View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7125_high_2 (Length: 458)
Name: NF7125_high_2
Description: NF7125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7125_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 159 - 423
Target Start/End: Original strand, 8148115 - 8148380
Alignment:
| Q |
159 |
aaataatacattaattgtattatatatggaagggccgataacattctagtacataacgacgccattttctaatgagttaaaaataataagctgtgacaaa |
258 |
Q |
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| T |
8148115 |
aaataatacattaattgtattatatatggaagggccgataacattctagtacataacgacgccattttctaatgagttaaaaataataagctgtgacaaa |
8148214 |
T |
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| Q |
259 |
ggaa--------acacatagcacaaaggagtatacggttgttagcaaaaaagaaaggagtatacggttaaaattaagatgtgacaattacctccaagaaa |
350 |
Q |
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| T |
8148215 |
ggaataacaaatacacatagcacaaaggagtatacggttgttagcaaaaaagaaaggagtatacgattaaaattaagatgtgacaattacccccaaaaaa |
8148314 |
T |
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| Q |
351 |
agtacaagagcataatttattttcattaataatcgatgaacgatgatcatacattgctccgtgtaaaacaaaa |
423 |
Q |
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| T |
8148315 |
agtacaagagcataatttattttcattaataat-------tgatgatcatacattgctccgtctaaaacaaaa |
8148380 |
T |
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