View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7134_low_4 (Length: 559)

Name: NF7134_low_4
Description: NF7134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7134_low_4
NF7134_low_4
[»] chr6 (59 HSPs)
chr6 (21-272)||(4256151-4256401)
chr6 (356-549)||(4254795-4254995)
chr6 (21-272)||(4259681-4259944)
chr6 (71-272)||(4622547-4622745)
chr6 (71-272)||(4299348-4299548)
chr6 (71-272)||(4461528-4461728)
chr6 (78-260)||(4516733-4516914)
chr6 (71-272)||(4564116-4564316)
chr6 (71-272)||(4613245-4613445)
chr6 (71-272)||(4626356-4626556)
chr6 (71-272)||(4598576-4598776)
chr6 (71-272)||(4602194-4602394)
chr6 (71-269)||(4586041-4586238)
chr6 (356-549)||(4258132-4258326)
chr6 (71-272)||(4579837-4580037)
chr6 (93-272)||(4489882-4490060)
chr6 (93-272)||(4503924-4504102)
chr6 (71-272)||(3172146-3172346)
chr6 (71-272)||(4557530-4557730)
chr6 (71-272)||(4571377-4571577)
chr6 (93-272)||(4470230-4470408)
chr6 (93-272)||(4560932-4561109)
chr6 (71-272)||(4514648-4514848)
chr6 (71-272)||(4617427-4617627)
chr6 (93-269)||(4506284-4506459)
chr6 (93-272)||(4574735-4574913)
chr6 (75-272)||(4266693-4266889)
chr6 (71-272)||(4592636-4592836)
chr6 (93-272)||(4481120-4481298)
chr6 (275-346)||(4255387-4255458)
chr6 (78-260)||(4458006-4458188)
chr6 (277-346)||(4258742-4258811)
chr6 (275-346)||(4623798-4623869)
chr6 (275-348)||(4558616-4558689)
chr6 (71-193)||(4568461-4568580)
chr6 (275-338)||(4612292-4612355)
chr6 (275-338)||(4618792-4618855)
chr6 (277-338)||(4507404-4507465)
chr6 (275-348)||(4572457-4572530)
chr6 (275-349)||(4581505-4581579)
chr6 (275-341)||(4627641-4627707)
chr6 (275-336)||(4603601-4603662)
chr6 (275-342)||(4471405-4471472)
chr6 (291-338)||(4513553-4513600)
chr6 (278-342)||(4265627-4265691)
chr6 (275-338)||(3173494-3173557)
chr6 (275-321)||(4569561-4569607)
chr6 (277-335)||(4587125-4587183)
chr6 (275-344)||(4575946-4576015)
chr6 (278-342)||(4462701-4462765)
chr6 (275-338)||(4565520-4565583)
chr6 (275-338)||(4594501-4594564)
chr6 (278-344)||(4497813-4497879)
chr6 (275-341)||(4517831-4517897)
chr6 (278-342)||(4488767-4488831)
chr6 (289-344)||(4482370-4482425)
chr6 (21-68)||(4585978-4586025)
chr6 (355-502)||(4276622-4276771)
chr6 (294-338)||(4493415-4493459)
[»] chr5 (5 HSPs)
chr5 (356-549)||(24093152-24093345)
chr5 (75-272)||(24103408-24103604)
chr5 (71-152)||(27999745-27999826)
chr5 (278-342)||(24104589-24104653)
chr5 (211-248)||(24106974-24107011)
[»] chr7 (2 HSPs)
chr7 (71-272)||(3086825-3087025)
chr7 (275-348)||(3088236-3088309)
[»] scaffold0288 (2 HSPs)
scaffold0288 (78-272)||(3246-3439)
scaffold0288 (275-338)||(2025-2088)
[»] scaffold0477 (1 HSPs)
scaffold0477 (71-272)||(4213-4413)
[»] chr8 (5 HSPs)
chr8 (71-272)||(1674631-1674831)
chr8 (71-271)||(16685795-16685994)
chr8 (71-260)||(20863382-20863570)
chr8 (275-337)||(1676012-1676074)
chr8 (275-351)||(20862371-20862447)
[»] chr3 (2 HSPs)
chr3 (75-272)||(1281523-1281719)
chr3 (275-338)||(1282924-1282987)
[»] scaffold0475 (2 HSPs)
scaffold0475 (275-344)||(2315-2384)
scaffold0475 (99-145)||(3162-3208)
[»] scaffold0199 (2 HSPs)
scaffold0199 (275-337)||(1249-1311)
scaffold0199 (211-272)||(7-68)


Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 272
Target Start/End: Complemental strand, 4256401 - 4256151
Alignment:
Q  21 gttcagtacttgctcttgcggacaccaacccgcgattggtcctctatccgaaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaa 120  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4256401 gttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaa 4256302  T
Q  121 tgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaa 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4256301 tgatacacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataactgtaatgctgccaaaa-ttcacgtaaa 4256203  T
Q  221 caacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4256202 caacagactcaggttccttggattcaagccattcaagacacttggtatcttc 4256151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 356 - 549
Target Start/End: Complemental strand, 4254995 - 4254795
Alignment:
Q  356 gcttgcaccatcggatcagaaattgattggttgttgcgctactgccttgctctccccttgctgctcattttttgctgtcatggatctgctgccat----- 450  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  4254995 gcttgcaccatcggatcagaaattgattggttgttgcgctactgccttgctctccccttgctgctcattttttgctgtcatggatctgctgccattgcaa 4254896  T
Q  451 --tgcagcaacacattctacttcgtgtgaactgacaagcgcggatgagcttcaacatcgtggttaatgtgccaaagacctgctgtgctccacacaggttc 548  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4254895 tttgcagcaacacattctacttcgtgtgaactgacaagcgcggatgagcttcaacatcgtggttaatgtgccaaagacctgctgtgctccacaccggttc 4254796  T
Q  549 t 549  Q
    |    
T  4254795 t 4254795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 21 - 272
Target Start/End: Complemental strand, 4259944 - 4259681
Alignment:
Q  21 gttcagtacttgctcttgcggacaccaacccgcgattggtcctctatccgaaa-------------ctcagatgacaaaataaaggagccaccaatgacg 107  Q
    ||||||||||||||||||||||||||| | ||||||| | |||||||||||||             |||||||||||||||||||||||||||||| | |    
T  4259944 gttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcagatgacaaaataaaggagccaccaataatg 4259845  T
Q  108 aggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataactgtgatgctgccaa 207  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  4259844 aggtcaggcctaatgatccacaaaaagggtttcttgctattggccaatccccaagcaaactctaaaaattgatctggagtcataactgtaatgctgccaa 4259745  T
Q  208 aatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    || |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  4259744 aa-ttcacgtaaacaacagactcaggttccttaaattcaagccattcaagacatttggtatcttc 4259681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4622547 - 4622745
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    ||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||    
T  4622547 aaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactct 4622646  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    || ||||||||| ||||||| ||||| |||||||||||| ||||||||||||  ||| ||||||||||||||||||||||| |||||||||||| |||||    
T  4622647 aatagttgatctcgagtcatcactgtaatgctgccaaaa-ttcacgtaaaca--agagtcaggttccttggattcaagccactcaagacacttgatatct 4622743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 71 - 272
Target Start/End: Complemental strand, 4299548 - 4299348
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||||||| ||||    
T  4299548 aaactcagatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaatggtttcctgcaattggccaaaccccaagcaatctct 4299449  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||| ||||||||||||||||| | |||||||||| ||||| |||||||| ||  | || |||||||||||||||||||||||||| |||||||||    
T  4299448 aacagttgctctggagtcataactgtaacgctgccaaaa-ttcacataaacaaccgatcccggctccttggattcaagccattcaagacatttggtatct 4299350  T
Q  271 tc 272  Q
    ||    
T  4299349 tc 4299348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4461528 - 4461728
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    ||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||| |||||||||||||  ||||| |||||||||||||||    
T  4461528 aaactcagatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccataaaaagggtttcttgctatcagccaaaccccaagcaaactct 4461627  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    ||||||||||| |||||||||||||||||||||||||||||| || || ||||||||  | ||||| || |||||||||||||||||||| || ||||||    
T  4461628 aacagttgatcaggagtcataactgtgatgctgccaaaattt-acatagacaacagatcctggttcttttgattcaagccattcaagacatttagtatct 4461726  T
Q  271 tc 272  Q
    ||    
T  4461727 tc 4461728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 78 - 260
Target Start/End: Original strand, 4516733 - 4516914
Alignment:
Q  78 gatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagtt 177  Q
    |||||||||||||  |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||    
T  4516733 gatgacaaaataaccgagccaccaatgacaaggtcaggcctaataatccacaaaaaaggtttcttgctgttggccaaaccccaagcgaactctaacagtt 4516832  T
Q  178 gatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagaca 260  Q
    ||||||||||||| || |||||||| |||||| ||||| ||||| |||||  |  ||||||| ||||||||||||||||||||    
T  4516833 gatctggagtcatgaccgtgatgcttccaaaa-ttcacataaactacagaaccttgttccttagattcaagccattcaagaca 4516914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4564116 - 4564316
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||||||  |  |||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||     
T  4564116 aaactcagatgacaaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaagggtttattgcaattggccaacccccaagcaaattcc 4564215  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||| | ||| ||||||||||| ||||| |||||| ||||| |||||||| ||  | || ||||||||||||||||||||||||||||| ||||||    
T  4564216 aacagttgttttggtgtcataactgtaatgcttccaaaa-ttcacataaacaacggatcccggctccttggattcaagccattcaagacacttagtatct 4564314  T
Q  271 tc 272  Q
    ||    
T  4564315 tc 4564316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 71 - 272
Target Start/End: Complemental strand, 4613445 - 4613245
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| ||  ||||| |||||||| || ||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  4613445 aaactctgatgacaaaacaactgagccgccaatgacaagatcaggcctaatgatccacaaaaagggttgcttgctattcgccaaaccccaagcaaactct 4613346  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    || ||||  |||| ||||||||| || ||||| |||||| ||||| |||||||| ||||  |||||||||||||||||||| ||||||||||||||||||    
T  4613345 aatagtttttctgcagtcataacggtcatgctcccaaaa-ttcacataaacaacggacttcggttccttggattcaagccaatcaagacacttggtatct 4613247  T
Q  271 tc 272  Q
    ||    
T  4613246 tc 4613245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4626356 - 4626556
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||| ||||||| ||||||||||| || || ||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||    
T  4626356 aaactcggatgacgaaataaatgagccaccaatcacaagatcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactct 4626455  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||  | ||||||||||||| | | |||||| ||| ||||| |||||||||||||  ||||||||| ||||||||||||||||||| ||||| |||    
T  4626456 aacagtttctgtggagtcataactataacgctgcc-aaagttcacataaacaacagactttggttccttgaattcaagccattcaagacaattggtgtct 4626554  T
Q  271 tc 272  Q
    ||    
T  4626555 tc 4626556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4598576 - 4598776
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| ||  |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||    
T  4598576 aaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaagtct 4598675  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    ||||  |  |||| |||||| || || ||||| |||||| ||||| ||||||||||||   ||||| |||||||||||||| ||||||||||||||||||    
T  4598676 aacaacttttctgcagtcatcaccgttatgctcccaaaa-ttcacataaacaacagaccttggttcattggattcaagccagtcaagacacttggtatct 4598774  T
Q  271 tc 272  Q
    ||    
T  4598775 tc 4598776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4602194 - 4602394
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||||||| |  |||||||||||||| || ||||||||||||||||||||||||||||| | || ||||||||| |||||||| || |||    
T  4602194 aaactcagatgacaaaatcactgagccaccaatgacaagatcaggcctaatgatccacaaaaatggtttatggcaattggccaaaccccaagcgaattct 4602293  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    || | |||||  || ||||||||||| |||||||||||| ||||| |||||||| ||  | || ||||||||||||||||||||||||||||  ||||||    
T  4602294 aataattgatggggtgtcataactgtaatgctgccaaaa-ttcacataaacaacggatcccggctccttggattcaagccattcaagacactcagtatct 4602392  T
Q  271 tc 272  Q
    ||    
T  4602393 tc 4602394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 71 - 269
Target Start/End: Original strand, 4586041 - 4586238
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||||||  ||||| ||||||||||| || ||||| ||||||||||| |||||  ||| ||||||||||||||| |||||||||||||||    
T  4586041 aaactcagatgacaaaaccaaggaaccaccaatgacaagatcaggtctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactct 4586140  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatc 269  Q
    || ||||  |||| ||||||||||||  |||| |||||| ||||| |||||||| |||   |||||||| ||||||||||| |||||||||||||||||    
T  4586141 aatagtttttctgtagtcataactgttgtgctcccaaaa-ttcacataaacaacggacctcggttcctttgattcaagccaatcaagacacttggtatc 4586238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 356 - 549
Target Start/End: Complemental strand, 4258326 - 4258132
Alignment:
Q  356 gcttgcaccatcgga-tcagaaattgattggttgttgcgctactgccttgctctccccttgctgctcattttttgctgtcatggatctgctgccattgca 454  Q
    ||||||||||| ||| |||||  ||||||||||||||||||||||| |||||| |  |||| |||||| |||||||||||| ||||||||||||||||||    
T  4258326 gcttgcaccattggaatcagaccttgattggttgttgcgctactgctttgctcgcgtcttgatgctcactttttgctgtcacggatctgctgccattgca 4258227  T
Q  455 gcaacacattctacttcgtgtgaactgacaagcgcggatgagcttcaacatcgtggttaatgtgccaaagacctgctgtgctccacacaggttct 549  Q
     || ||||| |  | | ||||||||||||| ||  |||||||||||||||||| || |||||||||||||||  |||||||||||||| ||||||    
T  4258226 tcagcacatcccgcgttgtgtgaactgacatgcagggatgagcttcaacatcgcggataatgtgccaaagacacgctgtgctccacaccggttct 4258132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4579837 - 4580037
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| |   ||||| || ||||| || || |||||||||||||||||||| |||| ||||||||| || || ||||| |||||||||    
T  4579837 aaactccgatgacaaaacagctgagccgccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactct 4579936  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||  |||| |||||||||||| | ||| |||||| ||||| ||||||||||||  ||||||||||||||||||||| | ||||||||||||||||    
T  4579937 aacagtttttctgcagtcataactgtcaagctcccaaaa-ttcacataaacaacagacctaggttccttggattcaagccaataaagacacttggtatct 4580035  T
Q  271 tc 272  Q
    ||    
T  4580036 tc 4580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 272
Target Start/End: Complemental strand, 4490060 - 4489882
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    ||||||||||| || || ||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| || |  ||| ||| |||||    
T  4490060 gagccaccaataacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactctaatagcttctctcgagacataa 4489961  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    | |||||||||||||||||| || |||||||||||  | ||||| || |||||||||||||||||||| || ||||||||    
T  4489960 cagtgatgctgccaaaattt-acataaacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttc 4489882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 272
Target Start/End: Complemental strand, 4504102 - 4503924
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    ||||||||||| || || ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||  || |||||    
T  4504102 gagccaccaataacaagatcaggcctaataatccacaaaaaaggtttcttgctattggccaaaccccaagcaaactctaacaatttatcttaagacataa 4504003  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    |||| ||||||||||||||| || |||||||||||  | ||||| ||  |||||||||| |||||||| || ||||||||    
T  4504002 ctgtaatgctgccaaaattt-acataaacaacagatcctggttcttttaattcaagccaatcaagacatttagtatcttc 4503924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 3172146 - 3172346
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| ||  |||||||||||||| || ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||||||||||    
T  3172146 aaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaataatccacaaaaagggtttcttgctgttggctaaaccccaagcaaactct 3172245  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    || | ||  ||| ||| ||||||| ||||||||||||||||| || ||||||||||| |  | ||| || | |||||||||||||||||| || ||||||    
T  3172246 aataatttctcttgagacataactatgatgctgccaaaattt-acataaacaacagattttgattcttttgtttcaagccattcaagacatttagtatct 3172344  T
Q  271 tc 272  Q
    ||    
T  3172345 tc 3172346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4557530 - 4557730
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| ||  |||||||| ||||| || || |||||||||||||||||||| |||| ||||||||| || || ||||| |||||||||    
T  4557530 aaactccgatgacaaaacaactgagccaccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactct 4557629  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||  ||||  ||||||||||| ||||| |||||| ||||| |||||||| |||   ||||||||||||||||||||  ||||||||||| |||||    
T  4557630 aacagtttttctgccgtcataactgtcatgctcccaaaa-ttcacataaacaacggacctcggttccttggattcaagccaaccaagacacttgttatct 4557728  T
Q  271 tc 272  Q
    ||    
T  4557729 tc 4557730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4571377 - 4571577
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| ||  |||||||||||||| || || ||||||||||||||||||||  ||| ||||||||| || || ||||| |||||||||    
T  4571377 aaactccgatgacaaaacaactgagccaccaatgacaagatcgggcctaatgatccacaaaaagagttgcttgctatttgctaaaccccatgcaaactct 4571476  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||  |||| ||||||||||||  |||| |||||| ||||| |||||||| |||   |||||||| ||||||||||| |||||||||||| |||||    
T  4571477 aacagtttttctgaagtcataactgtcctgctcccaaaa-ttcacataaacaacggacctcggttcctttgattcaagccaatcaagacacttgttatct 4571575  T
Q  271 tc 272  Q
    ||    
T  4571576 tc 4571577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 93 - 272
Target Start/End: Original strand, 4470230 - 4470408
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    ||||| |||||||| || || |||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||||  ||||||| |||||    
T  4470230 gagccgccaatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgccaaaccccaagcaaactctaacagtttctctggagacataa 4470329  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    |||||| |||||| |||||| || || ||||||||  | ||||| || ||||||||||| |||||||| || ||||||||    
T  4470330 ctgtgacgctgccgaaattt-acatagacaacagatcctggttcttttgattcaagccactcaagacatttagtatcttc 4470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 93 - 272
Target Start/End: Original strand, 4560932 - 4561109
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||  | |  ||| ||| | |||    
T  4560932 gagccaccaatgacaagatcaggcctaatgatccataaaaatggtttcttgctgttggccaaaccccaagcaaactctaa-ggcttctcttgagacttaa 4561030  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    | |||||||||||||||||| || |||||||||||  | ||||| || |||||||||||||||||||| || ||||||||    
T  4561031 cagtgatgctgccaaaattt-acataaacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttc 4561109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 71 - 272
Target Start/End: Complemental strand, 4514848 - 4514648
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    ||||||||| |||||||  |  |||||||||||||| || ||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||||    
T  4514848 aaactcagacgacaaaaccactgagccaccaatgacaagatcaggcctaatgatccataaaaaggttttcttgctattggccaaaccccaagcaaactct 4514749  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||| ||  || |||| |||||  |||||||| |||||| || || |||||||||||  | | ||| || |||||||||||||||||||| || ||||||    
T  4514748 aacaatttctccggagacataatcgtgatgctaccaaaa-ttaacataaacaacagatcctgattcttttgattcaagccattcaagacatttagtatct 4514650  T
Q  271 tc 272  Q
    ||    
T  4514649 tc 4514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4617427 - 4617627
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||| ||||| |  |||||||||||||| || |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||| ||     
T  4617427 aaactcagatgagaaaatcactgagccaccaatgacaagatcaggccttatgatccacaaaaatgatttcttgcaattggccaaaccccaagcaaattcc 4617526  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |  | ||| || || ||||||||||| |||||||| ||| ||||| |||||||| ||  | || ||||||||||||||||| ||||||||||  ||||||    
T  4617527 agtaattgctcgggtgtcataactgtaatgctgccgaaa-ttcacataaacaactgatcccggctccttggattcaagccaatcaagacactctgtatct 4617625  T
Q  271 tc 272  Q
    ||    
T  4617626 tc 4617627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 93 - 269
Target Start/End: Original strand, 4506284 - 4506459
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    ||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||  || |||| |||||    
T  4506284 gagccaccaattacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaactctaaaaatttctccggagacataa 4506383  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatc 269  Q
     ||||||||| |||||| ||||| |||||||||||  | ||||| || ||||| |||||||| ||||| || |||||    
T  4506384 ttgtgatgcttccaaaa-ttcacataaacaacagaagccggttcttttgattccagccattcgagacatttagtatc 4506459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 93 - 272
Target Start/End: Original strand, 4574735 - 4574913
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||  || |  ||| ||| |||||    
T  4574735 gagccaccaatgacaagatcaggcctaatgatccacaaaaagggttttttgctgttggccaaaccccaagcaaactctacgagcttctctcgagacataa 4574834  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    | |||||||||||||||||| || |||||||||||    ||||| || ||||||| |||||||||||| || ||||||||    
T  4574835 cagtgatgctgccaaaattt-acataaacaacagatcttggttcttttgattcaatccattcaagacatttagtatcttc 4574913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 75 - 272
Target Start/End: Complemental strand, 4266889 - 4266693
Alignment:
Q  75 tcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaaca 174  Q
    ||||||||||||| ||  ||||| |||||||| || ||||||||||| ||||||||||| || |||||||| |||||||| ||||||||||||||||| |    
T  4266889 tcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctgttggccaaaccccaagcaaactctaaga 4266790  T
Q  175 gttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    | |  ||| | | ||||||||||||||| ||||||||| || |||||||||||    ||||| || ||||||||||| |||||||| || ||||||||    
T  4266789 gcttctctcgtgacataactgtgatgctaccaaaattt-acataaacaacagatcttggttcttttgattcaagccactcaagacatttagtatcttc 4266693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 4592636 - 4592836
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||| ||  | |||||||||||| || ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||    
T  4592636 aaactccgatgacaaaacaattgtgccaccaatgacaagatcaggcctaatgatccacaaaaaaggtttattgcaattggccaaaccccaagcaaactct 4592735  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||| ||  |||  | |||||||||| | |||||| ||| ||||| |||||||| ||  | | |||||| ||||||||||||| ||||||||  ||||||    
T  4592736 aacattttctcttcattcataactgtaaggctgccgaaa-ttcacataaacaacggaacccgattccttcgattcaagccatttaagacactcagtatct 4592834  T
Q  271 tc 272  Q
    ||    
T  4592835 tc 4592836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 93 - 272
Target Start/End: Original strand, 4481120 - 4481298
Alignment:
Q  93 gagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttgatctggagtcataa 192  Q
    |||||||||||||| || | || |||||| |||||||||||   ||| ||||||||||| || ||||||||||||||||| ||||  ||| ||| |||||    
T  4481120 gagccaccaatgacaagattagacctaataatccacaaaaagttttttttgctattggcaaaaccccaagcaaactctaagagtttctcttgagacataa 4481219  T
Q  193 ctgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
     ||||||||||||||||||| || |||||||||||  | ||||| || |||||||||||||||||||| || ||||||||    
T  4481220 ttgtgatgctgccaaaattt-acataaacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttc 4481298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 275 - 346
Target Start/End: Complemental strand, 4255458 - 4255387
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttat 346  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4255458 ttgctagtttgaataatagattgatatggccttgaactggatatggaatcaacacagcatgtggcattttat 4255387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 78 - 260
Target Start/End: Original strand, 4458006 - 4458188
Alignment:
Q  78 gatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggttt-cttgctattggccaatccccaagcaaactctaacagt 176  Q
    |||||||||| ||  |||||||||||||| || ||||||||| | ||||||||||| ||||| |||||| ||||||||  |||||||||| ||||| ||     
T  4458006 gatgacaaaacaaccgagccaccaatgacaagatcaggcctagttatccacaaaaaaggttttcttgctgttggccaaaacccaagcaaattctaagagc 4458105  T
Q  177 tgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagaca 260  Q
    |  ||| ||| ||||||||||||||| ||||||||| || |||| ||||||||  ||||| || ||||||||||| ||||||||    
T  4458106 ttctcttgagacataactgtgatgcttccaaaattt-acataaataacagactttggttcttttgattcaagccactcaagaca 4458188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 4258811 - 4258742
Alignment:
Q  277 gctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttat 346  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4258811 gctagtttgaacaatggattgatatggccttgagctggatatggaatcaacacagcatgtggctttttat 4258742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 4623798 - 4623869
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttat 346  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  4623798 ttgctagtttgaacaatggattgatatgaccttgaactggatatgcaatcaacacagcatgtggctttttat 4623869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 4558616 - 4558689
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttatca 348  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4558616 ttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggttttttatca 4558689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 4568461 - 4568580
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||| |||||||||||||  |||||||||||||| || | ||||||||||||||||||||| ||||||||||| ||||| || || ||||  ||||||    
T  4568461 aaactcggatgacaaaataactgagccaccaatgacaagctaaggcctaatgatccacaaaaaaggtttcttgctgttggcaaaacctcaagagaactct 4568560  T
Q  171 aacagttgatctggagtcataac 193  Q
    |||   || ||||||||||||||    
T  4568561 aac---tgctctggagtcataac 4568580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 4612355 - 4612292
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  4612355 ttgctagtttgattaatggattgatatggccttgaactggatatggaattaacactgcatgtgg 4612292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 4618792 - 4618855
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  4618792 ttgctagtttgaacaatggattgatatggccttgaactggatatggaatcatcacaacatgtgg 4618855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 4507404 - 4507465
Alignment:
Q  277 gctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  4507404 gctagtttgaacaatggattgatatggccttgagttggatatggaatcaacacagcatgtgg 4507465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 4572457 - 4572530
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttatca 348  Q
    |||||||||  || |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  4572457 ttgctagttgcaacaatggattgatatggccttgaactggatatgggattaacacagcatgtggttttttatca 4572530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 4581505 - 4581579
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttatcag 349  Q
    |||||||| | | ||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  4581505 ttgctagtgttattaatggagtgatatgtccttgaagtggatatggaatcaacactgcatgtggctttttatcag 4581579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 4627641 - 4627707
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctt 341  Q
    |||||||| | || |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  4627641 ttgctagtatcaacaatggattgatatggccttgaagtggaaatggaatcaacacagcatgtggctt 4627707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 4603601 - 4603662
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgt 336  Q
    |||||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4603601 ttgctagtttcaacattggattgatatggccttgaagtggatatggaatcaacacagcatgt 4603662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 4471405 - 4471472
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttt 342  Q
    |||||||||| || |||| |||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  4471405 ttgctagtttcaacaatgcattgatatggccttgagctggacatggaatcaatacagcatgtggcttt 4471472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 4513600 - 4513553
Alignment:
Q  291 tggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4513600 tggattgatatggccttgaagtggatatggaatcaacacagcatgtgg 4513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 4265691 - 4265627
Alignment:
Q  278 ctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttt 342  Q
    |||| ||||| |||| ||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  4265691 ctagattgaacaatgcattgatatggccttgaaatggagctggaatcaacacagcatgtggcttt 4265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 3173494 - 3173557
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    |||||||||| || |||| |||||||||||||||||||||||||||| | ||||| ||||||||    
T  3173494 ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtgg 3173557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 4569561 - 4569607
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatgga 321  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  4569561 ttgctagtttcaataatggattgatatggccttgaagtggatatgga 4569607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 277 - 335
Target Start/End: Original strand, 4587125 - 4587183
Alignment:
Q  277 gctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatg 335  Q
    |||||||| || ||||||||||||||||||||||||||| |||| || |||||||||||    
T  4587125 gctagtttcaacaatggattgatatggccttgaactggagatgggattaacacagcatg 4587183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 4575946 - 4576015
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttttt 344  Q
    |||||| ||| || |||| |||||||||||||||||||||| ||||| | ||||| ||||||||||||||    
T  4575946 ttgctattttcaacaatgcattgatatggccttgaactggaaatggagttaacactgcatgtggcttttt 4576015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 4462701 - 4462765
Alignment:
Q  278 ctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttt 342  Q
    ||||||| || |||| |||||||||||||||   |||| ||||||||||||||||||||||||||    
T  4462701 ctagtttcaacaatgcattgatatggccttgggatggacatggaatcaacacagcatgtggcttt 4462765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 4565520 - 4565583
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    |||| |||||||| |||||||| ||||| ||||||| ||||  |||||||||||||||||||||    
T  4565520 ttgcaagtttgaacaatggatttatatgtccttgaaatggagctggaatcaacacagcatgtgg 4565583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 4594501 - 4594564
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    |||| |||||||| |||||||| ||||| ||||||| ||||  |||||||||||||||||||||    
T  4594501 ttgcaagtttgaacaatggatttatatgtccttgaagtggagctggaatcaacacagcatgtgg 4594564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 4497879 - 4497813
Alignment:
Q  278 ctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttttt 344  Q
    ||||||| || ||||||||||||||||||| || |||| ||||| | ||||| ||||||||||||||    
T  4497879 ctagtttcaacaatggattgatatggccttaaattggaaatggagttaacactgcatgtggcttttt 4497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 4517831 - 4517897
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctt 341  Q
    |||||||||| || || ||||||||||||||||||| |||||||||| | | ||| |||||||||||    
T  4517831 ttgctagttttaacaacggattgatatggccttgaagtggatatggagttatcactgcatgtggctt 4517897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 4488831 - 4488767
Alignment:
Q  278 ctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttt 342  Q
    ||||||| || |||| |||||||||||||||||||||| ||||  | ||||| ||||||||||||    
T  4488831 ctagtttcaacaatgcattgatatggccttgaactggaaatggtgttaacactgcatgtggcttt 4488767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 4482370 - 4482425
Alignment:
Q  289 aatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttttt 344  Q
    |||| |||||||||||||||| ||||| ||||| ||||||| |||||||| |||||    
T  4482370 aatgcattgatatggccttgagctggaaatggagtcaacactgcatgtggtttttt 4482425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 4585978 - 4586025
Alignment:
Q  21 gttcagtacttgctcttgcggacaccaacccgcgattggtcctctatc 68  Q
    ||||| ||||||||||||||| ||||||||||||||| | ||||||||    
T  4585978 gttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatc 4586025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 502
Target Start/End: Complemental strand, 4276771 - 4276622
Alignment:
Q  355 ggcttgcaccatcggatcagaaattgatt--ggttgttgcgctactgccttgctctccccttgctgctcattttttgctgtcatggatctgctgccattg 452  Q
    |||||||||||||| | ||||  ||||||  ||||||||  ||||| |||||||| ||||||  |||||  ||||| ||||||  |  ||||| || ||     
T  4276771 ggcttgcaccatcgaaccagaccttgattttggttgttgttctacttccttgctcgcccctttatgctcgcttttttctgtcacagtactgcttccctta 4276672  T
Q  453 cagcaacacattctacttcgtgtgaactgacaagcgcggatgagcttcaa 502  Q
    |||||||| || || | ||||||||||| ||| ||||||||||| |||||    
T  4276671 cagcaacatatcctgcgtcgtgtgaacttacatgcgcggatgagtttcaa 4276622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 4493415 - 4493459
Alignment:
Q  294 attgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    ||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  4493415 attgatatgaccttgagctggaaatggaatcaacactgcatgtgg 4493459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 356 - 549
Target Start/End: Original strand, 24093152 - 24093345
Alignment:
Q  356 gcttgcaccatcggatcagaaattgattggttgttgcgctactgccttgctctccccttgctgctcattttttgctgtcatggatctgctgccattgcag 455  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||||||||||||||    
T  24093152 gcttgcaccatcggatcagaaattgattggttgttgcgctactgccttgctctccccttgctgttcactttttgctgtcacggatatgctgccattgcag 24093251  T
Q  456 caacacattctacttcgtgtgaactgacaagcgcggatgagcttcaacatcgtggttaatgtgccaaagacctgctgtgctccacacaggttct 549  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||    
T  24093252 caacacattctacgtcgtgtgaactgacaagcgcggacgagcttcaacattgtggataatgtgccaaagacccgctgtgctccacaccggttct 24093345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 75 - 272
Target Start/End: Original strand, 24103408 - 24103604
Alignment:
Q  75 tcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaaca 174  Q
    ||||||||||||| ||  ||||| |||||||| || ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||| |    
T  24103408 tcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctattggccaaaccccaagcaaactctaaga 24103507  T
Q  175 gttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    | |  ||| | | ||||||||||||||| ||||||||| || |||||||| ||    ||||| || ||||||||||| |||||||| || ||||||||    
T  24103508 gcttctctcgtgacataactgtgatgctaccaaaattt-acataaacaactgatcttggttcttttgattcaagccactcaagacatttagtatcttc 24103604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 27999826 - 27999745
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggcc 152  Q
    |||||||||||||||||  |  |||||||||||||| || | ||||||| ||||||||||||| |||||||||| |||||||    
T  27999826 aaactcagatgacaaaaccactgagccaccaatgacaagattaggcctagtgatccacaaaaaaggtttcttgcaattggcc 27999745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 24104589 - 24104653
Alignment:
Q  278 ctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttt 342  Q
    |||||||||| |||| ||||||||| ||||||| ||||  |||||||||||||||||| ||||||    
T  24104589 ctagtttgaacaatgcattgatatgaccttgaaatggagctggaatcaacacagcatgcggcttt 24104653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 24106974 - 24107011
Alignment:
Q  211 ttcacgtaaacaacagactcaggttccttggattcaag 248  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  24106974 ttcacataaacaacaaactcaggttccttggattcaag 24107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 7e-72; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 3086825 - 3087025
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3086825 aaactcagatgacataataaaggagccgccaatgacaagatcaggcctaatgatccacaaaaatggtttcttgctattggccaaaccccaagcaaactct 3086924  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    || ||||| ||| ||||||||||||| ||||||||||||  |||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  3086925 aatagttgctcttgagtcataactgtaatgctgccaaaa-ctcacataaacaacagactcaagtccctttgattcaagccattcaagacacttggtatct 3087023  T
Q  271 tc 272  Q
    ||    
T  3087024 tc 3087025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 3088236 - 3088309
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttatca 348  Q
    |||||||||| || |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  3088236 ttgctagttttaacaatggatttatatgaccttgaagtggatatggaatcaacacagcatgtggctttttatca 3088309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 135; Significance: 4e-70; HSPs: 2)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 78 - 272
Target Start/End: Complemental strand, 3439 - 3246
Alignment:
Q  78 gatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagtt 177  Q
    |||||||||||||| ||||| |||||||| || ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  3439 gatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccacaaaaacggtttcttgctatcggccaaaccccaagcaaattctaacagtt 3340  T
Q  178 gatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    ||| ||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3339 gatttggagtcataactgtaatgctgccgaaa-ttcacataaacaacagactcaggttccttggattcgagccattcaagacacttggtatcttc 3246  T

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Target: scaffold0288; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 2088 - 2025
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  2088 ttgctagtttgaacaatggattgatatggccttgaactggatatggaatcatcacaacatgtgg 2025  T

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Target: scaffold0477 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 71 - 272
Target Start/End: Complemental strand, 4413 - 4213
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| | |||||| | ||||| |||  ||||||||||||||    
T  4413 aaactcagatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaacccaagcaaactct 4314  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  4313 aacagttgatctggagtcataactgtaatgcttccaaaa-ttcacataaacaaccgactcaggttccttggatgcaagccactcaagacacttggtatct 4215  T
Q  271 tc 272  Q
    ||    
T  4214 tc 4213  T

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Target: chr8 (Bit Score: 90; Significance: 3e-43; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 71 - 272
Target Start/End: Original strand, 1674631 - 1674831
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||||||  |  |||||||||||||| || ||||||||| ||||||||||||| |||||||||| || |||||| ||||||||||||||     
T  1674631 aaactcagatgacaaaaccactgagccaccaatgacaagatcaggcctagtgatccacaaaaaaggtttcttgcaatcggccaaaccccaagcaaactcc 1674730  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatct 270  Q
    || ||||||||||||||||||||  | ||||| || ||| ||||| |||||||| ||  | ||||| |||||||||||||||||||||||||  ||||||    
T  1674731 aatagttgatctggagtcataacaataatgctaccgaaa-ttcacataaacaaccgatcccggttcgttggattcaagccattcaagacactcagtatct 1674829  T
Q  271 tc 272  Q
    ||    
T  1674830 tc 1674831  T

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Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 271
Target Start/End: Complemental strand, 16685994 - 16685795
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||||||||||||||||  | ||| || | |||||| || |||| ||||||||||||   |||  ||| ||||||||||| ||| |||||||||||||||    
T  16685994 aaactcagatgacaaaaccacggaaccgcaaatgacaagatcagacctaatgatccattgaaaatgttgcttgctattggtcaaaccccaagcaaactct 16685895  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacag-actcaggttccttggattcaagccattcaagacacttggtatc 269  Q
    || ||||  |||| |||||||||||| ||||| |||||| ||||| |||||||| | |||| |||||||||||||||||||| |||||||||||||||||    
T  16685894 aatagtttttctgcagtcataactgtcatgctcccaaaa-ttcacataaacaacggaactc-ggttccttggattcaagccaatcaagacacttggtatc 16685797  T

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Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 71 - 260
Target Start/End: Complemental strand, 20863570 - 20863382
Alignment:
Q  71 aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactct 170  Q
    |||| ||||||| ||||| |  |||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  20863570 aaacgcagatgaaaaaatcaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactct 20863471  T
Q  171 aacagttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacagactcaggttccttggattcaagccattcaagaca 260  Q
    |||| ||  |||  || ||| |||||| | |||||||||||| || || |||| |||  | ||||| || |||||||||||| |||||||    
T  20863470 aacaatttttctacagacatgactgtggtactgccaaaattt-acatatacaatagatcccggttctttcgattcaagccatgcaagaca 20863382  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 1676012 - 1676074
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtg 337  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  1676012 ttgctagtttgaacaatggattgatatggccttgagctggatatggaatgaacacagcatgtg 1676074  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 351
Target Start/End: Complemental strand, 20862447 - 20862371
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggctttttatcagca 351  Q
    |||||||||| || | |||||||||||| ||||||| |||||||||| | ||||| |||||||| ||||| ||||||    
T  20862447 ttgctagttttaacattggattgatatgaccttgaagtggatatggagttaacactgcatgtggttttttctcagca 20862371  T

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Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 75 - 272
Target Start/End: Original strand, 1281523 - 1281719
Alignment:
Q  75 tcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgctattggccaatccccaagcaaactctaaca 174  Q
    |||||||||||||| |  ||||| |||||||| || ||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||| ||    |    
T  1281523 tcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattcctgaa 1281622  T
Q  175 gttgatctggagtcataactgtgatgctgccaaaatttcacgtaaacaacaga-ctcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    |||| ||||||||||||||||| ||||| || ||| ||||| ||||||||||| ||| |||||||| ||||||||||||| |||||||| | |||||||    
T  1281623 gttgctctggagtcataactgtaatgcttccgaaa-ttcacataaacaacagatctc-ggttccttcgattcaagccattgaagacactcgatatcttc 1281719  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 1282924 - 1282987
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtgg 338  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1282924 ttgctagtttgaacaatggattgatatggccttgagctggatatggaatcaacacagcatgtgg 1282987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 2315 - 2384
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggcttttt 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2315 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggtttttt 2384  T

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Target: scaffold0475; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 3208 - 3162
Alignment:
Q  99 ccaatgacgaggtcaggcctaatgatccacaaaaatggtttcttgct 145  Q
    |||||||| ||||||| |||||||||||||| ||| |||||||||||    
T  3208 ccaatgacaaggtcagacctaatgatccacacaaagggtttcttgct 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 1249 - 1311
Alignment:
Q  275 ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtg 337  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  1249 ttgctagtttgaacaatggattgatatggccttgagctggatatggaatgaacacagcatgtg 1311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 7 - 68
Alignment:
Q  211 ttcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttc 272  Q
    ||||| |||||||| ||  | ||||| |||||||||||||||||||||||||  ||||||||    
T  7 ttcacataaacaaccgatcccggttcgttggattcaagccattcaagacactcagtatcttc 68  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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