View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7135_high_2 (Length: 452)
Name: NF7135_high_2
Description: NF7135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7135_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 9 - 435
Target Start/End: Original strand, 36169247 - 36169675
Alignment:
| Q |
9 |
agcagagagaaaataagtaggttgatatggagagaaaaatatgtcaaaaatctaacaaccgacaaagagaaagatgaactttcaatttgattgtgggatt |
108 |
Q |
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| T |
36169247 |
agcagagagaaaataagtaggttgatatggagagaaagatatgtcaaaaatctaacaaccgacaaagagaaagatgaactttcaatttgattgtgggatt |
36169346 |
T |
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| Q |
109 |
gattatttacaccattacatgactaatatactatacataatacatgatttattttcaatag----atagatagataataattagaacttccatgtgatat |
204 |
Q |
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| T |
36169347 |
gattatttacaccattacatgactaatatacta--catgatacatgatttattttcaatagatagatagatagataataattagaacttccatgtgatat |
36169444 |
T |
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| Q |
205 |
catttttgaaatacccgaaccatcaacccatccttcaaagaggcagtaagacccggcccgaatttaagctcttgattatctccatcaacccgaatctcaa |
304 |
Q |
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| T |
36169445 |
tatttttgaaatacccgaaccatcaacccatccttcaaagaggcagtaagacccggcccgaatttaagctcttgattatctccatcaacccgaatctcaa |
36169544 |
T |
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| Q |
305 |
accttctaatcaaaccaacaacaacacatttcatttccattaaagccaattccttccccaaacaaaccctagcaccaccttgaaaaaccggatacttaaa |
404 |
Q |
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| T |
36169545 |
accttctaatcaaaccaacaacaacacatttcatttccattaaagccaattccttccccaaacaaaccctagcaccaccttgaaaaaccggatacttaaa |
36169644 |
T |
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| Q |
405 |
catactctcactcacaaaaaccccatctttc |
435 |
Q |
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| T |
36169645 |
catactctcactcacaaaaaccccatctttc |
36169675 |
T |
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