View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7136_low_21 (Length: 204)
Name: NF7136_low_21
Description: NF7136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7136_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 1676480 - 1676661
Alignment:
| Q |
6 |
gcccgcgcgtgaccgaaccttctagaactatctcagatcgaacttcattcaacgcgctttcactttcatttcaactcattttccttccatcaatcacaac |
105 |
Q |
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| T |
1676480 |
gcccgcgcgtgaccgaaccttctagaactatctcagatcgaacttcattcaacgcgctttcactttcatttcaactcattttccttccatcaatcacaac |
1676579 |
T |
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| Q |
106 |
cgcgaaacgcaaagtaatggcggaagagaaaacggttactaccgccggtggcgagaagaaatcgacggcgagtgacactgtt |
187 |
Q |
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| T |
1676580 |
cgcgaaacgcaaagtaatggcggaagagaaaacggttactaccgccggtggcgagaagaaatcgacggcgagtgacactgtt |
1676661 |
T |
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