View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7128_high_4 (Length: 245)
Name: NF7128_high_4
Description: NF7128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7128_high_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 24523132 - 24523357
Alignment:
| Q |
1 |
taaatgtgttccaatgttatagaatatttgtgttattgaatttggagaaagatatgatttttgataaaatattataacgttttattcatatattcaactc |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24523132 |
taaatgtgttccaatgttatagaatatctgtgttattgaatttggagaaagatatgatttttgataaaatattataacgttttattcatatattcaactc |
24523231 |
T |
|
| Q |
101 |
tacttaatgagataagatttgattgttgttaaatttgaagaaggatgcatcagagatactctaatgaatttagatgtctcatggctacacacaatcatga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
24523232 |
tacttaatgagataagatttgattgttgttaaatttgaagaaggatgcatcagagatactctaaagattttagatgtctcatggctacacacaatcatga |
24523331 |
T |
|
| Q |
201 |
ttcaacctgcatttgacctcgacttt |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
24523332 |
ttcaacctgcatttgacctcgacttt |
24523357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University