View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7126_high_31 (Length: 211)
Name: NF7126_high_31
Description: NF7126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7126_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 28524089 - 28523890
Alignment:
| Q |
1 |
tgcaagctcctatgagaaaccccaatcacacaaagaagatacacttttgttttaatttgttcttggtgtctttgtgttcacgggtttgactagtactcct |
100 |
Q |
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| T |
28524089 |
tgcaagctcctatgagaaaccccaatcacacaaagaagatacacttttgttttaatttgttcttggtgtctttgtgttcaagggtttgactagtacttct |
28523990 |
T |
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| Q |
101 |
tgtacacgaatgta------ta-aagacatgtttgtacaatgaagttgtacaattttaaaacaatttgaactatttaccggttacaattatgacattact |
193 |
Q |
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| T |
28523989 |
tttacacaaatgtactgttgtatatctcatgtttgtacaatgatgttgtacaattttaaaacaatttgaactatttaacggttacaattatgacattact |
28523890 |
T |
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