View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7126_low_20 (Length: 336)
Name: NF7126_low_20
Description: NF7126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7126_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 18 - 329
Target Start/End: Complemental strand, 35448358 - 35448047
Alignment:
| Q |
18 |
taacttaggtatgttctttacttctattgttaggaccaaattaggaagccacttgcatgatatatgtgttgctatggttcttctattattactatagcat |
117 |
Q |
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| T |
35448358 |
taacttaggtatgttctttacttctattgttaggaccaaattaggaagccacttgcatgatatatgtgttgctatggttcttctattattactatagcat |
35448259 |
T |
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| Q |
118 |
ggtttgtagctttggtaacttgtattggtataatcatgtagagtgcaatttaagctacctgagtttttaattagtttttactacatgaacgaannnnnnn |
217 |
Q |
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| T |
35448258 |
ggtttgtagctttggtaacttgtattggtataatcatgtagagtgcaatttaagctacgtgagtttttaattagtttttactacatgcacgaattttttt |
35448159 |
T |
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| Q |
218 |
aattgtttatcttggctgcaggtttaacaaaatgctagaacagtgttgtacataaaaccataactcatggatgaacacatgctttgatattttaatagtt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35448158 |
aattgtttatcttggctgcaggtttaacaaaatgctagaacagtgttgtacataaaaccataactcatggatgaacacatgctttgatattttaatagtt |
35448059 |
T |
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| Q |
318 |
tgctacctccaa |
329 |
Q |
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|||||||||||| |
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| T |
35448058 |
tgctacctccaa |
35448047 |
T |
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