View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7140_low_7 (Length: 223)
Name: NF7140_low_7
Description: NF7140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7140_low_7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7543435 - 7543657
Alignment:
| Q |
1 |
gcaacaggaggacaaccagcattgaatgtggttgaaagtatgtgtgtaatggggcaagtcaggattactgcttcagattttcatcatactggtgaaacca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7543435 |
gcaacaggaggacaaccagcattgaatgtggttgaaagtatgtgtgtaatggggcaagtcaggattactgcttcagattttcatcatactggtgaaacca |
7543534 |
T |
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| Q |
101 |
ttgaagtgnnnnnnncctctgaagagagtggaggatttgttttatggcaaaaggatccagatttgtggtgtttagaactcattgtgtctggttgcaaggt |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7543535 |
ttgaagtgaaaaaaacctctgaagagagtggaggatttgttttatggcaaaaggatccagatttgtggtgtttagaactcattgtgtctggttgcaaggt |
7543634 |
T |
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| Q |
201 |
tagttgtggtagcaatggtaagg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
7543635 |
tagttgtggtagcaatggtaagg |
7543657 |
T |
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