View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7134_high_23 (Length: 236)
Name: NF7134_high_23
Description: NF7134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7134_high_23 |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 526097 - 526322
Alignment:
| Q |
1 |
caatcgcaacgtctctctgctgcttccaccatgatcaatctttctcttataataaggtaccattttgtatgaatatgtcattttctgaaatagtgttagg |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
526097 |
caatcgcaacgtctctctgctgcttccaccatgatcaatctttctcttataataaggtaccattttgtatgaatatgtcattttctgaaatagtgttagg |
526196 |
T |
|
| Q |
101 |
atctcaataacatcaaaacttcttatcgaatgtgtgttccagtgtctaacaagagtcacaaaattttattgatattggcgtgtcggtgtccatatcgtgt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |
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|
| T |
526197 |
atctcaataacatcaaaacttcttatcgaatgtgtgttccagtgtctgacaagtgtcacaaaattttattgatattggcgtgttggtgtccatattgtgt |
526296 |
T |
|
| Q |
201 |
attgtttgtgtgcttcttcacaggtt |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
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|
| T |
526297 |
attgtttgtgtgcttcttcacaggtt |
526322 |
T |
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