View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7134_high_5 (Length: 456)
Name: NF7134_high_5
Description: NF7134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7134_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 1 - 434
Target Start/End: Complemental strand, 34018718 - 34018285
Alignment:
| Q |
1 |
tgtcattgatgaatgggtatgtaaaatgtttaggggttagtttgtgctctttagcgttttcagttaaatatatgttttattacttgagccctaaattgtc |
100 |
Q |
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| T |
34018718 |
tgtcattgatgaatgggtatgtaaaatgtttaggggttagtttgtgctctttagcgttttcagttaaatatatgttttattacttgagccctaaattgtc |
34018619 |
T |
|
| Q |
101 |
tccaaatgtttatagaaagaaagaagggaaaagtacctggctcggcagcaagttcaagcagtagatacagtgtaaagcacaatttgtttttcttgctagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34018618 |
tccaaatgtttatagaaagaaagaagggaaaagtacctggctcggcagcaagttcaagcagtagatacagtgtaaagcacaatttgtttttcttgctagt |
34018519 |
T |
|
| Q |
201 |
gtttttcttcagagaatgataaatcaagatgttattggtgttgatttgtcgccatcaaccttggatgcaattcaagatataacatagtctgttgatataa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34018518 |
gtttttcttcagagaatgataaatcaagatgttattggtgttgatttgtcgccatcaaccttggatgcaattcaagatataacatagtctgttgatataa |
34018419 |
T |
|
| Q |
301 |
ttgtcaaagttcttgttctttggatgaaaagtcatacatgtaaatagtagagtttggttgtttgtaaaataaattctagtcttccctgccatatttgaga |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
34018418 |
ttgtcaaagttcttgttctttggatgaaaagtcatacatgtaaatagtagagtttggttgtttgtaaaataaatgctagtcttccctgccatatttgaga |
34018319 |
T |
|
| Q |
401 |
aataatgctaaaataacatattattcatgaccat |
434 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
34018318 |
aataatgctaaaataacatattattcatgaccat |
34018285 |
T |
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