View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7140_low_3 (Length: 277)
Name: NF7140_low_3
Description: NF7140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7140_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 32126241 - 32126384
Alignment:
| Q |
98 |
aagaagttgaggtacctacctccatttgatattctggagagtgatgttagtttgtgagtgagaagcaactttatttgcaagttcttcacaatcaagagag |
197 |
Q |
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| T |
32126241 |
aagaagttgaggtacctacctccatttgatattctggagagtgatgttagtttgtgagtgagaagcaactttatttgcaagttcttcacaatcaagagag |
32126340 |
T |
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| Q |
198 |
taaaagagattaacatgcttttttggagacttcaccattgccat |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32126341 |
taaaagagattaacatgcttttttggagacttcaccattgccat |
32126384 |
T |
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