View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7126_high_3 (Length: 725)
Name: NF7126_high_3
Description: NF7126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7126_high_3 |
 | |
|
| [»] scaffold0038 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 497; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Complemental strand, 26951006 - 26950313
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26951006 |
acttctaaagctaatggaaggccagcagcatatttaactgcacggtttaaaatactatcataccttgaatcatttttgttacttttaaaagccatcattc |
26950907 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
26950906 |
ttaacaattcaagagcttgttccttatttaaaccatctgcttcatatatttttttaatcccatgacatgataacaaatgtttgtcacgagtggtaatgat |
26950807 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |
|
|
| T |
26950806 |
gactctgctgccacgaccaagccaaccaggctctccaatcaaaacctgcaattgctttattttgtcaacatcatcgagaatcaacaaaactttcttctga |
26950707 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| | |||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26950706 |
tatagccttcgttttatgattggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttggagaggagctgctcttggagatactcta |
26950607 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26950606 |
agccatgttttactgaattttctctcacattgtgaagaaaacatttgcattcaaattgattagcaatcaagttataaactgcttgagcaagtgttgtctt |
26950507 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||| | || ||||| ||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26950506 |
tcccattcccccagttccaaggattcctatcatgcagactccatcgtttgatcccaactctgaaagtgaattcacttctgatattcgagatttgagtcca |
26950407 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26950406 |
acaaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
26950313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Complemental strand, 26636909 - 26636216
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
26636909 |
acttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatgtaatcatagcttgaatcatttttcttacttttaaaagcctttgttc |
26636810 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||| || | |||||||||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
26636809 |
ttaacaattcaagagcttgttccttatttaaaccatatgcttcgtaaaaaaatttaatcccatgagatgataacaattgtttgtctcgagtggtgatgat |
26636710 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
||||||||||||||||||||||||| || || |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||| | |
|
|
| T |
26636709 |
tactctgctgccacgaccaagccaaccagcctgtccgatcaaaacctgcaattgctttattttgtcaacgtcatcgagaatcaacaaatctttcttctaa |
26636610 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| | |||| ||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26636609 |
tatagccttcgttttatgactggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttggagaggatctgctcttggagatactcta |
26636510 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||| |
|
|
| T |
26636509 |
agccatgtttaactgaattttctctcacattgtgaaggaaacacaaacattcaaattgattagaaatcaaattataaattgcttgagcaagttttgtctt |
26636410 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26636409 |
gcccattccttcggttccaaggattcctattatgcagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
26636310 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26636309 |
acaaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcacgttcatattcatttc |
26636216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Complemental strand, 26742875 - 26742182
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
26742875 |
acttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatgtaatcatagcttgaatcatttttcttacttttaaaagcctttgttc |
26742776 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||| || | |||||||||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
26742775 |
ttaacaattcaagagcttgttccttatttaaaccatatgcttcgtaaaaaaatttaatcccatgagatgataacaattgtttgtctcgagtggtgatgat |
26742676 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
||||||||||||||||||||||||| || || |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||| | |
|
|
| T |
26742675 |
tactctgctgccacgaccaagccaaccagcctgtccgatcaaaacctgcaattgctttattttgtcaacgtcatcgagaatcaacaaatctttcttctaa |
26742576 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| | |||| ||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26742575 |
tatagccttcgttttatgactggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttggagaggatctgctcttggagatactcta |
26742476 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||| |
|
|
| T |
26742475 |
agccatgtttaactgaattttctctcacattgtgaaggaaacacaaacattcaaattgattagaaatcaaattataaattgcttgagcaagttttgtctt |
26742376 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26742375 |
gcccattccttcggttccaaggattcctattatgcagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
26742276 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26742275 |
acaaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcacgttcatattcatttc |
26742182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 103 - 712
Target Start/End: Complemental strand, 26976130 - 26975521
Alignment:
| Q |
103 |
ttaaaagccatctttcttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgt |
202 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||| |||||||||||| ||||||| |||| ||||| ||||| ||||| ||| ||||||| |
|
|
| T |
26976130 |
ttaaaagccacctttcttaacaattcaagagcttcttctttatttaaaccacctgcttcgtatatcttttcaatccgatgacctgatagcaattgtttgt |
26976031 |
T |
|
| Q |
203 |
ctcgagtagtaatgatgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaa |
302 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
26976030 |
ctcgagtggtaatgatgactctgctgccatgaccaagccaaccaggctctccgatcaaaacctgcaattgctttattttgtcaatgtcatcgagaatcaa |
26975931 |
T |
|
| Q |
303 |
caaaacttttttctgacacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgc |
402 |
Q |
| |
|
||||||||| |||||| | | |||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||| |
|
|
| T |
26975930 |
caaaactttcttctgatatagccttcgttttatgattggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttggagaggagttgc |
26975831 |
T |
|
| Q |
403 |
tcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgctt |
502 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26975830 |
tcttggagatactctaagccatgtttaactgaattttctctcacatcgtgaaggaaacagttacattcaaattgattagcaatcaaattataaactgctt |
26975731 |
T |
|
| Q |
503 |
gagcaagtgttgtcttacccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatat |
602 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||| |
|
|
| T |
26975730 |
gagcaagtgttgtcttacccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagtagtgagttcacttttaatat |
26975631 |
T |
|
| Q |
603 |
tcgagatttgagtccaactaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttca |
702 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26975630 |
tcgagatttgagtccaacaaggtaatcagcaacatgtaaaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcacgttca |
26975531 |
T |
|
| Q |
703 |
tattcatttc |
712 |
Q |
| |
|
|||||||||| |
|
|
| T |
26975530 |
tattcatttc |
26975521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Complemental strand, 26960388 - 26959696
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
26960388 |
acttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatgtaatcatagcttgaatcatttttcttacttttaaaagcctttgttc |
26960289 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnn-aatcccatgacatgataacaaatgtttgtctcgagtagtaatga |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||| |||||||||| ||| ||||||| |
|
|
| T |
26960288 |
ttaacaattcaagagcttgttccttatttaaaccatatgcttcgtatattttttttaatcccatgagatgataacaattgtttgtctctagtggtaatga |
26960189 |
T |
|
| Q |
218 |
tgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctg |
317 |
Q |
| |
|
| ||||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||||||| ||||| |
|
|
| T |
26960188 |
ttactctgctgtcacgaccaagccaactagcctctccgatcaaaacctgcacttgctttattttgtcaacgtcatcgacaatcaacaaaactttcttctg |
26960089 |
T |
|
| Q |
318 |
acacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactct |
417 |
Q |
| |
|
| | | |||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
26960088 |
atatagccttcgttttatgattggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttggagaggatc--ctcttggagatactct |
26959991 |
T |
|
| Q |
418 |
aagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtct |
517 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
26959990 |
aagccatgtttaactgaattttctctcacattgtgaaggaaacacttaaattcaaattgatgaacaatcgaattataaactgcttgagaaagtgttgtct |
26959891 |
T |
|
| Q |
518 |
tacccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcc |
617 |
Q |
| |
|
| |||||||| |||||||||||||||||||| ||| |||||||||| | || ||||| ||| |||||| ||||||| |||||||||||||||||| || |
|
|
| T |
26959890 |
ttcccattcctccagttccaaggattcctatcatgcagactccatcgtttgatcccaactctgaaagtgaattcacttttgatattcgagatttgagacc |
26959791 |
T |
|
| Q |
618 |
aactaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
||| ||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
26959790 |
aacaaggtaatcagcaacatgtaaaggaacatggttaatcttgttggagacgtctgtaactattttttcaataaaatcacgttcatactcatttc |
26959696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Complemental strand, 25075130 - 25074440
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
25075130 |
acttctaaagctaatggaaggccagaagcatatttaattgcacggtttaaaatgtaatcatagcttgaatcattttttttacttttaaaagcctttgttc |
25075031 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
25075030 |
ttaacaattcaagagcttgttccttatttaaaccatatgcttcgtatatttttgtaatcccatgagatgataacaaatgtttgtctcgagtggtaatgat |
25074931 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||| |||||||| ||||| |||||||||||||||||| || ||| |
|
|
| T |
25074930 |
gactctgctgccacgaccgagccagctaggctctccgaccaaaacctgcaattgctttagtttgtcaatgtcatcgagaatcaacaaaactttcttttga |
25074831 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
|| | |||| | |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
25074830 |
catagccttcgctttatgattggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttaaagagaagctgctcttgaagatactcta |
25074731 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| |
|
|
| T |
25074730 |
agccatgttgaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcaaattataaattgcttgagcaagagttgtctt |
25074631 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| | ||||||| || | ||||||||||||||||| ||||||||||| ||||||||| || ||| |
|
|
| T |
25074630 |
gcccattccaccagttccaacgattcctattatgcatactccat---tatatcccaagtctagaagtgaattcacttctgaaattcgagatcgaagacca |
25074534 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
|| |||||||||| |||||||| ||||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
25074533 |
acaaggtaatcagtaacatgtaaaggaatttggttaatcttgttggagacgtctctaactattttttcaataaaatcacgttcatattcatttc |
25074440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Complemental strand, 26849975 - 26849282
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||| |||||||| | ||||||||||| |||| ||||||||| |||||||| | || ||| |
|
|
| T |
26849975 |
acttctaaagctaatggaaggccagaagcatatttaactgcacgatttaaaatgtaatcatagcttgcatcagttttgttacatttaaaagtcttcgttc |
26849876 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| |||||| |||| ||| |||||| ||||||||||| |||||||||||| |||||||| |
|
|
| T |
26849875 |
ttaccaattcaagagcttgttccttgtttaaaccatatgcttcgtatatttttttaattccatgagatgataacaaacatttgtctcgagtggtaatgat |
26849776 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
||||||||| ||| |||||||||||| ||||||||||| |||| | ||| || |||| ||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
26849775 |
gactctgctaccatgaccaagccaaccaggctctccgaccaaattctccaactgatttagtttgtcaacatcattgagaatcaacaaaactttcttctga |
26849676 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| | |||| ||||||||| |||||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26849675 |
gatagccttcgttttatgactggaattccttcattaacatgtccaaacttagtttcaaatctgattgatttggagaggagctgctcttggagaaactcta |
26849576 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
26849575 |
agccatgtttaagtgaattttctctcacatcgtgaaggaaacacttacattcaaattgatcagcaatcgaattataaactgcttgagcaagtgttgtttt |
26849476 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
|||||||| ||||||||||||||||||||| | ||||||||||| |||| |||| ||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
26849475 |
tcccattcctccagttccaaggattcctattttccagactccatcattagattccaattctagaagtgaattcacttctgatattcgagatttaagtcca |
26849376 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
|| ||||||||||||||||| | |||||| ||||||||||||| |||||| || |||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
26849375 |
acaaggtaatcagcaacatgcaaaggaacatggttgatcttgttggagacatccttaactattttcccaataaaatggtgttcatattcatttc |
26849282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 19 - 692
Target Start/End: Original strand, 27664133 - 27664797
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
27664133 |
acttttaaagctaatggaaggccagaagcatattcaactgcacggtttaaaatataatcatagctggaatcattttt---------aaaagtcatctttc |
27664223 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| ||||||||||| || |||||||||||||| |||||||| |||| |||||||| ||||||||||||| | |||||||||| |||||||| |
|
|
| T |
27664224 |
ttaacaattcaagagattcttccttatttaaactgtctgcttcgtatatttttgttatcccatggcatgataacaaatatctgtctcgagtggtaatgat |
27664323 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
||||||||| || |||| | ||||| ||||||||||| ||| | ||| || ||| |||||||||||||| ||||||||||||||||| ||| || |
|
|
| T |
27664324 |
gactctgcttccttgaccgaaccaaccaggctctccgaccaatttctccaactgatttggtttgtcaacgtcatcaagaatcaacaaaactttcttccga |
27664423 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
|| | |||||||||||||||| ||||||||||||| ||||| ||| | | || | ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
27664424 |
catagcctttgttttatgatttcaattccttcattatcatgttctagcggggtgtcatatccgattgatttggagaggagctgctcttggagatacttta |
27664523 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
||| || ||||| |||||||||||| ||||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||| |
|
|
| T |
27664524 |
agctatgtttaaatgaattttctctaacattgtaaaggaaacacctacattcaaattgattaacaattgaattataaactgcttcagcaagtgttgtctt |
27664623 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
||||| || |||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
27664624 |
acccagacctccagttccaaggattcctattatgtagactccatcggtacatcccaagtctagaagtgaattcacttctgatattcgagattcgagtcca |
27664723 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaa |
692 |
Q |
| |
|
|| ||||| ||||||||||||| | || |||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
27664724 |
acaaggtactcagcaacatgtaaatgacaacggttgatcttgttggagacgtctgtaactatttcttcaataaa |
27664797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 176 - 564
Target Start/End: Complemental strand, 31289375 - 31288986
Alignment:
| Q |
176 |
tcccatgacatgataacaaatgtttgtctcgagtagtaatgatgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctt |
275 |
Q |
| |
|
||||||||| ||||| ||| |||||||||| ||| ||||||||||||||||| ||| ||||||||| || ||||||||||| |||| || ||||| || |
|
|
| T |
31289375 |
tcccatgacctgatagcaattgtttgtctcaagtggtaatgatgactctgcttccaggaccaagccgaccaggctctccgaccaaattgttcaatttctc |
31289276 |
T |
|
| Q |
276 |
tattttgtcaacgtcattgagaatcaacaaaacttttttctgacacatcctttg-ttttatgattggaattccttcattaacatgtcctaactgagtttt |
374 |
Q |
| |
|
| |||||| | ||||| |||||||||||| ||||| |||||| | | || || ||||||||||| ||||||||||||||||||||| ||||| ||| |
|
|
| T |
31289275 |
tcgtttgtctatgtcatcgagaatcaacaacactttcttctgagatagcccttcattttatgattgaaattccttcattaacatgtccaaactgtctttc |
31289176 |
T |
|
| Q |
375 |
caatccgattgatttggagaggagctgctcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaat |
474 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31289175 |
aaatccgattgatttggagaggagctgctcttggagatactctaagccatgtttaacagcattttctctcacaatgtgaaggaaacacttacattcaaat |
31289076 |
T |
|
| Q |
475 |
tgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattcccccagttccaaggattcctattatgaagactccatca |
564 |
Q |
| |
|
|||| | |||| |||||||| |||||||| ||||||||| |||||| |||| ||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
31289075 |
tgatcaataatcgaattataaattgcttgagaaagtgttgttttaccccttcctccagttccaagtattcctattatgcagactccatca |
31288986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 19 - 537
Target Start/End: Complemental strand, 26812791 - 26812273
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| | |||| || |||||||| | |||||| ||||||||| || ||||||||||||| ||||||||| |
|
|
| T |
26812791 |
acttctatagctaatggaaggccagaagtatattttactgcgcgatttaaaatgtaatcataacttgaatcaattatgttacttttaaatgccatcttta |
26812692 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
| | |||||||||||||| || | |||||| |||||| ||||| | |||||||||||||||| ||||||| |||||||||| |||||||| |
|
|
| T |
26812691 |
taaacaattcaagagcttctttgtcatttaatccatctaagtcataaattctagttatcccatgacatgatagcaaatgtctgtctcgagtggtaatgat |
26812592 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|||||| || ||| |||| ||||||| ||||||||| | |||||| | |||||||||| ||||||||| |||| |||||||||||||||||| || ||| |
|
|
| T |
26812591 |
gactctacttccaggaccgagccaaccaggctctccaaccaaaaccttcaattgctttggtttgtcaacatcatcgagaatcaacaaaactttcttttga |
26812492 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
|| ||| | |||||||||||||||||||||| |||||||||| || | | || | ||||| || |||||||||||| |||| ||||||| |||| |
|
|
| T |
26812491 |
tgcagcctatcttttatgattggaattccttcactaacatgtccaaaattaaattcctctccgagtgttttggagaggagttgcttctggagatgttcta |
26812392 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||||||||| ||||||||||| |||| |||||||||||||| || |||||||||| |||||||| |||||||| ||| ||| |||||| || || |
|
|
| T |
26812391 |
agccatatttaattgaattttctcgcacactgtgaaggaaacacaaaccatcaaattgatcagcaatcaaattataaagtgcacgagtaagtgtcgtttt |
26812292 |
T |
|
| Q |
519 |
acccattcccccagttcca |
537 |
Q |
| |
|
||||| ||| ||| ||||| |
|
|
| T |
26812291 |
acccaatcctccacttcca |
26812273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 328 - 537
Target Start/End: Complemental strand, 26724522 - 26724313
Alignment:
| Q |
328 |
tgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactctaagccatatt |
427 |
Q |
| |
|
||||||||||||| ||| |||||| |||||| ||| |||| | || |||||||||| ||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
26724522 |
tgttttatgattgaaatcccttcactaacatctccgaacttaaattccaatccgattaatttggagaggagcttctcttggagatattctaagccatatt |
26724423 |
T |
|
| Q |
428 |
taactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattcc |
527 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||||| || |||||||||| ||| |||||| || ||||||| ||| |
|
|
| T |
26724422 |
taattgaattttctctcacattgtgaaggaaacacaacccttcaaattgatcagcaatcaaatcataaactgctcgagtaagtgtcgttttacccaatcc |
26724323 |
T |
|
| Q |
528 |
cccagttcca |
537 |
Q |
| |
|
||| ||||| |
|
|
| T |
26724322 |
tccacttcca |
26724313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 19 - 522
Target Start/End: Complemental strand, 28140798 - 28140295
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| || |||||||||||||||| || ||||| ||||||||| ||| ||| ||||||| ||| || | |
|
|
| T |
28140798 |
acttctaaagccaatggaaggccagaggcataagtaactgcacggtttaaaatgtgctcataacttgaatcaactttattatttttaaatgccttccatt |
28140699 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
| | ||| || ||||||| |||||||||||| |||||| |||||| |||||||||||||| || |||||||||||||||||| |||| || |
|
|
| T |
28140698 |
tcagcaactctagagcttcttccttatttaacccatctagttcataagttctctcaatcccatgacatgctagcaaatgtttgtctcgagttgtaacgac |
28140599 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|| | || ||| ||||||||||| |||| ||||| |||||| | ||| || |||| || |||||||||| ||||||||| | ||| || || | |
|
|
| T |
28140598 |
aacccgactaccatgaccaagccaattagggtctccagccaaaaccttcaactgttttagttcatcaacgtcatcgagaatcaaaagaaccttctttagt |
28140499 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| | ||||| ||||| ||||| ||||||||| | |||||||| |||| | |||| || | || ||| || ||||| | |||||||||| |||| |
|
|
| T |
28140498 |
cgtagcctttcctttattattggtattccttcacttacatgtccaaacttaacgctcaaaccaactgttttagaaaggagtttttcttggagatcttcta |
28140399 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||| ||||| |||||| |||||||||||||| ||||| | |||||||| |||||| ||||||||||| || |
|
|
| T |
28140398 |
agccatgtttagctgaaatttctctcacattatgaagaaaacacaaacattcaaattgatcggcaataaaattataaattgcttgtgcaagtgttgtttt |
28140299 |
T |
|
| Q |
519 |
accc |
522 |
Q |
| |
|
|||| |
|
|
| T |
28140298 |
accc |
28140295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 601 - 711
Target Start/End: Complemental strand, 31288986 - 31288876
Alignment:
| Q |
601 |
attcgagatttgagtccaactaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgtt |
700 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| ||||||| |||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
31288986 |
attcgagatttgagaccaacaaggtaatcagcaacatgtaaaggaacatggttaatcttgttggagacatctgtaactattttttcaataaaatctcgtt |
31288887 |
T |
|
| Q |
701 |
catattcattt |
711 |
Q |
| |
|
||||||||||| |
|
|
| T |
31288886 |
catattcattt |
31288876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 326 - 537
Target Start/End: Original strand, 29843213 - 29843424
Alignment:
| Q |
326 |
tttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactctaagccata |
425 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||| ||||| || | | | ||| | | || |||||| || |||| ||||||||||| ||||||||||| |
|
|
| T |
29843213 |
tttgctttattattggaattccttcattaacatctcctagcttaatgtccaaatcaactgttttggaaagaagcttctcttggagatgctctaagccatg |
29843312 |
T |
|
| Q |
426 |
tttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccatt |
525 |
Q |
| |
|
|||| ||||| |||||||| | | |||||| |||||| ||||||||||| || |||||||| |||||||| |||| ||||||||||||| ||||||| | |
|
|
| T |
29843313 |
tttagctgaactttctctcccgtcgtgaagaaaacacaaacattcaaatttatcagcaatcaaattataaattgctcgagcaagtgttgttttacccaat |
29843412 |
T |
|
| Q |
526 |
cccccagttcca |
537 |
Q |
| |
|
|| ||| ||||| |
|
|
| T |
29843413 |
ccaccaattcca |
29843424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 174 - 537
Target Start/End: Complemental strand, 29827094 - 29826731
Alignment:
| Q |
174 |
aatcccatgacatgataacaaatgtttgtctcgagtagtaatgatgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgc |
273 |
Q |
| |
|
||||||||||| || || |||||||| ||||||||| |||||||| ||| |||||||| |||||| |||| | | |||| || ||| ||||||||| |
|
|
| T |
29827094 |
aatcccatgacttgttagcaaatgttggtctcgagtggtaatgatcactatgctgccaggaccaaaccaatcaagtcctcccgccataacttgcaattgc |
29826995 |
T |
|
| Q |
274 |
tttattttgtcaacgtcattgagaatcaacaaaacttttttctgacacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttt |
373 |
Q |
| |
|
| || ||||||||||| | |||||||| | ||||| || | | | |||||| ||||| |||||||||||||| ||||||| ||||| || ||| | |
|
|
| T |
29826994 |
ctcatgttgtcaacgtcgtcaagaatcaaaagtactttctttcgtcctagcctttgctttattattggaattccttcgttaacatctcctagcttagtgt |
29826895 |
T |
|
| Q |
374 |
tcaatccgattgatttggagaggagctgctcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaa |
473 |
Q |
| |
|
|||| | | || |||||| || |||| || |||||||| |||||||||| |||| ||||| ||||||||| | ||||| |||||| |||||||| |
|
|
| T |
29826894 |
ccaattcaactgttttggaaagaagcttctgttggagatgttctaagccatgtttagctgaactttctctcaagtcatgaagaaaacacaagcattcaaa |
29826795 |
T |
|
| Q |
474 |
ttgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattcccccagttcca |
537 |
Q |
| |
|
|| || | |||||| |||||||| |||| ||||||||||||| ||||||| ||| ||| ||||| |
|
|
| T |
29826794 |
tttatcaccaatcatattataaattgctcgagcaagtgttgttttacccaatccgccaattcca |
29826731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 26938292 - 26938057
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| || || ||||||||||| |||| || || |||| ||| ||||||| ||||| ||||||||| | |
|
|
| T |
26938292 |
acttctaaagctaatggaaggccagaagcgtatttaattgcacggtttattatatcatactaacttggttcaattttgttgcttttgaaagccatccacc |
26938193 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
| | | ||||||||||| ||||| ||||| |||||| || |||||| ||||||||||||||||| |||||||||||||||||| |||| || |
|
|
| T |
26938192 |
taaatagttcaagagcttcttcctcctttaagccatctactacatatattctttcaatcccatgacatgatagcaaatgtttgtctcgagtggtaacaat |
26938093 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctcc |
254 |
Q |
| |
|
|||| |||| ||| ||||||||||| |||| ||||| |
|
|
| T |
26938092 |
gactttgcttccatgaccaagccaattaggttctcc |
26938057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 28097748 - 28097864
Alignment:
| Q |
405 |
ttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttga |
504 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||| | ||||||||| |||| |
|
|
| T |
28097748 |
ttggagatgctctaagccatgttttgctgaattttctctcacattgtgaaggaaacagacacattcaaattgaccagcaatgaaattataaaccgctttt |
28097847 |
T |
|
| Q |
505 |
gcaagtgttgtcttacc |
521 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
28097848 |
gcaagtgttgtcttacc |
28097864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 415 - 537
Target Start/End: Complemental strand, 26618506 - 26618385
Alignment:
| Q |
415 |
tctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttg |
514 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| || |||||||||| ||| |||||| | |
|
|
| T |
26618506 |
tctaagccatatttaattgaattt-ctctcacattgtgaaggaaacacaacccttcaaattgatcagcaatcaaatcataaactgctcgagtaagtgtcg |
26618408 |
T |
|
| Q |
515 |
tcttacccattcccccagttcca |
537 |
Q |
| |
|
| ||||||| ||| ||| ||||| |
|
|
| T |
26618407 |
ttttacccaatcctccacttcca |
26618385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 328 - 430
Target Start/End: Complemental strand, 26618611 - 26618509
Alignment:
| Q |
328 |
tgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactctaagccatatt |
427 |
Q |
| |
|
||||||||||||| ||| |||||| |||||| ||| |||| | || |||||||||| ||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
26618611 |
tgttttatgattgaaatcccttcactaacatctccgaacttaaattccaatccgattaatttggagaggagcttctcttggagatattctaagccatatt |
26618512 |
T |
|
| Q |
428 |
taa |
430 |
Q |
| |
|
||| |
|
|
| T |
26618511 |
taa |
26618509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 324 - 533
Target Start/End: Original strand, 28296964 - 28297173
Alignment:
| Q |
324 |
cctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactctaagcca |
423 |
Q |
| |
|
|||||| ||||||||||||||||| || || |||| |||||||| | | |||| | | | ||||||| ||||||| || || |||| |||||| ||| |
|
|
| T |
28296964 |
cctttgctttatgattggaattccctcgttgacatctcctaacttaacgtccaattcaactaatttggaaaggagcttttcctgtagatgctctaaacca |
28297063 |
T |
|
| Q |
424 |
tatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttaccca |
523 |
Q |
| |
|
|||||| |||||||||| || ||||||||||| |||||| || |||||||||| || || ||||||||||||| |||||||||||||| |||| |
|
|
| T |
28297064 |
tatttagctgaattttcccttacattgtgaagaaaacacaaaccatcaaattgatcggctatggaattataaactgctctggcaagtgttgtctttccca |
28297163 |
T |
|
| Q |
524 |
ttcccccagt |
533 |
Q |
| |
|
| || ||||| |
|
|
| T |
28297164 |
tccctccagt |
28297173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 324 - 533
Target Start/End: Complemental strand, 28515109 - 28514900
Alignment:
| Q |
324 |
cctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactctaagcca |
423 |
Q |
| |
|
|||||| ||||||||||||||||| || || |||| |||||||| | | |||| | | | ||||||| ||||||| || || |||| |||||| ||| |
|
|
| T |
28515109 |
cctttgctttatgattggaattccctcgttgacatctcctaacttaacgtccaattcaactaatttggaaaggagcttttcctgtagatgctctaaacca |
28515010 |
T |
|
| Q |
424 |
tatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttaccca |
523 |
Q |
| |
|
|||||| |||||||||| || ||||||||||| |||||| || |||||||||| || || ||||||||||||| |||||||||||||| |||| |
|
|
| T |
28515009 |
tatttagctgaattttcccttacattgtgaagaaaacacaaaccatcaaattgatcggctatggaattataaactgctctggcaagtgttgtctttccca |
28514910 |
T |
|
| Q |
524 |
ttcccccagt |
533 |
Q |
| |
|
| || ||||| |
|
|
| T |
28514909 |
tccctccagt |
28514900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 27576082 - 27576232
Alignment:
| Q |
217 |
atgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttct |
316 |
Q |
| |
|
|||||||| || ||| |||| ||||||| | ||||||| | |||| |||| ||||||| ||||||||| |||| |||||||||||||||||| || |
|
|
| T |
27576082 |
atgactctactaccaggaccgagccaaccaagctctccaaccaaagttcgcaactgctttagtttgtcaacatcatcgagaatcaacaaaactttctttg |
27576181 |
T |
|
| Q |
317 |
gacacatcctttgttttatgattggaattccttcattaacatgtcctaact |
367 |
Q |
| |
|
| | |||||||||||||||||||||||||||| | | ||||||||||| |
|
|
| T |
27576182 |
tatgtagcctttgttttatgattggaattccttcagttatatgtcctaact |
27576232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 330 - 461
Target Start/End: Original strand, 26892820 - 26892951
Alignment:
| Q |
330 |
ttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactctaagccatattta |
429 |
Q |
| |
|
||||||||||| ||||||||||| |||| ||||||| | | |||||||| |||| ||| |||||||||| ||||||||| | ||||| |||| || |
|
|
| T |
26892820 |
ttttatgattgaaattccttcatccacatctcctaacctaatattcaatccaattgtttttgagaggagcttctcttggaggttttctaaaccatgcttt |
26892919 |
T |
|
| Q |
430 |
actgaattttctctcacattgtgaaggaaaca |
461 |
Q |
| |
|
| |||||||||||||| |||||||| ||||| |
|
|
| T |
26892920 |
gcggaattttctctcacgttgtgaagaaaaca |
26892951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 533
Target Start/End: Complemental strand, 28243691 - 28243544
Alignment:
| Q |
386 |
atttggagaggagctgctcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaat |
485 |
Q |
| |
|
||||||| ||||||| || || |||| |||||| ||||||||| ||||||||| || |||| |||||| ||||| ||| |||||||||| ||| || |
|
|
| T |
28243691 |
atttggaaaggagcttttcctgtagatgctctaaaccatatttagttgaattttcccttacatcgtgaagaaaacataaacaatcaaattgatcagctat |
28243592 |
T |
|
| Q |
486 |
cagattataaactgcttgagcaagtgttgtcttacccattcccccagt |
533 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
28243591 |
ggaattataaactgctcttgcaagtgttgtctttcccattccaccagt |
28243544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 409 - 527
Target Start/End: Complemental strand, 28227825 - 28227707
Alignment:
| Q |
409 |
agatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaa |
508 |
Q |
| |
|
|||| |||||| ||||||||| |||||||||| || |||| |||||| |||||| || |||||||||| || || | |||||||||||| |||| |
|
|
| T |
28227825 |
agatgctctaaaccatatttagctgaattttcccttacatcgtgaagaaaacacaaaccatcaaattgatcggctataaaattataaactgcccttgcaa |
28227726 |
T |
|
| Q |
509 |
gtgttgtcttacccattcc |
527 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
28227725 |
gtgttgtctttcccattcc |
28227707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 461
Target Start/End: Complemental strand, 31285645 - 31285380
Alignment:
| Q |
196 |
tgtttgtctcgagtagtaatgatgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattga |
295 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||| || | |||| | | |||| |||| | |||| ||| || || |||||||| |||| || |
|
|
| T |
31285645 |
tgtttgtctcgagtggtaatgatgactctgcttccacggccgaaccaatcaagtcctccagccaaagcatgcagttgattcatattgtcaacatcatcga |
31285546 |
T |
|
| Q |
296 |
gaatcaaca-aaacttttttctgacacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggaga |
394 |
Q |
| |
|
||||||| | || ||| ||||| ||| | ||||| || |||||||||||||| ||| ||||||| |||||| | ||| |||||| |||| ||| | | |
|
|
| T |
31285545 |
gaatcaaaagaatcttctttct-acatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
31285447 |
T |
|
| Q |
395 |
ggagctgctcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaaca |
461 |
Q |
| |
|
|||||| ||||||||||| | ||| || |||| ||||||| |||||||||| ||||| ||||| |
|
|
| T |
31285446 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaaca |
31285380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 26824905 - 26824870
Alignment:
| Q |
196 |
tgtttgtctcgagtagtaatgatgactctgctgcca |
231 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26824905 |
tgtttgtctcgagttgtaatgatgactctgctgcca |
26824870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 538
Target Start/End: Complemental strand, 26143718 - 26143612
Alignment:
| Q |
432 |
tgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattccccca |
531 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||| || ||||||||||| ||||| | |||||||||||||| |||||||||| |||||||| || ||| |
|
|
| T |
26143718 |
tgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
26143619 |
T |
|
| Q |
532 |
gttccaa |
538 |
Q |
| |
|
|| |||| |
|
|
| T |
26143618 |
gtaccaa |
26143612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 431 - 533
Target Start/End: Original strand, 27604035 - 27604137
Alignment:
| Q |
431 |
ctgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattccccc |
530 |
Q |
| |
|
||||||| ||||||||||| | ||| ||||| ||||||||||||| |||||| | |||||||| ||||| |||||||||| ||||||| ||| || |
|
|
| T |
27604035 |
ctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcc |
27604134 |
T |
|
| Q |
531 |
agt |
533 |
Q |
| |
|
||| |
|
|
| T |
27604135 |
agt |
27604137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 26624532 - 26624439
Alignment:
| Q |
21 |
ttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| |||| ||||||||||||||||| | |||||||||||||||| | ||||| | |||| | ||||| |||||||||||||||| |
|
|
| T |
26624532 |
ttctaaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaactttgtcacttttaaaagccatc |
26624439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 26730509 - 26730416
Alignment:
| Q |
21 |
ttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| |||| ||||||||||||||||| | |||||||||||||||| | ||||| | |||| | ||||| |||||||||||||||| |
|
|
| T |
26730509 |
ttctaaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaactttgtcacttttaaaagccatc |
26730416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 533
Target Start/End: Original strand, 27610452 - 27610553
Alignment:
| Q |
432 |
tgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattccccca |
531 |
Q |
| |
|
|||||| ||||||||||| | ||| ||||| ||||||||||||| |||||| | |||||||| ||||| |||||||||| ||||||| ||| ||| |
|
|
| T |
27610452 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcca |
27610551 |
T |
|
| Q |
532 |
gt |
533 |
Q |
| |
|
|| |
|
|
| T |
27610552 |
gt |
27610553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 533
Target Start/End: Original strand, 27717831 - 27717932
Alignment:
| Q |
432 |
tgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattccccca |
531 |
Q |
| |
|
|||||| ||||||||||| | ||| ||||| ||||||||||||| |||||| | |||||||| ||||| |||||||||| ||||||| ||| ||| |
|
|
| T |
27717831 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcca |
27717930 |
T |
|
| Q |
532 |
gt |
533 |
Q |
| |
|
|| |
|
|
| T |
27717931 |
gt |
27717932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 353; Significance: 0; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 19 - 712
Target Start/End: Original strand, 17992134 - 17992827
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| || || ||||||||||||||| | ||| || |||||| ||| ||| | |||||| ||| || | |
|
|
| T |
17992134 |
acttctaaagctaatgggaggccagcagcatatttaactacacggtttaaaatatagttataactagaatcaatttcgttgcctttaaatgccttccacc |
17992233 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
||| || ||||||||||| ||||| |||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
17992234 |
ttaacagttcaagagcttcttcctcatttaatccatctacttcatatattgttttaatcccatgacatgttaacaaatgtttgtctcgagtggtaatgat |
17992333 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| | |||||| ||||||||||||| |||||| | ||||| ||||||||| | |||||| || ||| |
|
|
| T |
17992334 |
gactctgctgccacgaccaagccaaccaggctctccaaccaaaacctgcaattgctttagtttgtcgatgtcatcgagaatcaagagaactttcttttga |
17992433 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
|| | |||||| |||||||||||||| ||||||||||||||||| || | |||| |||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
17992434 |
catagcctttgctttatgattggaataccttcattaacatgtccaaatttagttacaaatccgattgatttggagagaagctgctcttgaagatactcta |
17992533 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
17992534 |
agccatgtttgactgaattttctctcacattgtgaaggaaacacttacattgaaattgattagcaaccaaattataaactgcttgagcaagagttgtctt |
17992633 |
T |
|
| Q |
519 |
acccattcccccagttccaaggattcctattatgaagactccatcagtagaccccaagtctagaagtgagttcacttctgatattcgagatttgagtcca |
618 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| |||| |||||| || | |||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
17992634 |
gcccattccaccagtaccaaggattcctattatgcagacaccatcattatattccaagtctagaagtgaattcacttctgatattcgagatttgagacca |
17992733 |
T |
|
| Q |
619 |
actaggtaatcagcaacatgtagaggaacgtggttgatcttgtaggagacgtctgtaactattttttcaataaaatcgcgttcatattcatttc |
712 |
Q |
| |
|
| |||||||| |||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
17992734 |
ataaggtaatcggcaacatgtaatggaacgtggttaatcttgttggaagtgtctgtaactattttttcaataaaatcacgttcatattcatttc |
17992827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 527
Target Start/End: Complemental strand, 3280922 - 3280414
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||| || |||||||||||||||||||| | |||| ||||||| || || ||||| ||||||| | || ||||||||||||||| || | |
|
|
| T |
3280922 |
acttctaatgccaatggaaggccagaagcataatttactgcgcggtttagaacgtgctcataacttgaattaacttgcttacttttaaaagccttccatg |
3280823 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
| | ||||||||| |||| |||||||||||| ||||| ||||||| ||||||||||| ||||||||| |||||||||||||| |||||||| |
|
|
| T |
3280822 |
taagcaattcaagtgcttcttccttatttaactcatctatttcatatgttagttcaatcccatgacttgataacaagtgtttgtctcgagtggtaatgat |
3280723 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|| || || ||| || || |||| | || |||| || || |||| ||||| | || || |||||||| |||| ||| | ||| |||||| | |
|
|
| T |
3280722 |
caccctactaccaacactaaaccaatcaagccctccagctaagacttgcacctgcttcaattcgttaacgtcatcaagaaccaatagaacctttttccgg |
3280623 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| |||||| ||||||||||||||||| ||| || || |||||||| | | | |||||| | | |||||| || | | || |||||||| ||||| |
|
|
| T |
3280622 |
tgtagcctttgctttatgattggaattccctcactactatctcctaacttaatgtccaatccaacagttttggaaagaaaatccttttggagatgctcta |
3280523 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
3280522 |
gaccatgttttgctgaattttctctcacattgtgaagaaaacatacacattcaaattgattagcaatgaaattataaactgctcttgcaagagttgtctt |
3280423 |
T |
|
| Q |
519 |
acccattcc |
527 |
Q |
| |
|
||||||||| |
|
|
| T |
3280422 |
acccattcc |
3280414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 521
Target Start/End: Complemental strand, 26137151 - 26136649
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatctttc |
118 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||| ||||| ||||| | ||||||||||||||||||| | |
|
|
| T |
26137151 |
acttctaaagctaacggaaggccagaagcatatttaactgcactgtttaaaatataatcataacttgagtcattgtggttacttttaaaagccatccacc |
26137052 |
T |
|
| Q |
119 |
ttatcaattcaagagcttgttccttatttaaaccatctgcttcatatannnnnnnaatcccatgacatgataacaaatgtttgtctcgagtagtaatgat |
218 |
Q |
| |
|
| | |||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
26137051 |
taaacaattcaagagcttcatccttatttaagaaatcgacttcatatattcttttaatcccatgacatgatagcaaatgtttgtctcgggtggtaatgat |
26136952 |
T |
|
| Q |
219 |
gactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattgagaatcaacaaaacttttttctga |
318 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||||| | |||||| ||||| ||||||| ||||||||||||| |||||||||||||| ||| || ||| |
|
|
| T |
26136951 |
gactctactcccaggaccaagccaactaggctctccaaccaaaacctgcaactgctttagcttgtcaacgtcatcgagaatcaacaaaattttcttttga |
26136852 |
T |
|
| Q |
319 |
cacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagaggagctgctcttggagatactcta |
418 |
Q |
| |
|
| ||||| |||||||||||||||||||| | ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26136851 |
tgtagcctttcttttatgattggaattcctttactaacatgtcctaacttaatctccaatccgattgatttggagaggagctgctcttggagatattcta |
26136752 |
T |
|
| Q |
419 |
agccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtctt |
518 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||| | ||||||||||| ||||||| ||||||||||||| ||| ||||||||| || |
|
|
| T |
26136751 |
agccatatttaactgaattttctcgcacattgtgaaggaagcacaatccttcaaattgatccgcaatcaaattataaactgctcgagtaagtgttgtttt |
26136652 |
T |
|
| Q |
519 |
acc |
521 |
Q |
| |
|
||| |
|
|
| T |
26136651 |
acc |
26136649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 28163451 - 28163512
Alignment:
| Q |
175 |
atcccatgacatgataacaaatgtttgtctcgagtagtaatgatgactctgctgccacgacc |
236 |
Q |
| |
|
||||||||||| | || || |||||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
28163451 |
atcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacgacc |
28163512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 196 - 542
Target Start/End: Complemental strand, 16691953 - 16691607
Alignment:
| Q |
196 |
tgtttgtctcgagtagtaatgatgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgctttattttgtcaacgtcattga |
295 |
Q |
| |
|
|||||||||||||| |||||||||||||| || ||| |||||| |||| |||||||| | || ||| |||||||||||| | ||||| |||| || |
|
|
| T |
16691953 |
tgtttgtctcgagtggtaatgatgactctacttccaggaccaaaccaatcgggctctccaaccataacttgcaattgcttttgctcatcaacatcatcga |
16691854 |
T |
|
| Q |
296 |
gaatcaacaaaacttttttctgacacatcctttgttttatgattggaattccttcattaacatgtcctaactgagttttcaatccgattgatttggagag |
395 |
Q |
| |
|
||||||| | ||| ||||| || | |||||||||||| ||||||||||||||| ||||||||||||||| | | | ||||| || | |||||| || |
|
|
| T |
16691853 |
gaatcaaaagaacctttttttgttgtagcctttgttttattattggaattccttcactaacatgtcctaacttaatgtctaatccaatggttttggaaag |
16691754 |
T |
|
| Q |
396 |
gagctgctcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataa |
495 |
Q |
| |
|
|||| ||||| |||| |||||||||| |||| ||||||||||||||| | ||||| |||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
16691753 |
gagcctttcttgaagatgttctaagccatgtttagatgaattttctctcacgtcatgaagaaaacacaaacattcaaattgatcagcaatcaaattataa |
16691654 |
T |
|
| Q |
496 |
actgcttgagcaagtgttgtcttacccattcccccagttccaaggat |
542 |
Q |
| |
|
| |||| ||||||||||||| ||||| ||||| ||| ||||| |||| |
|
|
| T |
16691653 |
attgctcgagcaagtgttgttttaccgattcctccaattccatggat |
16691607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 50
Target Start/End: Complemental strand, 16692130 - 16692099
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcata |
50 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
16692130 |
acttctaaagctaatggaaggccagaagcata |
16692099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 174 - 533
Target Start/End: Original strand, 5090024 - 5090386
Alignment:
| Q |
174 |
aatcccatgacatgataacaaatgtttgtctcgagtagtaatgatgactctgctgccacgaccaagccaactaggctctccgatcaaaacgtgcaattgc |
273 |
Q |
| |
|
||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||| |||||| |||| ||| |||||| |||||| || | ||| |
|
|
| T |
5090024 |
aatcccatgacattttagcaagtgtttgtctcgagtggtaatgatgactctgctgccaagaccaaaccaatcaggttctccggccaaaacctgtagttgt |
5090123 |
T |
|
| Q |
274 |
tttattttgtcaacgtcattgagaatcaacaaaacttt-tttctgacacatcctttgttttatgattggaattccttcattaacatgtcctaactgagtt |
372 |
Q |
| |
|
|| | |||||||| |||| ||||||||| | |||||| ||||| | ||||| ||||||||||||||||| ||| | | || ||| ||| | || |
|
|
| T |
5090124 |
ttcagtttgtcaatatcatcgagaatcaaaagaactttctttct-ttgtagccttttctttatgattggaattccctcactgatatctccaaacctaatt |
5090222 |
T |
|
| Q |
373 |
ttcaatccgattgatttggagaggagc-tgctcttggagatactctaagccat---atttaactgaattttctctcacattgtgaaggaaacacttacat |
468 |
Q |
| |
|
| |||||| |||| ||| | |||| | | ||| || ||||||||||| |||| |||| ||||||||||||||||||| |||| ||||| |||| |
|
|
| T |
5090223 |
tccaatccaattgttttaaaaaggaccttactc-tgaagatactctaaaccatccactttagttgaattttctctcacattgggaagaaaacaaagacat |
5090321 |
T |
|
| Q |
469 |
tcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattcccccagt |
533 |
Q |
| |
|
|||||||||| |||||| | ||| |||| ||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
5090322 |
tcaaattgatgagcaatgaaattgtaaattgcttttccaagtgtggttttacccattcctccagt |
5090386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 18678475 - 18678570
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | ||||||| |||||||| | ||||| |||||| | ||||| |||||||||||||||| |
|
|
| T |
18678475 |
acttctatagctaatggaaggccagaagcatacacaactgcacgttttaaaatctcttcataacttgaaggaactttgtaacttttaaaagccatc |
18678570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 18654392 - 18654487
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| | |||||||||||||||| | ||||| |||||| | ||||| | |||||||||||||| |
|
|
| T |
18654392 |
acttctatagctaatggaaggccagaagcatacgcaactgcacggtttaaaatctcttcataacttgaaggaactttgtaaattttaaaagccatc |
18654487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 18688541 - 18688636
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||| |||||| | ||| | |||||||||||||||| |
|
|
| T |
18688541 |
acttctatagctaatggaaggccagaagcatacacgactgcacggtttaaaatctcttcataacttgaaggaactttataacttttaaaagccatc |
18688636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 18723000 - 18723095
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| | |||| ||||||||||| | ||||| |||||| | ||||| |||||||||||||||| |
|
|
| T |
18723000 |
acttctatagctaatggaaggccagaagcatacgcaactgctcggtttaaaatctcttcataacttgaaggaactttgtaacttttaaaagccatc |
18723095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 18698315 - 18698410
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | ||||| |||| ||||| | ||||| |||||| | ||||| | |||||||||||||| |
|
|
| T |
18698315 |
acttctagagctaatggaaggccagaagcatacacaactgcatggttaaaaatctcttcataacttgaaggaactttgtaatttttaaaagccatc |
18698410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 18730419 - 18730514
Alignment:
| Q |
19 |
acttctaaagctaatggaaggccagaagcatacatagctgcacggtttaaaatatgatcatagcttgaatcatttttgttacttttaaaagccatc |
114 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | ||||| |||| ||||| | ||||| |||||| | ||||| | |||||||||||||| |
|
|
| T |
18730419 |
acttctagagctaatggaaggccagaagcatacacaactgcatggttaaaaatctcttcataacttgaaggaactttgtaatttttaaaagccatc |
18730514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 524
Target Start/End: Original strand, 18698727 - 18698820
Alignment:
| Q |
431 |
ctgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccat |
524 |
Q |
| |
|
||||||| ||||||||||| | ||| ||||| ||||||||||||| |||||| | |||||||| ||||| |||||||||| |||||||| |
|
|
| T |
18698727 |
ctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgctttcgcaagtgttgatttacccat |
18698820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 533
Target Start/End: Complemental strand, 43853 - 43706
Alignment:
| Q |
386 |
atttggagaggagctgctcttggagatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaat |
485 |
Q |
| |
|
||||||| ||||||| || || |||| |||||| ||||||||| ||||||||| || |||| |||||| ||||| ||| |||||||||| ||| || |
|
|
| T |
43853 |
atttggaaaggagcttttcctgtagatgctctaaaccatatttagttgaattttcccttacatcgtgaagaaaacataaacaatcaaattgatcagctat |
43754 |
T |
|
| Q |
486 |
cagattataaactgcttgagcaagtgttgtcttacccattcccccagt |
533 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
43753 |
ggaattataaactgctcttgcaagtgttgtctttcccattccaccagt |
43706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 409 - 527
Target Start/End: Complemental strand, 28323 - 28205
Alignment:
| Q |
409 |
agatactctaagccatatttaactgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaa |
508 |
Q |
| |
|
|||| |||||| ||||||||| |||||||||| || |||| |||||| |||||| || |||||||||| || || | |||||||||||| |||| |
|
|
| T |
28323 |
agatgctctaaaccatatttagctgaattttcccttacatcgtgaagaaaacacaaaccatcaaattgatcggctataaaattataaactgcccttgcaa |
28224 |
T |
|
| Q |
509 |
gtgttgtcttacccattcc |
527 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
28223 |
gtgttgtctttcccattcc |
28205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 29272913 - 29272971
Alignment:
| Q |
175 |
atcccatgacatgataacaaatgtttgtctcgagtagtaatgatgactctgctgccacg |
233 |
Q |
| |
|
||||||||||| | || ||| ||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
29272913 |
atcccatgacaagttagcaagtgtttgtctcgagtagtaatgatgactttgcttccacg |
29272971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 542
Target Start/End: Complemental strand, 31905901 - 31905791
Alignment:
| Q |
432 |
tgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattccccca |
531 |
Q |
| |
|
|||||||||||||||||| | ||| |||||| | |||||| |||| ||||||||||||||||| || ||||||||||||| ||||| || || ||| |
|
|
| T |
31905901 |
tgaattttctctcacattttcaagaaaacacaaagcttcaaagtgatcggcaatcagattataaacagccagagcaagtgttgttttacctatccctcca |
31905802 |
T |
|
| Q |
532 |
gttccaaggat |
542 |
Q |
| |
|
||||| |||| |
|
|
| T |
31905801 |
cttccatggat |
31905791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 35984391 - 35984338
Alignment:
| Q |
190 |
aacaaatgtttgtctcgagtagtaatgatgactctgctgccacgaccaagccaa |
243 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |||||||||||| |||||||||| |
|
|
| T |
35984391 |
aacaaatgtttgtcccgagttgtaatgataactctgctgccagaaccaagccaa |
35984338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 431 - 533
Target Start/End: Original strand, 2870 - 2972
Alignment:
| Q |
431 |
ctgaattttctctcacattgtgaaggaaacacttacattcaaattgattagcaatcagattataaactgcttgagcaagtgttgtcttacccattccccc |
530 |
Q |
| |
|
||||||| ||||||||||| | ||| ||||| ||||||||||||| |||||| | |||||||| ||||| |||||||||| ||||||| ||| || |
|
|
| T |
2870 |
ctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcc |
2969 |
T |
|
| Q |
531 |
agt |
533 |
Q |
| |
|
||| |
|
|
| T |
2970 |
agt |
2972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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