View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7136_low_2 (Length: 865)

Name: NF7136_low_2
Description: NF7136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7136_low_2
NF7136_low_2
[»] chr8 (41 HSPs)
chr8 (11-846)||(5921983-5922819)
chr8 (76-419)||(11879599-11879950)
chr8 (76-419)||(11897015-11897366)
chr8 (77-419)||(45403029-45403379)
chr8 (76-419)||(7489062-7489414)
chr8 (79-360)||(15294672-15294960)
chr8 (79-360)||(15475041-15475329)
chr8 (126-419)||(23142224-23142524)
chr8 (79-408)||(19704247-19704583)
chr8 (78-419)||(29384091-29384444)
chr8 (77-360)||(17646993-17647288)
chr8 (76-419)||(31424162-31424514)
chr8 (96-392)||(32424354-32424656)
chr8 (76-360)||(22910041-22910332)
chr8 (116-360)||(6810861-6811110)
chr8 (74-311)||(27836351-27836596)
chr8 (81-350)||(3094092-3094378)
chr8 (292-419)||(24414066-24414193)
chr8 (215-360)||(15761196-15761344)
chr8 (76-152)||(477101-477177)
chr8 (304-414)||(2040354-2040464)
chr8 (74-179)||(15761466-15761571)
chr8 (76-180)||(24056594-24056698)
chr8 (81-296)||(6292246-6292467)
chr8 (307-416)||(40541602-40541711)
chr8 (302-416)||(16752256-16752370)
chr8 (286-414)||(17566315-17566443)
chr8 (269-419)||(24056349-24056499)
chr8 (286-360)||(15231838-15231912)
chr8 (491-576)||(9217206-9217291)
chr8 (72-121)||(23136344-23136393)
chr8 (313-393)||(7262006-7262086)
chr8 (316-360)||(27836137-27836181)
chr8 (267-340)||(8582241-8582314)
chr8 (86-201)||(15231733-15231848)
chr8 (334-419)||(19335241-19335325)
chr8 (166-251)||(9212202-9212295)
chr8 (76-140)||(17788372-17788436)
chr8 (74-118)||(27672303-27672347)
chr8 (213-319)||(1018060-1018167)
chr8 (78-121)||(9036758-9036801)
[»] chr6 (44 HSPs)
chr6 (77-416)||(15527892-15528239)
chr6 (77-419)||(26053075-26053425)
chr6 (77-419)||(26073128-26073478)
chr6 (76-419)||(17103201-17103545)
chr6 (74-419)||(19748330-19748683)
chr6 (76-419)||(7223518-7223865)
chr6 (76-419)||(27233078-27233407)
chr6 (76-419)||(17543509-17543870)
chr6 (76-421)||(23897810-23898162)
chr6 (76-419)||(11327341-11327701)
chr6 (77-416)||(17250057-17250404)
chr6 (203-419)||(7918129-7918343)
chr6 (76-419)||(30912185-30912542)
chr6 (73-299)||(21354744-21354970)
chr6 (260-419)||(22498219-22498378)
chr6 (76-201)||(6943465-6943590)
chr6 (73-326)||(10508889-10509156)
chr6 (77-241)||(7918338-7918510)
chr6 (267-419)||(3573678-3573831)
chr6 (85-235)||(22498848-22499006)
chr6 (74-180)||(18491063-18491169)
chr6 (80-354)||(2912105-2912373)
chr6 (292-419)||(27614435-27614562)
chr6 (304-419)||(27890621-27890736)
chr6 (267-360)||(4841667-4841760)
chr6 (74-156)||(5422798-5422880)
chr6 (79-154)||(3573984-3574059)
chr6 (304-418)||(31108390-31108504)
chr6 (80-169)||(33583766-33583855)
chr6 (97-179)||(4841946-4842026)
chr6 (336-419)||(21354942-21355025)
chr6 (73-154)||(10958239-10958320)
chr6 (104-181)||(18490910-18490987)
chr6 (307-419)||(33583445-33583557)
chr6 (313-360)||(8275368-8275415)
chr6 (86-169)||(8285760-8285843)
chr6 (304-390)||(4596661-4596747)
chr6 (304-421)||(33592928-33593044)
chr6 (104-169)||(18490998-18491063)
chr6 (305-385)||(20432406-20432486)
chr6 (84-152)||(8545019-8545087)
chr6 (313-358)||(1179068-1179114)
chr6 (329-419)||(23506102-23506192)
chr6 (215-299)||(27890519-27890603)
[»] chr5 (31 HSPs)
chr5 (78-419)||(18843716-18844065)
chr5 (76-417)||(19578941-19579292)
chr5 (77-419)||(43234868-43235218)
chr5 (76-417)||(18051314-18051660)
chr5 (78-360)||(23172266-23172560)
chr5 (88-419)||(41688445-41688782)
chr5 (126-419)||(20320992-20321293)
chr5 (73-360)||(21058994-21059288)
chr5 (85-419)||(27339966-27340307)
chr5 (77-360)||(38158102-38158383)
chr5 (75-419)||(22645506-22645850)
chr5 (77-201)||(20923718-20923842)
chr5 (221-419)||(19042207-19042404)
chr5 (217-419)||(43005638-43005841)
chr5 (304-419)||(41427654-41427769)
chr5 (126-312)||(19979648-19979848)
chr5 (314-416)||(15051879-15051981)
chr5 (214-419)||(26021465-26021661)
chr5 (79-151)||(19042444-19042516)
chr5 (214-395)||(24648161-24648335)
chr5 (307-355)||(19377841-19377889)
chr5 (304-356)||(22984643-22984695)
chr5 (372-419)||(6852345-6852392)
chr5 (79-143)||(20320926-20320990)
chr5 (76-169)||(13342024-13342116)
chr5 (81-150)||(24106645-24106714)
chr5 (304-419)||(13341476-13341591)
chr5 (375-419)||(23172223-23172267)
chr5 (74-166)||(41427081-41427173)
chr5 (307-354)||(30799635-30799682)
chr5 (78-144)||(13350122-13350188)
[»] chr4 (45 HSPs)
chr4 (77-419)||(9770112-9770462)
chr4 (77-418)||(9911191-9911541)
chr4 (76-419)||(23064740-23065093)
chr4 (79-419)||(5375666-5376015)
chr4 (76-419)||(36120823-36121173)
chr4 (76-396)||(5361767-5362093)
chr4 (76-360)||(10142898-10143191)
chr4 (72-419)||(8889223-8889566)
chr4 (78-356)||(17466080-17466366)
chr4 (76-414)||(13023566-13023903)
chr4 (77-201)||(8011221-8011345)
chr4 (214-419)||(6346734-6346940)
chr4 (215-388)||(8010946-8011120)
chr4 (76-201)||(13551627-13551752)
chr4 (76-360)||(37240261-37240530)
chr4 (73-181)||(7044723-7044831)
chr4 (217-419)||(24719722-24719918)
chr4 (307-416)||(55476226-55476335)
chr4 (214-419)||(7045086-7045294)
chr4 (76-181)||(18459733-18459838)
chr4 (81-181)||(7815561-7815661)
chr4 (214-355)||(9149565-9149708)
chr4 (227-360)||(10394768-10394901)
chr4 (281-407)||(13551463-13551589)
chr4 (77-180)||(4156763-4156866)
chr4 (214-360)||(7044907-7045054)
chr4 (76-170)||(24719516-24719610)
chr4 (76-182)||(6347088-6347194)
chr4 (76-181)||(7452419-7452523)
chr4 (291-395)||(5943062-5943166)
chr4 (270-360)||(7452707-7452796)
chr4 (311-416)||(4157269-4157377)
chr4 (311-416)||(4157556-4157664)
chr4 (304-356)||(8367437-8367489)
chr4 (77-128)||(9149813-9149864)
chr4 (288-357)||(8931441-8931510)
chr4 (215-318)||(4156998-4157101)
chr4 (76-127)||(5846458-5846509)
chr4 (119-181)||(7803049-7803110)
chr4 (119-181)||(7825002-7825064)
chr4 (305-359)||(8743604-8743658)
chr4 (214-252)||(18459563-18459601)
chr4 (214-299)||(55476120-55476205)
chr4 (304-349)||(5884129-5884174)
chr4 (76-121)||(8744087-8744132)
[»] scaffold0186 (1 HSPs)
scaffold0186 (70-416)||(8436-8788)
[»] chr1 (48 HSPs)
chr1 (76-419)||(21846053-21846398)
chr1 (74-419)||(9351842-9352195)
chr1 (76-419)||(18304597-18304941)
chr1 (76-415)||(9954816-9955165)
chr1 (73-419)||(13100187-13100540)
chr1 (76-419)||(25146547-25146898)
chr1 (77-419)||(23528656-23529006)
chr1 (79-406)||(19009740-19010073)
chr1 (84-419)||(16125234-16125580)
chr1 (77-421)||(13276036-13276395)
chr1 (78-419)||(42179850-42180193)
chr1 (78-421)||(17869527-17869873)
chr1 (79-419)||(12513283-12513621)
chr1 (76-303)||(9327109-9327345)
chr1 (72-389)||(9128647-9128974)
chr1 (286-419)||(14074262-14074395)
chr1 (196-360)||(47785986-47786149)
chr1 (166-349)||(32881416-32881600)
chr1 (76-201)||(41032675-41032800)
chr1 (267-419)||(17055699-17055850)
chr1 (233-421)||(16434673-16434861)
chr1 (76-201)||(17056004-17056129)
chr1 (76-181)||(18337547-18337651)
chr1 (304-416)||(17197311-17197423)
chr1 (77-152)||(30619075-30619150)
chr1 (270-419)||(41032552-41032701)
chr1 (77-172)||(14074404-14074499)
chr1 (95-249)||(18228230-18228380)
chr1 (271-419)||(30619145-30619290)
chr1 (77-164)||(12800623-12800710)
chr1 (76-143)||(34478833-34478900)
chr1 (69-181)||(8772696-8772809)
chr1 (367-419)||(9954775-9954827)
chr1 (482-572)||(39783865-39783959)
chr1 (306-419)||(12002640-12002751)
chr1 (306-417)||(8773505-8773613)
chr1 (80-181)||(27917477-27917578)
chr1 (262-338)||(18228457-18228533)
chr1 (73-169)||(27502239-27502335)
chr1 (473-576)||(15382159-15382262)
chr1 (75-181)||(24117005-24117111)
chr1 (334-383)||(9321550-9321599)
chr1 (323-356)||(27502197-27502230)
chr1 (76-121)||(47785791-47785836)
chr1 (214-299)||(12002771-12002856)
chr1 (76-113)||(16417308-16417345)
chr1 (268-305)||(17055995-17056032)
chr1 (307-360)||(22789421-22789474)
[»] chr3 (54 HSPs)
chr3 (76-419)||(28745769-28746126)
chr3 (75-419)||(29067282-29067626)
chr3 (80-419)||(39427905-39428257)
chr3 (76-419)||(24619976-24620333)
chr3 (77-360)||(20756039-20756313)
chr3 (75-360)||(8155967-8156262)
chr3 (82-360)||(17064326-17064598)
chr3 (77-419)||(22137278-22137627)
chr3 (95-301)||(22494679-22494892)
chr3 (78-360)||(3449148-3449419)
chr3 (150-365)||(42696920-42697144)
chr3 (86-396)||(21963438-21963758)
chr3 (86-396)||(21985874-21986194)
chr3 (75-416)||(22355848-22356184)
chr3 (77-201)||(30727696-30727820)
chr3 (226-360)||(25870160-25870294)
chr3 (77-201)||(24649693-24649818)
chr3 (304-419)||(8592178-8592293)
chr3 (196-350)||(15515106-15515258)
chr3 (214-419)||(27676580-27676786)
chr3 (239-396)||(13286113-13286271)
chr3 (223-388)||(6136379-6136543)
chr3 (76-189)||(25870389-25870506)
chr3 (76-181)||(15806531-15806635)
chr3 (76-181)||(27676355-27676460)
chr3 (304-416)||(3041458-3041570)
chr3 (87-181)||(10872971-10873065)
chr3 (76-177)||(17796267-17796368)
chr3 (76-177)||(19104707-19104808)
chr3 (267-419)||(10872494-10872646)
chr3 (76-177)||(17796376-17796477)
chr3 (76-177)||(17796485-17796586)
chr3 (76-177)||(19104816-19104917)
chr3 (76-177)||(19104925-19105026)
chr3 (304-416)||(8560239-8560351)
chr3 (306-419)||(20766680-20766793)
chr3 (304-416)||(18014226-18014338)
chr3 (304-416)||(22971044-22971155)
chr3 (316-419)||(41671426-41671529)
chr3 (197-360)||(9152823-9152984)
chr3 (267-360)||(28135960-28136053)
chr3 (278-419)||(27090645-27090792)
chr3 (304-419)||(21553672-21553786)
chr3 (273-396)||(17796771-17796892)
chr3 (273-396)||(19105211-19105332)
chr3 (304-416)||(19348788-19348900)
chr3 (373-419)||(24649528-24649574)
chr3 (78-156)||(28135723-28135801)
chr3 (473-576)||(25296557-25296659)
chr3 (333-421)||(13006089-13006176)
chr3 (304-421)||(27055328-27055445)
chr3 (215-298)||(6861039-6861123)
chr3 (81-121)||(42696870-42696910)
chr3 (214-299)||(19348685-19348770)
[»] chr2 (45 HSPs)
chr2 (71-421)||(31237753-31238112)
chr2 (76-419)||(1404782-1405133)
chr2 (76-419)||(20063713-20064073)
chr2 (76-360)||(36429847-36430139)
chr2 (78-365)||(35565787-35566082)
chr2 (76-360)||(15588693-15588979)
chr2 (238-419)||(30432984-30433165)
chr2 (79-304)||(31578007-31578238)
chr2 (229-419)||(19262095-19262285)
chr2 (76-243)||(30432418-30432593)
chr2 (76-201)||(23863326-23863451)
chr2 (214-419)||(25538924-25539130)
chr2 (196-362)||(1690564-1690730)
chr2 (79-201)||(25539231-25539353)
chr2 (304-416)||(974573-974686)
chr2 (304-413)||(27523881-27523990)
chr2 (217-419)||(8428369-8428572)
chr2 (77-201)||(19491855-19491980)
chr2 (75-183)||(1690785-1690893)
chr2 (214-360)||(16766930-16767076)
chr2 (310-416)||(20034004-20034110)
chr2 (304-419)||(19245824-19245939)
chr2 (307-417)||(21869102-21869212)
chr2 (233-360)||(13502511-13502639)
chr2 (310-416)||(7302023-7302129)
chr2 (214-359)||(27406935-27407081)
chr2 (217-304)||(34841728-34841816)
chr2 (76-179)||(17995054-17995157)
chr2 (74-180)||(5395674-5395780)
chr2 (76-182)||(15266081-15266187)
chr2 (217-304)||(19492079-19492168)
chr2 (304-390)||(34578124-34578210)
chr2 (77-171)||(16766710-16766804)
chr2 (113-179)||(31023259-31023325)
chr2 (206-337)||(5395384-5395515)
chr2 (76-137)||(15627654-15627715)
chr2 (77-122)||(29660893-29660938)
chr2 (218-298)||(31023450-31023531)
chr2 (76-120)||(19245152-19245196)
chr2 (77-156)||(19257568-19257647)
chr2 (76-164)||(27750194-27750282)
chr2 (113-169)||(34841592-34841648)
chr2 (214-299)||(974470-974555)
chr2 (214-299)||(41002157-41002242)
chr2 (269-354)||(15627944-15628029)
[»] chr7 (54 HSPs)
chr7 (71-421)||(4247350-4247708)
chr7 (78-419)||(5058530-5058878)
chr7 (76-396)||(24725274-24725607)
chr7 (115-419)||(17811385-17811698)
chr7 (77-419)||(44944624-44944978)
chr7 (77-419)||(5715290-5715631)
chr7 (83-419)||(20570664-20571002)
chr7 (76-421)||(27221417-27221767)
chr7 (76-360)||(14055250-14055548)
chr7 (76-360)||(14365278-14365576)
chr7 (76-360)||(8329882-8330175)
chr7 (79-359)||(8346370-8346660)
chr7 (77-360)||(21846285-21846554)
chr7 (73-356)||(8343644-8343933)
chr7 (77-257)||(24990012-24990200)
chr7 (73-252)||(26281256-26281442)
chr7 (261-419)||(24989553-24989710)
chr7 (84-209)||(8571250-8571375)
chr7 (76-360)||(7730197-7730472)
chr7 (76-201)||(39182259-39182383)
chr7 (77-201)||(22687669-22687793)
chr7 (77-201)||(11326386-11326510)
chr7 (70-360)||(26617315-26617612)
chr7 (76-201)||(9685249-9685374)
chr7 (86-360)||(11324988-11325269)
chr7 (270-360)||(39182357-39182447)
chr7 (270-419)||(11326484-11326633)
chr7 (230-350)||(27509260-27509379)
chr7 (196-359)||(6916907-6917068)
chr7 (304-416)||(25842513-25842625)
chr7 (304-419)||(8304321-8304436)
chr7 (214-360)||(26565386-26565532)
chr7 (281-407)||(9685085-9685211)
chr7 (77-180)||(30294175-30294275)
chr7 (228-396)||(30294404-30294572)
chr7 (268-356)||(8329821-8329909)
chr7 (260-360)||(8572329-8572428)
chr7 (304-416)||(1981107-1981217)
chr7 (304-419)||(4574965-4575080)
chr7 (278-360)||(1977758-1977839)
chr7 (132-201)||(1977707-1977776)
chr7 (268-356)||(8346308-8346396)
chr7 (76-163)||(8630001-8630088)
chr7 (310-360)||(23618267-23618317)
chr7 (97-201)||(27509948-27510052)
chr7 (73-171)||(26565663-26565761)
chr7 (307-359)||(26340212-26340263)
chr7 (301-419)||(22687046-22687164)
chr7 (81-143)||(4574475-4574537)
chr7 (342-419)||(10285682-10285759)
chr7 (86-139)||(17809440-17809493)
chr7 (304-403)||(21157495-21157587)
chr7 (335-419)||(26281169-26281251)
chr7 (214-299)||(25842643-25842728)
[»] scaffold0417 (1 HSPs)
scaffold0417 (73-385)||(7268-7588)
[»] scaffold0042 (1 HSPs)
scaffold0042 (76-365)||(93538-93834)
[»] scaffold0016 (1 HSPs)
scaffold0016 (240-419)||(56204-56384)
[»] scaffold0603 (2 HSPs)
scaffold0603 (214-360)||(8797-8944)
scaffold0603 (76-177)||(9049-9150)
[»] scaffold0510 (2 HSPs)
scaffold0510 (76-201)||(105-231)
scaffold0510 (270-360)||(42-131)
[»] scaffold0079 (1 HSPs)
scaffold0079 (304-416)||(14708-14820)
[»] scaffold0017 (1 HSPs)
scaffold0017 (304-419)||(38306-38420)
[»] scaffold0048 (3 HSPs)
scaffold0048 (76-169)||(48825-48918)
scaffold0048 (263-360)||(48500-48597)
scaffold0048 (269-360)||(61152-61243)
[»] scaffold0534 (1 HSPs)
scaffold0534 (286-414)||(887-1015)
[»] scaffold0027 (1 HSPs)
scaffold0027 (304-360)||(132953-133009)
[»] scaffold0061 (1 HSPs)
scaffold0061 (304-419)||(76088-76202)
[»] scaffold2084 (1 HSPs)
scaffold2084 (322-416)||(81-175)
[»] scaffold0036 (1 HSPs)
scaffold0036 (76-181)||(37191-37296)
[»] scaffold0150 (1 HSPs)
scaffold0150 (267-365)||(33131-33234)
[»] scaffold0115 (1 HSPs)
scaffold0115 (77-162)||(35103-35188)
[»] scaffold0028 (1 HSPs)
scaffold0028 (307-356)||(145826-145875)
[»] scaffold0526 (1 HSPs)
scaffold0526 (214-416)||(8289-8503)
[»] scaffold0001 (1 HSPs)
scaffold0001 (304-360)||(142864-142920)
[»] scaffold0684 (1 HSPs)
scaffold0684 (215-326)||(5099-5208)
[»] scaffold0182 (1 HSPs)
scaffold0182 (304-405)||(24621-24722)
[»] scaffold1178 (1 HSPs)
scaffold1178 (214-360)||(467-624)
[»] scaffold0163 (1 HSPs)
scaffold0163 (215-326)||(2910-3019)


Alignment Details
Target: chr8 (Bit Score: 692; Significance: 0; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 692; E-Value: 0
Query Start/End: Original strand, 11 - 846
Target Start/End: Original strand, 5921983 - 5922819
Alignment:
Q  11 gtgagatgaattgttaaagttaccacttttaagtagaggtttagggtacttaatgtcattacaaccattgttgtcaaaatcccgacttaaatcctaaaat 110  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5921983 gtgacatgaattgttagagttaccacttttaagtagaggtttagggtacttaatgtcattacaaccattgttgtcaaaatcccgacttaaatcctaaaat 5922082  T
Q  111 ccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt--------c 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        |    
T  5922083 ccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttgcgatttc 5922182  T
Q  203 ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  5922183 ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatta-gattgcgattttacaat 5922281  T
Q  303 ttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaa 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5922282 ttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctgaagtaa 5922381  T
Q  403 agtcccgattttgacaatccagcaatataaaactaataaatttatgagttttgtgcattagtattagcttgagcactgttatttatttagatggaaattg 502  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5922382 agtcccgattttgacaacccagcaatataaaactaataaatttatgagttttctgcattagtattagcttgagcactgttatttatttagatggaaattg 5922481  T
Q  503 tcccgatcagattgcgaatagcagttaaccaattacctctttgcctgcccacaaaacaaggaaggtggtgctatnnnnnnnnnttgagtagaaaaactgt 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||         |||||||||||||||||    
T  5922482 tcccgatcagattgcgaatagcagttaaccaattacctctttgcctggccacaaaacaaggaaggtggtgctataaaaaaaatttgagtagaaaaactgt 5922581  T
Q  603 ggtgaaactttcgcatggaaatctttcgtgataagcagcattacgctattagtttttattttgttttgtgtccatttgattaccatcttagttgtgaaca 702  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922582 ggtgaaactttcgcatggaaatctgtcgtgataagcagcattatgctatcagtttttattttgttttgtgtccatttgattaccatcttagttgtgaaca 5922681  T
Q  703 tgtgtaatacaataaaccttcacatacgaagagcaacatgttgtgtcaaagtgaatattcattaaagtcccatattgtgttgttagaagaaaaggtagaa 802  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| |||     |||||||||||||||    
T  5922682 tgtgtaatacaataaaccttcacatacaaagagcaacatgttgtgccaaagtgaatattcattgaagtctcatatt-tgt-----gaagaaaaggtagaa 5922775  T
Q  803 agtttttataaataagaaggtttatattgagttttaatttcttc 846  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5922776 agtttttataaataagaaggtttatattgagttttaatttcttc 5922819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 11879599 - 11879950
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||  ||||||||||| |||||||||| ||||| |||||||||||| |||||||  |    
T  11879599 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11879698  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    |||| |||||||||||||||||||        |||||||||| || || |||||||||||||||||||| ||||||||||||||||||||   ||||| |    
T  11879699 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatatatttagtattattattttttg 11879798  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||  |    
T  11879799 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgag 11879898  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||| |||||| ||||||||||| |||||| |||||| |||||||||||||||    
T  11879899 ttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaa 11879950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 11897015 - 11897366
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||  ||||||||||| |||||||||| ||||| |||||||||||| |||||||  |    
T  11897015 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11897114  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    |||| |||||||||||||||||||        |||||||||| || || |||||||||||||||||||| ||||||||||||||||||||   ||||| |    
T  11897115 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatatatttagtattattattttttg 11897214  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||  |    
T  11897215 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgag 11897314  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||| |||||| ||||||||||| |||||| |||||| |||||||||||||||    
T  11897315 ttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaa 11897366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 77 - 419
Target Start/End: Original strand, 45403029 - 45403379
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||||  |||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  177 aatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaa-attttttgg 267  Q
    |||||||||||||||||||||||||        ||||| ||  | |||||||||||  |||||||||| |||||||||||||| |||||  ||||||| |    
T  45403129 aatccatcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatataccatttataacatatatttaatattattatttttttg 45403228  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||| |||  |    
T  45403229 gtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgag 45403327  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |   |||||||||||||||||||||| || | ||||||||||||||||||||    
T  45403328 tctcgattttgctattccctttcgacgtgaaataaagtcccgattttgacaa 45403379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 7489414 - 7489062
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaa----ata 171  Q
    |||| ||||||||||||| | ||||||| |||||| ||| ||||||   ||||||||||||||||||||| |||||| ||||||||| | |||    |||    
T  7489414 cattattgtcaaaatccccaattaaatcgtaaaatacagaattttg---ctttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaata 7489318  T
Q  172 gacaaaatccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttt 263  Q
    ||||||||  |||||||||||||||        |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||  |||    
T  7489317 gacaaaatttatcgattttgattgcaattttatgatttcttataaattaagtcatttatgactatatatcatttataacatatatttagtattaatattt 7489218  T
Q  264 ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgta 363  Q
    ||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  7489217 ttgagtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgatttta 7489118  T
Q  364 catgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |  || || ||||||||||| ||||||||| || |||||||||| |||||||||||    
T  7489117 cgagtcctaattttgctatttcctttcgacttgaagtaaagtcctgattttgacaa 7489062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 79 - 360
Target Start/End: Original strand, 15294672 - 15294960
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    |||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||| |||||||||| ||||||||| |||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15294771  T
Q  179 tccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggta 270  Q
    |||||||||||||||||||||||        |||||||| || |||||||||||||||| || |||  |||||||||||||||||||  |||||| ||||    
T  15294772 tccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatatatttagtattat-ttttttaggta 15294870  T
Q  271 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||| ||||| | |||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15294871 aaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 15294960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 79 - 360
Target Start/End: Original strand, 15475041 - 15475329
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    |||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||| |||||||||| ||||||||| |||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15475140  T
Q  179 tccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggta 270  Q
    |||||||||||||||||||||||        |||||||| || |||||||||||||||| || |||  |||||||||||||||||||  |||||| ||||    
T  15475141 tccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatatatttagtattat-ttttttaggta 15475239  T
Q  271 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||| ||||| | |||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15475240 aaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 15475329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 126 - 419
Target Start/End: Original strand, 23142224 - 23142524
Alignment:
Q  126 tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt--------cttataaattaggtca 217  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||        ||||||||||| ||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  218 tttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattc 317  Q
    ||||||||||||||||||| ||||||||||||||||||||   ||||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  23142324 tttatgactatataccatttataacatatatttagtattattatttttgg-taaagtccatcgattttgattgcgattttacaatttcttatatcgattc 23142422  T
Q  318 tacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgac 417  Q
    |||||||||| |||| ||||||| ||||||||  ||||||||| |||   | | | |||||||||||||||||||  || | |||||||| |||||||||    
T  23142423 tacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgattaccggttttgctattccctttcgaattgaaataaagtcctgattttgac 23142522  T
Q  418 aa 419  Q
    ||    
T  23142523 aa 23142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 79 - 408
Target Start/End: Complemental strand, 19704583 - 19704247
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatcca-ggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||||||||||| ||||||||| |||||| || || ||||| ||||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  178 atccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    |||||||||||||||||||        |||||||||||||  | || ||||||||||||||||||||  ||||||||||||||| ||   |||||| |||    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaaccaagttatttatgactatataccatttgtaacatatatttagttttt--ttttttaggt 19704386  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgtt 369  Q
    ||||||||||||||| ||||| |||||||  |||||  ||||||||||||||| ||| |||||||||| ||||| |||||||||||||||| |||  ||     
T  19704385 aaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacgagtc 19704286  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtccc 408  Q
    | |||||||||||||||||| ||| || |||||| ||||    
T  19704285 ccgattttgctattccctttggacttgaagtaaaatccc 19704247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 78 - 419
Target Start/End: Complemental strand, 29384444 - 29384091
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||||||||||| |  |||||||||||||||   ||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaaa 29384345  T
Q  178 atccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtatta-----aattttt 264  Q
    || |||||| ||||||||        ||||||||||||||  |  |||||||||||||||||||||| ||||||||||||||||||||       |||||    
T  29384344 attcatcga-tttgattgcgattttacgatttcttataaaacaattcatttatgactatataccatttataacatatatttagtattagtattttttttt 29384246  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    | |||||||||||||||||| |||||||||||||| ||||| |||||  |||||||||||||  ||||||||||||||||||||||| |||||||| |||    
T  29384245 ttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 29384146  T
Q  365 -atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     ||  || |||||| || ||  ||||||||||| || ||| |||||||||||||||    
T  29384145 gattgtc-gatttttctcttttctttcgacctgaagcaaaatcccgattttgacaa 29384091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 77 - 360
Target Start/End: Original strand, 17646993 - 17647288
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||  ||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtca--tttatgactatataccattcataacatatatttagtatta--aattttt 264  Q
    ||| |||||||||||||||        ||||||||||||||    ||||  ||| | | |||||||||||  ||| ||||||||| | |||  | |||||    
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaacctagtcattttttttattatataccatttgtaaaatatatttaatgttattatttttt 17647192  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    | | |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  17647193 ttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgatt 17647288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 31424162 - 31424514
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||| |||||||||||| ||||||||| ||||||| |||||||||  |||||||||| | |||||||||| |||||||||| ||||||||||||||| ||    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagta----ttaaatttt 263  Q
    |||||||| |||||||||||        |||||||||||||| || ||| ||||||||||||||||| | |||||||||||||||||    ||   ||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatataccaattataacatatatttagtattttttttttttt 31424361  T
Q  264 ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgta 363  Q
    ||  |||||||| |||||||| |||||| ||||||| ||||| |||||| |||| |||| |||  ||||||||||||||    |||||||||||||| ||    
T  31424362 ttttgtaaaatctatcgatttggattgcaattttactatttcttatatcaattccacaagagtagttgagtaaaatcct---gttttgattgcgatttta 31424458  T
Q  364 c-atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | ||  || |||||||||  || ||||||||||| |||||| || ||||||||||||    
T  31424459 cgattgtc-gattttgctcatctctttcgacctgaagtaaaatctcgattttgacaa 31424514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 96 - 392
Target Start/End: Original strand, 32424354 - 32424656
Alignment:
Q  96 cttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattg 195  Q
    ||||||| |||||||  |||||||| ||||||| ||||   | ||||| | |||| ||||||||||||| ||||||||||||||  || |||||||||||    
T  32424354 cttaaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattg 32424450  T
Q  196 cgatttc--------ttataaattaggtcatttatgactatataccattcataacatat--atttagtattaaattttttgggtaaaatccatcgatttc 285  Q
    ||||||         ||||| | || ||||||||||||||||||||||| |||||||||  |||||||||||| |||| ||| ||||||| ||||||||     
T  32424451 cgattttacgatttattatatactaagtcatttatgactatataccatttataacatatatatttagtattaatttttctggataaaatctatcgatttt 32424550  T
Q  286 gattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattcc 385  Q
     ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||| |||  |||| || |||||||||||    
T  32424551 tattgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacgagttccga-tttgctattcc 32424649  T
Q  386 ctttcga 392  Q
    | |||||    
T  32424650 ccttcga 32424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 76 - 360
Target Start/End: Complemental strand, 22910332 - 22910041
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||| ||| || ||||||||||||||||||||||  ||||||||  |||||||||||| |||||||||| ||||| |||||||||||  ||||||| ||    
T  22910332 cattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggca 22910233  T
Q  176 aaatccatcgattttgattgcg--------atttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    |||||||| |||||||||||||        ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| | | |||||| |    
T  22910232 aaatccattgattttgattgcgattttaagatttcttataaattaagtaatttatgactatataccatttataacatatacttagtact-actttttttg 22910134  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
     ||||   |||||| || |||||||||||||| ||||| |||||||||||||||||| |  |||| ||||||||||| |||| | ||||||||    
T  22910133 ttaaacatcatcgactttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgatt 22910041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 6810861 - 6811110
Alignment:
Q  116 attttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt--------cttata 207  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||| ||||||| ||||||||||||| ||||||        | ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaatc-atcgattttgattacgattttacgatttcatata 6810959  T
Q  208 aattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcct 307  Q
    || || ||||||||| |||||||| |||| ||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||| ||||||| |    
T  6810960 aactaagtcatttataactatatatcatttataacatatatttagtatt-attttttttggtaaaatccatcgattttgattgcgatttt-caatttctt 6811057  T
Q  308 atatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||| |||||||||||||  |||| |||||| ||||||||||| ||||||||    
T  6811058 atatctattctacaaaagtagttgattaaaattcttcgattttggttgcgatt 6811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 74 - 311
Target Start/End: Complemental strand, 27836596 - 27836351
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    ||||||||||||||||| |  ||||| |||||||||| |||||||||| |  ||| |||||||||||| ||| |||||||||||||||| | ||||||      
T  27836596 accattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataag 27836497  T
Q  174 caaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    |||||| |||| ||||||||| | ||||        |||||||| || ||||||||||||||||||||||| ||||||| |||||||||||   ||||      
T  27836496 caaaattcatcaattttgattacaattttacaatttcttataaactaagtcatttatgactatataccatttataacatgtatttagtatttttttttgc 27836397  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatat 311  Q
     |||||||||||||||||| ||||| ||||||||||||||||||||    
T  27836396 tggtaaaatccatcgattttgattgtgattttacaatttcctatat 27836351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 81 - 350
Target Start/End: Complemental strand, 3094378 - 3094092
Alignment:
Q  81 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 180  Q
    ||||||||||  ||||||||||| |||||| ||||||||||  |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  181 catcgattttgattgcga------------------tttcttataaattaggtcatttatgactatataccattcataacatatatttagta-ttaaatt 261  Q
    ||||||||||||||||||                  |||  |||||| || ||||||||||||||||||||||| ||||||||||||||||| ||   ||    
T  3094278 catcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatataccatttataacatatatttagtatttttttt 3094179  T
Q  262 ttttgggtaaaatccatcgatttcgattgcga-ttttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgatttt 350  Q
    ||||  |||||||| ||| |||| |||||||| |||||||||||| |||||     ||||||||||  |||||||||||||||| |||||    
T  3094178 ttttttgtaaaatctatcaattttgattgcgatttttacaatttcttatat---gcctacaaaagtaattgagtaaaatccttcaatttt 3094092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 292 - 419
Target Start/End: Complemental strand, 24414193 - 24414066
Alignment:
Q  292 gattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcg 391  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||    |||||||||||||||||||    
T  24414193 gattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtctaaattttgctattccctttcg 24414094  T
Q  392 acctggagtaaagtcccgattttgacaa 419  Q
    || || |||||||| || ||||||||||    
T  24414093 acatgaagtaaagttccaattttgacaa 24414066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 215 - 360
Target Start/End: Complemental strand, 15761344 - 15761196
Alignment:
Q  215 tcatttatgact--atataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatat 311  Q
    ||||||||||||  |||||| ||| ||||||||||||||| ||||  ||| ||| |||||||||||||||||| |||||||||||||| | ||| |||||    
T  15761344 tcatttatgactctatatacaatttataacatatatttagcattatttttgttttggtaaaatccatcgattttgattgcgattttactacttcttatat 15761245  T
Q  312 cgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||    
T  15761244 cgattctacaaaagtaattgagtaaaatccttcgatttatattgcgatt 15761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatcc 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 2040354 - 2040464
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||  |||| |||||||||| || |||||||| || ||||||    
T  2040354 tcctacatcgattctacaaaagtccatgagtaaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcgacttgaagtaaa 2040453  T
Q  404 gtcccgatttt 414  Q
    |||||||||||    
T  2040454 gtcccgatttt 2040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 74 - 179
Target Start/End: Complemental strand, 15761571 - 15761466
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| || ||||||||||||| |||| ||||| | |||||||||||||     
T  15761571 accattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaatagg 15761472  T
Q  174 caaaat 179  Q
    ||||||    
T  15761471 caaaat 15761466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 76 - 180
Target Start/End: Complemental strand, 24056698 - 24056594
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||   ||||||||||||||||    
T  24056698 cattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagaca 24056599  T
Q  176 aaatc 180  Q
    |||||    
T  24056598 aaatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 81 - 296
Target Start/End: Complemental strand, 6292467 - 6292246
Alignment:
Q  81 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 180  Q
    |||| ||||| |||||||||||| ||||||  | |||||||||||||| |||| ||| ||||||| ||| |||||||| ||| | ||||||   |||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  181 catcgattttgattgcg--------atttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaa 272  Q
    || ||||||||||||||        |||| ||||||  || ||||||||| ||||||||||||| |||| ||||||||| ||||| ||||||  | ||||    
T  6292367 caacgattttgattgcggtcttacaatttattataatctaagtcatttatcactatataccatttataaaatatatttaatattatattttt--gataaa 6292270  T
Q  273 atccatcgatttcgattgcgattt 296  Q
    ||||||| ||||  ||||||||||    
T  6292269 atccatcaattttaattgcgattt 6292246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 416
Target Start/End: Complemental strand, 40541711 - 40541602
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtc 406  Q
    ||||||||||||||| |||| ||||| ||||||| ||| ||||||||||||||| |||  || | |||||||||| | ||||||||| || |||||||||    
T  40541711 tatatcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacgagtcccgattttgctacttcctttcgacttgaagtaaagtc 40541612  T
Q  407 ccgattttga 416  Q
    ||||||||||    
T  40541611 ccgattttga 40541602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 16752256 - 16752370
Alignment:
Q  302 tttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagta 401  Q
    ||||||| ||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||  || |  ||||||||| ||||||||||| || ||||    
T  16752256 tttcctacatcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacgagtcccaattttgctactccctttcgacttgaagta 16752355  T
Q  402 aagtcccgattttga 416  Q
    |||| || |||||||    
T  16752356 aagttccaattttga 16752370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 17566315 - 17566443
Alignment:
Q  286 gattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattc 384  Q
    |||||||||||||||||||| ||||||  ||||||||||||  ||||||||||| |||||||||||||||| ||| ||| || |||  |||||||| |||    
T  17566315 gattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttc-aattttgctcttc 17566413  T
Q  385 cctttcgacctggagtaaagtcccgatttt 414  Q
    ||||| |||||| || ||| ||| ||||||    
T  17566414 ccttttgacctgaagcaaaatcctgatttt 17566443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 269 - 419
Target Start/End: Complemental strand, 24056499 - 24056349
Alignment:
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgta-catg 367  Q
    ||||||| |||||||  |||||||||||||  ||||  ||||| |||||||||||| |  |||||||||||||||||||||||||| | ||| ||  ||     
T  24056499 taaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttcgattttgattaccattttatgata 24056400  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||  |||||||| ||||||||||||||| || ||| || || |||||||||    
T  24056399 ttc-aattttgctcttccctttcgacctgaagcaaaatctcggttttgacaa 24056349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 15231838 - 15231912
Alignment:
Q  286 gattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||||||||||||  ||||||||||||||||||||  |||||||||||| | |||||||  ||||||||    
T  15231838 gattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgatt 15231912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 576
Target Start/End: Complemental strand, 9217291 - 9217206
Alignment:
Q  491 agatggaaattgtcccgatcagattgcgaatagcagttaaccaattacctctttgcctgcccacaaaacaaggaaggtggtgctat 576  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||| || | | || ||| |||||||||||| ||| |||||||||    
T  9217291 agatgaaaattgtcccgttcagattgcgaatagcaattaaccaatcacatttctgtctggccacaaaacaagaaagatggtgctat 9217206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 23136344 - 23136393
Alignment:
Q  72 caaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttg 121  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  23136344 caaccattattgtcaaaatcccgacttaaatcctaaaattcaggattttg 23136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 7262006 - 7262086
Alignment:
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgac 393  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||| |||  || | |||||||||| | |||||||||    
T  7262006 gattctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgctacttcctttcgac 7262086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 27836181 - 27836137
Alignment:
Q  316 tctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  27836181 tctacaaaagtccttgagtaaaatccttcgattttgattgcgatt 27836137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 8582241 - 8582314
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatc 340  Q
    |||||||| ||||||||| |||||  ||||||| ||||| |||||| |||||||||||||  ||||||||||||    
T  8582241 ggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 15231733 - 15231848
Alignment:
Q  86 aaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 185  Q
    |||||| ||| |||||||||||| |  | ||||||| ||  ||||||||||||||||||| |||| |||| || ||||  ||||||| ||||||||| |     
T  15231733 aaaatctcgatttaaatcctaaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaaca 15231832  T
Q  186 attttgattgcgattt 201  Q
      ||||||||||||||    
T  15231833 tatttgattgcgattt 15231848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 419
Target Start/End: Original strand, 19335241 - 19335325
Alignment:
Q  334 taaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||| ||||||||||||| ||||||| | ||||  ||||| ||||| | ||| |||||  ||||||||||||||||||||||    
T  19335241 taaaatccatcgattttgattgtgattgtaga-gttccaattttactatttctttttgacctaaagtaaagtcccgattttgacaa 19335325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 9212295 - 9212202
Alignment:
Q  166 aaaatagacaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatattta 251  Q
    |||||||  |||||||||||||||||||||||||||        |||||||| ||  ||||||||||| |||||||||| ||||| ||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatataccatttataacctatattta 9212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 17788436 - 17788372
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaa 140  Q
    |||||||||||||||| | ||||||||  ||||||| ||||||||| ||||||  ||||||||||    
T  17788436 cattgttgtcaaaatcgcaacttaaattttaaaatctaggattttgagactttactcaccttcaa 17788372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 27672347 - 27672303
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggatt 118  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||    
T  27672347 accattgttgccaaaatcccgacttaaattctaaaatccaagatt 27672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 1018167 - 1018060
Alignment:
Q  213 ggtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatat 311  Q
    |||||||||||||||||||  ||| |||||||| |||||  ||||  ||| ||| |||| |||| |||||||| ||||||| |||| | || || |||||    
T  1018167 ggtcatttatgactatatataatttataacatacatttaacattatttttattttggtagaatctatcgattttgattgcgcttttgcgatatcttatat 1018068  T
Q  312 cgattcta 319  Q
    ||||||||    
T  1018067 cgattcta 1018060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Complemental strand, 9036801 - 9036758
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttg 121  Q
    |||||||||||| || ||||||||||||||||| ||||||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttg 9036758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 77 - 416
Target Start/End: Complemental strand, 15528239 - 15527892
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||  |||||||||||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  177 aatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    ||||||||||||| |||||||||||        |||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  15528139 aatccatcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatataccatttataacatatatttagtattaaattttttggg 15528040  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |  ||    
T  15528039 ggaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagt 15527940  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttga 416  Q
    || |||||||||||| |||||||||||| |||||||||  ||||||||    
T  15527939 tccgattttgctatttcctttcgacctgaagtaaagtcaggattttga 15527892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 77 - 419
Target Start/End: Complemental strand, 26053425 - 26053075
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||| |||| |||| |||||||||||||||  |||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||||||| ||||||||||        |||||||||||||| || || |||||||||||||||||||| |||||||||| |||||||||   ||||| ||    
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatatagttagtattattattttttgg 26053226  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||| |||| |||  ||    
T  26053225 taaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagt 26053126  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     |  ||||||||||| |||||||||||| |||||||||| |||||||||||    
T  26053125 cccaattttgctatttcctttcgacctgaagtaaagtcctgattttgacaa 26053075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 77 - 419
Target Start/End: Complemental strand, 26073478 - 26073128
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||| |||| |||| |||||||||||||||  |||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||||||| ||||||||||        |||||||||||||| || || |||||||||||||||||||| |||||||||| |||||||||   ||||| ||    
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatatagttagtattattattttttgg 26073279  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||| |||| |||  ||    
T  26073278 taaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagt 26073179  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     |  ||||||||||| |||||||||||| |||||||||| |||||||||||    
T  26073178 cccaattttgctatttcctttcgacctgaagtaaagtcctgattttgacaa 26073128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 17103201 - 17103545
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| |||       || |||||||||| |||| ||||||||||||||||||||||||    
T  17103201 cattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatagaca 17103293  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||| ||||        |||||||||| || || ||||| ||||||||| |||| || ||||||||||| |||||| |||||| |    
T  17103294 aaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgactatatatcatttatgacatatatttattattaatttttttag 17103393  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| |||  |    
T  17103394 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgag 17103493  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | ||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  17103494 tcctgattttgttattccctttcgacttgaagtaaagtcccgattttgacaa 17103545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 74 - 419
Target Start/End: Original strand, 19748330 - 19748683
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| || |||| |||||| ||||||||||  |||||||     
T  19748330 accattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaatagg 19748429  T
Q  174 caaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    |||||| |||||||||||||||        |||||||||||||| || |||||||| ||||||||| |||| |||| |||||||||||||||   ||||     
T  19748430 caaaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatcatttataaaatatatttagtattattattttc 19748529  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 365  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||     
T  19748530 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacg 19748629  T
Q  366 tgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
      | | ||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  19748630 aatcccgattttgctattccctttcaacctgaattaaagtcccgattttgacaa 19748683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 7223518 - 7223865
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||       ||||||||||||||||||| ||||||||  ||    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatt----tagtattaaatttt 263  Q
    ||||||||||||||||||||||||||        |||||||| || ||||||||||||||||||||||| ||||||||||||    ||||||||  || |    
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattaatttagtattattttgt 7223710  T
Q  264 ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgta 363  Q
    |||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||    
T  7223711 ttgg-taaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaatttta 7223809  T
Q  364 catgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |  || | ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7223810 cgagtcccgattttgctattccctttcgacctgaagtaaagtcccgattttgacaa 7223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 27233407 - 27233078
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  176 aaatccatcgattttgattgcgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatc 275  Q
    |||||||||||||||||||||||||  |||         | |||| |   ||||||||||| ||||||||||||||||||||   ||||  |||||||||    
T  27233307 aaatccatcgattttgattgcgatt--tta---------tgatttct---tatataccatttataacatatatttagtattattgttttatggtaaaatc 27233222  T
Q  276 catcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgatt 375  Q
     |||||||| ||||||||||||||||||| ||||| ||||||||| ||||  ||||||||||||||||| ||||||||||||||| ||   || | ||||    
T  27233221 tatcgattttgattgcgattttacaattttctatagcgattctactaaagaccttgagtaaaatccttcaattttgattgcgattttatgagtcccgatt 27233122  T
Q  376 ttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||  ||||||||| |||||| ||||||| | ||||||||||||    
T  27233121 ttgtcattcccttttgacctgaagtaaaggctcgattttgacaa 27233078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 17543870 - 17543509
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||| |||||||||| |||||||||||||||||  ||||||  ||    
T  17543870 cattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagca 17543771  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaa-attttttg 266  Q
    ||||| || |||||||||||||||||        |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||  |||||||     
T  17543770 aaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatataccatttataacatatatttagtattattattttttt 17543671  T
Q  267 ---------ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcg 357  Q
             |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  17543670 tttatttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcg 17543571  T
Q  358 attgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||| ||   || | |||||||||||||| |||||||||| ||||||||||| ||||| ||||    
T  17543570 attttatgagtcccgattttgctattccttttcgacctgaagtaaagtcccaattttaacaa 17543509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 76 - 421
Target Start/End: Original strand, 23897810 - 23898162
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||  || |||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| |||||||||||| ||| | ||||||| |     
T  23897810 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 23897909  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||||||||        |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||   |||||| |    
T  23897910 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattttttttttttg 23898009  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-at 366  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||| || ||||| ||| ||    
T  23898010 gtaaaatccatcgattttgattgagattttacaatttcttatatcgattctac-aaagtagttgagtaaaatccttcgattttggtttcgattttacgat 23898108  T
Q  367 gttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
      || ||||||||| ||| | ||||||||| || ||| |||||||||||||||||    
T  23898109 tgtc-gattttgctcttctcattcgacctgaagcaaaatcccgattttgacaatc 23898162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 11327701 - 11327341
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| |  |||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagt-atta--------a 258  Q
    |||| |||||||||| ||||||||||        ||||| || ||  |||||||||||| ||||||||| || |||| |||||| | ||||        |    
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacatgtatttatttattatttatttta 11327502  T
Q  259 attttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcga 358  Q
     |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11327501 ttttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcga 11327402  T
Q  359 ttgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    || |||  ||   ||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  11327401 ttttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgattttgacaa 11327341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 77 - 416
Target Start/End: Original strand, 17250057 - 17250404
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    ||| ||| |||||||||||        |||||||||||||| || ||||||||||||||||||  ||| |||| ||||||||| || ||   ||||| ||    
T  17250157 aattcattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatata-aatttataatatatatttattactattgttttttgg 17250255  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttc--gattttgattgcgattgtacat 366  Q
    |||||||||| ||||| |||||||| |||||||||| ||||  ||||||||| ||||  |||||||||||||||||   ||||||||||||||| |||      
T  17250256 taaaatccattgattttgattgcgaatttacaattttctatggcgattctactaaagaccttgagtaaaatccttctttattttgattgcgattttacga 17250355  T
Q  367 gttctgattttgctattccctttcgacctggagtaaagtcccgattttga 416  Q
    | ||  | || || ||| |||||||||||| |||||||||||||||||||    
T  17250356 g-tcccaattcgccatttcctttcgacctgaagtaaagtcccgattttga 17250404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 203 - 419
Target Start/End: Complemental strand, 7918343 - 7918129
Alignment:
Q  203 ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaat 302  Q
    |||||||||| |||||||||||||||||| |||| |||||||| |||||||||||  |||||| |||||||||||||||||| |||||||||||||||||    
T  7918343 ttataaattaagtcatttatgactatatatcatttataacataaatttagtatta--tttttttggtaaaatccatcgattttgattgcgattttacaat 7918246  T
Q  303 ttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaa 402  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||| |||  || |||||| |||||||||||||||||||| |||||    
T  7918245 ttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgacctgaagtaa 7918146  T
Q  403 agtcccgattttgacaa 419  Q
    || ||||||||||||||    
T  7918145 agccccgattttgacaa 7918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 30912542 - 30912185
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  176 aaatccatcgattttgattgcg--------atttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt-tg 266  Q
    |||||||| |||||||||||||        |||||||||||| || ||||||||||| |||||| |||| || |||||||||||||||||  ||||| ||    
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatcatttatcacatatatttagtattatttttttgtg 30912343  T
Q  267 g-----gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    |     ||||||||||||||||  |||||||||| ||  ||||| |||||||||| |||||||||  |||| ||||||||||| |||||| ||| ||||     
T  30912342 gtaaaagtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagattt 30912243  T
Q  362 tac-atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||| ||  || ||||||||||||| ||||| ||||| || ||| | |||||||||||||    
T  30912242 tacgattatc-gattttgctattctctttcaacctgaagcaaaattccgattttgacaa 30912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 73 - 299
Target Start/End: Original strand, 21354744 - 21354970
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    ||||||||||||||||||||| |||||||||||||||||| |||        ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21354744 aaccattgttgtcaaaatcccaacttaaatcctaaaatcctgga--------ctttctttaccttcaacgacttaaatccatggtagaatcccaaaatag 21354835  T
Q  173 acaaaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt 264  Q
    ||||||||||||| |||| ||||||||        |||||||||| || || |||||||||||||||||||| |||||||||||||||||||||||| ||    
T  21354836 acaaaatccatcgttttttattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatatatttagtattaaattatt 21354935  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||| |||||||||||||| ||||||||||||||    
T  21354936 tgggtgaaatccatcgattttgattgcgattttac 21354970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 260 - 419
Target Start/End: Complemental strand, 22498378 - 22498219
Alignment:
Q  260 ttttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||    
T  22498378 ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgat 22498279  T
Q  360 tgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | |||  || |  |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  22498278 tttacgagtcccaattttgctattccctttcgacctgaagtaaagtcccaattttgacaa 22498219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 6943590 - 6943465
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  6943590 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagaca 6943491  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    |||| |||||||||||||||||||||    
T  6943490 aaattcatcgattttgattgcgattt 6943465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 73 - 326
Target Start/End: Complemental strand, 10509156 - 10508889
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    ||||||| |||||||||||| ||||||||||||||||| ||| | ||||||||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  10509156 aaccattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaatag 10509057  T
Q  173 acaaaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatatac------cattcataacatatatttagtatta- 257  Q
     |||||| |||||||||||||| ||||        || ||||||| || ||||||||| |||||||||      |||| |||||||||||||| |||||     
T  10509056 gcaaaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacctaagtcatttataacatatatttattattat 10508958  T
Q  258 aattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagt 326  Q
     ||| ||| | ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  10508957 tattattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagt 10508889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 77 - 241
Target Start/End: Complemental strand, 7918510 - 7918338
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||| || |||  |||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  177 aatccatcgattttga--------ttgcgatttcttataaattaggtcatttatgactatataccattcataa 241  Q
    |||| |||||||||||        ||||||||| |||||||||| |||||||||||||||||| |||| ||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcatttataa 7918338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 267 - 419
Target Start/End: Complemental strand, 3573831 - 3573678
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacat 366  Q
    |||||||  ||||||||| |||||||||||||||||||| |||||| ||||||||| |||  ||||||||| |||| ||||||||||||||||| |||      
T  3573831 ggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttacga 3573732  T
Q  367 gttctgattttgctattccc-tttcgacctggagtaaagtcccgattttgacaa 419  Q
    || ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3573731 gtcctgattttgctattcccttttcgacctgaagtaaagtcccgattttgacaa 3573678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 22499006 - 22498848
Alignment:
Q  85 caaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatc 184  Q
    ||||||||| ||| |||||||||| ||||  |||||| ||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||    
T  22499006 caaaatcccaactaaaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatc 22498907  T
Q  185 gattttgattg--------cgatttcttataaattaggtcatttatgactatataccat 235  Q
    |||||| ||||        ||||||||||||||  | ||||||||||||||||||||||    
T  22498906 gattttaattgcaattttacgatttcttataaacgaagtcatttatgactatataccat 22498848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 18491169 - 18491063
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||   |||| |||||||||||||||| |||||||||| ||||||||||||  ||    
T  18491169 accattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaactga 18491070  T
Q  174 caaaatc 180  Q
    |||||||    
T  18491069 caaaatc 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 80 - 354
Target Start/End: Complemental strand, 2912373 - 2912105
Alignment:
Q  80 gttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 179  Q
    |||||||||||||||||||||||| ||||||  |||||||||  ||||||| || ||||||||| | |||| ||||||||||||  ||||||  ||||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaataagcaaaat 2912275  T
Q  180 ccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaa 271  Q
     |||||||||||||||        |||||| |||||||  | |||||||||||||           || |||| ||  ||||||| | ||||||  ||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaacaaagtcatttatgact-----------atgacatgta-ctagtatt-atttttttatgtaa 2912188  T
Q  272 aatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 354  Q
    ||||| ||||||| |||||||||||||||||||| |||| | |||||||||||||  |||||||||||||||| |||| ||||    
T  2912187 aatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgatt 2912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 292 - 419
Target Start/End: Complemental strand, 27614562 - 27614435
Alignment:
Q  292 gattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcg 391  Q
    |||||||||||||||||||| | ||||||  ||||  ||||||||||||||||||||||||||| |||| |||  || | |||||| |||||||||||||    
T  27614562 gattttacaatttcctatattgtttctactcaagtcattgagtaaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcg 27614463  T
Q  392 acctggagtaaagtcccgattttgacaa 419  Q
    ||||| |||||| |||  ||||||||||    
T  27614462 acctgaagtaaattcctaattttgacaa 27614435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 27890621 - 27890736
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||  ||||  ||||| ||| |||||||| || || ||||||    
T  27890621 tcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttacgagttccaattttactactccctttcaacttgaagtaaa 27890720  T
Q  404 gtcccgattttgacaa 419  Q
    ||| ||| ||||||||    
T  27890721 gtctcgaatttgacaa 27890736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 4841760 - 4841667
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||| ||||||||| |||||||||||||| ||||| |||  |||||||||||||||  ||||||||||||||| ||||||||||| ||||    
T  4841760 ggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatt 4841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 5422880 - 5422798
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatag 156  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||  ||||| |||||||||||||||| ||||| ||||    
T  5422880 accattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccat 154  Q
    |||| ||||||| ||||||||||| ||||||||||| |||| | ||||||||||||||||||||||| ||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 304 - 418
Target Start/End: Original strand, 31108390 - 31108504
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| ||| ||| ||||||||| ||| ||||||||| || ||||||||||||| || |||   |   ||||||||||||||||||||||||| ||||||    
T  31108390 tcctacatctattgtacaaaagtcctttagtaaaatcttttgattttgattgcggttttacgaatctcgattttgctattccctttcgacctgaagtaaa 31108489  T
Q  404 gtcccgattttgaca 418  Q
    |||| ||||||||||    
T  31108490 gtcctgattttgaca 31108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 33583855 - 33583766
Alignment:
Q  80 gttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    |||||||||||| |||||||| ||| |||||||||||||||  ||||||  | | ||||||||||| |||||||||| |||| |||||||    
T  33583855 gttgtcaaaatcgcgacttaagtcccaaaatccaggatttttagactttaattagcttcaacgactcaaatccatagcagaaacccaaaa 33583766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 4842026 - 4841946
Alignment:
Q  97 ttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 179  Q
    ||||||||||||||   |||||||| |||||| |||||||||||||||| |||||| ||| ||||||||| ||||| ||||||    
T  4842026 ttaaatcctaaaatt--ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaat 4841946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 21354942 - 21355025
Alignment:
Q  336 aaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||| |||||||||||||||||| |||  || |||||||| |||||||||||| || || |||||| |||| ||||||||||    
T  21354942 aaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaatcccaattttgacaa 21355025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 10958320 - 10958239
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccat 154  Q
    ||||||||||||||||||| |||||||||||  ||||| |||||||||| |||||   |||||||||| || | ||||||||    
T  10958320 aaccattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaaggattcaaatccat 10958239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 18490987 - 18490910
Alignment:
Q  104 ctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 181  Q
    ||||||||||| ||||||  ||||| |||||||||||||||| ||| |||||| | ||||||||||  ||||||||||    
T  18490987 ctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaaatgacaaaatcc 18490910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 307 - 419
Target Start/End: Complemental strand, 33583557 - 33583445
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgatt-ttgctattccctttcgacctggagtaaagt 405  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||  |||| |||   ||  |||| ||||||  ||||||||||| | |||||| |    
T  33583557 tatatcgattctacaaaagtccttaagtaaaat-cttcgattttgattttgattttacgatttacgattattgctaacccctttcgaccggaagtaaaat 33583459  T
Q  406 cccgattttgacaa 419  Q
    ||||||||||||||    
T  33583458 cccgattttgacaa 33583445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 8275415 - 8275368
Alignment:
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  8275415 gattttacaaaagtccttgagtaaaatccttcgattttaattgcgatt 8275368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 8285843 - 8285760
Alignment:
Q  86 aaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    |||||| |||||||| |||||||||||||||||||| |||||  |  | ||||||||||| ||||||| || | ||||||||||    
T  8285843 aaaatcgcgacttaagtcctaaaatccaggattttgcgacttgatctagcttcaacgactcaaatccacagcaaaatcccaaaa 8285760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 4596747 - 4596661
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttc 390  Q
    ||||||||| |||||| ||||||  ||||||| |||||||| ||||||||||| ||| ||||  || | ||||||||| ||||||||    
T  4596747 tcctatatcaattctagaaaagtaattgagtagaatccttcaattttgattgcaattttacaattttttattttgctactccctttc 4596661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 33593044 - 33592928
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggagtaa 402  Q
    ||||||||| |||||||||||||  ||||||||| || |||||||| |||||| ||| ||| || |||  |||||| |||||||||||||  || || ||    
T  33593044 tcctatatcaattctacaaaagtagttgagtaaa-tcattcgatttcgattgcaattttacgattttca-attttgttattccctttcgatatgaagcaa 33592947  T
Q  403 agtcccgattttgacaatc 421  Q
    | |||||||||||||||||    
T  33592946 aatcccgattttgacaatc 33592928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  104 ctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    ||||||||||| ||||||  ||||| ||||||||||| |||| |||||||||| ||||||| ||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 20432486 - 20432406
Alignment:
Q  305 cctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattcc 385  Q
    |||||||||||||||||||| |  || |||||||| |||| ||||||||||||||| ||| || ||| ||||||||||||||    
T  20432486 cctatatcgattctacaaaactagttaagtaaaattcttcaattttgattgcgattttacgattttc-gattttgctattcc 20432406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 8545087 - 8545019
Alignment:
Q  84 tcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatcc 152  Q
    |||||||||||| ||||||||||||||  ||||||||| ||||||  |||| |||||| | ||||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgactttactcactttcaacaatttaaatcc 8545019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 1179068 - 1179114
Alignment:
Q  313 gattctacaaaagttcttgagtaaaatccttc-gattttgattgcga 358  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||    
T  1179068 gattctacaaaagtagttgagtaaaatccttcagattttgattgcga 1179114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 23506102 - 23506192
Alignment:
Q  329 ttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||| ||||||||||||||||| |||| |||| ||||  ||  ||||||||||||| |||||||| |  |||||| |||| |||| |||||    
T  23506102 ttgactaaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttcgacttaaagtaaaatccccatttcgacaa 23506192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 27890519 - 27890603
Alignment:
Q  215 tcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    |||||||||||||||| | ||| ||||||||||||||| ||||  ||| ||| |||| ||| | ||||||| ||||||||||||||    
T  27890519 tcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaattc-tcgattttgattgcgattttac 27890603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 78 - 419
Target Start/End: Original strand, 18843716 - 18844065
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||| ||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  178 atccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    || ||||||||||||||||        ||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaactaagtcatttatgattatataccatttataacatatatttagtattaatttttttgggt 18843915  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgtt 369  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||||| |||  ||     
T  18843916 aaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtc 18844015  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18844016 ccgattttgctattccctttcgacctgaagtaaagttccgattttgacaa 18844065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 76 - 417
Target Start/End: Original strand, 19578941 - 19579292
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  176 aaatccatcgattttgattgcga--------tttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttg- 266  Q
    |||||||||||||||||||||||        ||||||||||| || ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||      
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttaccattcataacatatatttggtattatttttttttt 19579140  T
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacat 366  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||       
T  19579141 ggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgattttatga 19579240  T
Q  367 gttctgattttgc-tattccctttcgacctggagtaaagtcccgattttgac 417  Q
    || |  ||||||| || |||||||||||||| |||||| |||||||||||||    
T  19579241 gtcccaattttgcttactccctttcgacctgaagtaaaatcccgattttgac 19579292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 77 - 419
Target Start/End: Original strand, 43234868 - 43235218
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||||||||||||||||||        ||||||||||| || || |||||||||| ||||| |||||| |||||||||| ||| |||||   | ||| ||    
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaaccatttataacatatacttactattattatcttttgg 43235067  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    ||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||    
T  43235068 taaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagt 43235167  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     |||||||||||||||||||||| |  | ||||||||||| ||||||||||    
T  43235168 actgattttgctattccctttcgtctcgaagtaaagtcccaattttgacaa 43235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 76 - 417
Target Start/End: Complemental strand, 18051660 - 18051314
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| ||||| |||||||||| | ||||||| ||    
T  18051660 cattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggca 18051561  T
Q  176 aaatccatcgattttgattgcgatt--------tcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    |||||||||||||||||||||||||        ||||||||| || |||||||||||| |||||  ||| ||||||||||||||||||||   ||||| |    
T  18051560 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atata--atttataacatatatttagtattattattttttg 18051464  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    || |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | |||||| ||| |||||||||||||||| |||| |    
T  18051463 gttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagtccttcaataaaattctttgattttgattgcgattctacaag 18051364  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgac 417  Q
    | | |||||| |||||||||||||||||  |||||| |||||||||||||    
T  18051363 tcccgatttttctattccctttcgacctaaagtaaaatcccgattttgac 18051314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 78 - 360
Target Start/End: Complemental strand, 23172560 - 23172266
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  178 atccatcgat----tttgattgcgatttc--------ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    || |||||||    |||||| |||||||         ||||||| || |||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatataccatttgtaacatatatttaatattaattttttt 23172361  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  23172360 gggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacgatt 23172266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 88 - 419
Target Start/End: Complemental strand, 41688782 - 41688445
Alignment:
Q  88 aatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgat 187  Q
    |||||| |||||||||||||||| | ||||||||  | |||||||||||||||||||||||||  |||||| ||| | ||||||  |||||| |||||||    
T  41688782 aatcccaacttaaatcctaaaattc-ggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgat 41688684  T
Q  188 tttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatc 279  Q
    ||||||||||||||        |||||||| ||  |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||    
T  41688683 tttgattgcgattttacgatttcttataaactaaatcatttataactatataccattcataacatatatttagtattattttttttgg-taaaattcatc 41688585  T
Q  280 gatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgc 379  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||   || | ||||||||    
T  41688584 gattttgattgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgc 41688485  T
Q  380 tattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||| |||  ||||||||||||||||||||||    
T  41688484 tattccctttcgtcctaaagtaaagtcccgattttgacaa 41688445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 126 - 419
Target Start/End: Original strand, 20320992 - 20321293
Alignment:
Q  126 tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt-------cttataaattaggtcat 218  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||| ||||| |||| | ||||||||||||||       |||||||| || |||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacgattcttataaactaagtcat 20321091  T
Q  219 ttatgactatataccattcataacatatatttagtattaaattttt-tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattc 317  Q
    ||||||| ||||| |||| |||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20321092 ttatgaccatatatcatttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatatagattc 20321191  T
Q  318 tacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgac 417  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||| ||   || | |||||| ||||||| ||| |||||| ||||||||||| ||||||||    
T  20321192 tacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcccgattttactattcctttttgacctgaagtaaagtcccaattttgac 20321291  T
Q  418 aa 419  Q
    ||    
T  20321292 aa 20321293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 73 - 360
Target Start/End: Complemental strand, 21059288 - 21058994
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||    
T  21059288 aaccattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaatag 21059190  T
Q  173 acaaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt 264  Q
     |||||| |||||||||||||||        ||||||||||||||  | |||||||||||||||| |||||| |||||||||||||||||||   |||||    
T  21059189 gcaaaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaaccatttataacatatatttagtatt--tttttt 21059092  T
Q  265 tg-ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagt-aaaatccttcgattttgattgcgatt 360  Q
    ||  ||||||||||||||||| ||||||||||||| |||||| |||||  |||||||||||||  || ||| |||||| |||||||||| ||||||||    
T  21059091 tgttgtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttggttgcgatt 21058994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 85 - 419
Target Start/End: Complemental strand, 27340307 - 27339966
Alignment:
Q  85 caaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatc 184  Q
    ||||||||||||||||||| ||||||  | ||||||| ||||||||||| ||||||||||| ||||| |||||||||||  ||||||| |||||| ||||    
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  185 gattttgattgcg--------atttcttataaattaggtcatttatgactatataccattcataacatatatttagtatta-aat--tttttgggtaaaa 273  Q
    ||||||||||| |        |||||||||||| || ||||||    |||||||||||||  |||||||||||||||||||  ||  |||||  ||||||    
T  27340207 gattttgattgagattttaatatttcttataaactaagtcatt----actatataccatttgtaacatatatttagtattattattatttttttgtaaaa 27340112  T
Q  274 tccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctg 372  Q
    || |||||||| |||||||||||||  ||||| |||||| ||||||||||||| | |||||||||||||||||||||||||||||||  || || ||| |    
T  27340111 tctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattttc-g 27340013  T
Q  373 attttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||||||||| || || |||||||| |||||||||||||    
T  27340012 attttgctattccctttcaacttgaagtaaagttccgattttgacaa 27339966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 77 - 360
Target Start/End: Complemental strand, 38158383 - 38158102
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| || |||||| ||| ||||||| ||||||||||||||||||||||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    ||||||| ||||||| |||        |||||||||||||| ||  ||||||||||||||         ||||||||||||||||||| | |||||| ||    
T  38158283 aatccattgattttggttgttattttacgatttcttataaactaaatcatttatgactat---------ataacatatatttagtatt-attttttttgg 38158194  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||| |||| ||||| |||||||||||||| || || |||||||||||| |  ||||||||||||||||||||||| ||||||||    
T  38158193 taaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgattttggttgcgatt 38158102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 75 - 419
Target Start/End: Complemental strand, 22645850 - 22645506
Alignment:
Q  75 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 174  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||       
T  22645850 ccattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagt 22645751  T
Q  175 aaaatccatcgattttgattgcg--------atttcttataaa-ttaggtcatttatgactatataccattcataacatatatttagtatt-aaattttt 264  Q
    ||| |||||| ||||||||||||        |||||||||||| | | |||||||||||||||||||    |||||||||| |||||| ||    |||||    
T  22645750 aaattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatatac----cataacatatgtttagtcttgtttttttt 22645655  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    | |||||||| ||||||||| ||||| ||||||||||||||||||||      |  | ||||  |||||||||||||||||||||||||||| ||| |||    
T  22645654 ttggtaaaattcatcgattttgattgtgattttacaatttcctatat------tgtagaagtctttgagtaaaatccttcgattttgattgcaattttac 22645561  T
Q  365 atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
      ||    ||||||||||||||||| |||| | |||||||| |||| ||||||||    
T  22645560 gagtctcaattttgctattccctttagaccagaagtaaagttccgactttgacaa 22645506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 77 - 201
Target Start/End: Original strand, 20923718 - 20923842
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  177 aatccatcgattttgattgcgattt 201  Q
    | |||||||||||||||||||||||    
T  20923818 agtccatcgattttgattgcgattt 20923842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 221 - 419
Target Start/End: Complemental strand, 19042404 - 19042207
Alignment:
Q  221 atgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctac 320  Q
    |||||||||||| |||  ||||||||||||||||||||  ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  19042404 atgactatatacaatttctaacatatatttagtattaatctttttggataaaatccatcaattt-gattgcgattttacaatttcctatatcgattctac 19042306  T
Q  321 aaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||| ||| |||||||| |||||||||| |||| |||| |||  || |  ||||||||||| ||||||||||| ||| ||||||| ||| |||||||    
T  19042305 aaaagtccttaagtaaaattcttcgattttaattgtgattttacgagtccctattttgctatttcctttcgacctagagcaaagtcctgatattgacaa 19042207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 217 - 419
Target Start/End: Complemental strand, 43005841 - 43005638
Alignment:
Q  217 atttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgat 315  Q
    |||||||| | ||||| ||| ||||||||||||||| ||||  ||| ||| |||| |||||||||||||  ||||||||||||| |||||||||||||||    
T  43005841 atttatgagtgtatacaatttataacatatatttagcattatttttgttttggtacaatccatcgattttaattgcgattttacgatttcctatatcgat 43005742  T
Q  316 tctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttg 415  Q
    ||||||||||   |||||||||||| ||| ||||||||||||||| ||||  ||  || ||| ||||| |||||||| ||  || ||| |||||||||||    
T  43005741 tctacaaaagaagttgagtaaaatctttcaattttgattgcgattttacaattttcgaattttctatttcctttcgatctaaagcaaaatcccgattttg 43005642  T
Q  416 acaa 419  Q
    ||||    
T  43005641 acaa 43005638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 41427654 - 41427769
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||  || | |||||||||| |||||||||||  | ||||||    
T  41427654 tcctatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgactcgaagtaaa 41427753  T
Q  404 gtcccgattttgacaa 419  Q
    ||| ||||||||||||    
T  41427754 gtctcgattttgacaa 41427769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 126 - 312
Target Start/End: Original strand, 19979648 - 19979848
Alignment:
Q  126 tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgat--------ttcttataaattaggtca 217  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||| |  |||||||||| |||||||||||||||        |||||||||| || ||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  218 tttatgactatataccattcataacatatatttagtatta-------aattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctata 310  Q
    ||||||||||||||||||| |||||||||||||| |||||        ||| ||| |||||||||||||||||| ||||| | |||||||||||| ||||    
T  19979748 tttatgactatataccatttataacatatatttattattattattattattattttggtaaaatccatcgattttgattgtg-ttttacaatttcttata 19979846  T
Q  311 tc 312  Q
    ||    
T  19979847 tc 19979848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 314 - 416
Target Start/End: Complemental strand, 15051981 - 15051879
Alignment:
Q  314 attctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattt 413  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||  || | |||||||||| ||| ||||||| || ||||||||||||||||    
T  15051981 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcgacttgaagtaaagtcccgattt 15051882  T
Q  414 tga 416  Q
    |||    
T  15051881 tga 15051879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 214 - 419
Target Start/End: Original strand, 26021465 - 26021661
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaa-attttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||  ||| ||| |||||||| ||||| ||   |||| |||||||| ||||| ||||||    
T  26021465 gtcatttatgactatatacaatttataacatatatttagcattattattgttttggtaaaatgcatcgttta--attgtgattttacgatttcttatatc 26021562  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgatt 412  Q
    |||  |||| ||||  |||||||||||||| |||||||||||| ||||       ||| ||||||||| |||||||| | |||| || ||| ||||||||    
T  26021563 gatgttacacaagtagttgagtaaaatcctacgattttgattgtgatt-------ttc-gattttgctcttcccttttggcctgaagcaaaatcccgatt 26021654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatc 151  Q
    ||||||||||||||| |||||||| |||||||  | ||||||||||||||||||||||||||||||| |||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 214 - 395
Target Start/End: Original strand, 24648161 - 24648335
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||||||||||| ||| |||| |||||||||| ||||  | | |||  |||||||||| |||||| ||||||||||||         |||||     
T  24648161 gtcatttatgactatatacaatttataatatatatttagcattatttatgttttagtaaaatccaccgattttgattgcgattttt--------tatatt 24648252  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacct 395  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| || ||| |||||| || ||||||||||||||    
T  24648253 gattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttc-gattttactcttccctttcgacct 24648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 355
Target Start/End: Original strand, 19377841 - 19377889
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattg 355  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19377841 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattg 19377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 22984695 - 22984643
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  22984695 tcctatatcgattctacaaaattccttgagtaaaatccttcgattttgattgc 22984643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 6852392 - 6852345
Alignment:
Q  372 gattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  6852392 gattttgctattccctttcgacctgaagtgaagtcccgattttgacaa 6852345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacga 143  Q
    ||||||||||||||| || |||||||||||||  | |||||||  ||||||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 13342116 - 13342024
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    |||||||||||||||| ||| |||||||  ||||||||||||||| |||||||  ||||||||| |||   |||||||| | ||||||| ||||    
T  13342116 cattgttgtcaaaatcgcgatttaaatcgcaaaatccaggatttt-tgactttactcaccttcatcgatccaaatccattgcagaatccaaaaa 13342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 24106645 - 24106714
Alignment:
Q  81 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaat 150  Q
    |||||||||||| || ||||||| |||||| ||||||||||  ||||||||||||  |||||||| ||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 13341591 - 13341476
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggagtaa 402  Q
    |||||||||||||||||||||||  | ||||||| |||||| |||| | |||||||| ||| || ||   ||||| ||||||||||||||  || || ||    
T  13341591 tcctatatcgattctacaaaagtagtcgagtaaa-tccttcaatttcgtttgcgattttacgatttttcaatttttctattccctttcgatttgaagcaa 13341493  T
Q  403 agtcccgattttgacaa 419  Q
    | |||||||||||||||    
T  13341492 aatcccgattttgacaa 13341476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 23172267 - 23172223
Alignment:
Q  375 tttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||    
T  23172267 tttgctattccctttcaacctgaagtaaagttccgattttgacaa 23172223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 41427081 - 41427173
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatccca 166  Q
    ||||| |||||||||||| |||||| | ||| |||||||||| |||||  |||||    | ||||||||||| |||||||||| |||||||||    
T  41427081 accatggttgtcaaaatcgcgacttcagtcccaaaatccaggtttttgcaactttgcgtagcttcaacgactcaaatccatagcagaatccca 41427173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 30799635 - 30799682
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 354  Q
    ||||||||||||||||||||  ||| ||||||||||||||||| ||||    
T  30799635 tatatcgattctacaaaagtagttgtgtaaaatccttcgatttcgatt 30799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 13350188 - 13350122
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgac 144  Q
    |||||||||||||| | |||||||||| |||||||| |||||||  |||||  ||||||||| ||||    
T  13350188 ttgttgtcaaaatcacaacttaaatcccaaaatccaagattttgcaactttactcaccttcatcgac 13350122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 218; Significance: 1e-119; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 77 - 419
Target Start/End: Original strand, 9770112 - 9770462
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  177 aatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||| ||| ||||||||||||||        |||||||||| || || | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaactaagttacttatgactatataccattcataacatatatttagtattaatttttttggg 9770311  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||  ||    
T  9770312 taaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagt 9770411  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     | ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  9770412 cccgattttgctattccctttcgacctaaagtaaagtcccgattttgacaa 9770462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 77 - 418
Target Start/End: Complemental strand, 9911541 - 9911191
Alignment:
Q  77 attgttgtcaaaatcccgacttaaa-tcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| ||||||||| ||||| ||||||||| || |||||||  ||||||||||||||||||| | ||||||||||||||||||| ||||| | ||    
T  9911541 attgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggca 9911442  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||||||||||        |||||||| || ||||||||||||||||||||||| |||||||||||| |||||||   ||||| |    
T  9911441 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatattaagtattattattttttg 9911342  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||  |    
T  9911341 gtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgag 9911242  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgaca 418  Q
    | | |||||| ||||||||||||||  || ||||||||||  |||||||||    
T  9911241 tcccgattttactattccctttcgatatgaagtaaagtcctaattttgaca 9911191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 23065093 - 23064740
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| |||||||| ||||||| | |||||||       
T  23065093 cattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtc 23064994  T
Q  176 aaatccatcgattttgattgc--------gatttcttataaattag--gtcatttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    ||||||||||||||| |||||        ||||||||||||| ||   ||||||||||||  |||| |||| ||||||||||||||||||||   |||||    
T  23064993 aaatccatcgattttaattgcaattttacgatttcttataaactataagtcatttatgaccctatatcatttataacatatatttagtattattattttt 23064894  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 365  Q
     |||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||     
T  23064893 tggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgattttacg 23064794  T
Q  366 tgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     |||| ||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  23064793 agttccgatttcgttattccctttcgacctgaagtaaagtcccgattttgacaa 23064740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 79 - 419
Target Start/End: Original strand, 5375666 - 5376015
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    ||||||||||||||| || ||||| |||||||  | ||||||| ||||||||||||||||||||||| |||| |||| ||||||   |||||||||||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  179 tccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttt-ttgggt 269  Q
    | |||||| ||||||||||||||        |||||||| || |||||||||||| ||||| |||| ||||||||||||||||||||| |||| ||||||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatcatttataacatatatttagtattaattttttttgggt 5375865  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgtt 369  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||  ||     
T  5375866 aaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacgagtc 5375965  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | |||||| |||||   ||| |||||| ||||||||||| ||||||||||    
T  5375966 ccgattttactatttatttttgacctgaagtaaagtcccaattttgacaa 5376015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 36120823 - 36121173
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| |||| ||||||  ||||||  ||||||||| || |||||||||||||||||||||||||||||| || ||| | ||||||  ||    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    |||| |||||||||||||||||||||        |||||| | || ||||||||||||||||||||||| |||| |||||||||||||||   |||||||    
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatataccatttataaaatatatttagtattattatttttgg 36121022  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
     |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||| |||  |    
T  36121023 -taaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgag 36121121  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | | ||||  ||||||||||||| || || ||||||| ||||||||||||||    
T  36121122 tcccgattaagctattccctttcaacttgaagtaaagacccgattttgacaa 36121173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 76 - 396
Target Start/End: Complemental strand, 5362093 - 5361767
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||| ||||||||||||||||        |||||||||||||| || ||||||||||| |||||||||||  ||||||||||||||||||   || ||| |    
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttttaacatatatttagtatt--tttcttttg 5361896  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-at 366  Q
    || ||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||  |||||||||| |||||||||||| |||| ||| ||| ||    
T  5361895 gtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgat 5361796  T
Q  367 gttctgattttgctattccctttcgacctg 396  Q
      ||| |||||||| ||| |||||||||||    
T  5361795 tgtct-attttgctcttctctttcgacctg 5361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 76 - 360
Target Start/End: Original strand, 10142898 - 10143191
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| ||||||||||||||||| |||||||  |  |||||| |||||||| ||||||||| |||| || ||||||||| ||| ||||||||||||    
T  10142898 cattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagaca 10142997  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||||        ||||||||||||||| | ||||||||||||||||||||| | |||| |||||||||||||||  ||||||      
T  10142998 aaatccatcgattttgattgtgattttacgatttcttataaatcaagtcatttatgactatataccaattataatatatatttagtattatttttttttt 10143097  T
Q  268 g-taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    | ||||||||||| |||| ||||||||||||||||| || |||||||||||||||||| |  |||| |||||||||||||||||||||||||||    
T  10143098 gataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgattttgattgcgatt 10143191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 72 - 419
Target Start/End: Original strand, 8889223 - 8889566
Alignment:
Q  72 caaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 171  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| |||| |||||||||||||||    
T  8889223 caaccattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaata 8889322  T
Q  172 gacaaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttt 263  Q
    | |||||| |||||||||||||||        ||||||||||||||  | ||| ||||||||||||||||||| |||| ||||||||||||||   ||||    
T  8889323 ggcaaaattcatcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatataccatttataatatatatttagtatt--ttttt 8889420  T
Q  264 ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgta 363  Q
     | |||||||| ||||||||| |||||||||||||||||||         |||||||||||||  |||||||| |||||||||||||| |||||||| ||    
T  8889421 gttggtaaaattcatcgattttgattgcgattttacaattt---------attctacaaaagtagttgagtaagatccttcgattttggttgcgatttta 8889511  T
Q  364 catgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||  |    ||||||||  || ||||||||||| || ||| |||||||||||||||    
T  8889512 caattgtcaattttgct-ctctctttcgacctgaagcaaaatcccgattttgacaa 8889566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 78 - 356
Target Start/End: Original strand, 17466080 - 17466366
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||||||||| || ||||||||| ||||||  ||||||||| || |||||||| ||| || |||| ||||||||| |||||||| ||||||  ||||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  178 atccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    |||||||||||| |||||||||||        || ||||| || ||||||||||||||||||||||| |||||||||||||| |||||  |||||   ||    
T  17466180 atccatcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatataccatttataacatatatttaatattatttttttgttgt 17466279  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||  ||||||| |||| ||| |||||| ||||    
T  17466280 aaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatctttcaattttgtttgc 17466366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 76 - 414
Target Start/End: Original strand, 13023566 - 13023903
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaa-tccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatccc--aaaatag 172  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||||| |||||||||||||||||| |||| |||||||||||||||||||  |||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  173 acaaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt 264  Q
    | |||||| ||||||||||||||        |||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatataccatttataacatatatttagtattaatttttt 13023765  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    |            |||   | | || |||||||| ||||||||||||||||| ||||||| | |||| |||||||| ||| || ||||||| |||| |||    
T  13023766 t----------tttcg--gtaggttacgattttaaaatttcctatatcgattttacaaaattccttgggtaaaatcattctatcttgattgtgattttac 13023853  T
Q  365 atgttctgattttgctattccctttcgacctggagtaaagtcccgatttt 414  Q
      |||| ||||||||||||| |||||||| || ||||||||||| |||||    
T  13023854 gagttccgattttgctattctctttcgacttgaagtaaagtcccaatttt 13023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 8011345 - 8011221
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||   |||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  177 aatccatcgattttgattgcgattt 201  Q
    ||| |||||||||||||||||||||    
T  8011245 aattcatcgattttgattgcgattt 8011221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 214 - 419
Target Start/End: Complemental strand, 6346940 - 6346734
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||  ||||||| ||| ||||||||||||||  ||||  ||| ||| ||| |||||||||||||| |||||||||||||||||||| |||||     
T  6346940 gtcatttatgcatatatacaatttataacatatatttatcattatttttgttttggtgaaatccatcgattttgattgcgattttacaatttcttatatt 6346841  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggagtaaagtcccgat 411  Q
     |||||||||||||  ||||||||||||||||||||||||||| |||| ||| || ||| ||||||||| ||||||||||||||| || ||| | |||||    
T  6346840 cattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttc-gattttgctcttccctttcgacctgaagcaaatttccgat 6346742  T
Q  412 tttgacaa 419  Q
    ||||||||    
T  6346741 tttgacaa 6346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 8011120 - 8010946
Alignment:
Q  215 tcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcg 313  Q
    |||||||| | ||||||| ||| ||||||||||||||| ||||  ||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||||    
T  8011120 tcatttataattatatacaatttataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaatttcttatatcg 8011021  T
Q  314 attctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctt 388  Q
    |||||| |||| |  |||||||||||||||||||||||||||||||| |||  || | |||||||||||||||||    
T  8011020 attctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctt 8010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 13551752 - 13551627
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||||||||| ||||||||| ||||||  |||||||||||    
T  13551752 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 13551653  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    ||||||||||||||| ||||||||||    
T  13551652 aaatccatcgattttaattgcgattt 13551627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 76 - 360
Target Start/End: Original strand, 37240261 - 37240530
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| |||||||| ||||||||||||||||  ||    ||  |||||| |||||||||||||||| ||||||||||||||| |||||||||| ||    
T  37240261 cattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaa-cccaaaataggca 37240355  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
     ||| |||||||||||||||        ||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||  ||| |        
T  37240356 taattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactctataccatttatatcatatatttagtatt--attat---- 37240449  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttc-ctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
                 |||| ||||| |||||||| |||||  ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  37240450 -------------attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgatt 37240530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 7044723 - 7044831
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||| |||||||||| ||||||||||||||     
T  7044723 aaccgttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaataa 7044822  T
Q  173 acaaaatcc 181  Q
     ||||||||    
T  7044823 gcaaaatcc 7044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 217 - 419
Target Start/End: Original strand, 24719722 - 24719918
Alignment:
Q  217 atttatgactatataccattcataacatatatttagtattaaatttt-ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgat 315  Q
    |||||||||||||||| ||| ||||||||||||||  ||||  |||  || |||||||  ||||||||| |||||||||||||| ||||| |||||||||    
T  24719722 atttatgactatatacaatttataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgat 24719821  T
Q  316 tctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttg 415  Q
    |||||||||||  | |||||||||||||||||| ||||| |||||       ||  ||||||||| ||||||||||||||| || ||| || ||||||||    
T  24719822 tctacaaaagtaatcgagtaaaatccttcgattgtgatttcgatt-------tttcgattttgctcttccctttcgacctgaagcaaaatctcgattttg 24719914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 307 - 416
Target Start/End: Original strand, 55476226 - 55476335
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtc 406  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  || | ||||||  || ||||||||||| || |||||||||    
T  55476226 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtaccgattttattactccctttcgacttgaagtaaagtc 55476325  T
Q  407 ccgattttga 416  Q
    ||||||||||    
T  55476326 ccgattttga 55476335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 214 - 419
Target Start/End: Original strand, 7045086 - 7045294
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||| ||||||||| | | ||||||||||||||  ||||  ||| ||| ||||| |||||| ||||| |||||  ||||||| ||||| ||||||    
T  7045086 gtcatttatcactatatacaaattataacatatatttaacattatttttgttttggtaagatccatagattttgattgatattttacgatttcttatatc 7045185  T
Q  313 --gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccga 410  Q
      ||||||  |||||   |||||||||||||||||||||||||||||||| ||    || |||||||||| ||||||||||||||| |||||| | || |    
T  7045186 tcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctcttccctttcgacctgaagtaaaattccta 7045285  T
Q  411 ttttgacaa 419  Q
    |||||||||    
T  7045286 ttttgacaa 7045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 18459838 - 18459733
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||| |||| | ||||| |||||||||| |||||||||| ||||||| ||||||| ||    
T  18459838 cattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggca 18459739  T
Q  176 aaatcc 181  Q
    ||||||    
T  18459738 aaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  81 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 180  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||| |||| ||| | ||||| ||| |||||||||||||||||||||| |||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  181 c 181  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 214 - 355
Target Start/End: Complemental strand, 9149708 - 9149565
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgatttt-acaatttcctatat 311  Q
    ||||||||| ||||||||| ||| ||||||||||||||| ||||  ||| ||| ||||||||| ||| |||| ||||||| |||| || ||||| |||||    
T  9149708 gtcatttataactatatacaatttataacatatatttagcattatttttcttttggtaaaatctatcaattttgattgcgttttttacgatttcttatat 9149609  T
Q  312 cgattctacaaaagttcttgagtaaaatccttcgattttgattg 355  Q
    ||||||||| |||||  |||||||||||||||| ||||||||||    
T  9149608 cgattctacgaaagtagttgagtaaaatccttcaattttgattg 9149565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 10394768 - 10394901
Alignment:
Q  227 atataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaag 325  Q
    |||||| ||| ||||||||||||||  ||||  ||| ||| ||||| |||||||||||| |||||  ||||||| |||||||||| ||||||||||||||    
T  10394768 atatacaatttataacatatatttaccattatttttgttttggtaatatccatcgattt-gattgtaattttacgatttcctataccgattctacaaaag 10394866  T
Q  326 ttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |  ||||||||| ||||||||||||||||||||||    
T  10394867 tagttgagtaaagtccttcgattttgattgcgatt 10394901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 13551589 - 13551463
Alignment:
Q  281 atttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgct 380  Q
    |||| ||||| ||||||| ||||| ||| |||||||||| |||||| || |||||||||||||||||||| ||||||||| |||  ||  ||||||||||    
T  13551589 attttgattgtgattttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgct 13551490  T
Q  381 attccctttcgacctggagtaaagtcc 407  Q
    ||||| |||||||| | ||||||||||    
T  13551489 attccttttcgaccagaagtaaagtcc 13551463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 4156763 - 4156866
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||||||||||||| ||||||  |||||||| ||||||| |||||||| ||||||| |||||  ||||||||||| ||||||  |||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaa 4156862  T
Q  177 aatc 180  Q
    ||||    
T  4156863 aatc 4156866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 7044907 - 7045054
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||| ||||||||| | | |||||| || ||||  ||||  ||| ||| |||||||||||||||||| |||||  ||||||| ||||| ||||||    
T  7044907 gtcatttatcactatatacaaattataacacatgtttaacattatttttgttttggtaaaatccatcgattttgattgatattttacgatttcttatatc 7045006  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||| | |||||||  |||||||||||| |||||||||||||||||||    
T  7045007 gattattcaaaagtagttgagtaaaatcattcgattttgattgcgatt 7045054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 24719516 - 24719610
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaat 170  Q
    |||||||||||||||| |||||||| | ||||||| || ||||||| |||||| |||||||||||||||| |||||||||| ||||||| |||||    
T  24719516 cattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 6347194 - 6347088
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||| |||||||||| || |||||||||||||||||||||||||||  ||||| || ||||||||||||| ||||||||||  || || ||||||||  |    
T  6347194 cattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatagccgagtctcaaaataggta 6347095  T
Q  176 aaatcca 182  Q
    |||||||    
T  6347094 aaatcca 6347088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 7452419 - 7452523
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||  ||||| ||||||||||||||| | |||||||||| || ||| || |||| ||    
T  7452419 cattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgac-tcaatccatagtggattcctaatataggca 7452517  T
Q  176 aaatcc 181  Q
    ||||||    
T  7452518 aaatcc 7452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 5943166 - 5943062
Alignment:
Q  291 cgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttc 390  Q
    ||||||||| ||||| || | |||||||||||||||  |||||||||||||||| |||||  |||||||| |||   || |||||||||| |||||||||    
T  5943166 cgattttacgatttcttaaaccgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctcttccctttc 5943067  T
Q  391 gacct 395  Q
    |||||    
T  5943066 gacct 5943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 7452707 - 7452796
Alignment:
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||||||||   ||| | |||||| ||||| ||||| ||||||||||||||  |||||| |||||||||||||||||||||||||    
T  7452707 aaaatccatcgattttagttgtgcttttacgatttcgtatattgattctacaaaagtagttgagt-aaatccttcgattttgattgcgatt 7452796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 311 - 416
Target Start/End: Original strand, 4157269 - 4157377
Alignment:
Q  311 tcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atg--ttctgattttgctattccctttcgacctggagtaaagtcc 407  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||||||| ||| |||  ||  ||||||||| |||||||||||| |  || ||| |||    
T  4157269 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcc 4157368  T
Q  408 cgattttga 416  Q
    |||||||||    
T  4157369 cgattttga 4157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 311 - 416
Target Start/End: Original strand, 4157556 - 4157664
Alignment:
Q  311 tcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atg--ttctgattttgctattccctttcgacctggagtaaagtcc 407  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||||||| ||| |||  ||  ||||||||| |||||||||||| |  || ||| |||    
T  4157556 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcc 4157655  T
Q  408 cgattttga 416  Q
    |||||||||    
T  4157656 cgattttga 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 8367437 - 8367489
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  8367437 tcctatatcgatattaccaaagtccttgagtaaaatccttcgattttgattgc 8367489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 9149864 - 9149813
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgacttt 128  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgacttt 9149813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 8931441 - 8931510
Alignment:
Q  288 ttgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcg 357  Q
    ||||||||||| |||||| ||||| |||| ||  |||||  ||||||||||||||||||||||| |||||    
T  8931441 ttgcgattttataatttcttatattgattttatcaaagtagttgagtaaaatccttcgattttggttgcg 8931510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 4156998 - 4157101
Alignment:
Q  215 tcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcg 313  Q
    |||||||| ||||||||| ||| |||||||||||| |  ||||  ||| |||  ||||||||||||||||| |||||||||||||| ||||| | ||| |    
T  4156998 tcatttatcactatatacaatt-ataacatatattcaacattatttttgttttagtaaaatccatcgattttgattgcgattttacgatttcttgtattg 4157096  T
Q  314 attct 318  Q
    |||||    
T  4157097 attct 4157101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 5846509 - 5846458
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactt 127  Q
    ||||||||| |||||| |||||||||||  |||||||||||||||| |||||    
T  5846509 cattgttgttaaaatcacgacttaaatctcaaaatccaggattttgcgactt 5846458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 7803049 - 7803110
Alignment:
Q  119 ttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 181  Q
    |||||||||| |||| || || ||||| ||| |||||| ||||||||||||||||||||||||    
T  7803049 ttgtgactttattcagct-cagcgactcaaacccatagcagaatcccaaaatagacaaaatcc 7803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 7825002 - 7825064
Alignment:
Q  119 ttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 181  Q
    |||||||||| |||| ||||  ||||| ||| |||||| ||||||||||||||| ||||||||    
T  7825002 ttgtgactttattcagcttccgcgactcaaacccatagcagaatcccaaaataggcaaaatcc 7825064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 8743658 - 8743604
Alignment:
Q  305 cctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    |||||||||||| |||||| ||  |||||||||||| ||||||||||||| ||||    
T  8743658 cctatatcgattatacaaatgtagttgagtaaaatctttcgattttgattacgat 8743604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 18459601 - 18459563
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttag 252  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  18459601 gtcatttatgactatatacagttcataacatatatttag 18459563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 55476120 - 55476205
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||||||||||||||| | ||| ||||||||||||| | ||||  ||| ||| |||| ||||| ||||||| ||||||||||||||    
T  55476120 gtcatttatgactatatgcaatttataacatatattttgcattatttttgttttggtagaatcc-tcgattttgattgcgattttac 55476205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 5884174 - 5884129
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattt 349  Q
    |||||||| |||||||||||| |  |||||||||||||||||||||    
T  5884174 tcctatattgattctacaaaaatagttgagtaaaatccttcgattt 5884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 8744132 - 8744087
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttg 121  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||||||    
T  8744132 cattgttgtcgaaattccgacttaaatccaaaaattcaggattttg 8744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 215; Significance: 1e-117; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 70 - 416
Target Start/End: Original strand, 8436 - 8788
Alignment:
Q  70 tacaaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  8436 tacaatcattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaa 8535  T
Q  170 tagacaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatt 261  Q
    ||  |||||||||| |||||||||||||||||        |||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||  ||    
T  8536 taagcaaaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataccatatatttagtatta--tt 8633  T
Q  262 ttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||     
T  8634 tttttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattt 8733  T
Q  362 tacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttga 416  Q
    |||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  8734 tacgagttccgattttgttattccctttcgacctgaagtaaagtcccgattttga 8788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 215; Significance: 1e-117; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 21846398 - 21846053
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||| |    
T  21846398 cattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaa 21846299  T
Q  176 aaatccatcgattttgattgcgatttc--ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaa 273  Q
    ||||||||||||||||||||||||||   || | |   | ||||||||| ||||||||  ||| ||||||||||||||||||||| ||||||||||||||    
T  21846298 aaatccatcgattttgattgcgattttatttttcataaacgtcatttataactatatataatttataacatatatttagtattaatttttttgggtaaaa 21846199  T
Q  274 tccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctga 373  Q
    | |||| |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||   || | ||    
T  21846198 ttcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccga 21846099  T
Q  374 ttttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  21846098 ttttgctattccctttcgacctggagtaaagtcctgattttgacaa 21846053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 74 - 419
Target Start/End: Complemental strand, 9352195 - 9351842
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||| |||| ||| ||||||||||||    
T  9352195 accattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaataga 9352096  T
Q  174 caaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    |||||||| |||||||||||||||||||        |||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  9352095 caaaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatataccatttataacatatatttagtattaattttttt 9351996  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 365  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||  ||||||||| ||||||||||||||||| |||     
T  9351995 gggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttacg 9351896  T
Q  366 tgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     || | ||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  9351895 agtcccgattttgctattcgctttcgacctgaagtaaagtcttgattttgacaa 9351842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 18304941 - 18304597
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaa-cgacttaaatccatagtagaatcccaaaatagac 174  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  175 aaaatccatcgattttgattgcgattt-------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    |||||||||| ||||||||||||||||       |||||||  || ||||||||||||||||||||||||||||| ||||||||||||||| |||||| |    
T  18304841 aaaatccatcaattttgattgcgatttacgatttcttataagctaagtcatttatgactatataccattcataacgtatatttagtattaattttttttg 18304742  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||| |||       
T  18304741 ataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttac--- 18304645  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
        ||||||||| || |||||||||||| ||| ||||||||||||||||||    
T  18304644 ----gattttgctttttcctttcgacctgaagtgaagtcccgattttgacaa 18304597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 76 - 415
Target Start/End: Complemental strand, 9955165 - 9954816
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||  ||    
T  9955165 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagca 9955066  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtatta--aatttttt 265  Q
    ||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||| |||||||||||| |||||||  | ||||||    
T  9955065 aaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatataccatttataacatatattcagtattattattttttt 9954966  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 365  Q
    | ||||||||||||||| | |||||||||||||||||||||||||| ||||||  |||||| |||  |||||||||||||||||||||||||||| |||     
T  9954965 gtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttacg 9954866  T
Q  366 tgttctgattttgctattccctttcgacctggagtaaagtcccgattttg 415  Q
     || | ||||||||||||||||||||||||  |||||||| |||||||||    
T  9954865 agtcccgattttgctattccctttcgaccttaagtaaagttccgattttg 9954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 73 - 419
Target Start/End: Original strand, 13100187 - 13100540
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    ||||||| ||||||||||||| |||||||| |||||||| ||||||||  |||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  13100187 aaccattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaatag 13100286  T
Q  173 acaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt 264  Q
     ||||| ||||||||||||||||||||||        ||||||||  | |||||||||||||||||||||||  |||||||||||||||||| | |||||    
T  13100287 gcaaaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatataccatttgtaacatatatttagtattta-ttttt 13100385  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||||| || |||||||||||||||| |||||||||||||||| |||    
T  13100386 tgggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttac 13100485  T
Q  365 atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
      |||| |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  13100486 gagttccgattttgccattccctttcgacttgaagtaaagtcccgattttgacaa 13100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 25146898 - 25146547
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  176 aaatccatcgattttgattgcgattt-------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    || | |||| ||||| ||||||||||       |||||||| || || |||||||||||||||| ||| ||||| |||||||||||| || |||||||||    
T  25146798 aagtacatcaattttaattgcgatttacgatttcttataaactaagttatttatgactatatacaatttataacgtatatttagtatcaatttttttggg 25146699  T
Q  269 taaaatccatcgatttcgattgcgatttt-acaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    |||||||||||||||| |||||||||||| | ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||       
T  25146698 taaaatccatcgattttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacgat 25146599  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||| ||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  25146598 ttccgattttgctattccctttcaacctgaagtaaagtcctgattttgacaa 25146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 77 - 419
Target Start/End: Original strand, 23528656 - 23529006
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  177 aatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||| ||||||||||| ||||||        ||||||||||  | ||||||||||||||||||||||| ||||| |||||||| |||||   || |||||    
T  23528756 aatctatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatataccatttataacgtatatttattattattattattggg 23528855  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  ||    
T  23528856 taaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagt 23528955  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     | ||| || || |||| |||  ||||| | |||||| |||||||||||||    
T  23528956 cccgatcttactgttcctttttaacctgaaataaagttccgattttgacaa 23529006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 79 - 406
Target Start/End: Complemental strand, 19010073 - 19009740
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| ||| | ||||||  |||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  179 tccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggta 270  Q
    |||||||||||||||||||||||        ||||||||||| ||||||||| ||||||||||||| |||||||||  ||| ||||   ||||| |||||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaattaagtcatttataactatataccatttataacatat--ttaatattttttttttggggta 19009876  T
Q  271 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttc 370  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||  || |    
T  19009875 aaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacgagtcc 19009776  T
Q  371 tgattttgctattccctttcgacctggagtaaagtc 406  Q
     ||||||||||||||||||||| ||| |||||||||    
T  19009775 cgattttgctattccctttcgatctgaagtaaagtc 19009740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 84 - 419
Target Start/End: Complemental strand, 16125580 - 16125234
Alignment:
Q  84 tcaaaatcccgacttaaatcctaaaatccaggattttgtgactttctt---caccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 180  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||||   ||||||||||||| ||||||||||||| ||||  ||||||| |||||||    
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaataggcaaaatc 16125481  T
Q  181 catcgattttgattgcgatttc--------ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaa 272  Q
    ||| |||||||||||||||||         ||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||   |||||||||||     
T  16125480 cattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatataccatttataacatatatttagtattattatttttgggtaac 16125381  T
Q  273 atccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctg 372  Q
     ||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||  || |      
T  16125380 gtccatcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacgagtccca 16125281  T
Q  373 attttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||||| |||||||||||||||||| |||||||| |||||||| ||||    
T  16125280 attttactattccctttcgacctgaagtaaagttccgattttaacaa 16125234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 77 - 421
Target Start/End: Complemental strand, 13276395 - 13276036
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||| |||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  177 aatccatcgattttgattgcg--------atttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||| ||||||||||||||||        ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||   ||||| ||    
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatcatttataacatatatttagtattattattttttgg 13276196  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattt------------tgattgc 356  Q
    || | ||||||||||| |||||| ||||||||||||| |||||||||||||||||| | ||| |||  |||||||||||||            |||||||    
T  13276195 tatagtccatcgattttgattgcaattttacaatttcttatatcgattctacaaaattccttaagt--aatccttcgattttgattttgattctgattgc 13276098  T
Q  357 gattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
    |||| |||  || ||||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  13276097 gattttacgagtcctgattttgctattctctttcgacc---agtaaagtcccgattttgacaatc 13276036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 78 - 419
Target Start/End: Complemental strand, 42180193 - 42179850
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    |||||||||||||||| |||||||| ||||||| |||||||||| |||||||||| |||||||||| | ||||||||||||||||  |||||||| ||||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  178 atccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtatta-aattttttggg 268  Q
    || |||||||||||||||        |||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| | |||||| ||    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatataccatttataacatatatatagtattatattttttttgg 42179994  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    |||||||||||||||| ||||| | |||||||||||||||       ||||||||||| || || ||||||||||||||||||||||||||| |||  ||    
T  42179993 taaaatccatcgattttgattgtggttttacaatttccta-------tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacgagt 42179901  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |  |||| |||||||||||||  ||| | |||||| | | |||||||||||    
T  42179900 ttcgattatgctattcccttttaacccgaagtaaatttctgattttgacaa 42179850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 78 - 421
Target Start/End: Complemental strand, 17869873 - 17869527
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||||||||||| |||||||||| ||||     |||||||| |||||||||||||||| ||||| |||||||| |||||||||| ||||||| ||||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  178 atccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    || | ||||||||||||||        |||||||| |||| || ||| ||||| || |||||| ||| | ||||||||||||||||||   ||||| |||    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaactaagtcttttataaccatatactatttacaacatatatttagtattattattttttggt 17869679  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgtt 369  Q
    ||||| ||||||||| |||||||||||||||||||  || || ||||||| |||||| |||||||||||||||| |||||||||||||||| ||| |||     
T  17869678 aaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacgtgtc 17869579  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
    | ||||||||| |||||||| |||||| | || |||||||||||||||||||    
T  17869578 ccgattttgctcttcccttttgacctgaattagagtcccgattttgacaatc 17869527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 79 - 419
Target Start/End: Original strand, 12513283 - 12513621
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||| |||||||||||| ||||  ||||||  |||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  179 tccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggta 270  Q
    |||||||||||||||||        |||||||||||||| || |||||||| |||||||||||||  |||||  ||||||| ||||| ||||||| ||||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatataccatatataac--atatttaatattatatttttt-ggta 12513479  T
Q  271 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttc 370  Q
    ||||| |||||||| |||||||||||||||||||| ||       |||||| ||||  ||||||||||||||| ||||||| |||||||| ||||  |      
T  12513480 aaatctatcgattttgattgcgattttacaatttctta-------tctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgt 12513572  T
Q  371 tgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     ||||||||| ||| |||| |||||| || ||| |||| ||||||||||    
T  12513573 cgattttgctcttctcttttgacctgaagcaaaatcccaattttgacaa 12513621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 76 - 303
Target Start/End: Complemental strand, 9327345 - 9327109
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| ||||||| |||||||||||||||||  ||| ||||| |||||||| |||||||||||||| ||||| |||||| ||||||||||||||||    
T  9327345 cattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagaca 9327246  T
Q  176 aaatccatcgattttgattgcg--------atttcttataaattaggtca--tttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    ||||||||||||||||||||||        |||||||||||| || ||||  ||| ||||||||||||||| |||| |||||||||||||| | ||||||    
T  9327245 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatataccatttataatatatatttagtatt-attttttt 9327147  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatt 303  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  9327146 gggtaaaattcatcgattttgattgcgattttacaatt 9327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 72 - 389
Target Start/End: Complemental strand, 9128974 - 9128647
Alignment:
Q  72 caaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 171  Q
    |||| |||||||| |||||| |||||||||||||||||   ||||| ||| |||||||||||| || ||||||| ||||  |||||||||||  ||||||    
T  9128974 caactattgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaata 9128875  T
Q  172 gacaaaatccatcgattttgattgcg--------atttcttataaattaggtcatttatgactatataccattcataacatatatttagtatta--aatt 261  Q
    |||||||| |||||||||||||||||        |||||||||||| || || |||| ||||||||||||||| ||||||||| ||||||||||  | |     
T  9128874 gacaaaattcatcgattttgattgcgatttgacgatttcttataaactaagttatttttgactatataccatttataacatatctttagtattattatta 9128775  T
Q  262 ttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    |  |  ||||||| |||  |||| ||||||||||||||||||| |||||||||| |||||||| | ||| |||||||||||||||||||||| | ||||     
T  9128774 tcatttgtaaaattcataaattttgattgcgattttacaattttctatatcgatcctacaaaaatcctttagtaaaatccttcgattttgatcgtgattt 9128675  T
Q  362 tacatgttctgattttgctattcccttt 389  Q
    |||  || | ||||||||||||||||||    
T  9128674 tacgagtcccgattttgctattcccttt 9128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 286 - 419
Target Start/End: Complemental strand, 14074395 - 14074262
Alignment:
Q  286 gattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattcc 385  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||   ||||  |||||||||||||    
T  14074395 gattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctattcc 14074296  T
Q  386 ctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||||||||||| |||||||||| |||||||||||    
T  14074295 ctttcgacctgaagtaaagtcctgattttgacaa 14074262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 360
Target Start/End: Original strand, 47785986 - 47786149
Alignment:
Q  196 cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttg-ggtaaaatccatcgatttcgattgcgat 294  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||  ||| ||||    
T  47785986 cgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtatt--attttttgtggtaaaatccatcgatttttatttcgat 47786083  T
Q  295 tttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||   ||||| |||||| |||||||||||||  ||||||||||||||||||||||| ||| ||||    
T  47786084 tttgtgatttcttatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgatt 47786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 32881416 - 32881600
Alignment:
Q  166 aaaatagacaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtatta 257  Q
    ||||||| |||||| |||||||||||||||||||||        ||||||||||| |||||| |||||||||||||||| |||||||||||||||||||     
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatataccatttataacatatatttagtatt- 32881514  T
Q  258 aattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattt 349  Q
        |||||  ||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||||    
T  32881515 ----ttttg--taaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgattt 32881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 41032800 - 41032675
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||| ||||||||||| || ||| |||||||||| || |||||||||||||||||||| |||||||||||||||| | ||||||| ||    
T  41032800 cattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggca 41032701  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    ||||||||||||||| ||||||||||    
T  41032700 aaatccatcgattttaattgcgattt 41032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 267 - 419
Target Start/End: Complemental strand, 17055850 - 17055699
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacat 366  Q
    ||||||||||||| |||| |||||| ||||||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||      
T  17055850 ggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacga 17055751  T
Q  367 gttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    || | |||||| | || ||||||||||||  ||||||| ||||||||||||||    
T  17055750 gtcccgattttacaatcccctttcgacct-aagtaaagacccgattttgacaa 17055699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 233 - 421
Target Start/End: Original strand, 16434673 - 16434861
Alignment:
Q  233 cattcataacatatatttagtattaaatttt--ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttctt 330  Q
    |||| ||||||||||||||  ||||| ||||  || |||| ||||||||||||| ||||||||||||   || |  |||||| |||||||||||||| |     
T  16434673 catttataacatatatttatcattaatttttgttttggtagaatccatcgattttgattgcgattttgttatct--tatatcaattctacaaaagttgtc 16434770  T
Q  331 gagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
    |||||||||||||||||||||||||| ||| ||| || ||| |||||||||||||||||| ||||| ||| ||| ||| |||||||||||||    
T  16434771 gagtaaaatccttcgattttgattgcaattttacgattttc-gattttgctattcccttttgacctagagaaaaatcctgattttgacaatc 16434861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 17056129 - 17056004
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||| |||||||||| || |||||||||||||||||||||||||  | ||||| |||||||||||||| | ||||||||||||||   ||||||   |    
T  17056129 cattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagta 17056030  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    ||||||||||||||||||||||||||    
T  17056029 aaatccatcgattttgattgcgattt 17056004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 18337651 - 18337547
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||||||| | |||||||||||||||||||  ||||| |||||||||||||||| |||||||||| |||| |||||||||| ||    
T  18337651 cattgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggca 18337553  T
Q  176 aaatcc 181  Q
    ||||||    
T  18337552 aaatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 17197423 - 17197311
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||  |||||||| |||  |||| |||||||||| ||||||||||| || ||||||    
T  17197423 tcctacattgattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagtaaa 17197324  T
Q  404 gtcccgattttga 416  Q
    |||||||||||||    
T  17197323 gtcccgattttga 17197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatcc 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 270 - 419
Target Start/End: Complemental strand, 41032701 - 41032552
Alignment:
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgt 368  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||||||| |  ||||||||||| ||||||||||  |||||||| ||| ||      
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgatta 41032602  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||  |||||||| ||| ||||| ||||| |||||| |||| ||||||||||    
T  41032601 tc-aattttgctcttctctttcaacctgaagtaaaatccctattttgacaa 41032552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    |||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||  |||||||||| ||||||| |||||||||  |||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 95 - 249
Target Start/End: Original strand, 18228230 - 18228380
Alignment:
Q  95 acttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgatt 194  Q
    ||||||||||||||||||| ||||||  || |||| ||||||||||||           ||||||||||||||||||| ||||||||||| |||||||||    
T  18228230 acttaaatcctaaaatccaagattttacgattttcatcaccttcaacg-----------tagtagaatcccaaaataggcaaaatccatcaattttgatt 18228318  T
Q  195 gc-------gatttcttataaattaggtcatttatgactatataccattcataacatatatt 249  Q
    |        |||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  18228319 ggattttatgatttcttataaattaagttatttatgactatataccatttataacatatatt 18228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 271 - 419
Target Start/End: Original strand, 30619145 - 30619290
Alignment:
Q  271 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgtt 369  Q
    |||||| ||||||| |||||||||||||||||||   |||||||||||||||||||  ||||||||||||||||||||||  |||||||| ||| ||  |    
T  30619145 aaatccttcgattt-gattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcgatt-tacgattgt 30619242  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | ||||||||| ||| ||||||||||| || ||| |||||||||||||||    
T  30619243 c-gattttgctcttctctttcgacctgaag-aaaatcccgattttgacaa 30619290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 12800710 - 12800623
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcc 164  Q
    |||||||| |||||||| ||||||||||||||||  ||||||||  |||||||||||| |||||||||| ||||| |||||| |||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcc 12800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 34478900 - 34478833
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacga 143  Q
    ||||||||| |||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 8772696 - 8772809
Alignment:
Q  69 ttacaaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatccc-aa 167  Q
    |||||| ||| ||| ||| ||||||||||||||||| ||||||||| |||||| |||||| |  | ||||||| ||| |||||||||| ||| |||| ||    
T  8772696 ttacaagcatggttatcagaatcccgacttaaatcccaaaatccagaattttgcgactttgtgtagcttcaacaactcaaatccatagcagagtcccaaa 8772795  T
Q  168 aatagacaaaatcc 181  Q
    || |||||||||||    
T  8772796 aaaagacaaaatcc 8772809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 367 - 419
Target Start/End: Complemental strand, 9954827 - 9954775
Alignment:
Q  367 gttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  9954827 gttccgattttgctattccctttcgaccttaagtaaagtcccgattttgacaa 9954775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 572
Target Start/End: Original strand, 39783865 - 39783959
Alignment:
Q  482 tatttatttagatggaaattgtcccgatcagattgcgaatagcagttaaccaattacctcttt-----gcctgcccacaaaacaaggaaggtggtg 572  Q
    ||||||||||||||||||||||| |||| |||||| |||||| | ||| ||||||||||||||     | ||| ||||||||||||||||||||||    
T  39783865 tatttatttagatggaaattgtctcgattagattgtgaatagaa-ttagccaattacctctttaatttgtctggccacaaaacaaggaaggtggtg 39783959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 419
Target Start/End: Complemental strand, 12002751 - 12002640
Alignment:
Q  306 ctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagt 405  Q
    |||||||||||||||||||||   ||||||||||||||||||||| |||| |||| |    || |  ||||||||| ||||||||||| |  | ||||||    
T  12002751 ctatatcgattctacaaaagtctatgagtaaaatccttcgatttttattgtgatttt--gagtcccaattttgctactccctttcgacttaaattaaagt 12002654  T
Q  406 cccgattttgacaa 419  Q
    ||||||||||||||    
T  12002653 cccgattttgacaa 12002640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 8773505 - 8773613
Alignment:
Q  306 ctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagt 405  Q
    ||||||| ||||||||||| | ||| ||||||||||||| ||||| ||||||||| |||  |   | ||| ||||||||||||||||| |  ||||||||    
T  8773505 ctatatcaattctacaaaaatccttaagtaaaatccttcaattttaattgcgattttacgag---tcattctgctattccctttcgactttaagtaaagt 8773601  T
Q  406 cccgattttgac 417  Q
    | ||||||||||    
T  8773602 ctcgattttgac 8773613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 27917578 - 27917477
Alignment:
Q  80 gttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 179  Q
    ||||||||||||||||||||||| || ||||| ||||||||| || ||| || ||||||||| ||  |||| ||||| |||||| ||| |||  ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaatcacaagataagcaaaat 27917479  T
Q  180 cc 181  Q
    ||    
T  27917478 cc 27917477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 18228457 - 18228533
Alignment:
Q  262 ttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaa 338  Q
    |||| ||||| || ||||||| | |||||||||||||| ||||| |||||||||||||||||||   ||||||||||    
T  18228457 tttttggtaacattcatcgatgttgattgcgattttacgatttcttatatcgattctacaaaagaagttgagtaaaa 18228533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 27502335 - 27502239
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    |||||| |||| ||||||| || ||||| | | |||||||||  |||||| ||||| || | ||||||||||| |||||||||| ||||||||||||    
T  27502335 aaccatggttgccaaaatcgcggcttaagttccaaaatccagatttttgtaactttgtttaacttcaacgactcaaatccatagcagaatcccaaaa 27502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 473 - 576
Target Start/End: Original strand, 15382159 - 15382262
Alignment:
Q  473 gagcactgttatttatttagatggaaattgtcccgatcagattgcgaatagcagttaaccaattacctctttgcctgcccacaaaacaaggaaggtggtg 572  Q
    |||||||| ||||||| |||||  ||||| |||||||   |  ||||||| || ||||||||| |||||| |||||| |||||||||||| ||| |||||    
T  15382159 gagcactgctatttatctagataaaaattatcccgatggtacagcgaataacacttaaccaatcacctctatgcctggccacaaaacaagtaagatggtg 15382258  T
Q  573 ctat 576  Q
    ||||    
T  15382259 ctat 15382262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 24117005 - 24117111
Alignment:
Q  75 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 174  Q
    |||||||||||||||| || | |||||| |||||||  | ||||||   ||||| |||||||||||||| | ||||  ||| ||||||||||||| | ||    
T  24117005 ccattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaatttatattagaatcccaaaacaaac 24117104  T
Q  175 aaaatcc 181  Q
    |||||||    
T  24117105 aaaatcc 24117111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 383
Target Start/End: Complemental strand, 9321599 - 9321550
Alignment:
Q  334 taaaatccttcgattttgattgcgattgtacatgttctgattttgctatt 383  Q
    ||||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  9321599 taaaatccttcgattttgattgcgattttacgagttccgattttgctatt 9321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 356
Target Start/End: Complemental strand, 27502230 - 27502197
Alignment:
Q  323 aagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||||||||||||||||||||||||||||    
T  27502230 aagttcttgagtaaaatccttcgattttgattgc 27502197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 47785791 - 47785836
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttg 121  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||    
T  47785791 cattgttgtcaaaatcccaacataaatcctaaaattcaggattttg 47785836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 12002856 - 12002771
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||  ||| ||| |||| ||||| | ||||| ||||||||||||||    
T  12002856 gtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaatcc-ttgattttgattgcgattttac 12002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 16417308 - 16417345
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatcca 113  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  16417308 cattgttgtcaaaatcgcgacttaaatcctaatatcca 16417345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 17056032 - 17055995
Alignment:
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttc 305  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  17056032 gtaaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 360
Target Start/End: Original strand, 22789421 - 22789474
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||| ||||||||||| | | |||||||||||| ||||||||||| ||||    
T  22789421 tatatcgagtctacaaaagtccattagtaaaatcctttgattttgattgtgatt 22789474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 28745769 - 28746126
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  28745769 cattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagaca 28745868  T
Q  176 aaatccatcgattttgattgcgatttc--------------ttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatt 261  Q
    |||| |||||||||||||||||||||               ||||||| || ||||||||||||||||||| ||| |||||||||||||| |||||| ||    
T  28745869 aaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatactatttataacatatatttactattaattt 28745968  T
Q  262 ttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  28745969 ttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattt 28746068  T
Q  362 tacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||  || | ||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  28746069 tacgagtcccgattttgctattttctttcgacctgaagtaaagtcccaattttgacaa 28746126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 75 - 419
Target Start/End: Original strand, 29067282 - 29067626
Alignment:
Q  75 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 174  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29067282 ccattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagac 29067381  T
Q  175 aaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaa--attttt 264  Q
    |||||||||||||||||||||        |||||||||||||| || |||||||||||||||||||         |||||||||||| ||||   |||||    
T  29067382 aaaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatatac---------catatatttagtgttaatttttttt 29067472  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||| | ||||||||||||||||||| |||||||| |||| ||     
T  29067473 tgggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcga-tttgattgagattttat 29067571  T
Q  365 atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
      |||| ||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  29067572 gagttccgattttgctattcccattcgacctgaagtaaagttccgattttgacaa 29067626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 80 - 419
Target Start/End: Original strand, 39427905 - 39428257
Alignment:
Q  80 gttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 179  Q
    |||||||||||||||| ||||||  |||||||| ||||||||  ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagt 39428004  T
Q  180 ccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttt-ttgggta 270  Q
    ||||||||||||||||||||||        |||||||| || ||||||||||||||||||| | | ||||||||||||||||||||| |||| |||||||    
T  39428005 ccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatactacttataacatatatttagtattaattttttttgggta 39428104  T
Q  271 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcg----attttgattgcgattgtacat 366  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||    ||||||||||||||| ||       
T  39428105 aaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgatttattttgattgcgattttatga 39428204  T
Q  367 gttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    || | ||||||||||||||||||| |||   ||||||||||||||||||||||    
T  39428205 gtcccgattttgctattccctttcaaccgcaagtaaagtcccgattttgacaa 39428257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 76 - 419
Target Start/End: Complemental strand, 24620333 - 24619976
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgac---tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    ||||||||||||||| |||||||||||||||||||  | ||||||| |||   |||||||||||||||||||| |||| || ||||||||| ||||||||    
T  24620333 cattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T
Q  173 acaaaatccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtatt---aaatt 261  Q
     |||||| |||||||||| |||||        ||||||||||||| || ||||||||||| ||||||||||| |||| ||||||||||||||   |  ||    
T  24620233 gcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatataccatttataaaatatatttagtatttttatttt 24620134  T
Q  262 ttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    |||| ||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  24620133 tttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgattt 24620034  T
Q  362 tacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||| || |  ||||||||||||||||| ||| || |||||||| |||||||||||||    
T  24620033 tacaagtcccaattttgctattcccttttgacttgaagtaaagttccgattttgacaa 24619976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 77 - 360
Target Start/End: Original strand, 20756039 - 20756313
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||||||||||||  |||||| |||||||||| || ||||||||||||||| |||| |||||||||||||||||  ||||||| |||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  177 aatccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    |||| |||||||||||||||        ||||||||||||| || |||||||||                 ||||||||||||||||||  | |||||||    
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaactaagtcatttat-----------------aacatatatttagtattatttcttttggg 20756221  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||    
T  20756222 taaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgatt 20756313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 75 - 360
Target Start/End: Complemental strand, 8156262 - 8155967
Alignment:
Q  75 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa-taga 173  Q
    ||||||||||||||||||| |||||||| ||||||| ||| |||||  || ||| ||||||||||| |||| |||||||||||| |||||||||| ||||    
T  8156262 ccattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattaga 8156163  T
Q  174 caaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtatta--aatttt 263  Q
    ||||||||||||||||||||||        |||||||||||||| || || |||||| ||||||||||||| ||||||||||||||||||||  | | ||    
T  8156162 caaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatataccatttataacatatatttagtattattattatt 8156063  T
Q  264 ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    || ||||||||||| |||| | ||||||||||||||| |||| |||||| || ||||||||||  ||||||||||||||||||| ||  ||||||||    
T  8156062 tttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgatcttagttgcgatt 8155967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 82 - 360
Target Start/End: Original strand, 17064326 - 17064598
Alignment:
Q  82 tgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 181  Q
    |||||||||||||||||||||| |||||| |||||||||| || | | ||||||||||||||||  ||| ||||||||||| | |||||||||||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  182 atcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaa 273  Q
    ||||||||| ||||||||||        |||||||| || ||||||||||||||||||              |||||||||||   |||||| |||||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaactaagtcatttatgactatata--------------tatttagtattttttttttttggtaaaa 17064511  T
Q  274 tccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17064512 tccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgatt 17064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 77 - 419
Target Start/End: Original strand, 22137278 - 22137627
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||| | ||||||| ||||||||||||||||| || ||| ||  ||||||||||||||| |||| || |||||||||||| ||||||||||||  |||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  177 aatccatcgattttgattgcgattt-------cttataaattaggtcatttatgactatataccattcataacatatatttagtatta--aattttttgg 267  Q
    |||||||||||||| ||||||||||       |||||  | || ||||||||||||||||||| ||| ||||| ||||||||||||||  |||||||| |    
T  22137378 aatccatcgattttaattgcgattttcgatttcttatttactaagtcatttatgactatatactatttataac-tatatttagtattattaatttttttg 22137476  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
     ||||||||||| |||| ||||  | |||||| ||||| ||||||||||||||||||||  ||||||||||| ||| ||||||| ||| |||| |||       
T  22137477 -taaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttactat 22137575  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | ||||||||||| ||| ||||||||||| |  ||| || ||||||||||||    
T  22137576 tgctgattttgctcttctctttcgacctgaaacaaaatctcgattttgacaa 22137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 95 - 301
Target Start/End: Complemental strand, 22494892 - 22494679
Alignment:
Q  95 acttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgatt 194  Q
    |||||||||||||||||   ||||||| |||||| |||||||||||||||| |||| ||||||||||||| |||||| ||||||| ||||||||||||||    
T  22494892 acttaaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgatt 22494793  T
Q  195 gcgatttctt-ataaattaggtcatttatgactatataccattcataacatatatttagtattaa------attttttgggtaaaatccatcgatttcga 287  Q
    |||||||    ||||| || |||| |||||||||||||||||| |||||||||||||||||| ||       |||||||||||||||||||| |||| ||    
T  22494792 gcgattttacgataaactaagtcagttatgactatataccatttataacatatatttagtatcaagttttttttttttgggtaaaatccatctattttga 22494693  T
Q  288 ttgcgattttacaa 301  Q
    ||||||||||||||    
T  22494692 ttgcgattttacaa 22494679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 78 - 360
Target Start/End: Complemental strand, 3449419 - 3449148
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| || ||||| |||||||||||| ||||||| ||||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  178 atccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    |||||| |||||| ||||        |||||||||||||| || ||||||| ||                 |||||||||||||||| | |||||| |||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaagtaagtcatttgtg-----------------acatatatttagtatt-attttttttggt 3449239  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||  |||| ||||||| |||||||||| ||||||||    
T  3449238 aaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgatt 3449148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 150 - 365
Target Start/End: Original strand, 42696920 - 42697144
Alignment:
Q  150 tccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataa 241  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||||        |||||||| || ||||||||||||||||||||||| ||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataa 42697019  T
Q  242 catatatttagtattaaattttttg-ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatc 340  Q
    ||||||||| |||||   ||||||  |||||||||||||||||| |||||||| ||||  ||||| ||||||||||||||||||||  |||| |||||||    
T  42697020 catatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaatc 42697119  T
Q  341 cttcgattttgattgcgattgtaca 365  Q
    |||| |||||  |||||||| ||||    
T  42697120 cttcaattttagttgcgattttaca 42697144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 86 - 396
Target Start/End: Original strand, 21963438 - 21963758
Alignment:
Q  86 aaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 185  Q
    ||||||||||||||||||||||||| || ||||||  ||||||||||||||| ||||||| |||||||||||| ||||| ||||||  ||||||||||||    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  186 attttga-------ttgcgatttcttataaattaggtcatttatgac--tatataccattcataacatatatttagtatta--aattttttgggtaaaat 274  Q
    |||||||       || |||||||||||  | || ||||||||||||  ||||||| ||| ||||| ||||||||||||||  ||||||||  |||||||    
T  21963538 attttgatagcgattttcgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattattaattttttttgtaaaat 21963636  T
Q  275 ccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctga 373  Q
    ||||| |||| ||||  | |||||| ||||| ||||||||||||| ||||||  ||||||||||| |||  |||||| ||| |||| ||| ||  || ||    
T  21963637 ccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtc-ga 21963735  T
Q  374 ttttgctattccctttcgacctg 396  Q
    ||||||| ||| |||||||||||    
T  21963736 ttttgctcttctctttcgacctg 21963758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 86 - 396
Target Start/End: Original strand, 21985874 - 21986194
Alignment:
Q  86 aaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 185  Q
    ||||||||||||||||||||||||| || ||||||  ||||||||||||||| ||||||| |||||||||||| ||||| ||||||  ||||||||||||    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  186 attttga-------ttgcgatttcttataaattaggtcatttatgac--tatataccattcataacatatatttagtatta--aattttttgggtaaaat 274  Q
    |||||||       || |||||||||||  | || ||||||||||||  ||||||| ||| ||||| ||||||||||||||  ||||||||  |||||||    
T  21985974 attttgatagcgattttcgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattattaattttttttgtaaaat 21986072  T
Q  275 ccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctga 373  Q
    ||||| |||| ||||  | |||||| ||||| ||||||||||||| ||||||  ||||||||||| |||  |||||| ||| |||| ||| ||  || ||    
T  21986073 ccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtc-ga 21986171  T
Q  374 ttttgctattccctttcgacctg 396  Q
    ||||||| ||| |||||||||||    
T  21986172 ttttgctcttctctttcgacctg 21986194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 75 - 416
Target Start/End: Complemental strand, 22356184 - 22355848
Alignment:
Q  75 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttctt-caccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||  || ||| || || ||||||| | || ||| ||||||||||||| ||||||      
T  22356184 ccattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataag 22356085  T
Q  174 caaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatttttt 265  Q
    ||||||||||  ||||||||||||||||        |||||||| || ||||||||          ||||| |||||||||||||| |||||   |||||    
T  22356084 caaaatccatgaattttgattgcgattttacgatttcttataaactaagtcattta----------ccatttataacatatatttattattattattttt 22355995  T
Q  266 gggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 365  Q
     |||||||||||||||||| | ||||| |||||||||||    |||||||| ||||||||| ||||| ||||||| || |||||||||||||||| |||     
T  22355994 tggtaaaatccatcgattttgtttgcggttttacaattt----tatcgattttacaaaagtccttgaataaaatcttttgattttgattgcgattttacg 22355899  T
Q  366 tgttctgattttgctattccctttcgacctggagtaaagtcccgattttga 416  Q
     || | |||||||||||||| ||||||||||  ||||||| ||||||||||    
T  22355898 agtcccgattttgctattccatttcgacctgatgtaaagttccgattttga 22355848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 30727820 - 30727696
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||| ||||||||| |||||||||| |||||||| | |||||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  177 aatccatcgattttgattgcgattt 201  Q
    ||| |||||||||||||||||||||    
T  30727720 aattcatcgattttgattgcgattt 30727696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 25870294 - 25870160
Alignment:
Q  226 tatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaag 325  Q
    ||||||||||| ||||||||||||||||||||   ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||      
T  25870294 tatataccatttataacatatatttagtattattgttttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaact 25870195  T
Q  326 ttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |  ||||||||||||||| ||||||| ||||||||    
T  25870194 tagttgagtaaaatcctttgattttggttgcgatt 25870160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 24649818 - 24649693
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga-ca 175  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||| |||||||| | ||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaagca 24649719  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    |||| |||| ||||||| || |||||    
T  24649718 aaattcatcaattttgactgtgattt 24649693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 8592293 - 8592178
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  ||   |||||||||||| ||||||||| || ||||||    
T  8592293 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcgacttgaagtaaa 8592194  T
Q  404 gtcccgattttgacaa 419  Q
    |||||||||| |||||    
T  8592193 gtcccgatttcgacaa 8592178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 196 - 350
Target Start/End: Complemental strand, 15515258 - 15515106
Alignment:
Q  196 cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgatt 295  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||| |||||  |||   |||    
T  15515258 cgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtatt--atttttttggtaaaatccatggatttttattataatt 15515161  T
Q  296 ttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgatttt 350  Q
    |||||||||| | ||  ||||||| ||||||  ||||||||||| ||||||||||    
T  15515160 ttacaatttcttctaatgattctataaaagtagttgagtaaaatacttcgatttt 15515106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 214 - 419
Target Start/End: Original strand, 27676580 - 27676786
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||||||||||  ||| ||||||||||||||  |||   ||| ||| |||||||||||| ||||| ||||| |||||||| ||||| ||||||    
T  27676580 gtcatttatgactatatataatttataacatatatttaacattgtttttgttttggtaaaatccattgattttgattgtgattttacgatttcttatatc 27676679  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgt-acatgttctgattttgctattccctttcgacctggagtaaagtcccgat 411  Q
    |||| |||||||||  |||||||||||| ||||||||||||||||||| | | || ||| ||||||||| |||||||||||| || || ||| ||| |||    
T  27676680 gattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaagattttc-gattttgctcttccctttcgacttgaagcaaaatcctgat 27676778  T
Q  412 tttgacaa 419  Q
    ||| ||||    
T  27676779 tttaacaa 27676786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 239 - 396
Target Start/End: Original strand, 13286113 - 13286271
Alignment:
Q  239 taacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaa 337  Q
    ||||||||| |||||||||  ||| ||| ||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||||||||  |||||||||    
T  13286113 taacatatagttagtattatttttgttttggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaa 13286212  T
Q  338 atccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctg 396  Q
    ||| || |||||||||||||||| |||  ||| ||||||| || ||||||| |||||||    
T  13286213 atcttttgattttgattgcgattttacgagttttgatttttctcttcccttccgacctg 13286271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 6136543 - 6136379
Alignment:
Q  223 gactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctaca 321  Q
    |||||||||| |||  ||||||||| |||||||||  ||| ||| |||||||||||||||||| ||||| |||||||| ||||| ||||||||||||| |    
T  6136543 gactatatacaatt--taacatatagttagtattatttttgttttggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctata 6136446  T
Q  322 aaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctt 388  Q
    |||||  |||||||||||| || |||||||||||||||| |||   || |||||||||| |||||||    
T  6136445 aaagtagttgagtaaaatcttttgattttgattgcgattttacgatttttgattttgcttttccctt 6136379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 25870506 - 25870389
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttc----aacgacttaaatccatagtagaatcccaaaata 171  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    ||||||| |||| | |||||||| | |||||||    
T  25870506 cattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaata 25870407  T
Q  172 gacaaaatccatcgattt 189  Q
    | ||||||||||||||||    
T  25870406 ggcaaaatccatcgattt 25870389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 15806635 - 15806531
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||| |||| |||||||||| |||||||||||| || ||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaacaggca 15806537  T
Q  176 aaatcc 181  Q
    ||||||    
T  15806536 aaatcc 15806531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||| |||||| ||||||||| | |||| |||||||||| |||||||||||||||  |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  176 aaatcc 181  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 3041458 - 3041570
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||  || | |||||||||| ||| ||||||| || ||||||    
T  3041458 tcctacatcgtttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaa 3041557  T
Q  404 gtcccgattttga 416  Q
     ||||||||||||    
T  3041558 atcccgattttga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 10873065 - 10872971
Alignment:
Q  87 aaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 181  Q
    ||||||||| | ||||||||||||||||||||||||||  || |||||||||||||||| |||||||||| |||||| |||||||| ||||||||    
T  10873065 aaatcccgattgaaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 17796267 - 17796368
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||| |||||||||| || ||||||||| ||||||| |||||||||||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||||    
T  17796267 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagaca 17796366  T
Q  176 aa 177  Q
    ||    
T  17796367 aa 17796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 19104707 - 19104808
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||| |||||||||| || ||||||||| ||||||| |||||||||||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||||    
T  19104707 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagaca 19104806  T
Q  176 aa 177  Q
    ||    
T  19104807 aa 19104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 267 - 419
Target Start/End: Complemental strand, 10872646 - 10872494
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacat 366  Q
    ||||||||||||| ||||  |||  |||||||| ||||| |||||||||||| |||||||  || ||||||||||||| ||||||||||||||| ||       
T  10872646 ggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatga 10872547  T
Q  367 gttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     || ||||||| || |||||||| |||||| |||||| ||| |||||||||||    
T  10872546 tttttgatttttctcttcccttttgacctgaagtaaaatcctgattttgacaa 10872494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 17796376 - 17796477
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||  |||||| |||| ||||||| ||| |||| ||||| ||||||| ||||||||||    
T  17796376 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagaca 17796475  T
Q  176 aa 177  Q
    ||    
T  17796476 aa 17796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 17796485 - 17796586
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||  ||| ||||||| ||||||| ||||||||  |||||| |||||||||||| |||||||| ||||| ||||||| ||||||||||    
T  17796485 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagaca 17796584  T
Q  176 aa 177  Q
    ||    
T  17796585 aa 17796586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 19104816 - 19104917
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||  |||||| |||| ||||||| ||| |||| ||||| ||||||| ||||||||||    
T  19104816 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagaca 19104915  T
Q  176 aa 177  Q
    ||    
T  19104916 aa 19104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 19104925 - 19105026
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||  ||| ||||||| ||||||| ||||||||  |||||| |||||||||||| |||||||| ||||| ||||||| ||||||||||    
T  19104925 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagaca 19105024  T
Q  176 aa 177  Q
    ||    
T  19105025 aa 19105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 8560351 - 8560239
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||  ||  ||   |||||||||| ||||||| ||| || ||||||    
T  8560351 tcctatattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttgacttgaagtaaa 8560252  T
Q  404 gtcccgattttga 416  Q
    |||||||||||||    
T  8560251 gtcccgattttga 8560239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 306 - 419
Target Start/End: Complemental strand, 20766793 - 20766680
Alignment:
Q  306 ctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagt 405  Q
    ||||||||||||| ||||||  ||||||||||||  ||||||||||||||||||| |||  ||   |||||||||| || |||||||  || ||||||||    
T  20766793 ctatatcgattctccaaaagcccttgagtaaaatttttcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagtaaagt 20766694  T
Q  406 cccgattttgacaa 419  Q
    ||||||||||||||    
T  20766693 cccgattttgacaa 20766680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 18014226 - 18014338
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    |||||||||| || || |||||| ||||||||||||||||||||||||||||||||| |||  || |  ||||||||| ||| |||  || || ||||||    
T  18014226 tcctatatcggttttataaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttgctactccattttaacttgaagtaaa 18014325  T
Q  404 gtcccgattttga 416  Q
    |||||||||||||    
T  18014326 gtcccgattttga 18014338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 22971044 - 22971155
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||  || | |||||||||| | |||||  || || ||||||    
T  22971044 tcctacatcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctact-ccttttaacttgaagtaaa 22971142  T
Q  404 gtcccgattttga 416  Q
    ||||| |||||||    
T  22971143 gtcccaattttga 22971155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 316 - 419
Target Start/End: Original strand, 41671426 - 41671529
Alignment:
Q  316 tctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttg 415  Q
    |||||||||||  ||||||||||||||||||||||| |||||||| ||||  |   ||||||||| ||| ||||||||||| || ||| |||||||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaatcccgattttg 41671525  T
Q  416 acaa 419  Q
    ||||    
T  41671526 acaa 41671529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 197 - 360
Target Start/End: Complemental strand, 9152984 - 9152823
Alignment:
Q  197 gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatt-ttttgggtaaaatccatcgatttcgattgcgatt 295  Q
    ||||||||||||| || || ||||||||||||||| |||  ||| |||||  ||| |||||   | |||| ||||||||| |||||||| ||||| ||||    
T  9152984 gatttcttataaactaagttatttatgactatatatcatgtatagcatat--ttaatattattgtgtttttggtaaaatctatcgattttgattgtgatt 9152887  T
Q  296 ttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||| || ||||||||||||||| |  |||||| ||||| |||||||||| || |||||    
T  9152886 ttacaatttcata-atcgattctacaaaaatagttgagtcaaatctttcgattttggttacgatt 9152823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 28135960 - 28136053
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||  || ||||| |||| | ||||||||||||| |||||| ||| |||||||||  ||||||||||||||||||||||||| ||||||    
T  28135960 ggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgatt 28136053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 278 - 419
Target Start/End: Original strand, 27090645 - 27090792
Alignment:
Q  278 tcgatttcgattgcgattttacaattt------cctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttct 371  Q
    ||||||| |||||||||||||| ||||      |||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||  |||   ||      
T  27090645 tcgattttgattgcgattttacgattttgctatcctatatcgattatacaaaattccttgagtaaaatccttcgatttttattgcgatcttacgatttgc 27090744  T
Q  372 gattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     ||||| |||||||||||||||||  |||||| || |||||| |||||    
T  27090745 aatttttctattccctttcgacctaaagtaaaatctcgatttcgacaa 27090792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 21553786 - 21553672
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaat-ccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaa 402  Q
    ||||||||| ||||||||||||| ||||| |||||  |||||||||||||||||||||  ||  || | |||||| ||| ||||||||||  || |||||    
T  21553786 tcctatatcaattctacaaaagtccttgaataaaaaaccttcgattttgattgcgatt--accagtcccgatttttctactccctttcgatttgaagtaa 21553689  T
Q  403 agtcccgattttgacaa 419  Q
    |||||||||||| ||||    
T  21553688 agtcccgatttttacaa 21553672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 273 - 396
Target Start/End: Original strand, 17796771 - 17796892
Alignment:
Q  273 atccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctg 372  Q
    ||||||| |||| |||| ||||||||| ||||| |||  |||||||||||||||  ||||||||||| |||||||||| ||||| ||| |||   || |     
T  17796771 atccatcaattttgatttcgattttacgatttcttat--cgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgatttttt 17796868  T
Q  373 attttgctattccctttcgacctg 396  Q
    ||||| || |||||||||||||||    
T  17796869 atttttcttttccctttcgacctg 17796892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 273 - 396
Target Start/End: Original strand, 19105211 - 19105332
Alignment:
Q  273 atccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctg 372  Q
    ||||||| |||| |||| ||||||||| ||||| |||  |||||||||||||||  ||||||||||| |||||||||| ||||| ||| |||   || |     
T  19105211 atccatcaattttgatttcgattttacgatttcttat--cgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgatttttt 19105308  T
Q  373 attttgctattccctttcgacctg 396  Q
    ||||| || |||||||||||||||    
T  19105309 atttttcttttccctttcgacctg 19105332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 19348788 - 19348900
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||||||||||| || |||||| ||| | ||||||||||| ||||||||||||||| |||  ||   |||||||||| ||||||| ||| || ||||||    
T  19348788 tcctatatcgattttataaaagtccttcaataaaatccttccattttgattgcgattttacgagtctcgattttgctactcccttttgacttgaagtaaa 19348887  T
Q  404 gtcccgattttga 416  Q
    ||| | |||||||    
T  19348888 gtctcaattttga 19348900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 24649574 - 24649528
Alignment:
Q  373 attttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24649574 attttgctattccctttcgacctgaagtaaagtcccaattttgacaa 24649528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatag 156  Q
    ||||||||||||| |||| ||||||| |||||| |||||||||| |||||| ||||| ||||  |||| ||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 473 - 576
Target Start/End: Complemental strand, 25296659 - 25296557
Alignment:
Q  473 gagcactgttatttatttagatggaaattgtcccgatcagattgcgaatagcagttaaccaattacctctttgcctgcccacaaaacaaggaaggtggtg 572  Q
    ||||| || ||||||| ||||||||||||||| |||||| | || ||||| || ||||||||| |||| | || ||| ||||| ||||| ||||||||||    
T  25296659 gagcagtgctatttatctagatggaaattgtctcgatcatactgtgaataacaattaaccaatcacctttctgtctggccacacaacaa-gaaggtggtg 25296561  T
Q  573 ctat 576  Q
    ||||    
T  25296560 ctat 25296557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 421
Target Start/End: Original strand, 13006089 - 13006176
Alignment:
Q  333 gtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
    |||||||| ||| ||||||||||||||| ||| || |||  |||||||||||||||||||||||  || ||| |||||||||||||||||    
T  13006089 gtaaaatcattcaattttgattgcgattttacgattttca-attttgctattccctttcgacctaaagcaaa-tcccgattttgacaatc 13006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 27055328 - 27055445
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    |||| ||||||||||||||| ||| || ||||||| | ||| ||||| ||||||||| |||   ||  |||||| ||||| |||||  ||||| ||||||    
T  27055328 tcctgtatcgattctacaaatgttttttagtaaaacctttcaattttaattgcgattttacgatttgcgattttactatttcctttttacctgaagtaaa 27055427  T
Q  404 gtcccgattttgacaatc 421  Q
     | |||||||||||||||    
T  27055428 attccgattttgacaatc 27055445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 6861123 - 6861039
Alignment:
Q  215 tcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgatttta 298  Q
    ||||||||||||||| || ||| |||||||||| ||||  |||  ||| ||| |||| ||||||||||||| |||||||||||||    
T  6861123 tcatttatgactatagacaatttataacatatagttagctttatttttgttttggtagaatccatcgattttgattgcgatttta 6861039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 42696870 - 42696910
Alignment:
Q  81 ttgtcaaaatcccgacttaaatcctaaaatccaggattttg 121  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttg 42696910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 19348685 - 19348770
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||||||||||||||| | ||| ||||||||||||||  ||||  ||| ||| |||| ||||| ||||||| ||||||||||||||    
T  19348685 gtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtataatcc-tcgattttgattgcgattttac 19348770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 2e-98; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 71 - 421
Target Start/End: Complemental strand, 31238112 - 31237753
Alignment:
Q  71 acaaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaat 170  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||| ||||||||||||  |||||    
T  31238112 acaatcattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaat 31238013  T
Q  171 agacaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatattta-gtattaaatt 261  Q
    ||  |||||||||||||||||||||||||||        |||||||| || ||||||||||| ||||||||||| |||||||||||| | ||||||   |    
T  31238012 aggaaaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatataccatttataacatatattcatgtattattat 31237913  T
Q  262 ttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    |||| |||||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||     
T  31237912 tttttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattt 31237813  T
Q  362 tacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
    |||  || | |||||| ||||||||||| || ||| |||||||||| |||||||||||||    
T  31237812 tacgagtcccgattttactattcccttttgaactgaagtaaagtcctgattttgacaatc 31237753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 1404782 - 1405133
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||  ||    
T  1404782 cattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgca 1404881  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||||        |||||||||||| | || |||||||||||||||| |||||| |||||||||| |||| | ||   || ||      
T  1404882 aaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacaccatttataacatatacttaggaatattattatttt 1404981  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
     | |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |    
T  1404982 tttaaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgag 1405081  T
Q  368 ttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | | |||||||||||||||||| |||||  | ||||||| ||||||||||||    
T  1405082 taccgattttgctattcccttttgacctaaattaaagtctcgattttgacaa 1405133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 76 - 419
Target Start/End: Original strand, 20063713 - 20064073
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| |  |||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagt-atta--------a 258  Q
    |||| |||||||||| ||||||||||        ||||| || ||  |||||||||||| ||||||||| || |||| |||||| | ||||        |    
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacatgtatttatttattatttatttta 20063912  T
Q  259 attttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcga 358  Q
     |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  20063913 ttttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcga 20064012  T
Q  359 ttgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    || |||  ||   ||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  20064013 ttttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgattttgacaa 20064073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 76 - 360
Target Start/End: Original strand, 36429847 - 36430139
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||||||| || | ||||| |||||| |||||||| ||    
T  36429847 cattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggca 36429946  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||||        |||||||||||||| || || ||||||||||||||| ||||  ||||||||||||||||||   |||||| |    
T  36429947 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatcatttctaacatatatttagtatttttttttttag 36430046  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||||||||| |||||| ||||||   |||  | |||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  36430047 gtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatccttcgattttgattgcgatt 36430139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 78 - 365
Target Start/End: Complemental strand, 35566082 - 35565787
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    |||||||||||||||| |||||||||  ||||| |||||||||| |||||||||||  ||||| |||| |||||||| ||||||||||||||||| ||||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  178 atccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    |||||||||||||||||||        |||||||||||||  | ||||||||||||||||||| ||| |||||||||||||||||||   |||||| |||    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaacaaagtcatttatgactatatacaatttataacatatatttagtatt---tttttttggt 35565886  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgag---taaaatccttcgattttgattgcgattgtaca 365  Q
    ||||||||||||||| ||||| |||||||  ||||| ||||||||||||||||||||  |||||   |||||||||||||||||  |||||||| ||||    
T  35565885 aaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttaca 35565787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 76 - 360
Target Start/End: Complemental strand, 15588979 - 15588693
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||| ||||||||||||||||||| || |||||| |||||||||| | ||||||||||||||||| ||| |||| |||||||||||| |||||||||||    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||| |||| |||| ||||||||||        | |||||| || ||||||||||| ||||||||||| ||  ||||||||||||||||  |||||| |    
T  15588880 aaatcaatcgttttttattgcgattttacgatttcatataaactaagtcatttatgattatataccatttat--catatatttagtatta--tttttttg 15588785  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||  ||||  ||||||||||||||||||||||| ||||||||    
T  15588784 gtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgattttggttgcgatt 15588693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 238 - 419
Target Start/End: Original strand, 30432984 - 30433165
Alignment:
Q  238 ataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaa 337  Q
    ||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  30432984 ataacatatatttagtattaattttttggggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaa 30433083  T
Q  338 atccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||| ||||||||||||||||||| ||   || | |||||| ||||| | |||||||||| ||||| ||||||||||||||||    
T  30433084 atcattcgattttgattgcgattttatgagtcccgatttttctattgcttttcgacctgaagtaatgtcccgattttgacaa 30433165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 79 - 304
Target Start/End: Original strand, 31578007 - 31578238
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    ||||||||||||||||||||||||  ||||||  | ||||||| || |||||||||||||||||| |||||||| ||||||||||| ||||||  |||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  179 tccatcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggta 270  Q
    |||||| |||||||||||        ||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||| | |||||||| ||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaactaagtcatttatgactatataccatttataacatatatttagtatt-atttttttggtta 31578204  T
Q  271 aaatccatcgatttcgattgcgattttacaattt 304  Q
    |||||||||||||   ||||||||||||||||||    
T  31578205 aaatccatcgattataattgcgattttacaattt 31578238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 229 - 419
Target Start/End: Complemental strand, 19262285 - 19262095
Alignment:
Q  229 ataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttc 328  Q
    |||||||| |||||||||| |||||||||   ||||| |||||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |    
T  19262285 ataccatttataacatatagttagtattattattttttggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtcc 19262186  T
Q  329 ttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||| ||||||||||||||||||| |||  || | ||||||||||||||| |||||| || |||||||| ||||||| |||||    
T  19262185 ttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctattcccattcgacttgaagtaaagttccgatttcgacaa 19262095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 30432418 - 30432593
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| || |||||| |||||||| ||||||||  |||||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  30432418 cattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagaca 30432517  T
Q  176 aaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataaca 243  Q
    ||||||||||||||||||||        |||||||||||||| || ||||||||| ||||||||||||| ||||||    
T  30432518 aaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccatttataaca 30432593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 23863451 - 23863326
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||||||||||||| |||||||| || |||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||| ||    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    |||||||||||||||| |||||||||    
T  23863351 aaatccatcgattttggttgcgattt 23863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 214 - 419
Target Start/End: Complemental strand, 25539130 - 25538924
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||||||||||| ||  ||||||||||||||| ||||  | | ||| ||||||||| |||||||| |||||| ||||||||||||  ||||||    
T  25539130 gtcatttatgactatatacaatatataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaattttttatatc 25539031  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgatt 412  Q
    ||||||||||||||  || ||||||||||||  ||||||||||||||| |||  |  | |||||| ||||||||||||||||||  ||||||| ||||||    
T  25539030 gattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagacccgatttttctattccctttcgacctgatgtaaagtaccgatt 25538931  T
Q  413 ttgacaa 419  Q
    |||||||    
T  25538930 ttgacaa 25538924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 196 - 362
Target Start/End: Complemental strand, 1690730 - 1690564
Alignment:
Q  196 cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgatt 295  Q
    |||||||||||||| || ||| ||||||||||||||||||| |||| ||||||||| |||||   ||||| ||||||||  |||||||| ||||||||||    
T  1690730 cgatttcttataaactaagtcttttatgactatataccatttataaaatatatttaatattattattttttggtaaaatttatcgattttgattgcgatt 1690631  T
Q  296 ttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgt 362  Q
    |||| | ||| ||||||||||  ||||||||  || |||||| ||||||| ||||| ||||||||||    
T  1690630 ttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttttggttgcgattgt 1690564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 79 - 201
Target Start/End: Complemental strand, 25539353 - 25539231
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    |||||| |||||||||| |||||||||||||| || || ||||  | ||||||||||||||||||||||||||||||| ||||||| ||||||  |||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  179 tccatcgattttgattgcgattt 201  Q
    |||||||||||||| ||||||||    
T  25539253 tccatcgattttgactgcgattt 25539231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 974573 - 974686
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggagtaa 402  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |  ||| |||||||||| ||||||||||| || |||||    
T  974573 tcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtttccgattttgctactccctttcgacttgaagtaa 974672  T
Q  403 agtcccgattttga 416  Q
    ||||||||| ||||    
T  974673 agtcccgatattga 974686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 27523990 - 27523881
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  || | |||||||||| ||||||||||| || ||||||    
T  27523990 tcctacatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 27523891  T
Q  404 gtcccgattt 413  Q
    ||||||||||    
T  27523890 gtcccgattt 27523881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 217 - 419
Target Start/End: Original strand, 8428369 - 8428572
Alignment:
Q  217 atttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgat 315  Q
    |||||||||||||||  ||| |||| ||||| |||| ||||  ||| ||| |||| ||| |||||||||  ||||||||||||| ||||   |||| |||    
T  8428369 atttatgactatatataatttataatatatagttagcattatttttgttttggtataattcatcgatttgtattgcgattttacgatttttgatattgat 8428468  T
Q  316 tctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttg 415  Q
    ||||||||| |  ||||| |||||||||||||||||||||||||| || |  || ||||||| |||||||||||||||||  || ||| |||||||||||    
T  8428469 tctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgacctaaagcaaaatcccgattttg 8428568  T
Q  416 acaa 419  Q
    ||||    
T  8428569 acaa 8428572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 77 - 201
Target Start/End: Original strand, 19491855 - 19491980
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatccta--aaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 174  Q
    ||||||||||||||| ||| ||||||||||  ||||| ||||||||| ||||||||||| ||| ||||||| |||||||||| ||||| |||||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggt 19491953  T
Q  175 aaaatccatcgattttgattgcgattt 201  Q
    |||||||||||||||||||||||||||    
T  19491954 aaaatccatcgattttgattgcgattt 19491980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 1690893 - 1690785
Alignment:
Q  75 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 174  Q
    |||||||||||||||  |||||||||||| ||||||  |||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||| |    
T  1690893 ccattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaataggc 1690794  T
Q  175 aaaatccat 183  Q
    |||| ||||    
T  1690793 aaaacccat 1690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 16766930 - 16767076
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||||| ||||| ||| |||||| |||||||| ||||  ||| ||| |||||| ||| | ||||| |||||||||||||| ||||| ||||||    
T  16766930 gtcatttatgactgtatacaatttataacaaatatttagcattatttttgttttggtaaa-tcctttgattttgattgcgattttacgatttcttatatc 16767028  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||| ||||||  |||||||||||||||| |||||||||||||||    
T  16767029 gattctataaaagtagttgagtaaaatccttcaattttgattgcgatt 16767076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 310 - 416
Target Start/End: Complemental strand, 20034110 - 20034004
Alignment:
Q  310 atcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccg 409  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||  ||   |||||||||| ||||||||||| || ||||||||||||    
T  20034110 atcgattctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcgacttgaagtaaagtcccg 20034011  T
Q  410 attttga 416  Q
    |||||||    
T  20034010 attttga 20034004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 19245824 - 19245939
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    |||||||||||||||||||||||  || |||||||||||| |||||||||||||||| |||   || |||||||||||||||||||| || || || |||    
T  19245824 tcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgatttttgattttgctattccctttcaacttgaagcaaa 19245923  T
Q  404 gtcccgattttgacaa 419  Q
     |||||||||||||||    
T  19245924 atcccgattttgacaa 19245939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 307 - 417
Target Start/End: Complemental strand, 21869212 - 21869102
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtc 406  Q
    ||||||||||||||||||||  |||| ||||||||||||||||| ||||||||| ||   || | |||||| ||||||||||||||| || |||||||||    
T  21869212 tatatcgattctacaaaagtcattgaataaaatccttcgattttaattgcgattttaagagtcccgatttttctattccctttcgacttgaagtaaagtc 21869113  T
Q  407 ccgattttgac 417  Q
    |||||||||||    
T  21869112 ccgattttgac 21869102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 13502639 - 13502511
Alignment:
Q  233 cattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttg 331  Q
    |||| |||||||||||||| |||||  ||| ||| |||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||| |  |||    
T  13502639 catttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttg 13502540  T
Q  332 agtaaaatccttcgattttgattgcgatt 360  Q
    | ||| ||||||| ||||||||| |||||    
T  13502539 actaatatccttcaattttgattacgatt 13502511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 310 - 416
Target Start/End: Original strand, 7302023 - 7302129
Alignment:
Q  310 atcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccg 409  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||  || | ||||||||||  ||| ||| || || ||||||||||||    
T  7302023 atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctaccccccttcaacttgaagtaaagtcccg 7302122  T
Q  410 attttga 416  Q
    |||||||    
T  7302123 attttga 7302129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 214 - 359
Target Start/End: Original strand, 27406935 - 27407081
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||| |||||||||  || |||| |||||||||| ||||  ||| ||| ||| ||||||||| |||| |||||||||||||  ||||| |||||     
T  27406935 gtcatttattactatatacagtttataatatatatttagcattatttttgttttggtgaaatccatcaattttgattgcgattttatgatttcttatatt 27407034  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    |||| | |||||||  ||||||||||| ||| |||||||||||||||    
T  27407035 gattatccaaaagtagttgagtaaaattcttggattttgattgcgat 27407081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 34841728 - 34841816
Alignment:
Q  217 atttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaattt 304  Q
    |||||||||||||||| ||| |||||||||||||| |||||  ||| ||||| || ||||||||||||| |||||||||||||| ||||    
T  34841728 atttatgactatatacaatttataacatatatttattattatttttgtttggatagaatccatcgattttgattgcgattttacgattt 34841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 17995054 - 17995157
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| ||||| |||||||||| |||||||||||| |||||| || ||| |||||| ||||||||| |||| | ||| | ||| ||||||||| ||    
T  17995054 cattgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaataggca 17995153  T
Q  176 aaat 179  Q
    ||||    
T  17995154 aaat 17995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 5395780 - 5395674
Alignment:
Q  74 accattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 173  Q
    |||||||||||||||||   ||| |||||| ||||||  ||||||||| |||||| |||| ||| || |||| |||||||||| |||||| ||||||||     
T  5395780 accattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatagg 5395681  T
Q  174 caaaatc 180  Q
    |||||||    
T  5395680 caaaatc 5395674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 15266081 - 15266187
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||  || |||||||||||||| ||||||||||| ||||| |||| |||||| || | ||||||||  || ||| |||||||||  |    
T  15266081 cattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaataggaa 15266180  T
Q  176 aaatcca 182  Q
    |||||||    
T  15266181 aaatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 19492079 - 19492168
Alignment:
Q  217 atttatgactatataccattcataacatatatttagtatta--aattttttgggtaaaatccatcgatttcgattgcgattttacaattt 304  Q
    |||||||||||||||| ||| ||||||||||||||| ||||  | |||||| |||||||||||||||||| |||| || |||||| ||||    
T  19492079 atttatgactatatacaatttataacatatatttagcattattattttttttggtaaaatccatcgattttgattacggttttacgattt 19492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 34578124 - 34578210
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttc 390  Q
    ||||| ||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||   || | |||||||||| ||||||||    
T  34578124 tcctacatcgattctacaaaagtccatgagtaaaatccttcaattttgattgcgattttatgagtcccgattttgctactccctttc 34578210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 171  Q
    ||||||||||||||   |||||||||| ||||||  ||||||||  || ||| |||||||||||||| | |||||||||| ||||||| ||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 31023259 - 31023325
Alignment:
Q  113 aggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 179  Q
    ||||||||| |||||| ||||| |||||||||| |||| ||||||||||||| ||||||| ||||||    
T  31023259 aggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaat 31023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 337
Target Start/End: Complemental strand, 5395515 - 5395384
Alignment:
Q  206 taaattaggtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaattt 304  Q
    |||||| |||||||||||||||||||| ||| ||||||||| || |  ||||  ||| ||| |||||||||  ||||||| |||||  ||||||  ||||    
T  5395515 taaattgggtcatttatgactatatacaatttataacatattttgaacattatttttgttttggtaaaatctttcgattttgattgtaattttaagattt 5395416  T
Q  305 cctatatcgattctacaaaagttcttgagtaaa 337  Q
    | ||||||||||||| ||||||  |||||||||    
T  5395415 cttatatcgattcta-aaaagtaattgagtaaa 5395384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 15627654 - 15627715
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcacctt 137  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||  ||| ||||||||    
T  15627654 cattattgtcaaaatcccgacttaaatcctaaaatttatgattttgtggttttattcacctt 15627715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 29660893 - 29660938
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgt 122  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||    
T  29660893 attgttgtcaaaaatccgacttaaatcctaaaatctaggattttgt 29660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 31023450 - 31023531
Alignment:
Q  218 tttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgatttta 298  Q
    ||||||||||| ||| ||| ||||||||||||||  ||||  ||| ||| |||||||||||||||||| |||| ||||||||    
T  31023450 tttatgactatttactatttataacatatatttaacattatttttattttggtaaaatccatcgattttgattacgatttta 31023531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 19245152 - 19245196
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggatttt 120  Q
    |||||||||||||||||||||||||||  |||||| |||||||||    
T  19245152 cattgttgtcaaaatcccgacttaaattttaaaattcaggatttt 19245196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 19257647 - 19257568
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgacttt-cttcaccttcaacgacttaaatccatag 156  Q
    |||||| |||||||| |||||||| |||||||||||| |||||| ||||||| ||| | ||||||||||| |||| |||||    
T  19257647 attgttatcaaaatcgcgacttaagtcctaaaatccaagattttatgactttacttga-cttcaacgactcaaattcatag 19257568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 27750282 - 27750194
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcc 164  Q
    |||||||||||||||| |||||||| ||| ||||| || ||||||| ||||||  | | ||| ||||||| |||||||||  |||||||    
T  27750282 cattgttgtcaaaatcgcgacttaagtcccaaaatacaagattttgcgacttttcttaacttaaacgactcaaatccataacagaatcc 27750194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 34841592 - 34841648
Alignment:
Q  113 aggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    |||||| || |||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  34841592 aggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaa 34841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 974470 - 974555
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||||||||||||||| | ||| ||||||||||||||  ||||  ||| ||| |||| ||||| ||||||| ||||||||||||||    
T  974470 gtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgattgcgattttac 974555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 41002157 - 41002242
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||  ||| ||| |||| ||||| ||||||| |||| |||||||||    
T  41002157 gtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaatcc-tcgattttgattacgattttac 41002242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 15627944 - 15628029
Alignment:
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 354  Q
    ||||||||||||||||  ||| | ||||||| || |  ||| | || |||||||||||  |||||||||| |||||||||||||||    
T  15627944 taaaatccatcgattttaatttcaattttacgatgtattatgtagactctacaaaagtagttgagtaaaaaccttcgattttgatt 15628029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 6e-98; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 71 - 421
Target Start/End: Original strand, 4247350 - 4247708
Alignment:
Q  71 acaaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaat 170  Q
    ||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  4247350 acaacaattgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaat 4247449  T
Q  171 agacaaaatccatcgattttgattgcgatt--------tcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattt 262  Q
    || |||||| ||||||||||||||||||||        ||||||||| || |||||||||||||||||| ||||  |||||||||||||||||||  |||    
T  4247450 aggcaaaattcatcgattttgattgcgattttatgatttcttataaactaagtcatttatgactatatatcatttgtaacatatatttagtattattttt 4247549  T
Q  263 tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgt 362  Q
    ||| |||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||| | |||||||||||||||| || ||||||||||||| |    
T  4247550 tttaggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgatttt 4247649  T
Q  363 acatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaatc 421  Q
    ||   | |  |||||  |||||||||||||| || ||||||||||| ||||||||||||    
T  4247650 acgaatcccaatttttgtattccctttcgacttgaagtaaagtcccaattttgacaatc 4247708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 78 - 419
Target Start/End: Original strand, 5058530 - 5058878
Alignment:
Q  78 ttgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 177  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||||||||||||  ||||||| ||||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  178 atccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggt 269  Q
    ||||  ||||||||||||||||        |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||   ||||| |||    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattattttttggt 5058729  T
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgtt 369  Q
    ||| ||||||||||| |||||||||||||||||||  ||||||||||| |||||| | ||||| ||||||||||||||||||||||| ||| |||   ||    
T  5058730 aaagtccatcgattttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacgaatt 5058828  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    | |||||||||||||||||| || ||| ||||||||||||||||||||||    
T  5058829 ccgattttgctattcccttttgatctgaagtaaagtcccgattttgacaa 5058878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 76 - 396
Target Start/End: Complemental strand, 24725607 - 24725274
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||||||| ||    
T  24725607 cattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggca 24725508  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaatt-----t 262  Q
    ||||||||| ||||||||| ||||||        |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||  ||     |    
T  24725507 aaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattttattttt 24725408  T
Q  263 tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgt 362  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |    
T  24725407 tttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgatttt 24725308  T
Q  363 acatgttctgattttgctattccctttcgacctg 396  Q
    | | ||||  || |||||||| |||||| |||||    
T  24725307 aaaagttccaatattgctatttcctttcaacctg 24725274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 115 - 419
Target Start/End: Original strand, 17811385 - 17811698
Alignment:
Q  115 gattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt--------cttat 206  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||        |||||    
T  17811385 gattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacgatttcttat 17811484  T
Q  207 aaattaggtcatttatgactatataccattcataacatatatttagtattaa-attttttgggtaaaatccatcgatttcgattgcgattttacaatttc 305  Q
    ||| || ||||||||| | ||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||     
T  17811485 aaactaagtcatttataattatataccatttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgattttacaatttt 17811584  T
Q  306 ctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagt 405  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||   | | |||||||||||||||||| |||||| ||||||||    
T  17811585 ctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgacctgaagtaaagt 17811684  T
Q  406 cccgattttgacaa 419  Q
    ||||||||||||||    
T  17811685 cccgattttgacaa 17811698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 77 - 419
Target Start/End: Complemental strand, 44944978 - 44944624
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcac----cttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    ||||||||| | |||||||||||||||||| |||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  173 acaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt 264  Q
     |||||||||||||||||||||| |||||        |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||   ||||    
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatataccatttataacatatatttagtattattatttt 44944779  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    | |||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||  ||||||||| ||||||||| |||    
T  44944778 ttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttac 44944679  T
Q  365 atgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
      || | |  ||||||||| |||||||| ||| ||||||||||||||||||||||    
T  44944678 gagtcccgcatttgctatttcctttcgatctgaagtaaagtcccgattttgacaa 44944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 77 - 419
Target Start/End: Original strand, 5715290 - 5715631
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||| |||||||| ||||||||||| ||||||||  |||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttggg 268  Q
    ||| |||||||||||||||        |||||||||||||| || ||||||||||| ||||||||||| |||||||||||| | | ||    ||||| ||    
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatataccatttataacatatattcattttt----ttttttgg 5715484  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgt 368  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||  ||    
T  5715485 taaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacgagt 5715584  T
Q  369 tctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     | |||||| ||||| |||||||||    ||||||||||||||||||||||    
T  5715585 cccgatttttctatttcctttcgac----agtaaagtcccgattttgacaa 5715631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 83 - 419
Target Start/End: Complemental strand, 20571002 - 20570664
Alignment:
Q  83 gtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcca 182  Q
    |||||| ||||||||||||| || ||||||| ||||||||||||||||||| ||      || |||||| |||||||||||  |||||||||||||||||    
T  20571002 gtcaaactcccgacttaaattctgaaatccaagattttgtgactttcttcatct------acctaaatctatagtagaatctaaaaatagacaaaatcca 20570909  T
Q  183 tcgattttgattgc--------gatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaat 274  Q
    ||||||||||||||        ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||   ||||| |||||| |    
T  20570908 tcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatataccatttataacatatatttagtattattcttttttggtaaagt 20570809  T
Q  275 ccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgat 374  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||   ||    ||    
T  20570808 ccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtctcaat 20570709  T
Q  375 tttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||| ||||||||||| ||||| |||| |||||||||||||||||    
T  20570708 tttgttattccctttcaacctgaagtagagtcccgattttgacaa 20570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 76 - 421
Target Start/End: Original strand, 27221417 - 27221767
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| |||||||| |||||||| ||||||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||||  ||||| | ||    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgg 267  Q
    ||||||||||||||||||||||||        |||||||||| || ||||||||||||||||||||||| ||||||||||| |||| |    |||||| |    
T  27221517 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatatatatagttt----tttttttg 27221612  T
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatg 367  Q
    ||| ||||  |||||||  |||||||||||||||||||||| |||||||||||||||||    |||||||||||||||||||||||||||||| |||       
T  27221613 gtacaatcagtcgattttaattgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacgaa 27221712  T
Q  368 ttctgattttgctattccctttcgacct-ggagtaaagtcccgattttgacaatc 421  Q
    | | ||||||||||| | ||||||||||   ||||||||||||||||||| ||||    
T  27221713 tcccgattttgctatactctttcgacctaaaagtaaagtcccgattttgaaaatc 27221767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 76 - 360
Target Start/End: Original strand, 14055250 - 14055548
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||||| ||    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt--- 264  Q
    |||||||| |||||||||||||||        |||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||  |||||       
T  14055350 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatatatttaatattatctttttttt 14055449  T
Q  265 ---tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
       | |||||||||||| ||||| |||||||||||| ||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||    
T  14055450 ttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 14055548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 76 - 360
Target Start/End: Original strand, 14365278 - 14365576
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||||| ||    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  176 aaatccatcgattttgattgcgat--------ttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt--- 264  Q
    |||||||| |||||||||||||||        |||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||  |||||       
T  14365378 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatatatttaatattatctttttttt 14365477  T
Q  265 ---tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
       | |||||||||||| ||||| |||||||||||| ||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||    
T  14365478 ttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 14365576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 76 - 360
Target Start/End: Complemental strand, 8330175 - 8329882
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| ||| ||||| ||||||| || ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||  |    
T  8330175 cattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaa 8330076  T
Q  176 aaatccatcgattttgattgcgatttc--------ttataaattaggtcatttatgactatataccattc-ataacatatatttagtattaaattttttg 266  Q
    |||| ||| |||||| ||||||||||         ||||||| || |||||||||||||||||||||||  |||||||||| ||| |||| | ||||||     
T  8330075 aaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatatacttattatttatttttttt 8329976  T
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||||||||||| ||||| |||||| ||||||| ||||| |||||| |||||||||||||  ||||||||||||||| ||||||||||||||||    
T  8329975 ggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatt 8329882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 79 - 359
Target Start/End: Complemental strand, 8346660 - 8346370
Alignment:
Q  79 tgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 178  Q
    |||||||||||||| ||| |||||  ||||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  179 tccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatatacca-ttcataacatatatttagtatta-aattttttggg 268  Q
    |||||||||||| ||||        |||||||||||||| || ||||| |||| ||||||| || || ||||||||||||||||||||  ||||||| ||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatatatttagtattattatttttttgg 8346461  T
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    |||||||||| ||||  ||||| |||||||  ||||| |||||| |||||||||||||  ||||||||||||||| |||||||||||||||    
T  8346460 taaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgat 8346370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 77 - 360
Target Start/End: Complemental strand, 21846554 - 21846285
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||| |||||||||| | |||||||||||||| | |||| ||  ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  177 aatccatcgattttgattgcgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatcc 276  Q
    |||| ||||||||||||||||||            | |||||||||||||||||| |||| |||||||||||||| |||||  || ||||||||||||||    
T  21846455 aatcaatcgattttgattgcgat------------aagtcatttatgactatatatcatttataacatatatttaatattat-ttatttgggtaaaatcc 21846369  T
Q  277 atcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||| |||| ||||| |||||||| ||||| ||||||||||||| ||||||  |||| |||||||||||||||||| ||||||||    
T  21846368 atcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgatt 21846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 73 - 356
Target Start/End: Complemental strand, 8343933 - 8343644
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    |||||||||||||||||||  | | ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||     
T  8343933 aaccattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatat 8343834  T
Q  173 acaaaatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatatacca-ttcataacatatatttagtattaaatttt 263  Q
      |||||||||| ||||| ||||        |||||||||||||| || ||||| ||||| ||||||||| || ||||  ||||||||||||||   |||    
T  8343833 gaaaaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattttataagttatatttagtattattattt 8343734  T
Q  264 ttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||   |||||||||| || || |||||||||||||| ||||  |||||| |||||||||||||  ||||||||||| ||||||||||||||||    
T  8343733 tt---taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgc 8343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 24990200 - 24990012
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||| ||||||||||||| |||||  ||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| |||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  177 aatccatcgattttgattg--------cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtatta 257  Q
    |||||||||||||||||||        |||||||||||||| ||  |||||||||||||||||| ||| ||||||||||||||||||||    
T  24990100 aatccatcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatactatttataacatatatttagtatta 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 73 - 252
Target Start/End: Complemental strand, 26281442 - 26281256
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||     
T  26281442 aaccattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataa 26281343  T
Q  173 acaaaatccatcgatttt-----gatt--gcgatttcttataaattaggtcatttatgactatataccattcataacatatatttag 252  Q
     |||||||||||||||||     ||||   |||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||    
T  26281342 gcaaaatccatcgattttgttgcgatttaacgatttcttataaactaagtcatttatgactatataccatttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 24989710 - 24989553
Alignment:
Q  261 tttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  24989710 ttttttggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcctt-agtaaaatccttcgattttgattgccatt 24989612  T
Q  361 gtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
     |||  || | ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  24989611 ttacgagtcccgattttgttattccctttcgacctaaagtaaagtcccgattttgacaa 24989553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 8571250 - 8571375
Alignment:
Q  84 tcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccat 183  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  184 cgattttgattgcgatttcttataaa 209  Q
    ||||||||||||||||||||||||||    
T  8571350 cgattttgattgcgatttcttataaa 8571375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 76 - 360
Target Start/End: Complemental strand, 7730472 - 7730197
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||| ||| ||||||| |||||||| |||||||||  |    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  176 aaatccatcgattttgattgcgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt-tgggtaaaat 274  Q
    |||||||||||||||||||| ||||  |||  | |    || | ||  |||| ||  |||| |||||||||||||||||||   ||||| | ||||||||    
T  7730373 aaatccatcgattttgattgagatt--ttacgatt----tcttata-aactaaat--catttataacatatatttagtattttttttttgttggtaaaat 7730283  T
Q  275 ccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||| |||| |||||||||||||||||||| |||||| ||| |||||||||  |||||||||| | |||||||||| ||||||||    
T  7730282 ccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttggttgcgatt 7730197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 39182259 - 39182383
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    |||||||||||||||| |||||||||    
T  39182358 aaatccatcgattttggttgcgattt 39182383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 22687793 - 22687669
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||||| ||| |||||||| | ||||||||||||||| |||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  177 aatccatcgattttgattgcgattt 201  Q
    |||||||||||||||||||||||||    
T  22687693 aatccatcgattttgattgcgattt 22687669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 77 - 201
Target Start/End: Original strand, 11326386 - 11326510
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||  ||||||| |||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  177 aatccatcgattttgattgcgattt 201  Q
    |||| ||||||||||||||||||||    
T  11326486 aatctatcgattttgattgcgattt 11326510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 70 - 360
Target Start/End: Complemental strand, 26617612 - 26617315
Alignment:
Q  70 tacaaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatcc--atagtagaatcccaa 167  Q
    ||||||||||||| | ||||| | ||||| ||||||||||| |||||||||| |||||| ||||||||||||||| ||||| |  |||||||||| | ||    
T  26617612 tacaaccattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaa 26617513  T
Q  168 a--atagacaaaatccatcgattttgattgcgatt--------tcttataaattaggtcatttatgactatataccattcataacatatatttagtatta 257  Q
    |  |||| ||||||| |||||||||||||||||||        |||| || | || |||||||||||||||    |||| |||||||||||||||||||     
T  26617512 aatataggcaaaatctatcgattttgattgcgattttacgagatcttgtagactaagtcatttatgactat----catttataacatatatttagtatt- 26617418  T
Q  258 aattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcg 357  Q
    | ||||||  |||||||| |||||||| |||||||||||||||||||  ||||||  |||||||||| |  ||||| ||||||||| || |||  |||||    
T  26617417 atttttttttgtaaaatcaatcgattttgattgcgattttacaattttttatatcctttctacaaaaataattgagcaaaatcctttgaatttagttgcg 26617318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 9685374 - 9685249
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||| |||||| |||||||||||||||| ||||||||| ||||||  |||||||||||    
T  9685374 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 9685275  T
Q  176 aaatccatcgattttgattgcgattt 201  Q
    ||||||||||||||| ||||||||||    
T  9685274 aaatccatcgattttaattgcgattt 9685249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 86 - 360
Target Start/End: Original strand, 11324988 - 11325269
Alignment:
Q  86 aaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 185  Q
    ||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||| ||||||||| |||||| | ||||||| |||||| |||      
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcat-a 11325086  T
Q  186 attttgattg--------cgatttcttataaattaggtcatttatgactatatacc----attcataacatatatttagtattaaattttttgggtaaaa 273  Q
    ||||||||||        |||||||||||||| || ||||||||||||||||||||    ||| |||||  ||||||||| ||   |||||| |||||||    
T  11325087 attttgattgcgaatttacgatttcttataaactaagtcatttatgactatataccaattatttataac--atatttagt-ttttttttttttggtaaaa 11325183  T
Q  274 tccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||| |||||  |||||||||||| ||||||| ||| |||| ||||  |||||||||| ||||  | |||| ||||||||    
T  11325184 tccatcgattttgattgtaattttacaattt-ctatatcaattttacagaagtagttgagtaaaacccttgaaatttggttgcgatt 11325269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 39182357 - 39182447
Alignment:
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 39182447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 270 - 419
Target Start/End: Original strand, 11326484 - 11326633
Alignment:
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgtt 369  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||| |||||||||| |||| ||   ||     
T  11326484 aaaatctatcgattttgattgcgattttacaatttcctatattgattccacaaaagtccttgagtaaaatacttcaattttgattgtgattttaagagtc 11326583  T
Q  370 ctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |  |||||||||||| ||||| ||||| | |||||| | |||||||||||    
T  11326584 ccaattttgctattctctttccacctgaaataaagttctgattttgacaa 11326633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 230 - 350
Target Start/End: Complemental strand, 27509379 - 27509260
Alignment:
Q  230 taccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttct 329  Q
    ||||||| ||||||||||||||||||||  |||||||| ||||||| ||||| ||  ||||||||||||||||||| ||||||||||||| ||||||  |    
T  27509379 taccatttataacatatatttagtattattttttttgg-taaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagt 27509281  T
Q  330 tgagtaaaatccttcgatttt 350  Q
    ||||||||||||||| |||||    
T  27509280 tgagtaaaatccttcaatttt 27509260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 196 - 359
Target Start/End: Original strand, 6916907 - 6917068
Alignment:
Q  196 cgatttcttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttttgggtaaaatccatcgatttcgattgcgatt 295  Q
    ||||||||||||||||| ||||||||||||| ||| ||| | |||||||||||||| |||    |||| | |||||||| ||||||||| |||||| |||    
T  6916907 cgatttcttataaattaagtcatttatgact-tattccagttataacatatatttaatatatttttttgttggtaaaattcatcgattttgattgcaatt 6917005  T
Q  296 ttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    ||| |||||| |||||||||| ||  |||||  |||||||||||||||| ||||||||||||||    
T  6917006 ttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgattgcgat 6917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 25842625 - 25842513
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||  || | |||||||||| ||||||||||| || ||||||    
T  25842625 tcctacatcgattctacaaaagttcatgagtaaaatcctccaattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 25842526  T
Q  404 gtcccgattttga 416  Q
    ||||| |||||||    
T  25842525 gtcccaattttga 25842513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 8304321 - 8304436
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| |||  ||   |||||||||| || |||||||| || ||||||    
T  8304321 tcctatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaa 8304420  T
Q  404 gtcccgattttgacaa 419  Q
    ||| ||||||||||||    
T  8304421 gtctcgattttgacaa 8304436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 214 - 360
Target Start/End: Complemental strand, 26565532 - 26565386
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    |||||||||||||||||||  || |||||||||||| |  ||||  ||| ||| ||||||||||||| |||| |||||| ||||||| ||||  |||||     
T  26565532 gtcatttatgactatatacagtttataacatatattaac-attatttttgttttggtaaaatccatcaattttgattgcaattttacgattttttatatt 26565434  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||    
T  26565433 gattctacaaaagtagttgagtaaaatccttcgattttgattacgatt 26565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 9685211 - 9685085
Alignment:
Q  281 atttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgct 380  Q
    |||| ||||| ||||||| ||||| ||| |||||||||| |||||| || |||||||||||||||||||| ||||||||| |||  ||  ||||||||||    
T  9685211 attttgattgtgattttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgct 9685112  T
Q  381 attccctttcgacctggagtaaagtcc 407  Q
    ||||| |||||||| | ||||||||||    
T  9685111 attccttttcgaccagaagtaaagtcc 9685085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 30294175 - 30294275
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 176  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||   ||||| |||||||||| | |||| |||||||| |||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcacctt---cgactcaaatccatagcaaaatctcaaaataggcaa 30294271  T
Q  177 aatc 180  Q
    ||||    
T  30294272 aatc 30294275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 228 - 396
Target Start/End: Original strand, 30294404 - 30294572
Alignment:
Q  228 tataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagt 326  Q
    ||||| ||| ||||||||||||||  ||||  ||| ||| ||||||||||||||| || ||||| |||||||  ||||| | ||||||||||| ||||||    
T  30294404 tatacaatttataacatatatttaacattatctttgttttggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagt 30294503  T
Q  327 tcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctg 396  Q
      || |||||||||||||||||||||||| |||| |||   || |||||||||| |||||| ||||||||    
T  30294504 agttaagtaaaatccttcgattttgattgtgatt-tacgatttttgattttgctcttccctctcgacctg 30294572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 8329909 - 8329821
Alignment:
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||| | ||||| |||||||||||||| ||||| |||||| |||||||||||||  |||||||||||||||| |||||||||||    
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgc 8329821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 8572329 - 8572428
Alignment:
Q  260 ttttttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    ||||||||||||||||||| ||||| |||||| |||||| |||||| |||||| |||||||||| || ||||| ||| ||| ||||||||||||||||||    
T  8572329 ttttttgggtaaaatccattgattttgattgcaattttataatttc-tatatcaattctacaaatgtccttgattaacatctttcgattttgattgcgat 8572427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 1981217 - 1981107
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||||||||||||||| ||||  |||||||||  |||||||||||||||| ||||| |||  ||||  ||||| ||| ||||||||||| || ||||||    
T  1981217 tcctatatcgattctactaaagaccttgagtaa--tccttcgattttgattacgattttacgagttccaatttttctaatccctttcgacttgaagtaaa 1981120  T
Q  404 gtcccgattttga 416  Q
    |||||||||||||    
T  1981119 gtcccgattttga 1981107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 4574965 - 4575080
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    |||||||||||||||||||||||  ||||||| ||| ||| |||||||||||||||| |||   || ||||||| |||||||||||| ||||| || |||    
T  4574965 tcctatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacctgaagaaaa 4575064  T
Q  404 gtcccgattttgacaa 419  Q
     || | ||||||||||    
T  4575065 atctcaattttgacaa 4575080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 1977758 - 1977839
Alignment:
Q  278 tcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||| |||||||||||||  ||||| ||||||||||||| |||| |  ||||||||||||||||||||||||||||||||    
T  1977758 tcgattttgattgcgattttaggatttcttatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgatt 1977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 1977707 - 1977776
Alignment:
Q  132 caccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattt 201  Q
    |||||||||||||| |||||||||||||||||| ||||||  |||||| | |||||||||||||||||||    
T  1977707 caccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattt 1977776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 8346396 - 8346308
Alignment:
Q  268 gtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||| | ||||| ||||||||| |||| ||||| |||||| |||||| ||||||  ||||||||||||||||||||||| ||||    
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttgtttgc 8346308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 8630088 - 8630001
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatc 163  Q
    |||||||||||||||| |||||||| ||| |||||| |||||||||  |||||  | | ||||||||||| |||||||||||||||||    
T  8630088 cattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatc 8630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 23618317 - 23618267
Alignment:
Q  310 atcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23618317 atcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgatt 23618267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 27510052 - 27509948
Alignment:
Q  97 ttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgc 196  Q
    |||||| |||||||  ||||||||| || ||||||||| | |||||| | ||||| ||||||||||   ||||||| |||||| |||| |||||||||||    
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  197 gattt 201  Q
    |||||    
T  27509952 gattt 27509948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 26565761 - 26565663
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 171  Q
    |||||||||||||||||| | | |||||||| |||||| ||| ||||||| ||||| ||||| || ||||| | |||| ||||| |||||| |||||||    
T  26565761 aaccattgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaata 26565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 26340263 - 26340212
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 359  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  26340263 tatatcgattctataaaagtt-ttgagtaaaattcttcgattttgattgcgat 26340212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 301 - 419
Target Start/End: Complemental strand, 22687164 - 22687046
Alignment:
Q  301 atttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattccctttcgacctggag 399  Q
    ||||| ||||||||||||||||||||  ||||||||||| |||| |||||| ||| |||| ||| ||  || ||||||||| ||| ||||||| ||| ||    
T  22687164 atttcttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctc-gattttgctcttctctttcgatctgaag 22687066  T
Q  400 taaagtcccgattttgacaa 419  Q
     ||| |||||||||| ||||    
T  22687065 caaaatcccgattttaacaa 22687046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 4574475 - 4574537
Alignment:
Q  81 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacga 143  Q
    |||| ||||||  ||||||||||||||||||||| |||||| ||||||  |||||||||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacga 4574537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 419
Target Start/End: Complemental strand, 10285759 - 10285682
Alignment:
Q  342 ttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    ||||||||||||||||||| |||   |  ||||||| || ||| ||||||||||| |||||| |||||||||||||||    
T  10285759 ttcgattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaatcccgattttgacaa 10285682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 17809493 - 17809440
Alignment:
Q  86 aaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttca 139  Q
    |||||| |||||||||||| ||||| |||||||||||||||||  |||||||||    
T  17809493 aaaatcgcgacttaaatcccaaaattcaggattttgtgactttactcaccttca 17809440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 21157587 - 21157495
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    |||||||| ||||||||||||||  |||| ||||||||||| |||||||||| |||| |||       |||||||||||||||||| || ||| ||||||    
T  21157587 tcctatatagattctacaaaagtagttgaataaaatccttcaattttgattgagattttac-------gattttgctattcccttttgatctgaagtaaa 21157495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 26281251 - 26281169
Alignment:
Q  335 aaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||| ||||||||||||||| |||   | |||| ||||||||||| |||||||||  |||||||||| |||||||||||    
T  26281251 aaaatccttcaattttgattgcgattttac-gatcctga-tttgctattccttttcgacctaaagtaaagtcctgattttgacaa 26281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 25842728 - 25842643
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttac 299  Q
    ||||||||||||||||| | ||| ||||||||||||||  ||||  ||| ||| |||| ||||| ||||||| ||||||||||||||    
T  25842728 gtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgattgcgattttac 25842643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 144; Significance: 3e-75; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 73 - 385
Target Start/End: Complemental strand, 7588 - 7268
Alignment:
Q  73 aaccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 172  Q
    |||||||||||| | ||||||||||||||| ||||||| |||||||||| ||||||||| |||||||||||   |||||||||||||||||| |||||||    
T  7588 aaccattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaatag 7489  T
Q  173 acaaaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgactatataccattcataacatatatttagtattaaattttt 264  Q
     |||||| |||||||||| ||||||||||        ||||||||  | || |||||||| ||||||||| | | ||||||||||||||||||   ||||    
T  7488 gcaaaattcatcgattttaattgcgattttacgatttcttataaacgaagtaatttatgaatatataccaattagaacatatatttagtattattgtttt 7389  T
Q  265 tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac 364  Q
    | |||||||| ||||||||| |||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||| |||    
T  7388 ttggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttac 7289  T
Q  365 atgttctgattttgctattcc 385  Q
    | ||   ||||||||||||||    
T  7288 aagtctcgattttgctattcc 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 139; Significance: 3e-72; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 76 - 365
Target Start/End: Complemental strand, 93834 - 93538
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||| ||||| ||| |||||||||| ||||| | ||||||| |     
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  176 aaatccatcgattttgattgcgattt--------cttataaattaggtcatttatgacta-tataccattcataacatatatttagtattaaattttttg 266  Q
    ||||||||||||||||||||||||||        ||| ||||||| ||| |||||||||| ||||| ||||||||||||||||||||| ||  | ||||     
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacgattcataacatatatttagtaatatttgttttt 93637  T
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtaca 365  Q
    |||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||||  |||| ||||||||||||||||||||| ||||| ||||    
T  93636 ggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttaca 93538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 121; Significance: 2e-61; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 240 - 419
Target Start/End: Complemental strand, 56384 - 56204
Alignment:
Q  240 aacatatatttagtattaaattttt-tgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaa 338  Q
    |||||||||||||||||   ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  56384 aacatatatttagtattttttttttgttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaa 56285  T
Q  339 tccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttgacaa 419  Q
    |||||||||||||||||||||| || ||||   ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  56284 tccttcgattttgattgcgattttagatgtctcgattttgctattccctttcgacctgaagtaaagtctcgattttgacaa 56204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 214 - 360
Target Start/End: Complemental strand, 8944 - 8797
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatc 312  Q
    ||||||||||||||||||| | | ||||||||||||||| ||||  ||| ||| |||||||||||||||||| |||||||||||||||| ||| ||||||    
T  8944 gtcatttatgactatatacaacttataacatatatttagcattatctttgttttggtaaaatccatcgattttgattgcgattttacaagttcttatatc 8845  T
Q  313 gattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
     |||||||||||||  |||||||||||||||||||||||||| |||||    
T  8844 tattctacaaaagtagttgagtaaaatccttcgattttgattacgatt 8797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 9150 - 9049
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||||| || ||||||  ||||||  |||||||||||| ||| |||||||||||||||| |||||||||| | |||||  |||||| ||    
T  9150 cattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaataggca 9051  T
Q  176 aa 177  Q
    ||    
T  9050 aa 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 231 - 105
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac- 174  Q
    ||||||||  || |||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| |||||||||||| ||| | ||||||| |     
T  231 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 132  T
Q  175 aaaatccatcgattttgattgcgattt 201  Q
    ||||||||||||||||||||| |||||    
T  131 aaaatccatcgattttgattgagattt 105  T

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Target: scaffold0510; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 131 - 42
Alignment:
Q  270 aaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||| || |||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctac-aaagtagttgagtaaaatccttcgattttggtttcgatt 42  T

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Target: scaffold0079 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 14820 - 14708
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||| |||  || | |||||||||| ||| ||||||| || ||||||    
T  14820 tcctacatcgattctacaaaagtctttgaataaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaa 14721  T
Q  404 gtcccgattttga 416  Q
    | |||||||||||    
T  14720 gccccgattttga 14708  T

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Target: scaffold0017 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 38420 - 38306
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| ||||||||||||||||| | |||||||||||||||||| | |||||| ||| |||  || | |||||||||||| ||||||||| || ||||||    
T  38420 tcctacatcgattctacaaaagtccatgagtaaaatccttcgatct-gattgcaattttacgagtcccgattttgctatttcctttcgacttgaagtaaa 38322  T
Q  404 gtcccgattttgacaa 419  Q
    ||||||||||||||||    
T  38321 gtcccgattttgacaa 38306  T

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Target: scaffold0048 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 48918 - 48825
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 169  Q
    ||||||||| ||||| |||||||||||||||||||| || ||||||  ||||| |||||||||||||||| |||||||||  ||||||||||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

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Target: scaffold0048; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 48597 - 48500
Alignment:
Q  263 tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||| |||| ||||||||||| ||| |||||||||| | ||| | ||||||||||||||||||  || |||||||||||||||||||||||| ||||    
T  48597 tttggataaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgattgagatt 48500  T

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Target: scaffold0048; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 269 - 360
Target Start/End: Complemental strand, 61243 - 61152
Alignment:
Q  269 taaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    |||| ||||||||||| | || ||||||||| ||||| ||||||||||||||||||||  || |||||||| ||||||||||||||| ||||    
T  61243 taaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgatt 61152  T

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Target: scaffold0534 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 887 - 1015
Alignment:
Q  286 gattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtac-atgttctgattttgctattc 384  Q
    |||||||||||||||||||| ||||||  ||||||||||||  ||||||||||| |||||||||||||||| ||| ||| || |||  |||||||| |||    
T  887 gattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttc-aattttgctcttc 985  T
Q  385 cctttcgacctggagtaaagtcccgatttt 414  Q
    ||||| |||||| || ||| ||| ||||||    
T  986 ccttttgacctgaagcaaaatcctgatttt 1015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 133009 - 132953
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  133009 tcctacatcgattctacaaaagtccttgaggaaaatccttcgattttgattgcgatt 132953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 76202 - 76088
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| |||||||||||||||||  ||||||||||||||||||| || ||||| ||| |||  || | |  ||||||||| |||||||||  | ||||||    
T  76202 tcctacatcgattctacaaaagtctttgagtaaaatccttcgatctt-attgcaattttacgagtcccgggtttgctatttcctttcgactggaagtaaa 76104  T
Q  404 gtcccgattttgacaa 419  Q
    ||||||||||||||||    
T  76103 gtcccgattttgacaa 76088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 81 - 175
Alignment:
Q  322 aaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaagtcccgattttga 416  Q
    ||||| ||||||||||||||||||||||| ||| | ||| |||  || | |||||||||| ||||||| ||| || |||||||||||||||||||    
T  81 aaagtccttgagtaaaatccttcgattttaattacaattttacgagtcccgattttgctactcccttttgacttgaagtaaagtcccgattttga 175  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  76 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 175  Q
    ||||||||||||||| |||||||||||  |||||| ||| ||||||  | ||| |||||||||||| ||| |||||||||| ||||||  |||||||  |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  176 aaatcc 181  Q
    ||||||    
T  37196 aaatcc 37191  T

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Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 33131 - 33234
Alignment:
Q  267 ggtaaaatccatcgatttcgattgcgattttacaatt-----tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattg 361  Q
    |||| |||| |||||||| ||||||||||||| | ||     || ||||||||||||||||||||   |||||||||| ||||||||||||||||||||     
T  33131 ggtagaatcaatcgattttgattgcgattttagatttcgctatcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattt 33230  T
Q  362 taca 365  Q
    ||||    
T  33231 taca 33234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  77 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaat 162  Q
    ||||||||||||||| |||||||||| ||||||| ||  ||||||  ||||| |||||||| ||||||| |||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 145826 - 145875
Alignment:
Q  307 tatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgc 356  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||    
T  145826 tatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgc 145875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 416
Target Start/End: Original strand, 8289 - 8503
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaa----------- 301  Q
    ||||||||||||||||| | ||| ||| |||||||||||||||| |||| ||| |||| ||||| ||||||| |||||||||||||| |               
T  8289 gtcatttatgactatatgcaatttata-catatatttagtattatatttgttttggtagaatcc-tcgattttgattgcgattttacgagtcccgacttt 8386  T
Q  302 --tttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggag 399  Q
      | ||||||||| |||||||| || | ||||||||||||||||||||||||| ||| ||| ||   || |  ||||| ||| ||||||||||| |  ||    
T  8387 gctatcctatatcaattctacacaactccttgagtaaaatccttcgattttgactgcaattttatgagtcccaattttactactccctttcgacttaaag 8486  T
Q  400 taaagtcccgattttga 416  Q
    |||| ||||||||||||    
T  8487 taaactcccgattttga 8503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 142864 - 142920
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
    ||||||||| ||||||||||| | ||||||||||||||||| ||||| |||||||||    
T  142864 tcctatatctattctacaaaactccttgagtaaaatccttcaattttaattgcgatt 142920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 5208 - 5099
Alignment:
Q  215 tcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcg 313  Q
    ||||||||||||| || | ||| ||||||||||||||| ||||  |||  || |||| ||||| ||||||| ||||||||||||||  | ||||||||||    
T  5208 tcatttatgactacatgcaatttataacatatatttagcattatttttcatttggtagaatcc-tcgattttgattgcgattttac--tatcctatatcg 5112  T
Q  314 attctacaaaagt 326  Q
    ||| |||||||||    
T  5111 attttacaaaagt 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 24621 - 24722
Alignment:
Q  304 tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctggagtaaa 403  Q
    ||||| |||||||||||||||    |||||||||||| || |||||||||| | ||| |||  || | |||||||||| ||||||||||| || ||||||    
T  24621 tcctacatcgattctacaaaaaaatttgagtaaaatcttttgattttgattacaattttacgagtcccgattttgctactccctttcgacttgaagtaaa 24720  T
Q  404 gt 405  Q
    ||    
T  24721 gt 24722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 467 - 624
Alignment:
Q  214 gtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatt--------- 303  Q
    ||||||||||||||||| | ||| ||| ||||||||||| ||||  ||| ||| |||| ||||| ||||||| |||||||||||||| |||             
T  467 gtcatttatgactatatgcaatttatatcatatatttagcattatttttgttttggtagaatcc-tcgattttgattgcgattttacgattcgcgatcgc 565  T
Q  304 --tcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 360  Q
      ||||||||| ||||||||||||| || |||||| |||  |||||||| |||||||||    
T  566 tatcctatatcaattctacaaaagtcctcgagtaacatcactcgattttaattgcgatt 624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 2910 - 3019
Alignment:
Q  215 tcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatttcgattgcgattttacaatttcctatatcg 313  Q
    ||||||||||||| || | | | ||||||||||||||| ||||  |||  || |||| ||||| ||||||| ||||||||||||||  | ||||||||||    
T  2910 tcatttatgactacatgcaaattataacatatatttagcattatttttcatttggtagaatcc-tcgattttgattgcgattttac--tatcctatatcg 3006  T
Q  314 attctacaaaagt 326  Q
    ||| |||||||||    
T  3007 attttacaaaagt 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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