View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7136_low_5 (Length: 497)
Name: NF7136_low_5
Description: NF7136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7136_low_5 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 467; Significance: 0; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 1 - 475
Target Start/End: Original strand, 39475599 - 39476073
Alignment:
| Q |
1 |
agaaaatgatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475599 |
agaaaatgatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttc |
39475698 |
T |
 |
| Q |
101 |
tcttccatgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgctgcct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39475699 |
tcttccatgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgccgcct |
39475798 |
T |
 |
| Q |
201 |
tcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475799 |
tcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggttt |
39475898 |
T |
 |
| Q |
301 |
gaatctttacctttacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgtt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475899 |
gaatctttacctttacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgtt |
39475998 |
T |
 |
| Q |
401 |
ccttcaaaatcattgcccagttttgtgctacacaaggaatgggaatcgtttttcatgagacttgcaagaggcctc |
475 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39475999 |
ccttcaaaatcattgcccagttttgtgctacacaaggaatgggagtcgtttttcatgagacttgcaagaggcctc |
39476073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 53 - 475
Target Start/End: Original strand, 39483405 - 39483824
Alignment:
| Q |
53 |
atcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttccatgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctg |
152 |
Q |
| |
|
||||||||||||||| || ||||||||||||| ||||| || || || |||| | |||||||| |||||||||||||||||| ||| |||||||| |
|
|
| T |
39483405 |
atcaaccttccagaatgttatcttcccccaaacttcgatctagttt---ctgccatcaacgctctccttgaagctcagaaaccaaacataatacaagctg |
39483501 |
T |
 |
| Q |
153 |
tctccaacctcactactagagaaggacaacatggacacctcgctgccttcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
39483502 |
tctccaacctcactactagagaaggacaacatggacacctctccgccttcgttgttgacatgttctgcaccaccatgattgatgttgccaatgagttcaa |
39483601 |
T |
 |
| Q |
253 |
tgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttgaatctttacctttacactcttcgtgaacgagacaatgtcgattcgactcag |
352 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
39483602 |
tgtccctacgctcgttttctacactttcagtgttgcttcccttggtttgaatctttatcttcacactcttcgtgaacgagacaatatcgatttgactcag |
39483701 |
T |
 |
| Q |
353 |
ctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgttccttcaaaatcattgcccagttttgtgctacacaaggaatgggaatcgtttt |
452 |
Q |
| |
|
||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||| ||||||| || ||||||| | |||| ||| |||| | |||| |
|
|
| T |
39483702 |
ctgctgcaagagaaagaggcagccatcccgagttttgccaaccccattccttcaaatccattgcctagctttgtgcgaaacaaagaacgggagccatttt |
39483801 |
T |
 |
| Q |
453 |
tcatgagacttgcaagaggcctc |
475 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
39483802 |
tcatgagccttgcaagaggcctc |
39483824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 459
Target Start/End: Original strand, 39451093 - 39451551
Alignment:
| Q |
1 |
agaaaatgatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
39451093 |
agaaaatgatgtcaacactaaatcccttcctatctcagattctctcaacatcatcaaccttccagaagtttctcttcctccaaacaccaatccaggtttc |
39451192 |
T |
 |
| Q |
101 |
tcttccatgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgctgcct |
200 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||| || |||||||| || || |||||||||||| ||| |||| || ||||| |||||| || |
|
|
| T |
39451193 |
gcttccatgcctgctctcctcgaagctcagaaaccaaatgtcaaacaagccgtttctaacctcactactggaggaggagaaaatggagtcctcgccacca |
39451292 |
T |
 |
| Q |
201 |
tcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggttt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||| || || || |||| |||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
39451293 |
tcgttgttgacatgttctgcaccaccatgattgatattgccaaagaattttcagttcctatgctcgtcttcttcacttctggcgttgcttcccttggttt |
39451392 |
T |
 |
| Q |
301 |
gaatctttacctttacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgtt |
400 |
Q |
| |
|
||||||| | || | || || |||||||||||||| || ||||| |||||| ||| || |||||| ||| |||||||||||| |||||| || || |
|
|
| T |
39451393 |
gaatcttcatattcataccctccgtgaacgagacaacgttgattcaactcagttgcagcagcagaaagagttagccatcccgactttcgctcacttgttt |
39451492 |
T |
 |
| Q |
401 |
ccttcaaaatcattgcccagttttgtgctacacaaggaatgggaatcgtttttcatgag |
459 |
Q |
| |
|
||||||| |||||||| ||| || ||| ||||||||||||| ||||||||||||| |
|
|
| T |
39451493 |
ccttcaagctcattgcctggttccgtcctaagcaaggaatgggaaccgtttttcatgag |
39451551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 8 - 458
Target Start/End: Original strand, 39486565 - 39487015
Alignment:
| Q |
8 |
gatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttcca |
107 |
Q |
| |
|
|||||| |||| ||||||||||| || || || |||||| | ||||||||||||||||| ||||||||||||||||||||| ||| |||| | || |
|
|
| T |
39486565 |
gatgtctacacaaaatcccttcccatttccgattctctccaggtcatcaaccttccagaatgttctcttcccccaaacaccgaaccacgttt---tgtca |
39486661 |
T |
 |
| Q |
108 |
tgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggaca---acatggacacctcgctgccttcgt |
204 |
Q |
| |
|
||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||| || |||||||| |
|
|
| T |
39486662 |
tgaacgctctccttgaagctcagaaaccaaacgtcaaacaagctgtatccaacctcactactagagaaggacaaccacctggacaccttgccgccttcgt |
39486761 |
T |
 |
| Q |
205 |
tgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttgaat |
304 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||| || || ||||| ||||| | ||||||||||| |||||||||| |||||||||| |
|
|
| T |
39486762 |
tgttgacatgttctgcaccaccatgattgatattgccaaagaattttccatccctgcgctcatcttcttcacttccggtgttgcttttcttggtttgatg |
39486861 |
T |
 |
| Q |
305 |
ctttacctttacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgttcctt |
404 |
Q |
| |
|
|| | ||| ||||||| |||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||| ||||| |||||| | |||| |
|
|
| T |
39486862 |
ctccatcttcacactctgtttgaacgagacaacatcgattcaactcagttgctgcagcagaacgaggtagccatcccaagttttgccaactcgattccaa |
39486961 |
T |
 |
| Q |
405 |
caaaatcattgcccagttttgtgctacacaaggaatgggaatcgtttttcatga |
458 |
Q |
| |
|
|| || ||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
39486962 |
ttaactcgttgcccagtttcctgctacacaaggaatatgaatcgtttttcatga |
39487015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 345
Target Start/End: Original strand, 39472136 - 39472467
Alignment:
| Q |
8 |
gatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttcca |
107 |
Q |
| |
|
|||||| |||||||||||||||||||||| || || ||| |||||||||||||||||||| ||||||| |||||||||| |||| |||| |||| | |
|
|
| T |
39472136 |
gatgtctacactaaatcccttcctatctccgattcactccacatcatcaaccttccagaatgttctcttgccccaaacacagatcaaggtccctct---a |
39472232 |
T |
 |
| Q |
108 |
tgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgctgccttcgttgt |
207 |
Q |
| |
|
|||| || |||||||||||||||||||||||||| ||||||| || || ||||||| ||| ||| || || ||||| ||| || || || ||||| |
|
|
| T |
39472233 |
tgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagtagtatctaacctcattaccagatcag---aaaatggagtccttgccgcttttgttgt |
39472329 |
T |
 |
| Q |
208 |
tgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttgaatctt |
307 |
Q |
| |
|
||||||||||||||| | |||||| |||||||||| |||||| |||||||||||| || ||||||||||| |||||||| | |||||| |||| | || |
|
|
| T |
39472330 |
tgacatgttctgcacaaacatgattgatgttgccaaagagttctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagtttt |
39472429 |
T |
 |
| Q |
308 |
tacctttacactcttcgtgaacgagacaatgtcgattc |
345 |
Q |
| |
|
| ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
39472430 |
catctttacactcttcgtcaacgagacaatgtctattc |
39472467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 458
Target Start/End: Original strand, 39460350 - 39460797
Alignment:
| Q |
8 |
gatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttcca |
107 |
Q |
| |
|
||||| ||||||||||| ||||| | || || |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| | || | |
|
|
| T |
39460350 |
gatgttaacactaaatcacttcccacttctgattctctcgacatcatcaaccttccagaagtttctcttcccccaaacatcgaaccaact---tccagaa |
39460446 |
T |
 |
| Q |
108 |
tgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgctgccttcgttgt |
207 |
Q |
| |
|
||| ||| ||||||||||||||||| ||||||| |||||||| || || || |||||||||| || | |||||||| |||| | ||||| ||||| |
|
|
| T |
39460447 |
tgatggctttcctcgaagctcagaaatcaaacgtcaaacaagccgtatctaatctcactactactagagaaaaacatggaaccctcacagcctttgttgt |
39460546 |
T |
 |
| Q |
208 |
tgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttgaatctt |
307 |
Q |
| |
|
||||||||||||||| | ||||| || ||||||| || || ||||||||||| || ||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
39460547 |
tgacatgttctgcactaaaatgattgatattgccaaagaattttcagtccctacgcttgtcttcttcacttccggtgttgcttcccttggttcaaatctt |
39460646 |
T |
 |
| Q |
308 |
tacctttacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgttccttcaa |
407 |
Q |
| |
|
| | |||||||||||||| ||||||| || ||||| | |||| ||| || ||||| || | ||||| || | |||||||||| | |||||| | |
|
|
| T |
39460647 |
catatccacactcttcgtgaaagagacaacgtagattcaaatcagttgcagcagcagactgaattggccataccaactttcgccaactcggttcctatat |
39460746 |
T |
 |
| Q |
408 |
aatcattgcccagttttgtgctacacaaggaatgggaatcgtttttcatga |
458 |
Q |
| |
|
| || ||||||||| ||||| |||||||||||||||| ||||| |||| |
|
|
| T |
39460747 |
actcgctgcccagttccatgctaaacaaggaatgggaatccttttttatga |
39460797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 115 - 459
Target Start/End: Complemental strand, 39458259 - 39457917
Alignment:
| Q |
115 |
tctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgctgccttcgttgttgacatg |
214 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||| |||||||||||||||| || | | || ||||| ||| ||||| ||| ||||||||||| |
|
|
| T |
39458259 |
tctcctcaaagctcagaaaccaaacgtcaaaaaagccgtctccaacctcactaa---agcaccagaaaatggagtcctagctgcattcattgttgacatg |
39458163 |
T |
 |
| Q |
215 |
ttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttg-aatctttacctt |
313 |
Q |
| |
|
||||||||||||||||| |||||| || || || ||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||| | || |
|
|
| T |
39458162 |
ttctgcaccaccatgattgatgttgtaaaagaattttctgtccctacgctcgtcttcttcacttccggtgttgctttccttggtttgaaatcttcatatt |
39458063 |
T |
 |
| Q |
314 |
tacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaaccccgttccttcaaaatcat |
413 |
Q |
| |
|
| | | | |||||||||||| || ||||| |||||| |||||| ||||| ||| | ||||||| ||||||| ||| | ||||||||||| | | |
|
|
| T |
39458062 |
cataatatgtttgaacgagacaacgttgattccactcagttgctgcagcagactgagttggccatccgaggtttcgctaactcagttccttcaaacactt |
39457963 |
T |
 |
| Q |
414 |
tgcccagttttgtgctacacaaggaatgggaatcgtttttcatgag |
459 |
Q |
| |
|
||||||||| ||||||| |||||||||||| || || |||||||| |
|
|
| T |
39457962 |
tgcccagttcagtgctacgcaaggaatgggagtccttcttcatgag |
39457917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 39470827 - 39470597
Alignment:
| Q |
7 |
tgatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttcc |
106 |
Q |
| |
|
||||||| || |||||||| |||| ||||| || |||||| | ||||||||||||||||||||||| ||| ||||| | | |||||||||| | |
|
|
| T |
39470827 |
tgatgtctacgctaaatccattcccatctctgattctctccatgtcatcaaccttccagaagtttctgttctcccaacctctgatccaggttcggat--- |
39470731 |
T |
 |
| Q |
107 |
atgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctcactactagagaaggacaacatggacacctcgctgccttcgttg |
206 |
Q |
| |
|
|||| ||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||| |||| ||||||||||| |||||| || || ||| |
|
|
| T |
39470730 |
atgaacgctctcctcgaagctcataaagcaaacgtcaaacaagctatctccaacctcactactggaga---acaacatggacccctcgccgctgtcattg |
39470634 |
T |
 |
| Q |
207 |
ttgacatgttctgcaccaccatgatcaatgttgccaa |
243 |
Q |
| |
|
|||||||||||||||| | |||||| |||||||||| |
|
|
| T |
39470633 |
ttgacatgttctgcacaaacatgattgatgttgccaa |
39470597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 302
Target Start/End: Original strand, 39454780 - 39455027
Alignment:
| Q |
49 |
catcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttccatgacagctctcctcgaagctcagaaaccaaacgtaaaacaa |
148 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||| || ||| |||| | |||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
39454780 |
catcatcaaccttccagaatgctctcttcccccaaacactaatccagtttcctc---catgtccgctcaccttgaagctcagaaaccaaacgtcaaacaa |
39454876 |
T |
 |
| Q |
149 |
gctgtctccaacctcactactagagaaggacaacatggacacctcgctgccttcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagt |
248 |
Q |
| |
|
|| || || ||||||| |||| | |||| ||| |||| |||||| || |||||||||||||||| |||||| ||||||| |||||||||| |||| |
|
|
| T |
39454877 |
gccgtatctaacctcattactggtgaag--caa-gtggagtcctcgcagctttcgttgttgacatgtcctgcacagccatgattgatgttgccaaagagt |
39454973 |
T |
 |
| Q |
249 |
tcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttga |
302 |
Q |
| |
|
|| ||||||| ||||| ||||||||||| |||| |||| ||||||||||| |
|
|
| T |
39454974 |
tctccatccctacactcgtcttcttcacttccagtgtagctttccttggtttga |
39455027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 459
Target Start/End: Complemental strand, 39464440 - 39464179
Alignment:
| Q |
198 |
ccttcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttgg |
297 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||||| || || |||||| || | || ||||||||||| ||||||||| |||||| |
|
|
| T |
39464440 |
ccttcgttgttgacatgttctgcaccaacatgattgatgttgccaaggaattttccgtccctgcgtttgtgttcttcacttcgagtgttgctttccttgg |
39464341 |
T |
 |
| Q |
298 |
tttgaatctttacctttacactcttcgtgaacgagacaatgtcgattcgactcagctgctgctgcagaacgaggtagccatcccgagtttcgccaacccc |
397 |
Q |
| |
|
|||||||||| | || ||||| | |||||||||||| |||||||| ||||||||| || | || || | || ||||||||||||| ||| || |
|
|
| T |
39464340 |
tttgaatcttcatattcacactttgtttgaacgagacaacgtcgattcaactcagctggagcaactgactgaattgtccctcccgagtttcgctaactcc |
39464241 |
T |
 |
| Q |
398 |
gttccttcaaaatcattgcccagttttgtgctacacaaggaatgggaatcgtttttcatgag |
459 |
Q |
| |
|
|||||| ||||||| ||||||||| || ||| |||||||| || |||||||||||||| |
|
|
| T |
39464240 |
gttcctacaaaatcgttgcccagtgcagtaatacgcaaggaatccgagtcgtttttcatgag |
39464179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 43312426 - 43312315
Alignment:
| Q |
191 |
ctcgctgccttcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgagttcaatgtccctacgctcgttttcttcacttctggtgttgctt |
290 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| || ||||| || ||||||| | ||||| | ||||||||| |||||||||| |
|
|
| T |
43312426 |
ctcgctgccttcgttgttgacatgttctgcaccaccatgattgatgtagctaatgactttggtgtcccttccctcgtctacttcacttccggtgttgctt |
43312327 |
T |
 |
| Q |
291 |
cccttggtttga |
302 |
Q |
| |
|
||||||||||| |
|
|
| T |
43312326 |
tccttggtttga |
43312315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 39464603 - 39464451
Alignment:
| Q |
8 |
gatgtcaacactaaatcccttcctatctcagaatctctcaacatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttcca |
107 |
Q |
| |
|
|||||| ||||||||||| |||| || || || ||||| || |||||||||||||||||||||||||||||| || | | |||||||||| | || | |
|
|
| T |
39464603 |
gatgtctacactaaatccattcccatatctgattctcttaatgtcatcaaccttccagaagtttctcttccccaaacctctgatccaggttccgct---a |
39464507 |
T |
 |
| Q |
108 |
tgacagctctcctcgaagctcagaaaccaaacgtaaaacaagctgtctccaacctc |
163 |
Q |
| |
|
||| |||||||| || ||||| ||||||||||| |||||||| ||||| |||||| |
|
|
| T |
39464506 |
tgaacgctctccttgatgctcacaaaccaaacgtcaaacaagccgtctctaacctc |
39464451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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