View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7139_low_30 (Length: 279)

Name: NF7139_low_30
Description: NF7139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7139_low_30
NF7139_low_30
[»] chr8 (39 HSPs)
chr8 (19-263)||(29382400-29382644)
chr8 (196-261)||(5850934-5850999)
chr8 (196-261)||(14528142-14528207)
chr8 (196-263)||(24114321-24114388)
chr8 (196-261)||(17976612-17976677)
chr8 (208-261)||(30783782-30783835)
chr8 (195-247)||(30235369-30235421)
chr8 (199-259)||(31288354-31288413)
chr8 (196-259)||(19786724-19786787)
chr8 (196-259)||(30806540-30806603)
chr8 (205-259)||(17101936-17101990)
chr8 (197-263)||(24269592-24269657)
chr8 (200-262)||(24904630-24904692)
chr8 (199-257)||(26008019-26008077)
chr8 (197-259)||(34497109-34497171)
chr8 (196-261)||(13315033-13315097)
chr8 (196-261)||(24110696-24110761)
chr8 (197-261)||(5052962-5053026)
chr8 (198-261)||(15238794-15238857)
chr8 (202-261)||(24723482-24723540)
chr8 (196-259)||(28276801-28276863)
chr8 (199-261)||(14075590-14075652)
chr8 (208-261)||(2637603-2637656)
chr8 (196-257)||(6884951-6885011)
chr8 (196-261)||(30122196-30122260)
chr8 (198-258)||(14628371-14628431)
chr8 (204-256)||(25226137-25226189)
chr8 (209-261)||(44011065-44011116)
chr8 (198-237)||(13697857-13697896)
chr8 (202-261)||(17509246-17509304)
chr8 (199-261)||(24119810-24119871)
chr8 (196-261)||(25182469-25182534)
chr8 (205-257)||(18448587-18448639)
chr8 (197-261)||(24644832-24644895)
chr8 (202-257)||(17969413-17969468)
chr8 (204-259)||(26615285-26615339)
chr8 (199-261)||(14006091-14006153)
chr8 (221-263)||(21314641-21314683)
chr8 (213-257)||(27659455-27659499)
[»] scaffold0005 (1 HSPs)
scaffold0005 (197-263)||(168337-168403)
[»] chr4 (55 HSPs)
chr4 (197-263)||(14648889-14648955)
chr4 (196-261)||(17671995-17672060)
chr4 (197-261)||(13692710-13692774)
chr4 (196-259)||(17951339-17951402)
chr4 (196-259)||(17955191-17955254)
chr4 (203-261)||(13908854-13908912)
chr4 (196-261)||(19562219-19562284)
chr4 (196-263)||(11490525-11490592)
chr4 (196-250)||(9737561-9737615)
chr4 (196-261)||(12578307-12578372)
chr4 (198-259)||(13128917-13128978)
chr4 (204-261)||(19492741-19492798)
chr4 (203-259)||(17709757-17709813)
chr4 (198-257)||(5679200-5679259)
chr4 (200-259)||(22176005-22176064)
chr4 (195-261)||(11700610-11700676)
chr4 (195-257)||(15047120-15047182)
chr4 (195-257)||(15107242-15107304)
chr4 (196-242)||(20829798-20829844)
chr4 (196-261)||(13992917-13992982)
chr4 (196-257)||(19882633-19882694)
chr4 (200-261)||(19929716-19929777)
chr4 (196-261)||(21323916-21323981)
chr4 (196-261)||(25121267-25121331)
chr4 (205-261)||(7582299-7582355)
chr4 (196-251)||(12318426-12318481)
chr4 (202-261)||(17216816-17216875)
chr4 (196-258)||(9052667-9052728)
chr4 (203-261)||(20315000-20315058)
chr4 (197-250)||(22357587-22357640)
chr4 (208-261)||(22526369-22526422)
chr4 (205-261)||(11521232-11521288)
chr4 (197-253)||(19092289-19092345)
chr4 (196-244)||(40227770-40227817)
chr4 (204-263)||(15164768-15164827)
chr4 (195-261)||(12839821-12839887)
chr4 (199-261)||(19900576-19900637)
chr4 (221-261)||(24639495-24639535)
chr4 (203-242)||(13587231-13587270)
chr4 (205-260)||(19374855-19374909)
chr4 (204-259)||(26115947-26116001)
chr4 (199-245)||(1833650-1833696)
chr4 (198-244)||(11933414-11933460)
chr4 (196-261)||(3774818-3774882)
chr4 (205-262)||(11093966-11094023)
chr4 (199-235)||(10107007-10107043)
chr4 (209-261)||(43941828-43941880)
chr4 (226-257)||(12761272-12761303)
chr4 (199-238)||(15050146-15050185)
chr4 (199-238)||(15104239-15104278)
chr4 (200-263)||(25643460-25643522)
chr4 (189-259)||(17337178-17337247)
chr4 (202-259)||(16730442-16730499)
chr4 (205-257)||(19636631-19636682)
chr4 (199-259)||(22218644-22218703)
[»] chr6 (48 HSPs)
chr6 (196-261)||(9726015-9726080)
chr6 (196-261)||(21907425-21907490)
chr6 (196-261)||(12183372-12183437)
chr6 (196-261)||(17729145-17729210)
chr6 (196-261)||(21672476-21672541)
chr6 (196-261)||(8241270-8241335)
chr6 (196-261)||(21679892-21679957)
chr6 (196-261)||(25927344-25927409)
chr6 (196-263)||(23143715-23143782)
chr6 (196-257)||(7543005-7543066)
chr6 (204-261)||(9516786-9516843)
chr6 (196-261)||(11176943-11177008)
chr6 (198-255)||(14079491-14079548)
chr6 (196-261)||(27737730-27737795)
chr6 (199-254)||(21932100-21932155)
chr6 (208-259)||(23645810-23645861)
chr6 (198-252)||(5624635-5624689)
chr6 (199-261)||(28589471-28589533)
chr6 (196-257)||(15466363-15466423)
chr6 (204-257)||(20005924-20005977)
chr6 (196-261)||(22567833-22567898)
chr6 (196-260)||(18075430-18075494)
chr6 (196-256)||(20145106-20145166)
chr6 (196-256)||(22187673-22187733)
chr6 (190-261)||(4339722-4339793)
chr6 (198-251)||(2586716-2586769)
chr6 (196-261)||(28933701-28933766)
chr6 (196-256)||(8039178-8039237)
chr6 (208-256)||(17299877-17299925)
chr6 (197-253)||(19244579-19244635)
chr6 (205-257)||(23844510-23844562)
chr6 (205-257)||(27124537-27124589)
chr6 (196-259)||(21688838-21688901)
chr6 (208-261)||(22566203-22566256)
chr6 (200-244)||(20002440-20002484)
chr6 (219-263)||(22410366-22410410)
chr6 (202-261)||(17827133-17827192)
chr6 (199-261)||(20722218-20722278)
chr6 (210-261)||(34478532-34478582)
chr6 (199-257)||(28586075-28586133)
chr6 (202-263)||(17382144-17382205)
chr6 (198-263)||(24251511-24251576)
chr6 (205-241)||(34092327-34092363)
chr6 (199-237)||(9899024-9899062)
chr6 (196-234)||(17883852-17883890)
chr6 (218-259)||(23232026-23232067)
chr6 (204-256)||(25781796-25781848)
chr6 (205-245)||(26587622-26587662)
[»] chr3 (50 HSPs)
chr3 (196-261)||(21301911-21301976)
chr3 (197-261)||(10917912-10917976)
chr3 (196-261)||(12805931-12805996)
chr3 (197-261)||(21325334-21325398)
chr3 (190-261)||(18458465-18458536)
chr3 (199-261)||(12759383-12759445)
chr3 (196-261)||(6289896-6289961)
chr3 (198-259)||(10744897-10744958)
chr3 (196-261)||(16245770-16245835)
chr3 (204-261)||(22349410-22349467)
chr3 (197-261)||(821555-821619)
chr3 (197-261)||(2167658-2167721)
chr3 (203-261)||(19908307-19908365)
chr3 (198-263)||(3116458-3116522)
chr3 (202-263)||(4650231-4650291)
chr3 (196-261)||(12411144-12411209)
chr3 (196-257)||(41508360-41508421)
chr3 (197-261)||(21825910-21825973)
chr3 (202-261)||(8770019-8770077)
chr3 (206-260)||(10923150-10923204)
chr3 (198-264)||(18736710-18736775)
chr3 (196-257)||(20429703-20429764)
chr3 (196-261)||(21303395-21303460)
chr3 (198-262)||(11518001-11518065)
chr3 (195-259)||(13908269-13908332)
chr3 (202-261)||(8765117-8765175)
chr3 (196-263)||(31286054-31286120)
chr3 (198-244)||(5508331-5508377)
chr3 (197-263)||(8319034-8319099)
chr3 (199-261)||(21083307-21083368)
chr3 (199-261)||(28728940-28729002)
chr3 (204-260)||(11533017-11533073)
chr3 (205-261)||(27542956-27543011)
chr3 (197-260)||(8143609-8143671)
chr3 (196-243)||(19171893-19171940)
chr3 (196-230)||(22245343-22245377)
chr3 (196-261)||(7147981-7148045)
chr3 (220-261)||(8557170-8557211)
chr3 (203-252)||(51119293-51119341)
chr3 (202-262)||(932742-932801)
chr3 (205-261)||(17438472-17438527)
chr3 (199-238)||(12752203-12752242)
chr3 (186-240)||(7478392-7478446)
chr3 (225-263)||(8889191-8889229)
chr3 (203-261)||(19706837-19706894)
chr3 (199-261)||(20339805-20339866)
chr3 (199-261)||(21019637-21019698)
chr3 (199-261)||(25756671-25756733)
chr3 (203-260)||(21074580-21074636)
chr3 (203-259)||(23056214-23056269)
[»] chr7 (85 HSPs)
chr7 (195-263)||(10587063-10587131)
chr7 (196-261)||(7318266-7318331)
chr7 (188-261)||(10584527-10584600)
chr7 (195-258)||(15869587-15869650)
chr7 (198-261)||(23099993-23100056)
chr7 (199-261)||(10937598-10937660)
chr7 (196-261)||(9864367-9864432)
chr7 (202-261)||(8054099-8054158)
chr7 (196-262)||(5530014-5530080)
chr7 (196-261)||(2563811-2563875)
chr7 (196-261)||(5797504-5797569)
chr7 (202-263)||(8054528-8054589)
chr7 (197-262)||(9574401-9574466)
chr7 (196-261)||(31492923-31492988)
chr7 (197-261)||(3734590-3734654)
chr7 (195-263)||(11221203-11221271)
chr7 (196-261)||(2350788-2350853)
chr7 (196-261)||(3329699-3329764)
chr7 (188-261)||(5108551-5108623)
chr7 (196-261)||(9731668-9731733)
chr7 (196-261)||(16365698-16365763)
chr7 (196-261)||(18662434-18662499)
chr7 (197-261)||(6013587-6013651)
chr7 (205-261)||(8979047-8979103)
chr7 (205-261)||(13759901-13759957)
chr7 (197-261)||(14196014-14196077)
chr7 (196-263)||(1584538-1584603)
chr7 (195-261)||(7397188-7397253)
chr7 (199-261)||(9916562-9916624)
chr7 (199-261)||(9924474-9924536)
chr7 (199-257)||(15303666-15303723)
chr7 (203-261)||(18661590-18661648)
chr7 (199-261)||(26134789-26134850)
chr7 (196-261)||(4986548-4986613)
chr7 (196-261)||(4990646-4990711)
chr7 (196-261)||(12329675-12329740)
chr7 (196-261)||(14755171-14755236)
chr7 (196-261)||(17153195-17153260)
chr7 (202-259)||(18369023-18369080)
chr7 (197-242)||(19153292-19153337)
chr7 (197-242)||(20752691-20752736)
chr7 (195-256)||(21230304-21230365)
chr7 (199-263)||(4785833-4785896)
chr7 (199-263)||(4818833-4818896)
chr7 (197-261)||(16297861-16297925)
chr7 (199-259)||(18449238-18449298)
chr7 (202-260)||(1848269-1848325)
chr7 (200-259)||(4579095-4579153)
chr7 (198-261)||(9500439-9500502)
chr7 (198-261)||(12181603-12181666)
chr7 (196-259)||(18495366-18495429)
chr7 (202-263)||(20582258-20582316)
chr7 (195-261)||(1872777-1872843)
chr7 (196-262)||(6042454-6042519)
chr7 (209-263)||(8313434-8313488)
chr7 (195-261)||(9245173-9245239)
chr7 (199-257)||(23093306-23093363)
chr7 (196-257)||(1587674-1587735)
chr7 (188-241)||(1814100-1814153)
chr7 (202-263)||(11803080-11803140)
chr7 (196-257)||(16306687-16306748)
chr7 (208-257)||(21227184-21227233)
chr7 (199-255)||(5047434-5047489)
chr7 (195-259)||(9261196-9261260)
chr7 (199-263)||(12391181-12391245)
chr7 (203-242)||(9720964-9721003)
chr7 (225-263)||(4449002-4449040)
chr7 (203-261)||(9866582-9866639)
chr7 (203-257)||(9890183-9890237)
chr7 (202-259)||(13418533-13418590)
chr7 (199-253)||(33035469-33035522)
chr7 (196-257)||(21912525-21912586)
chr7 (196-256)||(9130899-9130958)
chr7 (196-252)||(10648571-10648627)
chr7 (199-259)||(18466001-18466061)
chr7 (196-259)||(17077121-17077184)
chr7 (226-261)||(18467474-18467509)
chr7 (223-261)||(8877441-8877479)
chr7 (196-254)||(17151799-17151856)
chr7 (195-257)||(17160033-17160095)
chr7 (214-256)||(39273221-39273263)
chr7 (198-258)||(22339355-22339418)
chr7 (195-259)||(1882361-1882425)
chr7 (199-259)||(4258929-4258988)
chr7 (221-261)||(21102334-21102374)
[»] chr2 (37 HSPs)
chr2 (196-261)||(25888261-25888326)
chr2 (196-261)||(29719272-29719337)
chr2 (202-261)||(17743517-17743576)
chr2 (202-261)||(27909160-27909219)
chr2 (197-256)||(45553124-45553183)
chr2 (196-261)||(15339231-15339296)
chr2 (196-261)||(32085456-32085521)
chr2 (197-261)||(20174676-20174740)
chr2 (199-261)||(8447091-8447152)
chr2 (199-261)||(8503111-8503173)
chr2 (202-263)||(25196010-25196070)
chr2 (196-256)||(26603396-26603456)
chr2 (198-262)||(31804940-31805004)
chr2 (197-264)||(28770481-28770548)
chr2 (188-261)||(11382794-11382867)
chr2 (196-261)||(25618550-25618614)
chr2 (196-257)||(45621926-45621987)
chr2 (197-261)||(12953335-12953399)
chr2 (197-261)||(17349352-17349414)
chr2 (204-263)||(30411679-30411738)
chr2 (199-261)||(12557750-12557811)
chr2 (199-261)||(19200176-19200237)
chr2 (203-260)||(32440039-32440095)
chr2 (202-263)||(25530445-25530507)
chr2 (198-261)||(25885501-25885563)
chr2 (225-263)||(25535296-25535334)
chr2 (200-261)||(23011804-23011864)
chr2 (206-259)||(25939161-25939213)
chr2 (202-262)||(17635815-17635875)
chr2 (196-252)||(20173348-20173403)
chr2 (196-260)||(30900886-30900950)
chr2 (198-261)||(13776334-13776396)
chr2 (196-235)||(27418350-27418389)
chr2 (202-245)||(28925521-28925563)
chr2 (197-253)||(5777211-5777266)
chr2 (197-257)||(5792823-5792882)
chr2 (202-262)||(17675670-17675730)
[»] chr1 (50 HSPs)
chr1 (196-261)||(21449082-21449147)
chr1 (196-263)||(24306344-24306411)
chr1 (202-261)||(25405671-25405730)
chr1 (202-260)||(15544008-15544066)
chr1 (195-261)||(23038053-23038118)
chr1 (188-261)||(13345377-13345450)
chr1 (196-259)||(9787922-9787985)
chr1 (196-259)||(17359155-17359218)
chr1 (198-260)||(22664201-22664263)
chr1 (199-261)||(26540892-26540953)
chr1 (196-261)||(3591694-3591759)
chr1 (204-261)||(17610297-17610354)
chr1 (196-261)||(17837510-17837575)
chr1 (202-263)||(18736279-18736340)
chr1 (196-261)||(27117759-27117824)
chr1 (202-261)||(18825655-18825713)
chr1 (198-261)||(24281272-24281335)
chr1 (198-253)||(32383047-32383102)
chr1 (195-261)||(12012841-12012907)
chr1 (202-259)||(29242518-29242575)
chr1 (197-261)||(16359865-16359928)
chr1 (202-258)||(21988026-21988082)
chr1 (202-261)||(12208600-12208659)
chr1 (198-261)||(21847629-21847691)
chr1 (202-263)||(14779564-14779625)
chr1 (196-261)||(15813196-15813260)
chr1 (206-259)||(16179010-16179063)
chr1 (196-261)||(16787767-16787832)
chr1 (198-259)||(51473919-51473978)
chr1 (196-261)||(33190670-33190735)
chr1 (186-261)||(15813565-15813641)
chr1 (202-258)||(21334763-21334819)
chr1 (217-261)||(21666649-21666693)
chr1 (195-259)||(22620254-22620318)
chr1 (197-261)||(26649012-26649075)
chr1 (196-259)||(24267825-24267888)
chr1 (198-245)||(34480964-34481011)
chr1 (202-263)||(16069590-16069650)
chr1 (196-261)||(44795362-44795426)
chr1 (197-261)||(147625-147689)
chr1 (195-261)||(9401501-9401563)
chr1 (217-261)||(24214558-24214602)
chr1 (194-243)||(31236107-31236158)
chr1 (204-235)||(10064637-10064668)
chr1 (199-242)||(33712660-33712702)
chr1 (197-259)||(17121523-17121584)
chr1 (204-258)||(22622892-22622945)
chr1 (198-256)||(28008100-28008158)
chr1 (202-263)||(18830481-18830541)
chr1 (225-261)||(727489-727525)
[»] scaffold0008 (3 HSPs)
scaffold0008 (196-263)||(54853-54920)
scaffold0008 (202-257)||(48235-48290)
scaffold0008 (224-262)||(234362-234400)
[»] chr5 (42 HSPs)
chr5 (197-263)||(25550543-25550609)
chr5 (196-261)||(15469929-15469994)
chr5 (198-261)||(24266996-24267058)
chr5 (198-261)||(24343627-24343689)
chr5 (196-261)||(18208290-18208354)
chr5 (202-261)||(19004267-19004326)
chr5 (195-261)||(24852213-24852279)
chr5 (202-263)||(15375921-15375982)
chr5 (195-260)||(15690770-15690834)
chr5 (196-261)||(17171594-17171659)
chr5 (196-261)||(19086220-19086285)
chr5 (199-256)||(23380303-23380360)
chr5 (196-256)||(18937741-18937800)
chr5 (202-261)||(20315471-20315529)
chr5 (196-259)||(22755514-22755577)
chr5 (196-263)||(26121363-26121429)
chr5 (204-262)||(17431884-17431942)
chr5 (202-260)||(24140442-24140499)
chr5 (196-261)||(19283896-19283961)
chr5 (198-263)||(25402376-25402441)
chr5 (202-263)||(34128636-34128696)
chr5 (199-263)||(17185459-17185523)
chr5 (198-242)||(20419951-20419995)
chr5 (196-258)||(19051542-19051604)
chr5 (199-256)||(15544047-15544103)
chr5 (220-261)||(17315141-17315182)
chr5 (204-261)||(23388879-23388935)
chr5 (204-261)||(24245585-24245642)
chr5 (196-240)||(24662212-24662256)
chr5 (203-263)||(28253281-28253340)
chr5 (202-241)||(20744872-20744911)
chr5 (196-263)||(26110501-26110567)
chr5 (204-259)||(36175135-36175189)
chr5 (203-236)||(17769461-17769494)
chr5 (204-261)||(39434464-39434520)
chr5 (196-252)||(24167634-24167690)
chr5 (199-251)||(32417407-32417458)
chr5 (205-261)||(34487640-34487695)
chr5 (213-256)||(20534099-20534141)
chr5 (199-261)||(26307600-26307660)
chr5 (198-256)||(9521009-9521066)
chr5 (197-261)||(26313713-26313777)
[»] scaffold0622 (1 HSPs)
scaffold0622 (197-257)||(722-782)
[»] scaffold0650 (1 HSPs)
scaffold0650 (198-261)||(6282-6345)
[»] scaffold0035 (1 HSPs)
scaffold0035 (201-261)||(69911-69971)
[»] scaffold0672 (1 HSPs)
scaffold0672 (196-263)||(1727-1794)
[»] scaffold0838 (1 HSPs)
scaffold0838 (204-261)||(2371-2428)
[»] scaffold0832 (1 HSPs)
scaffold0832 (204-261)||(2402-2459)
[»] scaffold0136 (1 HSPs)
scaffold0136 (196-261)||(15506-15571)
[»] scaffold0048 (1 HSPs)
scaffold0048 (198-259)||(78589-78650)
[»] scaffold0024 (1 HSPs)
scaffold0024 (196-261)||(39577-39642)
[»] scaffold0016 (2 HSPs)
scaffold0016 (199-256)||(12105-12162)
scaffold0016 (204-261)||(3533-3589)
[»] scaffold0957 (1 HSPs)
scaffold0957 (196-261)||(3146-3210)
[»] scaffold0001 (2 HSPs)
scaffold0001 (196-261)||(69075-69139)
scaffold0001 (195-245)||(81479-81529)
[»] scaffold0155 (1 HSPs)
scaffold0155 (198-261)||(36036-36099)
[»] scaffold0653 (1 HSPs)
scaffold0653 (195-261)||(4524-4590)
[»] scaffold0638 (1 HSPs)
scaffold0638 (205-259)||(866-919)
[»] scaffold0063 (1 HSPs)
scaffold0063 (196-242)||(51116-51162)
[»] scaffold0042 (1 HSPs)
scaffold0042 (205-259)||(29909-29962)
[»] scaffold0238 (1 HSPs)
scaffold0238 (196-261)||(19104-19168)
[»] scaffold1869 (1 HSPs)
scaffold1869 (203-263)||(428-488)
[»] scaffold0056 (1 HSPs)
scaffold0056 (203-263)||(21277-21336)
[»] scaffold0054 (1 HSPs)
scaffold0054 (196-256)||(72065-72125)
[»] scaffold0043 (1 HSPs)
scaffold0043 (198-257)||(89899-89957)
[»] scaffold0006 (2 HSPs)
scaffold0006 (195-254)||(18793-18852)
scaffold0006 (197-254)||(223078-223135)
[»] scaffold0090 (1 HSPs)
scaffold0090 (198-256)||(7458-7516)
[»] scaffold0019 (2 HSPs)
scaffold0019 (204-261)||(181747-181803)
scaffold0019 (199-257)||(11236-11294)
[»] scaffold0620 (1 HSPs)
scaffold0620 (205-241)||(7661-7697)
[»] scaffold0102 (1 HSPs)
scaffold0102 (197-261)||(35531-35595)
[»] scaffold0062 (1 HSPs)
scaffold0062 (225-261)||(43268-43304)
[»] scaffold0394 (1 HSPs)
scaffold0394 (199-238)||(13971-14010)
[»] scaffold0128 (1 HSPs)
scaffold0128 (196-241)||(37419-37464)
[»] scaffold0427 (1 HSPs)
scaffold0427 (196-224)||(2885-2913)


Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 263
Target Start/End: Complemental strand, 29382644 - 29382400
Alignment:
Q  19 agtgtcgtcatcaagaatatatgcaacatccattttgtgattaaattgaaacaaatagtgatcatcctccgcataaagaatcttaacacgcttttccgac 118  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29382644 agtgtcgtcatcaagaatatatacaacatccattttgtgattaaattgaaacaaatagtgatcatcctccgcataaagaatcttaacacgcttttccgac 29382545  T
Q  119 ttccaggtgctagccacacgttcactaaagtaagaaacttatttttcctatcttccaggagtcggtcaatgatgtatggattaggcaagtgtaccaaatc 218  Q
    ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29382544 ttctaggtgctagccacacgtttacgaaagtaagaaacttatttttcctatcttccaagagtcggtcaatgatgtatggattaggcaagtgtaccaaatc 29382445  T
Q  219 gtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  29382444 gtttaccaagtaataaagtgataagtagagtatcgtatccacagg 29382400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 5850934 - 5850999
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5850934 ggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 5850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 14528142 - 14528207
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14528142 ggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccaca 14528207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 24114388 - 24114321
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  24114388 ggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagg 24114321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 17976612 - 17976677
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  17976612 ggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccaca 17976677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 30783835 - 30783782
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 30235369 - 30235421
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaa 247  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30235369 tggattaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagtaaa 30235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 31288354 - 31288413
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatcca 31288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 19786724 - 19786787
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  19786724 ggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatcca 19786787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 30806603 - 30806540
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||    
T  30806603 ggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatcca 30806540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 17101990 - 17101936
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 17101936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 24269592 - 24269657
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||    
T  24269592 gattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagg 24269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 24904630 - 24904692
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacag 24904692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 26008019 - 26008077
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatc 26008077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 34497109 - 34497171
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||    
T  34497109 gattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatcca 34497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 13315097 - 13315033
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||    
T  13315097 ggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccaca 13315033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 24110761 - 24110696
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  24110761 ggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 5053026 - 5052962
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||| ||||| |||||||||    
T  5053026 gattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccaca 5052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 15238794 - 15238857
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| ||||| ||||||||||||| ||| ||||||||| | |||||||||||||    
T  15238794 attaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccaca 15238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 24723540 - 24723482
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||||| || || |||||||||||||||||||||||||||||||||||||||    
T  24723540 ggcatgtgtaccaa-tcattcaccaagtaataaagtgataagtaaagtatcgtatccaca 24723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 28276863 - 28276801
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  28276863 ggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatcca 28276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 14075590 - 14075652
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| || ||||||||||| |||||||||||| ||||||||||||| | |||||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccaca 14075652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 2637603 - 2637656
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 2637656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 6884951 - 6885011
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||||||  |||||||||||    
T  6884951 ggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatc 6885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 30122260 - 30122196
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||  || ||||||||||||||| |||||| |||||| ||||||||    
T  30122260 ggattaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccaca 30122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 14628371 - 14628431
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    ||||||||||| ||||||||| |||||||||||||||  ||||||||||| ||| ||||||    
T  14628371 attaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaaatattgtatcc 14628431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 25226137 - 25226189
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtat 25226189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 44011116 - 44011065
Alignment:
Q  209 gtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccaca 44011065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 13697857 - 13697896
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagt 237  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  13697857 attaggcaagtgtaccaaatcgtttaccaattaataaagt 13697896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 17509246 - 17509304
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  17509246 ggcacgtgtaccaa-tcgttaaccaagtaataaagtgataagtagagtatcatatccaca 17509304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 24119871 - 24119810
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||| |||||||||||||||||| |||||||| |||||| ||||| |||||||||    
T  24119871 ttagacaagtgtgccaaatcgtttaccaagttataaagtg-taagtagagtattgtatccaca 24119810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 25182534 - 25182469
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||| |||||||  |||||||| ||||||||||| ||||| |||||||||| ||||    
T  25182534 ggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcaca 25182469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 18448639 - 18448587
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||| |||||||||||||||||| |||| || || ||||||||    
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatc 18448587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 24644832 - 24644895
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| |||||||| ||||||  ||||||||||||||||||| |||||| ||||| |||||||||    
T  24644832 gattatgcaagtgtgccaaattatttaccaagtaataaagtg-taagtagagtattgtatccaca 24644895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 17969413 - 17969468
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||| || |||| |||| |||||||||||||||||| || |||||||||||    
T  17969413 ggcaagtgtgccgaatcatttatcaagtaataaagtgataaatatagtatcgtatc 17969468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 26615339 - 26615285
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  26615339 caagtgtatcaaatcgtt-accaactaataaagtgataagtagagtattgtatcca 26615285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 14006091 - 14006153
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| ||||||| || ||| |||||||||||||||| ||||||||| |||||| ||| ||||    
T  14006091 ttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagtatcatattcaca 14006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 21314641 - 21314683
Alignment:
Q  221 ttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagg 21314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 27659455 - 27659499
Alignment:
Q  213 caaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||  | |||||||||||||||||||| |||||||||||    
T  27659455 caaatcgttagcgaagtaataaagtgataagtagagtatcgtatc 27659499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 168403 - 168337
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  168403 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 168337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 14648889 - 14648955
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14648889 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 14648955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 17671995 - 17672060
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  17671995 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccaca 17672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 13692774 - 13692710
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  13692774 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccaca 13692710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 17951402 - 17951339
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17951402 ggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 17955254 - 17955191
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17955254 ggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17955191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 13908854 - 13908912
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 13908912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 19562284 - 19562219
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  19562284 ggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccaca 19562219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 11490525 - 11490592
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  11490525 ggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagg 11490592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 9737615 - 9737561
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagta 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9737615 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagta 9737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 12578372 - 12578307
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||    
T  12578372 ggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccaca 12578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 13128978 - 13128917
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatcca 13128917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 19492798 - 19492741
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccaca 19492741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 17709757 - 17709813
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcca 17709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 5679200 - 5679259
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  5679200 attagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatc 5679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 22176064 - 22176005
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatcca 22176005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 11700676 - 11700610
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  11700676 tggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca 11700610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 15047120 - 15047182
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||||||    
T  15047120 tggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatc 15047182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 15107304 - 15107242
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||||||    
T  15107304 tggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatc 15107242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 20829844 - 20829798
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20829844 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 20829798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 13992982 - 13992917
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  13992982 ggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccaca 13992917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 19882633 - 19882694
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||    
T  19882633 ggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatc 19882694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 19929777 - 19929716
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccaca 19929716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 21323981 - 21323916
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||| |||| |||||||||||||||    
T  21323981 ggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccaca 21323916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 25121331 - 25121267
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  25121331 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccaca 25121267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 7582299 - 7582355
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 7582355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 12318426 - 12318481
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtat 251  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  12318426 ggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 17216816 - 17216875
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccaca 17216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 9052667 - 9052728
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||    
T  9052667 ggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatcc 9052728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 20315000 - 20315058
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||| ||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccaca 20315058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 22357640 - 22357587
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagta 250  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  22357640 gattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagta 22357587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 22526369 - 22526422
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccaca 22526422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 11521288 - 11521232
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacaca 11521232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 19092289 - 19092345
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 253  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  19092289 gattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcg 19092345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 40227770 - 40227817
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 244  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40227770 ggattaggcaagtgtaccaaatcg-ttaccaagtaataaagtgataagt 40227817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 15164768 - 15164827
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||||||||| || | ||||| | |||||||||||||||||    
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagg 15164827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 12839887 - 12839821
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||| |||||||| |||||| ||||||| ||||||| ||||| ||| |||||||||||||||    
T  12839887 tggattaggaaagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccaca 12839821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 19900576 - 19900637
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||| ||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcaca 19900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 24639535 - 24639495
Alignment:
Q  221 ttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccaca 24639495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 13587231 - 13587270
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  13587231 gcaagtgtaccaaatcgtttaccaaataataaagtgataa 13587270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 19374909 - 19374855
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccac 19374855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 26116001 - 26115947
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtg-taattaaagtatcgtatcca 26115947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 1833696 - 1833650
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 245  Q
    ||||||||||  | |||||||||||||||||||||||||||||||||    
T  1833696 ttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagta 1833650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 11933414 - 11933460
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 244  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||    
T  11933414 attaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt 11933460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 3774818 - 3774882
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||| ||||| |||||| |||||||||||||  ||||| |||||| ||||||||    
T  3774818 ggattaggcaagtgtatcaaattgtttactaagtaataaagtg-caagtagagtatcatatccaca 3774882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 11093966 - 11094023
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    ||||||| ||||||||||||||||||||||| ||||| ||| ||| || |||||||||    
T  11093966 aagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacag 11094023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 10107007 - 10107043
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaa 235  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10107007 ttaggcaagtgtagcaaatcgtttaccaagtaataaa 10107043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 43941880 - 43941828
Alignment:
Q  209 gtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||  |||| |||||||||||||||||||||| ||||| ||||||||    
T  43941880 gtaccaaattatttatcaagtaataaagtgataagtaaggtatcctatccaca 43941828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 257
Target Start/End: Original strand, 12761272 - 12761303
Alignment:
Q  226 aagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||||||||||||||||||    
T  12761272 aagtaataaagtgataagtaaagtatcgtatc 12761303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 15050185 - 15050146
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 238  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  15050185 ttaggcaagtgtatcaaatcatttaccaagtaataaagtg 15050146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 15104239 - 15104278
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 238  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  15104239 ttaggcaagtgtatcaaatcatttaccaagtaataaagtg 15104278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 25643460 - 25643522
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||| |||||||| |||||||||  |||||||||||||| ||| || |||||||||||||||||    
T  25643460 taggtaagtgtactaaatcgtttgtcaagtaataaagtg-taactagagtatcgtatccacagg 25643522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 17337247 - 17337178
Alignment:
Q  189 gatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||| ||||||| | |||| ||||||||| || ||| |||||||| |||||||||| |||||||||||||    
T  17337247 gatgtgtggattaagtaagtctaccaaatcatt-accgagtaataacgtgataagtagagtatcgtatcca 17337178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 16730499 - 16730442
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||| |||||| |||||| |||| ||| || ||||||||||||| |||||||||||||    
T  16730499 ggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatcca 16730442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 19636682 - 19636631
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||| || ||||||||||||| |||||| ||||| |||||    
T  19636682 aagtgtaccaaatcgtt-acaaagtaataaagtggtaagtagagtattgtatc 19636631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 22218703 - 22218644
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||| || ||||| |||| ||||| |||||||||||||| |||||| |||||||||||||    
T  22218703 ttaggtaactgtacaaaattgtttatcaagtaataaagtg-taagtagagtatcgtatcca 22218644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 9726015 - 9726080
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9726015 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 9726080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 21907425 - 21907490
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21907425 ggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 21907490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 12183437 - 12183372
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12183437 ggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccaca 12183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 17729145 - 17729210
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17729145 ggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 17729210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 21672541 - 21672476
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21672541 ggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21672476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 8241270 - 8241335
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  8241270 ggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccaca 8241335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 21679957 - 21679892
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  21679957 ggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccaca 21679892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 25927409 - 25927344
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  25927409 ggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccaca 25927344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 23143715 - 23143782
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||    
T  23143715 ggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagg 23143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 7543066 - 7543005
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  7543066 ggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatc 7543005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 9516786 - 9516843
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccaca 9516843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 11176943 - 11177008
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||    
T  11176943 ggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccaca 11177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 14079548 - 14079491
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgta 255  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 27737795 - 27737730
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||    
T  27737795 ggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccaca 27737730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 21932155 - 21932100
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 254  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 23645861 - 23645810
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 23645810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 5624635 - 5624689
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 252  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5624635 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 28589533 - 28589471
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||    
T  28589533 ttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccaca 28589471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 15466363 - 15466423
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  15466363 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatc 15466423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 20005977 - 20005924
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatc 20005924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 22567833 - 22567898
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||||||    
T  22567833 ggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccaca 22567898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 18075494 - 18075430
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||    
T  18075494 ggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccac 18075430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 20145166 - 20145106
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  20145166 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 22187673 - 22187733
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  22187673 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 4339722 - 4339793
Alignment:
Q  190 atgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| |||||||| |||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||||    
T  4339722 atgtgtggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccaca 4339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 2586716 - 2586769
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtat 251  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  2586716 attaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat 2586769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 28933766 - 28933701
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| |||||||||| || ||||| ||| ||||||||||||||||| |||||||||||||||    
T  28933766 ggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccaca 28933701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 8039237 - 8039178
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  8039237 ggattaggcaagtgtgccaaatcgtttaccaagtaataaagtg-taagtggagtatcgtat 8039178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 17299925 - 17299877
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 17299877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 19244579 - 19244635
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 253  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||    
T  19244579 gattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcg 19244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 23844562 - 23844510
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatc 23844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 27124589 - 27124537
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||||    
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatc 27124537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 21688901 - 21688838
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| |||||||    
T  21688901 ggattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatcca 21688838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 22566256 - 22566203
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||  |||||||||||||||||||||||||| |||||| ||||||||    
T  22566256 tgtaccaaattatttaccaagtaataaagtgataagtagagtatcatatccaca 22566203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 244  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 22410410 - 22410366
Alignment:
Q  219 gtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagg 22410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 17827192 - 17827133
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||  |||||||||||| |||| || |||||||||||||||    
T  17827192 ggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccaca 17827133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 20722278 - 20722218
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||| |||||  ||||||||    
T  20722278 ttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccaca 20722218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 34478532 - 34478582
Alignment:
Q  210 taccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  34478532 taccaaatcgtttaccaaataataaagtg-taagtagagtatcgtatccaca 34478582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 28586133 - 28586075
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||| ||||| |||||||||||||||| ||||||||| ||||||||| |||||| ||||    
T  28586133 ttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatc 28586075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 17382144 - 17382205
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||| ||||| ||||||||||||||  ||||||||||| |||| ||||||||||| |||||    
T  17382144 ggcaaatgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagg 17382205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 24251511 - 24251576
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||| | || |||| |||||||||    
T  24251511 attaagcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagg 24251576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 34092363 - 34092327
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgata 241  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34092363 aagtgtatcaaatcgtttaccaagtaataaagtgata 34092327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 9899062 - 9899024
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt 237  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  9899062 ttagacaagtgtaccaaattgtttaccaagtaataaagt 9899024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 17883890 - 17883852
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataa 234  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  17883890 ggattagccaaatgtaccaaatcgtttaccaagtaataa 17883852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 23232067 - 23232026
Alignment:
Q  218 cgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||||||||||||||  ||||| ||||||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatcca 23232026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 25781796 - 25781848
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||||||||||  ||||||||| |||||| || | ||||||||    
T  25781796 caagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtat 25781848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 26587622 - 26587662
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 245  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  26587622 aagtgtatcaaatcgtataccacgtaataaagtgataagta 26587662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 21301911 - 21301976
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21301911 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 10917912 - 10917976
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10917912 gattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 10917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 12805996 - 12805931
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  12805996 ggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 12805931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 21325334 - 21325398
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  21325334 gattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccaca 21325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 18458536 - 18458465
Alignment:
Q  190 atgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  18458536 atgtgtggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 12759383 - 12759445
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccaca 12759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 6289896 - 6289961
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  6289896 ggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccaca 6289961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 10744897 - 10744958
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttcca 10744958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 16245835 - 16245770
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||    
T  16245835 ggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccaca 16245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 22349410 - 22349467
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 22349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 821619 - 821555
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  821619 gattaagcatgtctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 821555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 2167721 - 2167658
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  2167721 gattagacaagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccaca 2167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 19908307 - 19908365
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccaca 19908365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 3116522 - 3116458
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagg 3116458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 4650231 - 4650291
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  4650231 ggcaagtgtaccaa-tcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagg 4650291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 12411144 - 12411209
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||||    
T  12411144 ggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccaca 12411209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 41508360 - 41508421
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||    
T  41508360 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatc 41508421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 21825973 - 21825910
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  21825973 gattaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccaca 21825910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 8770019 - 8770077
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccaca 8770077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 10923150 - 10923204
Alignment:
Q  206 agtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccac 10923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 18736775 - 18736710
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaggt 264  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||    
T  18736775 attagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggt 18736710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 20429703 - 20429764
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||| |||||| |||| ||||||||||||||||| ||||||||| |||||||||||    
T  20429703 ggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatc 20429764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 21303460 - 21303395
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| ||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||| |||||    
T  21303460 ggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccaca 21303395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 11518065 - 11518001
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||| | |||| |||||||||    
T  11518065 attaagcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatccacag 11518001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 13908332 - 13908269
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||    
T  13908332 tggattaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagtagagtatcatatcca 13908269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 8765117 - 8765175
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  8765117 ggcaggtgtaccaa-tcgttaaccaattaataaagtgataagtaaagtatcgtatccaca 8765175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 31286120 - 31286054
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| || | |||||||||||||||    
T  31286120 ggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagg 31286054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 5508331 - 5508377
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 244  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  5508331 attaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt 5508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 8319034 - 8319099
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||| | ||| |||||||||||    
T  8319034 gattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtatccacagg 8319099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 21083307 - 21083368
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||| ||||||||| ||||| ||||||| ||| |||||||||||||||||||||    
T  21083307 ttaggcaagtgtaacaaatcgtt-accaaataataaaatgacaagtaaagtatcgtatccaca 21083368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 28728940 - 28729002
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||  |||||  |||| ||||||||||||||||||||| |||||||||||||||    
T  28728940 ttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccaca 28729002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 11533073 - 11533017
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||||||| | |||||||| ||||||||||||||||| |||| |||||||||    
T  11533073 caagtgtaccaaaacatttaccaaataataaagtgataagtagagtaccgtatccac 11533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 27543011 - 27542956
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccaca 27542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 8143609 - 8143671
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||| |||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||||    
T  8143609 gattaggtaagtgtaccaaatcgtttactaagcaataaagtg-taagtagagtattgtatccac 8143671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 19171940 - 19171893
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataag 243  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  19171940 ggattaggcaagtatactaaattgtttaccaagtaataaagtgataag 19171893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 22245343 - 22245377
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagta 230  Q
    |||||||||||||||||||||||||||||||||||    
T  22245343 ggattaggcaagtgtaccaaatcgtttaccaagta 22245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 7147981 - 7148045
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| ||||||||||||||||||||||| ||||   ||||||| |||||||| ||||||    
T  7147981 ggattaggcaaatgtaccaaatcgtttaccaagtactaaa-aaataagtagagtatcgtctccaca 7148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 8557211 - 8557170
Alignment:
Q  220 tttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  8557211 tttaccgagtaataaagtgataagtagagtatcgtatccaca 8557170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 51119341 - 51119293
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 252  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  51119341 gcaagtgtatcaaatcgtt-accaaataataaagtgataagtaaagtatc 51119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 932742 - 932801
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    |||||||||| ||| |||||||| |||||||||| |||||| || ||||||||||||||||    
T  932742 ggcaagtgtatcaa-tcgtttactaagtaataaattgataaatagagtatcgtatccacag 932801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 17438527 - 17438472
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| |||||| ||||||||    
T  17438527 aagtgtaccaaatcg-ttaccaagttataaaatgataagtagagtatcatatccaca 17438472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 12752203 - 12752242
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 238  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  12752203 ttagccaagtgtaccaaatcgtttaccaagtaatgaagtg 12752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 7478446 - 7478392
Alignment:
Q  186 aatgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgat 240  Q
    ||||||||  |||| ||||||||||||||||  ||||||||| ||||||||||||    
T  7478446 aatgatgtgcggatcaggcaagtgtaccaaactgtttaccaaataataaagtgat 7478392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 8889229 - 8889191
Alignment:
Q  225 caagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagg 8889191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 19706894 - 19706837
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||| ||||| ||||||||| |||||||| | ||||||||||||| ||||||||    
T  19706894 gcaagtgtatcaaattgtttaccaaataataaagag-taagtaaagtatcatatccaca 19706837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 20339866 - 20339805
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| |||| || ||||||||||||||||||||||| || |||||| |||||||||| ||||    
T  20339866 ttagggaagtatatcaaatcgtttaccaagtaataaaatg-taagtagagtatcgtattcaca 20339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 21019698 - 21019637
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||  |||||||||| | |||||||||||||||| ||||||| |||||| ||||||||    
T  21019698 ttaggcaacagtaccaaatcatctaccaagtaataaagt-ataagtagagtatcttatccaca 21019637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 25756671 - 25756733
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| ||||| |||| ||| ||||||||   |||||| |||||||||||||||    
T  25756671 ttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtatccaca 25756733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 21074636 - 21074580
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    |||| ||||||||||| | || |||||||||||||| |||||| ||||||||||||||    
T  21074636 gcaactgtaccaaatcatctatcaagtaataaagtg-taagtagagtatcgtatccac 21074580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 23056269 - 23056214
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||| |||| ||||||||||||||| ||||| |||||  |||||||||||||    
T  23056269 gcaagtgtatcaaaacgtttaccaagtaatgaagtg-taagttgagtatcgtatcca 23056214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 10587131 - 10587063
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  10587131 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagg 10587063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 7318266 - 7318331
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  7318266 ggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 7318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 10584600 - 10584527
Alignment:
Q  188 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  10584600 tgatgtttggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccaca 10584527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 15869587 - 15869650
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  15869587 tggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcc 15869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 23100056 - 23099993
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 23099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 10937598 - 10937660
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 10937660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 9864432 - 9864367
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  9864432 ggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 9864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 8054158 - 8054099
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccaca 8054099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 5530014 - 5530080
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  5530014 ggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacag 5530080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 2563811 - 2563875
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2563811 ggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 2563875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 5797504 - 5797569
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  5797504 ggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccaca 5797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 8054589 - 8054528
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacagg 8054528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 9574401 - 9574466
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  9574401 gattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacag 9574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 31492923 - 31492988
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  31492923 ggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccaca 31492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 3734590 - 3734654
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  3734590 gattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccaca 3734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 11221271 - 11221203
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||    
T  11221271 tggattaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagg 11221203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 2350853 - 2350788
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||| | |||||||||||||    
T  2350853 ggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccaca 2350788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 3329764 - 3329699
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| ||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||    
T  3329764 ggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccaca 3329699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 5108551 - 5108623
Alignment:
Q  188 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||    
T  5108551 tgatgtgtggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccaca 5108623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 9731733 - 9731668
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||    
T  9731733 ggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccaca 9731668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 16365698 - 16365763
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  16365698 ggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccaca 16365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 18662434 - 18662499
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| ||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||    
T  18662434 ggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccaca 18662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 6013587 - 6013651
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| |||| |||||| | |||||||||||| |||||||||||||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccaca 6013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 8979103 - 8979047
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 8979047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 13759957 - 13759901
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccaca 13759901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 14196077 - 14196014
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  14196077 gattaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccaca 14196014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 1584538 - 1584603
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||  |||||||||||||||||    
T  1584538 ggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagg 1584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 7397188 - 7397253
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  7397188 tggattaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccaca 7397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 9916562 - 9916624
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||| ||||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccaca 9916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 9924474 - 9924536
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||| ||||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccaca 9924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 15303723 - 15303666
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15303723 ttagacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatc 15303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 18661590 - 18661648
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccaca 18661648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 26134850 - 26134789
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  26134850 ttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccaca 26134789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 4986548 - 4986613
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||    
T  4986548 ggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccaca 4986613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 4990646 - 4990711
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||    
T  4990646 ggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccaca 4990711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 12329675 - 12329740
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||| || ||||| |||||||||    
T  12329675 ggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccaca 12329740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 14755236 - 14755171
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||||||||||||||||| |||||| |||||||| ||||| |||||| ||||||||    
T  14755236 ggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccaca 14755171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 17153260 - 17153195
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||  ||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  17153260 ggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccaca 17153195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 18369080 - 18369023
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||    
T  18369080 ggcaagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatcca 18369023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 19153292 - 19153337
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  19153292 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 19153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 20752691 - 20752736
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  20752691 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 20752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 21230304 - 21230365
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  21230304 tggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtat 21230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 4785833 - 4785896
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  4785833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagg 4785896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 4818833 - 4818896
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  4818833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagg 4818896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 16297925 - 16297861
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||| | |||||||| ||||    
T  16297925 gattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcaca 16297861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 18449238 - 18449298
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| | |||||||||||    
T  18449238 ttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatcca 18449298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 1848325 - 1848269
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    |||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||    
T  1848325 ggcaagtgtaccaaattgt--accaagtaataaagtgataagtacagtatcgtatccac 1848269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 4579095 - 4579153
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  4579095 taggcaagtgttccaaatcgtttactaagtaat-aagtgataagtagagtatcgtatcca 4579153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 9500439 - 9500502
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||| | || |||||||||||||||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccaca 9500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 12181603 - 12181666
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| ||||||||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccaca 12181666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 18495366 - 18495429
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||  |||||||    
T  18495366 ggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatcca 18495429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 20582258 - 20582316
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||| ||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagg 20582316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 1872777 - 1872843
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||  ||||||||| || |||||||| | ||||||||| |||||||||||||||    
T  1872777 tggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccaca 1872843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 6042454 - 6042519
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    ||||||| |||||||| |||||||||||||| |||||||| || |||||| ||||||||||||||||    
T  6042454 ggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacag 6042519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 8313488 - 8313434
Alignment:
Q  209 gtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||| ||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagg 8313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 9245173 - 9245239
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| |||||| ||||||||||||||||| ||| || |||| | |||||||||||||||    
T  9245173 tggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccaca 9245239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 23093306 - 23093363
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatc 23093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 1587674 - 1587735
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||| ||||    
T  1587674 ggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatc 1587735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 1814100 - 1814153
Alignment:
Q  188 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgata 241  Q
    |||||| | |||||||||||||||||||||  ||||||||||||||||||||||    
T  1814100 tgatgtgttgattaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 11803080 - 11803140
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| || || || |||||||||||||||||||| |||||||||||||||||    
T  11803080 ggcaagtgtaccaa-tctttaacaaagtaataaagtgataagtagagtatcgtatccacagg 11803140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 16306687 - 16306748
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||| ||||||||  ||||| |||| ||||||||||||||||||||| |||||||||||    
T  16306687 ggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatc 16306748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  208 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 5047489 - 5047434
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgta 255  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| | |||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaagtg-taagtagattatcgta 5047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 9261196 - 9261260
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||| | |||| ||||||||||||||||| ||| ||||||| | |||||||||||||    
T  9261196 tggattaggcaactttacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatcca 9261260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 12391181 - 12391245
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||||| ||||||    
T  12391181 ttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacagg 12391245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 9720964 - 9721003
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  9720964 gcaagtgtaccaaatcgtttaccaaataataaagtgataa 9721003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 4449002 - 4449040
Alignment:
Q  225 caagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagg 4449040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 9866639 - 9866582
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||| ||||||||| |||||||||| |||||| |||||| ||||||||    
T  9866639 gcaagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatccaca 9866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 9890183 - 9890237
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||| |||||||||||| |||||||||||  |||||| |||||||||||    
T  9890183 gcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtatc 9890237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 13418533 - 13418590
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaa-gtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||    
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatcca 13418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 33035469 - 33035522
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 253  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||    
T  33035469 ttaggcaagtgtatcaaatcgtttacc-agtaataaagtgataggtagagtatcg 33035522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 21912586 - 21912525
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||| ||||||||||| ||||| ||||| ||| ||||||||||||||||  |||||||||||    
T  21912586 ggatcaggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatc 21912525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 9130899 - 9130958
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||| ||||    
T  9130899 ggattaggcaagtgtatcaaattgtttatcaagtaataaagtg-taagtatagtattgtat 9130958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 10648571 - 10648627
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 252  Q
    |||||||| |||  || |||||||||||||||||||||||||||||| || ||||||    
T  10648571 ggattaggaaagcatatcaaatcgtttaccaagtaataaagtgataaatagagtatc 10648627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 18466001 - 18466061
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||  ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||    
T  18466001 ttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatcca 18466061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 17077121 - 17077184
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| ||| |||||||||| ||||| ||| ||||||||||||| ||| ||||| |||||||    
T  17077121 ggattagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatcca 17077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 18467474 - 18467509
Alignment:
Q  226 aagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||| |||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccaca 18467509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 8877441 - 8877479
Alignment:
Q  223 accaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccaca 8877479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 17151856 - 17151799
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 254  Q
    ||||||||||||||||||||||| | ||||||  |||||| ||||||||| ||||||||    
T  17151856 ggattaggcaagtgtaccaaatcatataccaa-aaataaattgataagtagagtatcgt 17151799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 17160033 - 17160095
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||| |||||||| |||||||||||| | | || ||||||||||||| ||||| |||||    
T  17160033 tggattagacaagtgtatcaaatcgtttactacgaaacaaagtgataagtagagtattgtatc 17160095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 39273263 - 39273221
Alignment:
Q  214 aaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||| |||||| |||||||||||||||||||| ||||||||||    
T  39273263 aaattgtttactaagtaataaagtgataagtagagtatcgtat 39273221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 22339418 - 22339355
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaata---aagtgataagtaaagtatcgtatcc 258  Q
    ||||| ||| ||||||||||| |||| |||||||||   |||||||||||||||||||| ||||    
T  22339418 attagacaaatgtaccaaatcatttatcaagtaatattaaagtgataagtaaagtatcgcatcc 22339355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 1882361 - 1882425
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||  |||||||||||| |||||||| | |||||| ||  |||| |||||||    
T  1882361 tggattaggcaagtgtgacaaatcgtttactaagtaatacaatgataactagggtattgtatcca 1882425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 4258988 - 4258929
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||| |||||||| ||||||||||||||| ||||||| || ||| || |||||||||||||    
T  4258988 ttagacaagtgtaacaaatcgtttaccaaataataaaatg-taactagagtatcgtatcca 4258929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 21102374 - 21102334
Alignment:
Q  221 ttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||| ||||| |||| ||||    
T  21102374 ttaccaagtaataaagtgataagtagagtattgtattcaca 21102334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 25888326 - 25888261
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25888326 ggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccaca 25888261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 29719337 - 29719272
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  29719337 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccaca 29719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 17743576 - 17743517
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17743576 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 17743517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 27909219 - 27909160
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 27909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 45553124 - 45553183
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  45553124 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtat 45553183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 15339231 - 15339296
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||    
T  15339231 ggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccaca 15339296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 32085456 - 32085521
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  32085456 ggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 32085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 20174740 - 20174676
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  20174740 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccaca 20174676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 8447152 - 8447091
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccaca 8447091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 8503173 - 8503111
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccaca 8503111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 25196010 - 25196070
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  25196010 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacagg 25196070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 26603456 - 26603396
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||    
T  26603456 ggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtat 26603396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 31805004 - 31804940
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacag 31804940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 28770548 - 28770481
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaggt 264  Q
    ||||| ||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  28770548 gattaagcacgtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggt 28770481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 11382867 - 11382794
Alignment:
Q  188 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||  |||||||| ||||||||||||||  ||||||||||||||||| |||||| ||||||||    
T  11382867 tgatgtgtggattaaacaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccaca 11382794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 25618550 - 25618614
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  25618550 ggattaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 25618614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 45621987 - 45621926
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  45621987 ggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatc 45621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 12953399 - 12953335
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||| || ||||||    
T  12953399 gattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccaca 12953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 17349352 - 17349414
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  17349352 gattaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 17349414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 30411679 - 30411738
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||| |||||    
T  30411679 caagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagg 30411738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 12557811 - 12557750
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| | ||||| |||||||    
T  12557811 ttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccaca 12557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 19200237 - 19200176
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||  |||||||||||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccaca 19200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 32440095 - 32440039
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  32440095 gcaagtgtaccaaattgtttaccaagaaataaagtg-taaataaagtatcgtatccac 32440039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 25530445 - 25530507
Alignment:
Q  202 ggcaagtgtaccaaatcgtttac--caagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| |||||| |  ||||||||||||||||||||| |||||||||||||||||    
T  25530445 ggcaagtgtaccaa-tcgttttcatcaagtaataaagtgataagtagagtatcgtatccacagg 25530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 25885563 - 25885501
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| | ||||||||||||||||| ||||||| |||||||||| | |||||||||||||||    
T  25885563 attaggcgattgtaccaaatcgtttacaaagtaat-aagtgataagaatagtatcgtatccaca 25885501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 25535296 - 25535334
Alignment:
Q  225 caagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagg 25535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 23011864 - 23011804
Alignment:
Q  200 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||| | ||| |||||||||    
T  23011864 taggcaagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccaca 23011804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 25939161 - 25939213
Alignment:
Q  206 agtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||    
T  25939161 agtgtaccacatcatttatcaagtaataaagtg-taagtaaagtatcgtatcca 25939213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 17635875 - 17635815
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    ||||| |||| |||||||||||||||||||||||| || ||||| || ||| |||||||||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacag 17635815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 20173403 - 20173348
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 252  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||||    
T  20173403 ggattaggaaagtgtaccaaatcg-ttaccaagttataaagtgataagcagagtatc 20173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 30900950 - 30900886
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||||   ||||||||| ||||||||| |||||||||||||| || ||||| ||||||||    
T  30900950 ggattaggcataggtaccaaattgtttaccaaataataaagtgataactagagtattgtatccac 30900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 13776334 - 13776396
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| |||||||| |||||||||||  || ||||||||||||||||  |||||||||||||||    
T  13776334 attagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccaca 13776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 27418350 - 27418389
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaa 235  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  27418350 ggattaggcaaatgtaccaaatcgtttacaaagtaataaa 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 28925521 - 28925563
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 245  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  28925521 ggcaagtgtactaaatcgtt-accaagtaataaagtgataagta 28925563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 5777211 - 5777266
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 253  Q
    ||||||||||||||| || |||||||| ||| |||||||||  ||||||||||||||    
T  5777211 gattaggcaagtgtatcatatcgtttatcaaataataaagt-ttaagtaaagtatcg 5777266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 5792823 - 5792882
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||||||||||||| ||||||||||||  ||||||||| ||| ||||||  ||||||||||    
T  5792823 gattaggcaagtgtgccaaatcgtttattaagtaataacgtg-taagtatggtatcgtatc 5792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 17675730 - 17675670
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    ||||| |||| |||||||||||||||||||||||| || ||||| || ||| |||| ||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacag 17675670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 21449082 - 21449147
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21449082 ggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 24306411 - 24306344
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24306411 ggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 24306344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 25405730 - 25405671
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 25405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 15544066 - 15544008
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccac 15544008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 23038118 - 23038053
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  23038118 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccaca 23038053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 13345450 - 13345377
Alignment:
Q  188 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  13345450 tgatgtgtggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 13345377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 9787985 - 9787922
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  9787985 ggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatcca 9787922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 17359155 - 17359218
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  17359155 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatcca 17359218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 22664201 - 22664263
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccac 22664263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 26540892 - 26540953
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  26540892 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 26540953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 3591759 - 3591694
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||||||||    
T  3591759 ggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccaca 3591694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 17610354 - 17610297
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccaca 17610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 17837510 - 17837575
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||    
T  17837510 ggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccaca 17837575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 18736340 - 18736279
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagg 18736279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 27117824 - 27117759
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  27117824 ggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcaca 27117759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 18825655 - 18825713
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccaca 18825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 24281272 - 24281335
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  24281272 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccaca 24281335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 32383102 - 32383047
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  32383102 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 12012907 - 12012841
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||| ||||| |||||||||    
T  12012907 tggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccaca 12012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 29242518 - 29242575
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 29242575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 16359865 - 16359928
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||    
T  16359865 gattaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccaca 16359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 21988082 - 21988026
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcc 21988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 12208600 - 12208659
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccaca 12208659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 21847629 - 21847691
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||    
T  21847629 attaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagagtattgtatccaca 21847691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 14779564 - 14779625
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||||| ||||||||||||||| ||||||| || |||||| ||||||||||    
T  14779564 ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagg 14779625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 15813260 - 15813196
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||  | |||||||||||||    
T  15813260 ggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccaca 15813196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 16179010 - 16179063
Alignment:
Q  206 agtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatcca 16179063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 16787832 - 16787767
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| | | ||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  16787832 ggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcaca 16787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 51473978 - 51473919
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||| || ||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatcca 51473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 33190670 - 33190735
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| || ||||||||||||||||| ||||||||||| ||||||||| |||||  ||||||||    
T  33190670 ggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccaca 33190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 15813641 - 15813565
Alignment:
Q  186 aatgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgat-aagtaaagtatcgtatccaca 261  Q
    ||||||||  ||||||| |||||||||||||||||||| |||  ||||||||||| ||||| ||||| |||||||||    
T  15813641 aatgatgtgcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccaca 15813565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 21334819 - 21334763
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||| ||||||||||||    
T  21334819 ggcaaatgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatcc 21334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 21666693 - 21666649
Alignment:
Q  217 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  21666693 tcgttaaccaagtaataaagtgataagtagagtatcgtatccaca 21666649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 22620254 - 22620318
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||| |||||  ||||  ||||||||||||||||| || |||||||||||||    
T  22620254 tggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatcca 22620318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 26649075 - 26649012
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||| || ||| |||||||||    
T  26649075 gattagacaagtgtatcaaatcgtttaccaagtaataaaatgataagtgaa-tattgtatccaca 26649012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 24267888 - 24267825
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| |||||||| |||||| |||| ||||||||||| ||||||||| |||||| ||||||    
T  24267888 ggattagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatcca 24267825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 34480964 - 34481011
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 245  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  34480964 attagacaaatgtacaaaatcgtttaccaagtaataaagtgataagta 34481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 16069650 - 16069590
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||| ||||||    
T  16069650 ggcaagtgtaccaatt-gttaaccaagtaataaagtgataagtaaaatatcatatacacagg 16069590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 44795362 - 44795426
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| |||||||||| || | ||||||||||||||||| |||||||  |||||||||||||||    
T  44795362 ggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccaca 44795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 147625 - 147689
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| |||||||| ||||||||||  ||||||||||||||||||||  |||||| ||| ||||    
T  147625 gattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcaca 147689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 9401501 - 9401563
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| ||||||||||| |||||||| |||||||||   |||||| |||||||||||||||    
T  9401501 tggattaggca-gtgtaccaaatagtttaccaggtaataaag---taagtagagtatcgtatccaca 9401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 24214558 - 24214602
Alignment:
Q  217 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||    
T  24214558 tcgtttaccaagtaataaagtgataagtacagtactgtatccaca 24214602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 31236158 - 31236107
Alignment:
Q  194 atggattaggcaa--gtgtaccaaatcgtttaccaagtaataaagtgataag 243  Q
    |||||||||||||  ||||||| |||||||||| ||||||||||||||||||    
T  31236158 atggattaggcaaaagtgtaccgaatcgtttactaagtaataaagtgataag 31236107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 10064668 - 10064637
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaa 235  Q
    ||||||||||||||||||||||||||||||||    
T  10064668 caagtgtaccaaatcgtttaccaagtaataaa 10064637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 33712660 - 33712702
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  33712660 ttaggcaagtgtaccaaatc-tttaccaaataataaagtgataa 33712702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 17121584 - 17121523
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||| |||||||| ||||| ||||| |||||||||||||| |||||| |||||| ||||||    
T  17121584 gattagacaagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatcca 17121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 22622892 - 22622945
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    |||||||||||| ||||| |||||||||||||||||| |||| |||||| |||||    
T  22622892 caagtgtaccaa-tcgttgaccaagtaataaagtgattagtagagtatcatatcc 22622945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 28008100 - 28008158
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||| ||| |||| |||||||||||| |||||||||||| ||||| | ||||||||||    
T  28008100 attagacaaatgtatcaaatcgtttactaagtaataaagttataagaatagtatcgtat 28008158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 18830481 - 18830541
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| | ||| ||||||||| |||||||||  |||| |||||||||||||||    
T  18830481 ggcaagtgtaccaa-tggttgaccaagtaacaaagtgatacttaaattatcgtatccacagg 18830541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 727489 - 727525
Alignment:
Q  225 caagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccaca 727525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 54853 - 54920
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  54853 ggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagg 54920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 48290 - 48235
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 234362 - 234400
Alignment:
Q  224 ccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacag 234400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 25550609 - 25550543
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  25550609 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagg 25550543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 15469929 - 15469994
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  15469929 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccaca 15469994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 24267058 - 24266996
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24267058 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 24266996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 24343689 - 24343627
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24343689 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 24343627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 18208354 - 18208290
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  18208354 ggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccaca 18208290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 19004326 - 19004267
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccaca 19004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 24852279 - 24852213
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| ||| |||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  24852279 tggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccaca 24852213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 15375982 - 15375921
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  15375982 ggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagg 15375921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 15690770 - 15690834
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  15690770 tggattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccac 15690834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 17171659 - 17171594
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||    
T  17171659 ggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccaca 17171594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 19086285 - 19086220
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  19086285 ggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccaca 19086220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 23380360 - 23380303
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtat 23380303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 18937741 - 18937800
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  18937741 ggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagt-aagtatcgtat 18937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 20315529 - 20315471
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  20315529 ggcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccaca 20315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 22755514 - 22755577
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||| |||||||||| |||||||||||||||||| ||| |||||||| |||||||||||||    
T  22755514 ggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatcca 22755577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 26121429 - 26121363
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||||| ||||| |||||||||||    
T  26121429 ggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagg 26121363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 17431884 - 17431942
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 262  Q
    ||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacag 17431942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 24140442 - 24140499
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 260  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  24140442 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccac 24140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 19283961 - 19283896
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||| ||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  19283961 ggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccaca 19283896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 25402441 - 25402376
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||||| |||| ||||||||  |||||||||||| ||||| |||||||||||    
T  25402441 attaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagg 25402376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 34128636 - 34128696
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacagg 34128696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 17185459 - 17185523
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| |||||    
T  17185459 ttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagg 17185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 20419951 - 20419995
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 19051542 - 19051604
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 258  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||    
T  19051542 ggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc 19051604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 15544047 - 15544103
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||    
T  15544047 ttaggcaagtgtaccaaatcgtttaccaagtaataaactg-tcagtagagtatcgtat 15544103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 17315182 - 17315141
Alignment:
Q  220 tttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  17315182 tttatcaagtaataaagtgataagtaaagtatcgtatccaca 17315141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 23388935 - 23388879
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||    
T  23388935 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccaca 23388879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 24245642 - 24245585
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||  ||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccaca 24245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 24662256 - 24662212
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgat 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  24662256 ggattaggtaagtgtaccaaatcgtttatcaagtaataaagtgat 24662212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 28253281 - 28253340
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||| ||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  28253281 gcaaatgtaccaaatcgtttaccaagtaataaagtg-taagtagaatatcgtattcacagg 28253340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 20744911 - 20744872
Alignment:
Q  202 ggcaagtgtaccaaatcgtttaccaagtaataaagtgata 241  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  20744911 ggcaagtgtaccaaatcatttaccaagtaataaagtgata 20744872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 26110567 - 26110501
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||| |||||  ||||||||||    
T  26110567 ggattaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagg 26110501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 36175135 - 36175189
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||    
T  36175135 caagtgtaccaaatcgtttaccaagtaataaagtg-tttgtagagtatcgtatcca 36175189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 17769494 - 17769461
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaag 236  Q
    ||||||||||||||||||||||||||||||||||    
T  17769494 gcaagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 39434464 - 39434520
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |  ||||||||||||    
T  39434464 caagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccaca 39434520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 24167690 - 24167634
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 252  Q
    |||||||| |||||||  ||||||||||||||||||||||||  |||||| ||||||    
T  24167690 ggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatc 24167634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 32417458 - 32417407
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtat 251  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||| |||||    
T  32417458 ttaggtaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtat 32417407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 34487640 - 34487695
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||| |||||||||||||||||||| |||||| | |||| ||||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccaca 34487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 20534141 - 20534099
Alignment:
Q  213 caaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  20534141 caaatcttttaccaagtaataaagtg-taagtaaagtatcgtat 20534099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 26307600 - 26307660
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||| |||||  ||||||||||||  ||||||  ||||||||||||||    
T  26307600 ttaggcaagtgtaccaaattgtttattaagtaataaagt--taagtatcgtatcgtatccaca 26307660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 9521009 - 9521066
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||||||||||||||||||||||  |||||||| ||| | |||||||||||| ||||    
T  9521009 attaggcaagtgtaccaaatcgtttgtcaagtaat-aaggggtaagtaaagtatggtat 9521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 26313713 - 26313777
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||| ||||||| |||||  |||||||| ||||||| | ||||||||||| || ||||||||    
T  26313713 gattaggaaagtgtatcaaattatttaccaattaataaaataataagtaaagtgtcttatccaca 26313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 722 - 782
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  722 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatc 782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 6282 - 6345
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccaca 6345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 69911 - 69971
Alignment:
Q  201 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacaca 69971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 1727 - 1794
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    |||||||| ||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  1727 ggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatccacagg 1794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 2371 - 2428
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccaca 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 2402 - 2459
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccaca 2459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 15571 - 15506
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||| ||| |||||||||||||||    
T  15571 ggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccaca 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 78589 - 78650
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||    
T  78589 attaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatcca 78650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 39577 - 39642
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||| || ||||||||||||    
T  39577 ggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccaca 39642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 12105 - 12162
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtat 12162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 3533 - 3589
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||    
T  3533 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccaca 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 3146 - 3210
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||| |||| |||||||||||||||||||| || ||| |||||||||||||||    
T  3146 ggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccaca 3210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 69075 - 69139
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||  || ||||||||||||    
T  69075 ggattaggcaagtgtaccaaatcatt-accaagtaataaagtgataagttgagaatcgtatccaca 69139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 81479 - 81529
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 245  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  81479 tggattaggcaagtttacgaaatcgtttaccaaataataaagtgataagta 81529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 36099 - 36036
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||| ||| |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccaca 36036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 4590 - 4524
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||| |||||| ||||||||||||||||| ||| || |||| | |||||||||||||||    
T  4590 tggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccaca 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 919 - 866
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagtatcgtatcca 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 51116 - 51162
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 242  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  51116 ggattaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 29909 - 29962
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 259  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatcca 29962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 19104 - 19168
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||| |||| | |||||||||| ||||||||||| |||||||| ||||    
T  19104 ggattaggcaagtgtaccaaattgttttc-aagtaataaaatgataagtaaattatcgtatgcaca 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 488 - 428
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||| || ||||||||| |||||||||||||||| ||| ||||||||||| |||||    
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagg 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 21277 - 21336
Alignment:
Q  203 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 263  Q
    ||||||||||||| ||||| || |||||||||||||||||||| |||||| ||||||||||    
T  21277 gcaagtgtaccaa-tcgttaacaaagtaataaagtgataagtagagtatcatatccacagg 21336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 72065 - 72125
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    ||||| || ||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  72065 ggatttggtaagtgtaccaaattgttaaccaagtaataaagtgataagtagagtatggtat 72125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 89957 - 89899
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||| |||||| ||||    
T  89957 attagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatc 89899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 18852 - 18793
Alignment:
Q  195 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 254  Q
    |||||||||||||||||||||||  |||| ||||||||||| | ||||||| ||||||||    
T  18852 tggattaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgt 18793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 223135 - 223078
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 254  Q
    |||||||||||||| ||||||  |||| ||||||||||| | ||||||| ||||||||    
T  223135 gattaggcaagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgt 223078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 7516 - 7458
Alignment:
Q  198 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 256  Q
    |||||| || ||||| |||||||||| ||||||||||||||||||||| ||||| ||||    
T  7516 attaggaaaatgtactaaatcgtttatcaagtaataaagtgataagtagagtattgtat 7458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 181803 - 181747
Alignment:
Q  204 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||  |||||||||||||||||||||| |  |||||||||||||||    
T  181803 caagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccaca 181747  T

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Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 11236 - 11294
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 257  Q
    |||| ||||||||| |||| ||||| ||| ||||||||||||||||| |||||| ||||    
T  11236 ttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatc 11294  T

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Target: scaffold0620 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 7697 - 7661
Alignment:
Q  205 aagtgtaccaaatcgtttaccaagtaataaagtgata 241  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7697 aagtgtatcaaatcgtttaccaagtaataaagtgata 7661  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 35531 - 35595
Alignment:
Q  197 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    ||||| |||| |||| | ||||||||| |||||||||||||||||| || ||||| |||||||||    
T  35531 gattatgcaaatgtatctaatcgtttatcaagtaataaagtgataaatagagtattgtatccaca 35595  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 43304 - 43268
Alignment:
Q  225 caagtaataaagtgataagtaaagtatcgtatccaca 261  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccaca 43268  T

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Target: scaffold0394 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 14010 - 13971
Alignment:
Q  199 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 238  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  14010 ttaggcaagtgtatcaaatcgtttaccaagtaattaagtg 13971  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 37464 - 37419
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgata 241  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||    
T  37464 ggattagacaaatgtactaaattgtttaccaagtaataaagtgata 37419  T

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Target: scaffold0427 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 2913 - 2885
Alignment:
Q  196 ggattaggcaagtgtaccaaatcgtttac 224  Q
    |||||||||||||||||||||||||||||    
T  2913 ggattaggcaagtgtaccaaatcgtttac 2885  T

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