View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7139_low_31 (Length: 278)
Name: NF7139_low_31
Description: NF7139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7139_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 6 - 262
Target Start/End: Original strand, 43344145 - 43344401
Alignment:
| Q |
6 |
tgcaactaaaaaagagttaaagtatggaaatacatttgaaacaaatttttcagtggaagatggggctgggttgacagctaatgatataaaggtgacaatg |
105 |
Q |
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| T |
43344145 |
tgcaactaaaaaagagttaaagtatggaaatacatttgaaacaaatttttcagtggaagatggggctgggttgacagctaatgatataaaggtgacaatg |
43344244 |
T |
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| Q |
106 |
tatgcaccacctttcactactcatggtttctccatgggtcagaggcttataattctcaagatcgatgagctcgttgcacaagaacctggaagttacaccg |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43344245 |
tatgcaccacctttcactactcatggtttctccatgggtcagaggcttataattctcaagatcgatgagctcgttgcacaagaacctggaagttacaccg |
43344344 |
T |
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| Q |
206 |
ttaggatggcggcgccaccatctggggccattgctcctccaggatactacttgctct |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43344345 |
ttaggatggcggcgccaccatctggggccattgctcctccaggatactacttgctct |
43344401 |
T |
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