View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7134_high_4 (Length: 496)
Name: NF7134_high_4
Description: NF7134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7134_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 462; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 34018704 - 34019191
Alignment:
| Q |
1 |
cattcatcaatgacaagaccttcagcagcaactcgaggacctgtctccgcagcaggcttcttccgagcttcaactgcggcatcagcttcagccaactgcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34018704 |
cattcatcaatgacaagaccttcagcagcaactcgaggacctgtctccgcagcaggcttcttccgagcttcaactgcggcatcagcttcagccaactgcc |
34018803 |
T |
|
| Q |
101 |
ttttcagtttttccaaggcctaaaacgaccacatttctattattacacatcaaatatgtaaagcttaattaagacaacttgcaaaaaatttgactcacgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
34018804 |
ttttcagtttttccaaggcctaaaacgaccacatttctattattacacatcaaatatgtaaagcttaattaagacaatttgcaaaaaatttgactcacgg |
34018903 |
T |
|
| Q |
201 |
gacttggccgttctggatctaaaaatacaactcccaagattcgctccactgtaactagatccctttgttcatcaaactgcatgacagaatgccaaagacc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34018904 |
gacttggccgttctggatctaaaaatacaactcccaagattcgctccactgtaactagatccctttgttcatcaaactgcatgacagaatgccaaagacc |
34019003 |
T |
|
| Q |
301 |
aaacttatttactattaattaattgctcaccacgaaaatattgtcaatagcatgaataaataaaacaagcgataatcaacacagcaaaagctgataaaac |
400 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
34019004 |
aaacttatgtactattaattaattgctcaccacgaaaatattgtcaatagcatgaataaataaaacaagcaataatcaacacagcaaaagctgataaaac |
34019103 |
T |
|
| Q |
401 |
cctaaaacatcctgtcgcaattatttatggaccaacaa---ttatacagaatttcgagttctgttttcctagcctatattcacaggtt |
485 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34019104 |
cctaaaacatcctgtcgcaattatttatggaccaacaattcttatacagaatttcgagttctgttttcctagcctatattcacaggtt |
34019191 |
T |
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