View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7135_low_1 (Length: 615)

Name: NF7135_low_1
Description: NF7135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7135_low_1
NF7135_low_1
[»] chr2 (12 HSPs)
chr2 (11-463)||(33043419-33043868)
chr2 (553-599)||(33043283-33043329)
chr2 (234-309)||(346109-346184)
chr2 (234-277)||(17413349-17413392)
chr2 (225-310)||(43424651-43424736)
chr2 (252-310)||(4180716-4180774)
chr2 (225-291)||(5168582-5168648)
chr2 (231-285)||(16221355-16221409)
chr2 (234-279)||(15227817-15227862)
chr2 (236-273)||(18881182-18881219)
chr2 (234-279)||(37132995-37133040)
chr2 (219-279)||(32957558-32957618)
[»] chr1 (15 HSPs)
chr1 (391-463)||(46884404-46884472)
chr1 (231-303)||(23203320-23203392)
chr1 (233-303)||(22346676-22346746)
chr1 (316-388)||(46884497-46884567)
chr1 (330-388)||(46884609-46884665)
chr1 (223-310)||(11701956-11702043)
chr1 (259-301)||(40734998-40735040)
chr1 (238-284)||(47835812-47835858)
chr1 (234-279)||(20711220-20711265)
chr1 (234-291)||(41763158-41763215)
chr1 (234-279)||(44243874-44243919)
chr1 (234-279)||(45701329-45701374)
chr1 (234-283)||(47280352-47280401)
chr1 (243-291)||(15668508-15668556)
chr1 (239-291)||(49431996-49432048)
[»] chr3 (7 HSPs)
chr3 (234-310)||(34442431-34442507)
chr3 (234-279)||(7202931-7202976)
chr3 (234-303)||(46298046-46298115)
chr3 (240-301)||(52456488-52456549)
chr3 (234-310)||(3582783-3582859)
chr3 (227-267)||(7101824-7101864)
chr3 (243-279)||(35557103-35557139)
[»] chr8 (10 HSPs)
chr8 (234-309)||(24023400-24023475)
chr8 (234-291)||(39139001-39139058)
chr8 (234-310)||(8461820-8461896)
chr8 (239-310)||(18638106-18638177)
chr8 (242-301)||(28580953-28581012)
chr8 (225-268)||(30551066-30551109)
chr8 (234-280)||(10320497-10320543)
chr8 (225-290)||(16340318-16340383)
chr8 (239-279)||(2508611-2508651)
chr8 (231-291)||(43330258-43330318)
[»] chr5 (5 HSPs)
chr5 (226-277)||(9584592-9584643)
chr5 (234-316)||(34191434-34191516)
chr5 (231-279)||(5551296-5551344)
chr5 (234-310)||(22538806-22538882)
chr5 (231-291)||(37054272-37054332)
[»] chr6 (7 HSPs)
chr6 (234-303)||(5937633-5937702)
chr6 (234-310)||(12256478-12256553)
chr6 (234-291)||(10018401-10018457)
chr6 (234-291)||(14429131-14429188)
chr6 (234-279)||(21296759-21296804)
chr6 (234-279)||(28732756-28732801)
chr6 (234-279)||(30639441-30639486)
[»] chr4 (9 HSPs)
chr4 (234-279)||(28031813-28031858)
chr4 (234-309)||(14202464-14202539)
chr4 (234-301)||(18903751-18903818)
chr4 (225-276)||(29731397-29731448)
chr4 (225-279)||(7248328-7248382)
chr4 (234-272)||(24378373-24378411)
chr4 (234-291)||(32006501-32006558)
chr4 (234-310)||(22164253-22164329)
chr4 (239-279)||(27408599-27408639)
[»] scaffold0003 (1 HSPs)
scaffold0003 (227-303)||(361239-361315)
[»] scaffold0012 (1 HSPs)
scaffold0012 (225-279)||(118811-118865)
[»] chr7 (4 HSPs)
chr7 (260-310)||(43139292-43139342)
chr7 (225-279)||(43681005-43681059)
chr7 (234-291)||(43539107-43539164)
chr7 (234-291)||(47677580-47677637)


Alignment Details
Target: chr2 (Bit Score: 325; Significance: 0; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 11 - 463
Target Start/End: Complemental strand, 33043868 - 33043419
Alignment:
Q  11 atgaacgtggactacgtgaatttgagattataaacatgattaaaatgagcatatatatcaaactgaaaaggatagagcagatcacattcacaaggaagta 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33043868 atgaacgtggactacgtgaatttgagattataaacatgattaaaatgagcatatatatcaaactgaaaaggatagagcagatcacattcacaaggaagta 33043769  T
Q  111 tgcatgattgaaatggtaatttattttccactttaactttacaaaggaaattaatgttcatttttaatcag-------ataaataataatataaaagcat 203  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||    
T  33043768 tgcatgattgaaatggtaatttattttccactttaac-ttacaaaggaaattaatgtgcatttttaatcagataaataataaataataatataaaagcat 33043670  T
Q  204 gtcaatgctaaacaacataagttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccacta 303  Q
    || ||||||||||||||||||||||| ||||||  |||||||||||| |||| | ||||||||||||| ||||| ||||||| ||||| || | ||||||    
T  33043669 gtgaatgctaaacaacataagttgtcgtcatgaacttagctcagttgtttgggacaatgcataaaataagtaagatacggggttcaaatcccggccacta 33043570  T
Q  304 tcaaaaagaacaaccagagaagcacaaagcagacacaaattattgtgtacatatatgcttaaattagattattgattattgatataagaaccaaaaagga 403  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||||||    
T  33043569 tcaaaa--aacaaccagagaagcacaaagcagacacaaattattgtacacatatatgcttaaatta-------gattattgatataagaaccaaaaagga 33043479  T
Q  404 aaatatataattaaaattaaacaaccaaagaaagtttacaatggagttacatgtcactga 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33043478 aaatatataattaaaattaaacaaccaaagaaagtttacaatggagttacatgtcactga 33043419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 33043329 - 33043283
Alignment:
Q  553 gactcctgccacctttgccttcccagcctttggcttcatgaagcaaa 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33043329 gactcctgccacctttgccttcccagcctttggcttcatgaagcaaa 33043283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 346184 - 346109
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaa 309  Q
    |||| |||||||||||| || ||||||||||||| ||||||||||| | ||| ||||| || |||||||| |||||    
T  346184 tgagcttagctcagttggtttgaataatgcataatatatgtaaggtccagggttcaaaccccgaccactaccaaaa 346109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 17413392 - 17413349
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaag 277  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  17413392 tgagtttaactcagttggttggaataatgcataaaatatgtaag 17413349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 43424651 - 43424736
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    ||||| ||||||| |||||||||||| |||||| ||||||||||||||| || || ||| | ||||| ||  |||||| |||||||    
T  43424651 ttgtcctcatgagcttagctcagttgattggaacaatgcataaaatatgcaaagttcggagttcaaaccccaaccactgtcaaaaa 43424736  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 310
Target Start/End: Original strand, 4180716 - 4180774
Alignment:
Q  252 ttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||| ||||||||||||||||| ||||| ||||| ||||| || |||||||| ||||||    
T  4180716 ttgggataatgcataaaatatgcaaggtccggggttcaaaccccgaccactaccaaaaa 4180774  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 5168648 - 5168582
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    ||||||||||||| ||| |||||||| | || ||||||||||| ||||| ||||| ||||| |||||    
T  5168648 ttgtcatcatgagcttaactcagttgatagggataatgcataatatatgcaaggttcggggttcaaa 5168582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 16221409 - 16221355
Alignment:
Q  231 tcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggg 285  Q
    |||||||||||||||||||| |  ||| ||||||||||||||| ||||| |||||    
T  16221409 tcatgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcgggg 16221355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 15227862 - 15227817
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||| | ||| | ||||||||||||||||||||||||||||    
T  15227862 tgagtttagtttagtcggttggaataatgcataaaatatgtaaggt 15227817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 18881219 - 18881182
Alignment:
Q  236 agtttagctcagttgcttggaataatgcataaaatatg 273  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  18881219 agtttagctcagttggttgggataatgcataaaatatg 18881182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 37133040 - 37132995
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||| |||||||||||| |||| | |||||||||||||||||||||    
T  37133040 tgagcttagctcagttggttgggacaatgcataaaatatgtaaggt 37132995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 32957618 - 32957558
Alignment:
Q  219 cataagttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||| |||||| |||||||||||| |||| |  ||| ||||||||| |||||||||||    
T  32957618 cataagtagtcatcgtgagtttagctcggttggtatgaacaatgcataatatatgtaaggt 32957558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 46884472 - 46884404
Alignment:
Q  391 gaaccaaaaaggaaaatatataattaaaattaaacaaccaaagaaagtttacaatggagttacatgtcactga 463  Q
    ||||||||||||||||||    || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  46884472 gaaccaaaaaggaaaata----atcaaaactaaacaaccaaagaaagtttacaatggagttacatgtcactga 46884404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 23203320 - 23203392
Alignment:
Q  231 tcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccacta 303  Q
    ||||||| |||||||||||| |||||| ||||||||||||||| ||||| ||||| ||||| || ||||||||    
T  23203320 tcatgagcttagctcagttggttggaacaatgcataaaatatgcaaggttcggggttcaaaccccgaccacta 23203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 22346676 - 22346746
Alignment:
Q  233 atgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccacta 303  Q
    ||||| |||||||||||| || | ||||||||||||||||| ||||| ||||| ||||| |||||||||||    
T  22346676 atgagcttagctcagttggtttggataatgcataaaatatgcaaggtccggggttcaaatcctgaccacta 22346746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 46884567 - 46884497
Alignment:
Q  316 accagagaagcacaaagcagacacaaattattgtgtacatatatgcttaaattagattattgattattgatat 388  Q
    |||| ||||| || |||| ||||||||||||||||  ||||||||||||||||| |||| |||||||||||||    
T  46884567 accaaagaagtacgaagctgacacaaattattgtg--catatatgcttaaattatattactgattattgatat 46884497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 46884665 - 46884609
Alignment:
Q  330 aagcagacacaaattattgtgtacatatatgcttaaattagattattgattattgatat 388  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||| ||||||||||    
T  46884665 aagctgacacaaattattgtg--catatatgcttaaattatattattggttattgatat 46884609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 310
Target Start/End: Original strand, 11701956 - 11702043
Alignment:
Q  223 agttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    ||||||| || |||| |||  ||||||| |||| | ||||||||||||||||||||| | |||  |||| ||||||||||| ||||||    
T  11701956 agttgtcctcgtgagcttaattcagttggttgggacaatgcataaaatatgtaaggtccagggtgcaaaccctgaccactaccaaaaa 11702043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 301
Target Start/End: Complemental strand, 40735040 - 40734998
Alignment:
Q  259 aatgcataaaatatgtaaggtacgggggtcaaaacctgaccac 301  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||    
T  40735040 aatgcataaaatatgtaaggttcggggttcaaaccctgaccac 40734998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 47835812 - 47835858
Alignment:
Q  238 tttagctcagttgcttggaataatgcataaaatatgtaaggtacggg 284  Q
    ||||||||||||| |||||| ||||||||||||||| ||||| ||||    
T  47835812 tttagctcagttggttggaacaatgcataaaatatgcaaggtccggg 47835858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 20711265 - 20711220
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||||||| |||||||||| |||| | |||||||||||||||||||    
T  20711265 tgagtttaactcagttgctaggaacagtgcataaaatatgtaaggt 20711220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 41763215 - 41763158
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    |||| |||||||||||| | || ||||||||||||||||| ||||| ||||| |||||    
T  41763215 tgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaa 41763158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 44243874 - 44243919
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| | |||| ||||||||| |||||||||||    
T  44243874 tgagtttagctcagttggtaggaacaatgcataatatatgtaaggt 44243919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 45701329 - 45701374
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| |  ||| |||||||||||||||||||||    
T  45701329 tgagtttagctcagttggtatgaacaatgcataaaatatgtaaggt 45701374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 47280401 - 47280352
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgg 283  Q
    ||||||| | ||||||| ||||||  ||||||||||||||||||||||||    
T  47280401 tgagtttggatcagttgattggaacgatgcataaaatatgtaaggtacgg 47280352  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 15668508 - 15668556
Alignment:
Q  243 ctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    |||||||| |||||| ||||||||||||||| ||||| ||||| |||||    
T  15668508 ctcagttggttggaacaatgcataaaatatgcaaggtccggggttcaaa 15668556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 49432048 - 49431996
Alignment:
Q  239 ttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    ||||||| |||| | |||||||||||||| ||||||||||| ||||| |||||    
T  49432048 ttagctcggttggtaggaataatgcataatatatgtaaggtccggggttcaaa 49431996  T

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Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 34442507 - 34442431
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||| |||||||||||  |||| | ||||||||||||||||||||| ||||| ||||| || | |||||||||||||    
T  34442507 tgagcttagctcagttagttgggacaatgcataaaatatgtaaggtccggggttcaaaccccggccactatcaaaaa 34442431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 7202976 - 7202931
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||    
T  7202976 tgagtttagctcagttggttggaacaatgcataaaatatgcaaggt 7202931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 46298115 - 46298046
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccacta 303  Q
    ||||||||||||||||| || | ||||||||||| ||||| || || || || ||||| |||||||||||    
T  46298115 tgagtttagctcagttggtttggataatgcataatatatgcaatgtccgaggttcaaaccctgaccacta 46298046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 52456488 - 52456549
Alignment:
Q  240 tagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccac 301  Q
    ||||||||||| |  | ||||||||||||||||||||||| ||||| || || |||||||||    
T  52456488 tagctcagttgttatggataatgcataaaatatgtaaggtccggggttcgaaccctgaccac 52456549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 3582783 - 3582859
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||| |||||||||||| |||| | ||||||||||||||| ||||| || || ||||| | ||||||| | ||||||    
T  3582783 tgagattagctcagttggttgggagaatgcataaaatatgcaaggtccgaggttcaaaccatgaccaccaccaaaaa 3582859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 7101864 - 7101824
Alignment:
Q  227 gtcatcatgagtttagctcagttgcttggaataatgcataa 267  Q
    ||||||||||| |||||||||||| | ||||||||||||||    
T  7101864 gtcatcatgagcttagctcagttgataggaataatgcataa 7101824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 35557103 - 35557139
Alignment:
Q  243 ctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||||||| |||| |||||||||||||||||||||||    
T  35557103 ctcagttgattgggataatgcataaaatatgtaaggt 35557139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 24023475 - 24023400
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaa 309  Q
    |||| |||||||||||  |||||| ||||||||||||||| ||||| ||||| ||||| || |||||||| |||||    
T  24023475 tgagcttagctcagttagttggaacaatgcataaaatatgcaaggtccggggttcaaaccccgaccactaccaaaa 24023400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 39139058 - 39139001
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    |||| |||||||||||| ||  |||||||||||||||||||||||| ||||| |||||    
T  39139058 tgagcttagctcagttggttttaataatgcataaaatatgtaaggttcggggttcaaa 39139001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 8461896 - 8461820
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||| |||||||||||| |||| | ||||||||||||||| ||||| ||| | ||||| || |||||||| ||||||    
T  8461896 tgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccggagttcaaaccccgaccactaccaaaaa 8461820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 18638106 - 18638177
Alignment:
Q  239 ttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||||||||||| |||||| ||||||||||||||| || ||| |||| ||||| || |||||| | ||||||    
T  18638106 ttagctcagttggttggaacaatgcataaaatatgcaaagtatggggttcaaaccccgaccacgagcaaaaa 18638177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 28580953 - 28581012
Alignment:
Q  242 gctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccac 301  Q
    ||||||||| |  ||||||||||||||||||||||||| ||||| ||||| || ||||||    
T  28580953 gctcagttggtatgaataatgcataaaatatgtaaggttcggggttcaaatcccgaccac 28581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 30551109 - 30551066
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaa 268  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||    
T  30551109 ttgtcctcatgagtttagctcagttgattggaacaatgcataaa 30551066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 10320497 - 10320543
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggta 280  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  10320497 tgagtttagctcagttgataagaataatgcataatatatgtaaggta 10320543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 16340318 - 16340383
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaa 290  Q
    ||||| || |||| |||| ||||||| |||||| || |||||||||||||||||| ||||| ||||    
T  16340318 ttgtcctcgtgagcttagttcagttggttggaacaacgcataaaatatgtaaggttcggggttcaa 16340383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 2508611 - 2508651
Alignment:
Q  239 ttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||||||||||| |||||| ||||||||||||||| |||||    
T  2508611 ttagctcagttggttggaacaatgcataaaatatgcaaggt 2508651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 43330318 - 43330258
Alignment:
Q  231 tcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    ||||||| |||||||||||| |||||| ||| ||||||||||| || ||||| || |||||    
T  43330318 tcatgagcttagctcagttggttggaacaatacataaaatatgcaacgtacgaggttcaaa 43330258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 9584592 - 9584643
Alignment:
Q  226 tgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaag 277  Q
    ||||||| |||||||| |||||||| |||||| |||||||||||||||||||    
T  9584592 tgtcatcgtgagtttaactcagttgattggaacaatgcataaaatatgtaag 9584643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 34191434 - 34191516
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaagaacaa 316  Q
    |||| |||||||||||| |||| | ||||||||||||||| ||||| ||||| ||||| || | |||||| |||||| |||||    
T  34191434 tgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccggggttcaaaccccggccactaccaaaaaaaacaa 34191516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 5551344 - 5551296
Alignment:
Q  231 tcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||| |||||||||||| |||||| ||||||||||||||| |||||    
T  5551344 tcatgagcttagctcagttggttggaacaatgcataaaatatgcaaggt 5551296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 22538882 - 22538806
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||| ||| |||||||| ||| |||||||||||||||||| ||||| |  || ||||| | ||||||||| ||||||    
T  22538882 tgagcttaactcagttggttgtaataatgcataaaatatgcaaggtccaaggttcaaaccttgaccactaccaaaaa 22538806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 37054332 - 37054272
Alignment:
Q  231 tcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    |||||||||||||||||||| | || | ||||||||| |||| |||||| ||||| |||||    
T  37054332 tcatgagtttagctcagttggtagggacaatgcataatatatataaggttcggggttcaaa 37054272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000009; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 5937633 - 5937702
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccacta 303  Q
    |||| |||||||||||| |||  | ||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  5937633 tgagcttagctcagttggttgagacaatgcataaaatatgaaaggtccggggttcaaaatctgaccacta 5937702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 12256478 - 12256553
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||| |||||||||||| ||| ||||||||||||||||||||| ||  |||| | ||| ||||||||||| ||||||    
T  12256478 tgagcttagctcagttggttg-aataatgcataaaatatgtaaagtctggggtttaaaccctgaccactaccaaaaa 12256553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 10018401 - 10018457
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    ||||||||||||||||| | ||| |||||||||| ||||||||||| ||||| |||||    
T  10018401 tgagtttagctcagttggtagga-taatgcataatatatgtaaggttcggggttcaaa 10018457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 14429188 - 14429131
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    |||||||| |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||    
T  14429188 tgagtttatctcagttggttgggataatacataaaatatgcaaggtccggggttcaaa 14429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 21296759 - 21296804
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| |||| | ||||||||||||||| |||||    
T  21296759 tgagtttagctcagttggttgggacaatgcataaaatatgcaaggt 21296804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 28732756 - 28732801
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| || ||| || ||||||||||||||||||    
T  28732756 tgagtttagctcagttggttagaacaacgcataaaatatgtaaggt 28732801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 30639486 - 30639441
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| | |||||||||||||| ||||| |||||    
T  30639486 tgagtttagctcagttggtaggaataatgcataatatatgcaaggt 30639441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000009; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 28031813 - 28031858
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||    
T  28031813 tgagtttagctcagttggttggaacaatgcataaaatatgcaaggt 28031858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 14202539 - 14202464
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaa 309  Q
    |||| ||| |||||||| || | ||||||||||| ||||||||||| ||||| ||||| || |||||||| |||||    
T  14202539 tgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttcaaaccccgaccactaccaaaa 14202464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 18903818 - 18903751
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccac 301  Q
    ||||||||||||||||| |   |||||||||||| |||||||||||  |||| ||||| |||||||||    
T  18903818 tgagtttagctcagttgataaaaataatgcataatatatgtaaggtctggggttcaaaccctgaccac 18903751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 29731448 - 29731397
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaa 276  Q
    |||||||| ||||||||||||||||| ||||   ||||||||||||||||||    
T  29731448 ttgtcatcgtgagtttagctcagttggttggggcaatgcataaaatatgtaa 29731397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 7248328 - 7248382
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||||||| |||||||| |||||||| |||| | ||||||||||||||| |||||    
T  7248328 ttgtcatcgtgagtttaactcagttgattgggacaatgcataaaatatgcaaggt 7248382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 24378411 - 24378373
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatat 272  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  24378411 tgagtttagctcagttggttggaataatgaataaaatat 24378373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 32006501 - 32006558
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    ||||||||||||||||| | || ||||||||||| |||||||| || ||||| |||||    
T  32006501 tgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttcaaa 32006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 22164329 - 22164253
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    ||||||||||| ||||| | |||| ||||||||| |||||||||||  |||| ||||| || |||||| | ||||||    
T  22164329 tgagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaaccccgaccaccaacaaaaa 22164253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 27408639 - 27408599
Alignment:
Q  239 ttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||||| ||||| ||| ||||||||||||||||||||||||    
T  27408639 ttagcttagttggttgaaataatgcataaaatatgtaaggt 27408599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 361315 - 361239
Alignment:
Q  227 gtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaaacctgaccacta 303  Q
    |||||| |||| |||| ||||||| |  | |||||||||||||||||| |||| ||||| ||||| |||||||||||    
T  361315 gtcatcgtgagcttagttcagttggtatggataatgcataaaatatgttaggttcggggttcaaaccctgaccacta 361239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 118811 - 118865
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    ||||| || |||| |||||||||||| || ||| |||||||||||||||||||||    
T  118811 ttgtcctcgtgagcttagctcagttggtttgaacaatgcataaaatatgtaaggt 118865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 43139292 - 43139342
Alignment:
Q  260 atgcataaaatatgtaaggtacgggggtcaaaacctgaccactatcaaaaa 310  Q
    |||||||||||||| ||||||||||| ||||| || |||||||| ||||||    
T  43139292 atgcataaaatatgcaaggtacggggttcaaaccccgaccactaccaaaaa 43139342  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 43681059 - 43681005
Alignment:
Q  225 ttgtcatcatgagtttagctcagttgcttggaataatgcataaaatatgtaaggt 279  Q
    |||||||| |||||||| |||||||| |||| | ||||||||||||||| |||||    
T  43681059 ttgtcatcgtgagtttaactcagttgattgggacaatgcataaaatatgcaaggt 43681005  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 43539164 - 43539107
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    |||| |||||||||||| | |||| ||||||||| ||||||||||| ||||| |||||    
T  43539164 tgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaa 43539107  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 47677637 - 47677580
Alignment:
Q  234 tgagtttagctcagttgcttggaataatgcataaaatatgtaaggtacgggggtcaaa 291  Q
    ||||||||||||||||| || ||| ||||||||||||||| || || ||||| |||||    
T  47677637 tgagtttagctcagttggttagaacaatgcataaaatatgcaatgttcggggttcaaa 47677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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