaaactaatttggggagt 25044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 3029 - 2957
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| | ||||||||| |||||||  ||   ||| ||||||||| ||||||||||||||||||||||||||    
T  3029 tgttttggggttagaaatgggttctgagtgtgaacagcatttcatttcacatctgtaaactaatttggggagt 2957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 8365 - 8301
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  8365 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 8301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 1282 - 1354
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||| |||||||  ||  |||| ||||||||| || | |||||||||||||||||||||    
T  1282 tgttttagagttagaaatgggttctgagtgtgtacatcatttcatttcataactgtaaactaatttggggagt 1354  T

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Target: scaffold0331 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 19389 - 19325
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||||||||||||||||| ||  ||   |||||||||||||| |||||||||    
T  19389 tgttagaattaggttctggttgcatacaacacttagttttgcatctgtaaactaaattggggagt 19325  T

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Target: scaffold0243 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 11611 - 11683
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| | |||||||||||||||||  ||   ||| ||||||||| || |||||||||||||||||||||||    
T  11611 tgttttggggttagaaataggttctgagtgtgaacagcatttcatttcatatctgtaaactaatttggggagt 11683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 13775 - 13839
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  13775 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 13839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 2184 - 2120
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| |||||||| ||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  2184 tgttagaattaggttctagttgcatacaacacttagttttgcatctgtaaactaatttggggagt 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 45091 - 45019
Alignment:
Q  140 tgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||| | ||||||||| |||||||  ||   ||| ||||||||| ||||||||||||||||||||||||||    
T  45091 tgttttggggttagaaatgggttctgagtgtgaacagcatttcatttcacatctgtaaactaatttggggagt 45019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16722 - 16786
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||||| || ||  ||   ||||||||||||||||||||||||    
T  16722 tgttagaattaggttctggttgcatacatcacttagttttgcatctgtaaactaatttggggagt 16786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 37954 - 38018
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| | ||||||||||    
T  37954 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccattttggggagt 38018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 136014 - 136078
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||||||  |||||||||||  | ||| ||||||||||||| | ||||||||||    
T  136014 tgttagaaataggttctgagtgcatacaacaagttatttcacatctgtaaaccattttggggagt 136078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 15854 - 15759
Alignment:
Q  111 tttttgggtggattgagggtagaaacctttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttg 206  Q
    |||||||||| |||||| |||| || |  || |||  ||||||||||||||||||  ||||||||||||| |||  || ||||||||||| |||||    
T  15854 tttttgggtgaattgagtgtaggaatcactggtttgatgttagaaataggttctgagtgcatacaacattccatctcatatctgtaaactgatttg 15759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 1221 - 1148
Alignment:
Q  139 ttgttttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||  |||||||||| |||||||  |||||||| | ||||||| |  |||| ||||||||||||||||||    
T  1221 ttgttttgatgttagaaatgggttctgagtgcatacagcctttcatttcgtatctataaactaatttggggagt 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 9846 - 9907
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||  |||||||||||||| | |||| || |||||| |||||| ||||||||    
T  9846 taaggtaagggtgctgtttactttcaatagtatagattgtaattctgattttgatttaacat 9907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6140 - 6193
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttg 54  Q
    ||||||||||||||||||||||| |||||| | |||| | || |||||||||||    
T  6140 ttaaggtaagggtgaggtttactctcaatagtatagattaaagttctaattttg 6193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 4179 - 4248
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattct-aattttggtttaacatagttctg 70  Q
    ||||||||||||||||||||||||||||| | | || |  |||||| | |||||||||||| ||||||||    
T  4179 taaggtaagggtgaggtttactttcaatagtatggattttaattctgatttttggtttaacctagttctg 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 3461 - 3400
Alignment:
Q  2 taaggtaagggtgaggtttactttcaataatgtagaatgaaattctaattttggtttaacat 63  Q
    |||||||||||||  |||||||||||||| | |||| || |||||| |||||| ||||||||    
T  3461 taaggtaagggtgctgtttactttcaatagtatagattgtaattctgattttgatttaacat 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 1208 - 1237
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaata 30  Q
    ||||||||||||||||||||||||||||||    
T  1208 ttaaggtaagggtgaggtttactttcaata 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 37 - 105
Alignment:
Q  144 ttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    ||||||||||||||| |||| ||||| | |||| | || ||||||| ||||||||||  ||||||||||    
T  37 ttagtgttagaaatatgttcaggttgtagacaaaactttattacacttctgtaaactgttttggggagt 105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2867 - 2903
Alignment:
Q  1 ttaaggtaagggtgaggtttactttcaataatgtaga 37  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  2867 ttaaggtaagggtgaggtttactctcaatagtgtaga 2903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 13847 - 13914
Alignment:
Q  144 ttagtgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||| |||||||  |||||| ||| ||||||| || ||||||||| | |||||||||||    
T  13847 ttagtgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaa-tgatttggggagt 13914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 15288 - 15224
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||||||  |||||| ||| ||||||| || ||||||||| | |||||||||||    
T  15288 tgttagaaatgggttctgagtgcatataacctttcattgcatatctgtaaattgatttggggagt 15224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 14245 - 14309
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||||||||||  ||||||||| |||||  ||  |||| |||||||| |||||||||||    
T  14245 tgttagaaataggttctcattgcatacagcatttagttttacatttgtaaactgatttggggagt 14309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 8019 - 7955
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| | ||||||||||||||| ||   ||||||   ||||||||||||||||||||||||    
T  8019 tgttagaattgggttctggttgcatagaaacattcatttttcatctgtaaactaatttggggagt 7955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 6059 - 6123
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| |||| ||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  6059 tgttagaaatgggttatgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 6123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 50248 - 50312
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||||| | |||||  |||||| ||| ||||||| || ||||||||||| |||||||||||    
T  50248 tgttagaaatggattctgagtgcatataacctttcattgcatatctgtaaactgatttggggagt 50312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 321956 - 321892
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||||| || ||  ||   |||||||||||| |||||||||||    
T  321956 tgttagaattaggttctggttgcatacagcacttagtttagcatctgtaaactgatttggggagt 321892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 327644 - 327580
Alignment:
Q  148 tgttagaaataggttctggttgcatacaacatttcattacacatctgtaaactaatttggggagt 212  Q
    |||||||| ||||||||||||||||||| || ||  ||   |||||||||||| |||||||||||    
T  327644 tgttagaattaggttctggttgcatacagcacttagtttagcatctgtaaactgatttggggagt 327580  T

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