View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7133_high_1 (Length: 398)
Name: NF7133_high_1
Description: NF7133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7133_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 19 - 394
Target Start/End: Complemental strand, 40214810 - 40214435
Alignment:
| Q |
19 |
agaatagcaaatatccttttgagttgagggtattatttctttaaattttctgaggataaaaagggttttgaattatttaggtgaattattgaattcaatc |
118 |
Q |
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| T |
40214810 |
agaatagcaaatatccttttgagttgagggtattatttctttaaattttctgaggataaaaagggttttgaattatttaggtgaattattgaattcaatc |
40214711 |
T |
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| Q |
119 |
tactgagtcaatagtcgaaggtgacatatgaaagatgattagaacaagcacaagcataataatcatatctcccttgttattagttttgctttctacatta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
40214710 |
tactgagtcaatagtcgaaggtgacatatgaaagatgattagaacaagcacaagcataataatcatatctccctagttattagttttgctttctacatta |
40214611 |
T |
|
| Q |
219 |
ttaataagttaaaaggtttggtccaaggtcaataatcaaatattaaagtgtgttaagcacttaggttaggtccacttcgtagctagtgacactgaacctt |
318 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
40214610 |
ttaatacgttaaaaggtttggtccaaggtcaataatcaaatattaaagtgtgttaagcacttaggttaggtccacttcgtagctagtgactctgaacctt |
40214511 |
T |
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| Q |
319 |
tttaagcgctttgtttcgttgtgcttttcatttgtgcagccactaagacagcaattgggtattccacctccatact |
394 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40214510 |
tttaagcgctttgtttcgttgtgcttttcatttgtgcagccactaagacagcaattgggtattccacctccatact |
40214435 |
T |
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