View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7144_high_5 (Length: 599)
Name: NF7144_high_5
Description: NF7144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7144_high_5 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 518; Significance: 0; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 1 - 582
Target Start/End: Complemental strand, 10599681 - 10599105
Alignment:
| Q |
1 |
caccgatttcaaataatgtcaaagaagaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599681 |
caccgatttcaaataatgtcaaagaagaagcatttgaaattgaagtagggattggacctgagaatttatttgatccgaccgtaaaatattggagattggg |
10599582 |
T |
|
| Q |
101 |
gagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaaat |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10599581 |
gagagtgtagaacatattgggtggaagagagccactaaagttattcgctgcaactgagataactt-----gatgacatattataaagacaagaaggaaat |
10599487 |
T |
|
| Q |
201 |
gtaccagacaaattgttggcatgcactgctatagcccataactgttttaggaagcacatttcctgtggaatatttcccaccaagttattataactgatcg |
300 |
Q |
| |
|
||||||||||| |||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599486 |
gtaccagacaatttgttgacatccactgctatagcccataaatgttttaggaaacacatttcctgtggaatatttcccaccaagttattataactgatcg |
10599387 |
T |
|
| Q |
301 |
ataaaatatcaagggatgaaagattacctatggatggtgggatttttccggataaattgtttctctcaatgaagaaattttgaagcttttgaagagaacc |
400 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599386 |
ataaaacagcaagggatgaaagattacctatggatggtgggatttttctggataaattgtttctctcaatgaagaaattttgaagcttttgaagagaacc |
10599287 |
T |
|
| Q |
401 |
aatttggctaggtaatttaccaatcaaattgtttccttccaagtctatggttttgagctcatagcactttgtcaagtttataggaaattccccaaccaac |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599286 |
aatttggctaggtaatttaccaatcaaattgtttccttccaagtctatggttttgagctcatagcactttgtcaagtttataggaaattccccaaccaac |
10599187 |
T |
|
| Q |
501 |
gagttgttgagtagaaggagataccctaattttgacaaacgacccaattcttgtggaatgtttccattgtagctgttgtttc |
582 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599186 |
gagttgttgagtagaaggagataccctaattttgacaaacgacccaattcttgtggaatgtttccattgtagctgttgtttc |
10599105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 1 - 582
Target Start/End: Complemental strand, 10603346 - 10602765
Alignment:
| Q |
1 |
caccgatttcaaataatgtcaaagaagaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggg |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||| ||||||||| || |||||||||||||||||||| |
|
|
| T |
10603346 |
caccaatttcaaataatgtcaaagaagaagcattcgaaattgaagtggggattggacctaagaattgatttgatccaactgtaaaatattggagattggg |
10603247 |
T |
|
| Q |
101 |
gagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
10603246 |
gagagtgtggaacatattgggtggaagagagccactaaagctattcactgcaactgagatcacttgaagagatgtcatattataaagacaagaaggaaat |
10603147 |
T |
|
| Q |
201 |
gtaccagacaaattgttggcatgcactgctatagcccataactgttttaggaagcacatttcctgtggaatatttcccaccaagttattataactgatcg |
300 |
Q |
| |
|
||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||| | |
|
|
| T |
10603146 |
gtaccagacaatttgttgacatccattgctatagcccataactgttttaggaagcacatttcttgtggaatatttcccatcaagttattataaccgattg |
10603047 |
T |
|
| Q |
301 |
ataaaatatcaagggatgaaagattacctatggatggtgggatttttccggataaattgtttctctcaatgaagaaattttgaagcttttgaagagaacc |
400 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10603046 |
ataaaatagcaagggatgaaagattacctattgatggtgggatttttccggataaattgtttctctcgatgaagaaattttgaagcttttgaagagaacc |
10602947 |
T |
|
| Q |
401 |
aatttggctaggtaatttaccaatcaaattgtttccttccaagtctatggttttgagctcatagcactttgtcaagtttataggaaattccccaaccaac |
500 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10602946 |
aatttggctaggtaatttaccaataaatttgtttccttctaagtctatggttttgagctcatagcactttgtcaagtttataggaaattccccaaccaac |
10602847 |
T |
|
| Q |
501 |
gagttgttgagtagaaggagataccctaattttgacaaacgacccaattcttgtggaatgtttccattgtagctgttgtttc |
582 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
10602846 |
gagttgttgagtagaaggagataccttaattttgacaaacgacccaattcttgtggaatgtttccattgaagctgttatttc |
10602765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 99 - 569
Target Start/End: Original strand, 10590141 - 10590611
Alignment:
| Q |
99 |
gggagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaa |
198 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| |
|
|
| T |
10590141 |
gggagagtgttgaacatattgggcggaagagagccactaaagctattcgctgcaactgagatccccgtaagagatgacatattataaagacaagaaagaa |
10590240 |
T |
|
| Q |
199 |
atgtaccagacaaattgttggcatgcactgctatagcccataactgttttaggaagcacatttcctgtggaatatttcccaccaagttattataactgat |
298 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| | |||||||||| |||||| ||||| ||||||||||||| |||||||||||||||| || |
|
|
| T |
10590241 |
atgtaccagacaatttgttggcatgcactgctataaacttcaactgttttaagaagcaaatttcacgtggaatatttcctaccaagttattataaccaat |
10590340 |
T |
|
| Q |
299 |
cgataaaatatcaagggatgaaagattacctatggatggtgggatttttccggataaattgtttctctcaatgaagaaattttgaagcttttgaagagaa |
398 |
Q |
| |
|
|| ||||||| ||| ||||||||||| | ||||||||||||||||||||| |||||||||||| | | || ||||| | ||||||||||||||||| |
|
|
| T |
10590341 |
tgaaaaaatattaagagatgaaagattccttatggatggtgggatttttccagataaattgtttgttccgatatagaaaatgtgaagcttttgaagagag |
10590440 |
T |
|
| Q |
399 |
ccaatttggctaggtaatttaccaatcaaattgtttccttccaagtctatggttttgagctcatagcactttgtcaagtttataggaaattccccaacca |
498 |
Q |
| |
|
|||| ||||||||||| ||| |||| | ||||||||||| ||||||| | ||||||||||| |||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
10590441 |
ccaaattggctaggtatttttccaaaaagtttgtttccttctaagtctacgcttttgagctcagagcagtttgtcaagtttaaaggaaattctccaacca |
10590540 |
T |
|
| Q |
499 |
acgagttgttgagtagaaggagataccctaattttgacaaacgacccaattcttgtggaatgtttccattg |
569 |
Q |
| |
|
||||||||| |||||| | ||| | |||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10590541 |
gagagttgttggatagaagaaaatatcttaatcttgacaaacgacccaactcttgtggaatgtttccattg |
10590611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 99 - 565
Target Start/End: Complemental strand, 10579502 - 10579036
Alignment:
| Q |
99 |
gggagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaa |
198 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||| ||||| |||||||| |||||||||| | ||||||||||||||||||||||||||||| ||| |
|
|
| T |
10579502 |
gggagagtgttgaacatattgggtggaagagaaccactaaagctattcgcttcaactgagatccccgtaagagatgacatattataaagacaagaaagaa |
10579403 |
T |
|
| Q |
199 |
atgtaccagacaaattgttggcatgcactgctatagcccataactgttttaggaagcacatttcctgtggaatatttcccaccaagttattataactgat |
298 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| | |||||||||| |||||| ||||| ||||||||||||| |||||||||||||||| || |
|
|
| T |
10579402 |
atgtaccagacaacttgttggcatgcactgctataaacttcaactgttttaagaagcaaatttcacgtggaatatttcctaccaagttattataaccaat |
10579303 |
T |
|
| Q |
299 |
cgataaaatatcaagggatgaaagattacctatggatggtgggatttttccggataaattgtttctctcaatgaagaaattttgaagcttttgaagagaa |
398 |
Q |
| |
|
|| ||||||| ||| ||||||||||| | ||||||||||||||||||||| |||||||||||| | | || ||||| | ||||||||||||||||| |
|
|
| T |
10579302 |
tgaaaaaatattaagagatgaaagattccttatggatggtgggatttttcccgataaattgtttgttccgatatagaaaatgtgaagcttttgaagagag |
10579203 |
T |
|
| Q |
399 |
ccaatttggctaggtaatttaccaatcaaattgtttccttccaagtctatggttttgagctcatagcactttgtcaagtttataggaaattccccaacca |
498 |
Q |
| |
|
|||| ||||||||||| ||| |||| | ||||||||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||||||| ||||||| |
|
|
| T |
10579202 |
ccaaattggctaggtatttttccaaaaagtttgtttccttctaagtctacgcttttgagctcagagcagtttgtcaaggttaaaggaaattctccaacca |
10579103 |
T |
|
| Q |
499 |
acgagttgttgagtagaaggagataccctaattttgacaaacgacccaattcttgtggaatgtttcc |
565 |
Q |
| |
|
||||||||| |||||| | ||| | |||| ||| ||||||||| |||||||||||||||||| |
|
|
| T |
10579102 |
gagagttgttggatagaagaaaatatcttaatcgtgataaacgacccgtttcttgtggaatgtttcc |
10579036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 7191575 - 7191404
Alignment:
| Q |
24 |
gaagaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggggagagtgtggaacatattgggtg |
123 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||||| |||| ||||| | |||||||| ||||||| ||| |||| |||||||||||||| |
|
|
| T |
7191575 |
gaagaagcatttgaaatggaaatagggattgtacctgagaattgatttcctccgattgctaaatattgaagattggagagggtgttgaacatattgggtg |
7191476 |
T |
|
| Q |
124 |
gaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaag |
195 |
Q |
| |
|
||||||| ||| |||| ||||| |||| | || || | |||||||||||||||||||||||||||||| |
|
|
| T |
7191475 |
gaagagatccattaaaattattgaatgcagcggaaatgaaagtaagagatgacatattataaagacaagaag |
7191404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 24 - 206
Target Start/End: Original strand, 10661724 - 10661906
Alignment:
| Q |
24 |
gaagaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggggagagtgtggaacatattgggtg |
123 |
Q |
| |
|
||||||||||||| ||| ||| |||||||| |||||| |||| |||| ||||| | |||||||| ||||||| ||| |||| ||||||||||| || |
|
|
| T |
10661724 |
gaagaagcatttgcaatggaaatagggattgtacctgaaaattcatttcttccgattgcgaaatattgaagattggagagggtgttgaacatattggatg |
10661823 |
T |
|
| Q |
124 |
gaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaaatgtacca |
206 |
Q |
| |
|
||||||| ||| |||| | ||| | | |||||||||| | | |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10661824 |
gaagagatccattaaaatcattgggtccaactgagatcccagttagagatgacatattataaagacaagaaggaaatgaacca |
10661906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 19607573 - 19607698
Alignment:
| Q |
93 |
agattggggagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaag |
192 |
Q |
| |
|
|||||| ||||||| | |||||| || | |||||||||||| |||||| ||| |||||| |||| || | |||||||||||||||| ||||||||| |
|
|
| T |
19607573 |
agattgcggagagtattgaacatgttatgaggaagagagccattaaagtgattagctgcagctgatatcatagtaagagatgacatattgaaaagacaag |
19607672 |
T |
|
| Q |
193 |
aaggaaatgtaccagacaaattgttg |
218 |
Q |
| |
|
|||||||||||||||| || |||||| |
|
|
| T |
19607673 |
aaggaaatgtaccagataatttgttg |
19607698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 9837952 - 9838148
Alignment:
| Q |
9 |
tcaaataatgtcaaagaagaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggggagagtgt |
108 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||| ||||| |||||| |||| ||| |||||| ||| | |||| || ||||||| |||||||| | |
|
|
| T |
9837952 |
tcaaatgatgtcaaagtagaagcatttacaatggaagttgggattgaacctaagattttattccctcctatttcaaaagatcggagattagggagagttt |
9838051 |
T |
|
| Q |
109 |
ggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaaatgtacc |
205 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||| ||| |||| |||||| | | |||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
9838052 |
ggaacatatttgatggaagagagccactaaagtgattatctgctgttgagatcaatgtaagagatgacatattgtagagacaaggtggaaatgtacc |
9838148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 10653841 - 10654025
Alignment:
| Q |
24 |
gaagaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggggagagtgtggaacatattgggtg |
123 |
Q |
| |
|
||||||||||||| ||| ||| |||||||| ||||||||||| ||| ||| | | ||| |||| ||||||| || |||| ||||||||| | || |
|
|
| T |
10653841 |
gaagaagcatttgcaatggaaatagggattgtacctgagaattgattggatgcaatatagaaacattgaagattggaaagggtgttgaacatatttgatg |
10653940 |
T |
|
| Q |
124 |
gaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaaatgtaccaga |
208 |
Q |
| |
|
||||||| ||| |||| ||||| || ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
10653941 |
gaagagatccattaaatttattgagtgttactgagatataagtaagagatgacatattataaaaacaagaatgaaatgtaccaga |
10654025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 10594263 - 10594144
Alignment:
| Q |
89 |
ttggagattggggagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaaga |
188 |
Q |
| |
|
|||||||||||||||||| |||||||| | |||||||||||||||| ||| |||| |||| ||||||| | ||||||||| |||||| | |||| |
|
|
| T |
10594263 |
ttggagattggggagagtttggaacatgtcgggtggaagagagccaccgaagctatttgctggggctgagatgccagtaagagatgtcatattgtgaaga |
10594164 |
T |
|
| Q |
189 |
caagaaggaaatgtaccaga |
208 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
10594163 |
caaggtggaaatgtaccaga |
10594144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 10748722 - 10748847
Alignment:
| Q |
92 |
gagattggggagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaa |
191 |
Q |
| |
|
||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| | | | ||||| | || ||||| ||||||||||||||| |
|
|
| T |
10748722 |
gagattggggagagtgttgaacaagttggatggaagagagccaataaatttattttcggttagtgagagttgagttagtgatgagatattataaagacaa |
10748821 |
T |
|
| Q |
192 |
gaaggaaatgtaccagacaaattgtt |
217 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
10748822 |
gaaggaaacataccagacaaattgtt |
10748847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 10549288 - 10549179
Alignment:
| Q |
99 |
gggagagtgtggaacatattgggtggaagagagccaataaagttattcgctgcaactgagataactttaagagatgacatattataaagacaagaaggaa |
198 |
Q |
| |
|
|||||||||| ||||| |||| |||||| |||||| ||| | ||| | |||| ||||||| | |||||||||||||||| |||||||| |||||| |
|
|
| T |
10549288 |
gggagagtgttaaacatgttggatggaagtgagccatcaaactgatttgatgcagctgagatcatagtaagagatgacatattgtaaagacacaaaggaa |
10549189 |
T |
|
| Q |
199 |
atgtaccaga |
208 |
Q |
| |
|
|||||||||| |
|
|
| T |
10549188 |
atgtaccaga |
10549179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 10218429 - 10218487
Alignment:
| Q |
88 |
attggagattggggagagtgtggaacatattgggtggaagagagccaataaagttattc |
146 |
Q |
| |
|
|||||||||||||||| | || ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
10218429 |
attggagattggggagggcatgaaacatgttgggtggaagagagccataaaagttattc |
10218487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 12930844 - 12930736
Alignment:
| Q |
26 |
agaagcatttgaaattgaagtagggattcgacctgagaatttatttgatccgaccgtaaaatattggagattggggagagtgtggaacatattgggtgga |
125 |
Q |
| |
|
||||||||||| ||| |||||||||||| |||||||||||| ||||| | | | | || ||| | ||||||||| ||||||||||| ||||||||| |
|
|
| T |
12930844 |
agaagcatttgcaatcgaagtagggattggacctgagaattgatttgctgcaaaagcgaatatttgaatattggggagggtgtggaacatgttgggtgga |
12930745 |
T |
|
| Q |
126 |
agagagcca |
134 |
Q |
| |
|
| ||||||| |
|
|
| T |
12930744 |
aaagagcca |
12930736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 12898066 - 12898025
Alignment:
| Q |
93 |
agattggggagagtgtggaacatattgggtggaagagagcca |
134 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| ||||||| |
|
|
| T |
12898066 |
agattggggagggtgtggaacatgttgggtggaaaagagcca |
12898025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 12905688 - 12905647
Alignment:
| Q |
93 |
agattggggagagtgtggaacatattgggtggaagagagcca |
134 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| ||||||| |
|
|
| T |
12905688 |
agattggggagggtgtggaacatgttgggtggaaaagagcca |
12905647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 12956579 - 12956538
Alignment:
| Q |
93 |
agattggggagagtgtggaacatattgggtggaagagagcca |
134 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| ||||||| |
|
|
| T |
12956579 |
agattggggagggtgtggaacatgttgggtggaaaagagcca |
12956538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 12897993 - 12897941
Alignment:
| Q |
166 |
taagagatgacatattataaagacaagaaggaaatgtaccagacaaattgttg |
218 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
12897993 |
taagtgatgagatattataaagacaagaaggaatcttaccggacaaattgttg |
12897941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 17925114 - 17925166
Alignment:
| Q |
93 |
agattggggagagtgtggaacatattgggtggaagagagccaataaagttatt |
145 |
Q |
| |
|
||||||||||| |||||||| || |||||||||| |||||| | ||||||||| |
|
|
| T |
17925114 |
agattggggagggtgtggaagatgttgggtggaaaagagccgagaaagttatt |
17925166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University