View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7126_low_32 (Length: 241)
Name: NF7126_low_32
Description: NF7126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7126_low_32 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 35152202 - 35151979
Alignment:
| Q |
18 |
agtctcttgtattgctcaaaagccctttaaatttaatgaattgtagttctcaattacacaaaatctatccgatattacaaatcaatgttggtttttaggt |
117 |
Q |
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| T |
35152202 |
agtctctcgtattgctcaaaagccctttaaatttaacgaattgtagttctcaattacacaaaatctatccgatatttcaaatcaatgttggtttttaggt |
35152103 |
T |
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| Q |
118 |
cggagtgtatttgtcaatcaagttattttagagagttggacaacatgataagcctataatacaatcactgatcactaataattagcagcaataagcaaag |
217 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35152102 |
cggagtgtatttgtcaatcaagttattgtagagagttggacaacatgataaacctataatacaatcactgatcactaataattagcagcaataagcaaag |
35152003 |
T |
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| Q |
218 |
tgttataaaagacaagttgaattt |
241 |
Q |
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|||||||||||||||||||||||| |
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| T |
35152002 |
tgttataaaagacaagttgaattt |
35151979 |
T |
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