View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7144_low_10 (Length: 469)

Name: NF7144_low_10
Description: NF7144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7144_low_10
NF7144_low_10
[»] chr8 (24 HSPs)
chr8 (94-450)||(43596638-43596995)
chr8 (94-290)||(32962023-32962219)
chr8 (94-293)||(16295302-16295500)
chr8 (94-293)||(16303004-16303202)
chr8 (94-290)||(37246132-37246327)
chr8 (94-290)||(15268593-15268788)
chr8 (1-97)||(43597032-43597128)
chr8 (1-97)||(16295536-16295632)
chr8 (1-97)||(16303238-16303334)
chr8 (1-97)||(40953429-40953525)
chr8 (1-99)||(27696427-27696526)
chr8 (94-223)||(40953263-40953392)
chr8 (94-203)||(11656345-11656454)
chr8 (1-94)||(15268829-15268922)
chr8 (195-290)||(16456463-16456558)
chr8 (9-97)||(11656221-11656308)
chr8 (1-99)||(37246361-37246456)
chr8 (94-239)||(27696250-27696392)
chr8 (1-87)||(42180522-42180606)
chr8 (195-275)||(11657003-11657083)
chr8 (244-290)||(42180469-42180515)
chr8 (8-96)||(8490907-8490995)
chr8 (187-297)||(8491109-8491219)
chr8 (1-97)||(16456679-16456774)
[»] chr5 (27 HSPs)
chr5 (94-293)||(7883773-7883972)
chr5 (94-290)||(29860835-29861031)
chr5 (94-299)||(33007994-33008198)
chr5 (94-299)||(5868270-5868474)
chr5 (95-299)||(15922184-15922388)
chr5 (94-290)||(31077815-31078010)
chr5 (157-290)||(42683974-42684107)
chr5 (1-97)||(33134286-33134382)
chr5 (141-285)||(2498908-2499052)
chr5 (1-97)||(21091129-21091225)
chr5 (1-97)||(25346918-25347014)
chr5 (1-97)||(29861067-29861163)
chr5 (94-254)||(33134090-33134249)
chr5 (8-97)||(15922057-15922146)
chr5 (143-252)||(25347110-25347219)
chr5 (1-97)||(5868154-5868250)
chr5 (1-97)||(33007863-33007957)
chr5 (8-97)||(7883664-7883753)
chr5 (120-290)||(39351244-39351414)
chr5 (9-91)||(42683807-42683889)
chr5 (95-238)||(21092381-21092522)
chr5 (40-94)||(31078047-31078101)
chr5 (143-291)||(8095833-8095981)
chr5 (17-97)||(2499110-2499188)
chr5 (1-47)||(31078118-31078164)
chr5 (1-65)||(8096077-8096141)
chr5 (1-65)||(39351493-39351557)
[»] chr2 (16 HSPs)
chr2 (94-290)||(13996151-13996347)
chr2 (94-290)||(40619694-40619890)
chr2 (94-290)||(13349499-13349695)
chr2 (104-282)||(41595218-41595394)
chr2 (157-281)||(27338697-27338821)
chr2 (152-290)||(37485569-37485706)
chr2 (1-97)||(27338910-27339007)
chr2 (1-97)||(40619561-40619657)
chr2 (9-97)||(41595441-41595529)
chr2 (1-97)||(37485773-37485869)
chr2 (1-95)||(19695886-19695980)
chr2 (183-290)||(19695473-19695580)
chr2 (94-191)||(19695752-19695849)
chr2 (54-97)||(13996071-13996114)
chr2 (20-62)||(13995630-13995672)
chr2 (1-67)||(15665263-15665328)
[»] chr1 (13 HSPs)
chr1 (94-290)||(49549481-49549676)
chr1 (94-290)||(28622911-28623107)
chr1 (94-290)||(37347010-37347206)
chr1 (1-97)||(28622778-28622874)
chr1 (112-285)||(35508851-35509024)
chr1 (95-290)||(19909969-19910164)
chr1 (2-98)||(19910201-19910297)
chr1 (1-97)||(37346224-37346322)
chr1 (143-291)||(10306840-10306988)
chr1 (182-250)||(52267631-52267699)
chr1 (244-297)||(8286608-8286661)
chr1 (1-97)||(52267891-52267985)
chr1 (143-226)||(12856915-12856996)
[»] chr6 (16 HSPs)
chr6 (94-290)||(12255078-12255274)
chr6 (94-261)||(9314804-9314970)
chr6 (142-288)||(23404456-23404602)
chr6 (94-294)||(10789421-10789622)
chr6 (143-290)||(32329318-32329464)
chr6 (1-97)||(391151-391247)
chr6 (1-97)||(9315007-9315103)
chr6 (94-301)||(29979398-29979601)
chr6 (9-97)||(10789296-10789384)
chr6 (1-97)||(32329540-32329636)
chr6 (1-97)||(23404686-23404782)
chr6 (1-95)||(12255313-12255408)
chr6 (27-97)||(29979291-29979361)
chr6 (1-97)||(24660659-24660755)
chr6 (143-239)||(24660840-24660937)
chr6 (192-289)||(12267316-12267413)
[»] chr3 (16 HSPs)
chr3 (94-290)||(28457782-28457973)
chr3 (94-272)||(21748393-21748571)
chr3 (94-290)||(40701024-40701220)
chr3 (123-299)||(7818444-7818619)
chr3 (94-290)||(33072591-33072787)
chr3 (1-97)||(28457649-28457745)
chr3 (1-97)||(21748273-21748373)
chr3 (1-95)||(40700892-40700986)
chr3 (177-291)||(21495052-21495165)
chr3 (142-295)||(45853152-45853303)
chr3 (1-97)||(4384899-4384995)
chr3 (157-290)||(41865771-41865904)
chr3 (1-65)||(43462849-43462913)
chr3 (202-286)||(46663175-46663259)
chr3 (1-65)||(46663420-46663484)
chr3 (244-297)||(30271850-30271903)
[»] chr4 (27 HSPs)
chr4 (94-289)||(34940259-34940454)
chr4 (94-287)||(45499175-45499368)
chr4 (94-290)||(3767703-3767899)
chr4 (94-290)||(28115924-28116120)
chr4 (94-264)||(34513752-34513922)
chr4 (94-230)||(37910661-37910797)
chr4 (1-96)||(3767937-3768032)
chr4 (1-97)||(45499040-45499138)
chr4 (1-95)||(34514046-34514139)
chr4 (1-97)||(28115791-28115887)
chr4 (1-97)||(34940491-34940587)
chr4 (1-97)||(5787169-5787262)
chr4 (203-293)||(21342155-21342245)
chr4 (1-97)||(37910530-37910625)
chr4 (106-239)||(17702146-17702279)
chr4 (9-82)||(36198689-36198762)
chr4 (219-290)||(37911176-37911247)
chr4 (202-293)||(53923640-53923731)
chr4 (122-234)||(54103379-54103491)
chr4 (97-247)||(53923729-53923879)
chr4 (250-293)||(31309633-31309676)
chr4 (177-281)||(3319677-3319782)
chr4 (94-205)||(5787299-5787410)
chr4 (104-174)||(44290176-44290246)
chr4 (56-97)||(44290088-44290129)
chr4 (188-284)||(3692637-3692733)
chr4 (8-64)||(44289502-44289558)
[»] chr7 (20 HSPs)
chr7 (153-300)||(15673010-15673159)
chr7 (94-263)||(34703029-34703198)
chr7 (95-290)||(18503076-18503273)
chr7 (1-99)||(34866309-34866407)
chr7 (12-99)||(15672839-15672926)
chr7 (142-290)||(25102601-25102754)
chr7 (143-283)||(6110119-6110255)
chr7 (1-97)||(34703236-34703334)
chr7 (1-97)||(18502939-18503038)
chr7 (1-95)||(3480610-3480704)
chr7 (138-263)||(15524378-15524503)
chr7 (157-290)||(32585810-32585943)
chr7 (11-74)||(6110322-6110385)
chr7 (143-226)||(34183102-34183185)
chr7 (143-226)||(34203691-34203774)
chr7 (153-238)||(28428961-28429046)
chr7 (195-291)||(24429348-24429444)
chr7 (143-238)||(31804843-31804939)
chr7 (1-65)||(34183284-34183348)
chr7 (1-65)||(34203873-34203937)
[»] scaffold0817 (1 HSPs)
scaffold0817 (233-290)||(4-61)
[»] scaffold0957 (1 HSPs)
scaffold0957 (143-254)||(1659-1770)
[»] scaffold0702 (1 HSPs)
scaffold0702 (143-250)||(4021-4127)
[»] scaffold0662 (1 HSPs)
scaffold0662 (143-250)||(3975-4081)


Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 94 - 450
Target Start/End: Complemental strand, 43596995 - 43596638
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  43596995 aaataaggagtgatcttctaatctcatcaggataatttttaactcaatctatactcaggatataaattacaaaggaaagtcgggatatgatagaaaaatg 43596896  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  43596895 atttattttatcctatctctttcgtgcatcaaacatgatatttaagtcggatatgattaatgtatcatatcctgactccctatcctggccatcaaacaga 43596796  T
Q  294 tcctaaaggttttcgtggaacagtctgtgtcgattctaaagccaaaaaataatctaatctaattatctaaagataaagtcacattcgttttggttggact 393  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43596795 tcctaaaggttttcatggaacagtctgtatcgattctaaagccaaaaaataatctaatttaattatctaaagataaagtcacattcgttttggttggact 43596696  T
Q  394 atttaatttttcttattcaatttaaacaattttcaac-aaaaaatatctcaatacagt 450  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||    
T  43596695 atttaatttttctgattcaatttaaacaattttcaccaaaaaaatatctcaatacagt 43596638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 32962219 - 32962023
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    |||| |||| |||||||||||||||||||||||||||| |||  ||   | ||||||||||| ||||||||||| |||||| |||||||||||||||||     
T  32962219 aaatgaggaatgatcttctaatctcatcaggataatttataactcagcttgtactcaggatagaaattacaaaggaaagtcaggatatgataggaaaata 32962120  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     |||||||||| ||||| | || |||||||||||||||||||||||  | ||||||||||||||||||||| | |||||||||||||||||||||||    
T  32962119 gtttattttattctatcccattggtgcatcaaacatgagatttaagcaggatatgattaatgtatcatatcatatctccctatcctgaccatcaaac 32962023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 94 - 293
Target Start/End: Complemental strand, 16295500 - 16295302
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||||||| |||| |||||| ||||||| ||| | | ||||||||||||||||||||||||||| |||||| |||||||||||| ||||     
T  16295500 aaataaggaatgatcttccaatcccatcag-ataatttctaacctagtctatactcaggatataaattacaaaggaaagtcaggatatgatagggaaatt 16295402  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
     |||||| ||| |||||||||| ||||||||||||||| |||||||  | ||||||||||||||||||||  |||||| ||||| |||||||||||||||    
T  16295401 gtttattgtatgctatctctttagtgcatcaaacatgatatttaagcaggatatgattaatgtatcatattatgtctctctatcttgaccatcaaacaga 16295302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 94 - 293
Target Start/End: Complemental strand, 16303202 - 16303004
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||||||| |||| |||||| ||||||| ||| | | ||||||||||||||||||||||||||| |||||| |||||||||||| ||||     
T  16303202 aaataaggaatgatcttccaatcccatcag-ataatttctaacctagtctatactcaggatataaattacaaaggaaagtcaggatatgatagggaaatt 16303104  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
     |||||| ||| |||||||||| ||||||||||||||| |||||||  | ||||||||||||||||||||  |||||| ||||| |||||||||||||||    
T  16303103 gtttattgtatgctatctctttagtgcatcaaacatgatatttaagcaggatatgattaatgtatcatattatgtctctctatcttgaccatcaaacaga 16303004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 37246327 - 37246132
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| | |||||||||||| ||| | |  ||||||||| |||||||||||||||| |||||| | ||||| |||| |||||    
T  37246327 aaataaggaatgatcttctaatcccctcaggataatttctaacctagcctatactcaagatataaattacaaaggaaagtcagaatatg-tagggaaatg 37246229  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
      |||||||||||||||| ||| ||||||||||||||| |||||||  | ||||||||||||||||||||| |||||||||||| | ||||||||||    
T  37246228 ggttattttatcctatctttttagtgcatcaaacatgatatttaagcaggatatgattaatgtatcatatcatgtctccctatctttaccatcaaac 37246132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 15268788 - 15268593
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    |||||||||  |||||| ||||| ||| |||||||||| ||| |||   |||||| || ||| ||||||||||| |||||||||||| ||||||||||||    
T  15268788 aaataaggaacgatcttttaatc-cattaggataatttctaacccagcatatacttagaataaaaattacaaaggaaagtcgggataggataggaaaatg 15268690  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||||||||  |||  || |||||||||||||||| ||  | ||||||||||||||||||||||||||||| |||||||||||||||||    
T  15268689 gtttattttatcctatccatttgttgtatcaaacatgagatttcagcaggatatgattaatgtatcatatcctgtctccttatcctgaccatcaaac 15268593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43597128 - 43597032
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43597128 ttaaatgaaaaaattgttctcataactaattaaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattatttttaaaat 43597032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16295632 - 16295536
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  16295632 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatggtatgttattaattataatagaaaatacatgctataactattttaaaaat 16295536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16303334 - 16303238
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  16303334 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatggtatgttattaattataatagaaaatacatgctataactattttaaaaat 16303238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40953525 - 40953429
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40953525 ttaaatgaaaaaattgctctcataattaattaaatattataaaaatgacatgttattaattataataaaaaatacatgctatcattattttaaaaat 40953429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27696526 - 27696427
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaa-tggcatgttattaattataatagaaaatacatgctatgattattttaaaaataa 99  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  27696526 ttaaatgaaaaaattgctctcataattaattaaatattataaaaaatggcatattattaattataatagaaaatacatgctatcattattttaaaaataa 27696427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 94 - 223
Target Start/End: Complemental strand, 40953392 - 40953263
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| ||| |  ||||||| ||| |||  |||||||||||||| ||||||||||| |||||| ||||||||||| ||||||    
T  40953392 aaataaggaatgatcttctaatcccattataataatttctaacccagcctatactcaggataaaaattacaaaggaaagtcaggatatgatagaaaaatg 40953293  T
Q  194 atttattttatcctatctcttttgtgcatc 223  Q
    |||||||| ||| ||||||||| |||||||    
T  40953292 atttatttcatcatatctctttggtgcatc 40953263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 11656345 - 11656454
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||||||| |||||||||| ||| |||| ||||| |||||||| ||||||||||| |||||| ||||| ||||| ||||||    
T  11656345 aaataaggaatgatcttctaatctcattaggataatttctaacccaacctatattcaggatagaaattacaaaggaaagtcaggataggatagaaaaatg 11656444  T
Q  194 atttatttta 203  Q
     |||||||||    
T  11656445 gtttatttta 11656454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15268922 - 15268829
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaa 94  Q
    ||||||| ||||||||| ||||||| ||||| |||||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  15268922 ttaaatggaaaaattgcactcataattaattaaatattgtagaaatggcatgtgattaattataatagaaaatacatgctatcattattttaaa 15268829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 16456558 - 16456463
Alignment:
Q  195 tttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||| || ||||||||   |||||| |||||||||||||||||    
T  16456558 tttattttatcttatctctttggtgcatcaaacatgatatttaagtagaatatgattgatatatcatatttcgtctccttatcctgaccatcaaac 16456463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 11656221 - 11656308
Alignment:
Q  9 aaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||| |||||| | ||| |||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  11656221 aaaaattgctttcataattgattaaatattgtaaaaatggcatgttat-aattataatagaaattacatgctatcattattttaaaaat 11656308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37246456 - 37246361
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaataa 99  Q
    ||||||||| ||||||||||||||| ||||| |||||| ||||| |   ||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  37246456 ttaaatgaataaattgctctcataattaattaaatattgtaaaagt---atgttattaattataatagaaaatacatgttataactattttaaaaataa 37246361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 27696392 - 27696250
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||||| |||||| ||||| |||||||| ||| | |   ||||| |||||||||||||||||||||   ||  |||| |||||||||||     
T  27696392 aaataaggaatgatctcctaatcccatcaagataatttctaacctagcttatacacaggatataaattacaaagaa---tcaagataagataggaaaata 27696296  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaag 239  Q
     ||||||||||| ||||  ||| |||||||||||||||||||||||    
T  27696295 gtttattttatcatatccatttggtgcatcaaacatgagatttaag 27696250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42180606 - 42180522
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgatta 87  Q
    |||||| |||||||||||||| ||| ||||| ||||||  |||||||| |||||||||||||||||| |||||||||||||| ||||    
T  42180606 ttaaataaaaaaattgctctcttaattaattaaatatt--aaaaatggaatgttattaattataataaaaaatacatgctatcatta 42180522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 11657003 - 11657083
Alignment:
Q  195 tttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctcccta 275  Q
    ||||||||||| |||| |||| || ||||||||||||||||||||  | ||||||||||||||||||||  ||||||||||    
T  11657003 tttattttatcatatccctttggtacatcaaacatgagatttaagcaggatatgattaatgtatcatatattgtctcccta 11657083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 42180515 - 42180469
Alignment:
Q  244 atatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  42180515 atatgattaatgtatcatattctgtctccctatcctgaccatcaaac 42180469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 8490907 - 8490995
Alignment:
Q  8 aaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaa 96  Q
    ||||| || ||||||||| ||||| |||||| |||||||| ||||| ||||||||||| |  |||| |||| ||| |||||||||||||    
T  8490907 aaaaatttactctcataattaattaaatattataaaaatgacatgtaattaattataacaacaaatccatgttatcattattttaaaaa 8490995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 297
Target Start/End: Original strand, 8491109 - 8491219
Alignment:
Q  187 gaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatc 286  Q
    ||||||||||||||||||| |||||||||  | ||||||| |||| ||||||     ||||||||||| || |||||  ||||||| |||||| |||| |    
T  8491109 gaaaatgatttattttatcatatctctttgatacatcaaatatgatatttaaacaagatatgattaatataccatattatgtctccttatcctcaccacc 8491208  T
Q  287 aaacagatcct 297  Q
    ||||| |||||    
T  8491209 aaacaaatcct 8491219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16456774 - 16456679
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||| |||||||| ||||||||| || || ||||||||||||||| |||   |||||||||||||  ||| |  || ||| ||||||||||||||    
T  16456774 ttaaataaaaaaattactctcataattatttaaatattttaaaaatgacat-cgattaattataataacaaacatttgatatcattattttaaaaat 16456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 3e-61; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 94 - 293
Target Start/End: Original strand, 7883773 - 7883972
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||  |||||||||| ||| ||||||||||| ||| || | ||| ||||||||||||    
T  7883773 aaataaggaatgatcttctaatcccatcaggataatttctaatccagcctatactcagaatagaaattacaaaggaaattcagaataggataggaaaatg 7883872  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
     |||||||||||||||| ||||  |||||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7883873 gtttattttatcctatccctttgatgcatcaaacataagatttaagcaggatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 7883972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 29861031 - 29860835
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| |||   |  |||||||||||||||||||||||||| ||||||  ||||||||||| |||||    
T  29861031 aaataaggaatgatcttctaatcccatcaggataatttctaacttagcctatactcaggatataaattacaaaggaaagtcatgatatgatagggaaatg 29860932  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  29860931 gtttattttatcctatctctttggtgcatcaaacatgaaatttaagcagaatatgattaatgtatcatatcatgtctccctatactggccatcaaac 29860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 94 - 299
Target Start/End: Original strand, 33007994 - 33008198
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||   ||||||||||||| ||||||||||| |||||| ||||||||||| ||||||    
T  33007994 aaataaggaatgatcttctaatcccatcaggataatttctaacccagcttatactcaggataaaaattacaaaggaaagtcaggatatgatag-aaaatg 33008092  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
    ||||||||||||||||| |||| ||  ||||||| ||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33008093 atttattttatcctatccctttggtctatcaaacgtgatatttaagcaggatataattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 33008192  T
Q  294 tcctaa 299  Q
     |||||    
T  33008193 ccctaa 33008198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 94 - 299
Target Start/End: Original strand, 5868270 - 5868474
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    |||||| || ||||||||||| | |||||||||| ||| ||| |||  | ||||||| |||| ||||||||||| |||||||||||| ||||||||||||    
T  5868270 aaataacgaatgatcttctaacc-catcaggatagtttctaacccagccaatactcaagatagaaattacaaaggaaagtcgggataggataggaaaatg 5868368  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
     ||||||||||||||||||||| |||||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||||||||||| ||    
T  5868369 gtttattttatcctatctctttggtgcatcaaacatgagatttaagtaggatgtgattaatatatcatatcttgtctccctatcctgaccatcaaacgga 5868468  T
Q  294 tcctaa 299  Q
     |||||    
T  5868469 ccctaa 5868474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 95 - 299
Target Start/End: Original strand, 15922184 - 15922388
Alignment:
Q  95 aataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatga 194  Q
    |||||||| ||||||||||||| |||||||||||||| ||| |||| | |||||||  ||| ||||||||||| ||||||  |||||||||| ||||| |    
T  15922184 aataaggattgatcttctaatcccatcaggataatttctaacccaaccgatactcaaaatagaaattacaaaggaaagtcatgatatgatagaaaaataa 15922283  T
Q  195 tttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacagat 294  Q
    ||||||||||| |||| ||||  ||||||||||||||||||||||    ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  15922284 tttattttatcatatcactttgatgcatcaaacatgagatttaagcaagatatgattaatgtatcatatcctgtatctctatcctgaccatcaaacagat 15922383  T
Q  295 cctaa 299  Q
    |||||    
T  15922384 cctaa 15922388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 31078010 - 31077815
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| |||  ||   ||||||||||||||||||||||||| ||||||  ||||  ||| ||||||     
T  31078010 aaataaggaatgatcttctaatc-catcaggataatttctaactcagcttatactcaggatataaattacaaaggaaagtcatgatagaataagaaaata 31077912  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     |||||||||||||| | |||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||  ||||||||||||| ||||    
T  31077911 gtttattttatcctaaccctttggtgcatcaaacattagatttaagtagaatatgattaatgtatcatatcctatctgtctatcctgaccattaaac 31077815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 42683974 - 42684107
Alignment:
Q  157 aaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgt 256  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||| |||| ||||  ||| | ||||||||||||||||  | |||||||||||||    
T  42683974 aaattacaaaggaaagtcaggatatgatagaaaaatgatttattttatcttatccctttgatgcttgaaacatgagatttaagcaggatatgattaatgt 42684073  T
Q  257 atcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||| |||||||||||||| ||||||||||    
T  42684074 atcatatcatgtctccctatcctaaccatcaaac 42684107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 33134382 - 33134286
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33134382 ttaaatgaaaaaattgctctcataattaattaaatattataaaaattgcatgttattaattataatagaaaatacatgctatcattattttaaaaat 33134286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 2499052 - 2498908
Alignment:
Q  141 tctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagt 240  Q
    |||||| |||||||| ||||||||||||| ||||  |||| ||||| |||||||||||||||| | ||||||||  ||||||||||||||| ||||||||    
T  2499052 tctatattcaggataaaaattacaaagaatagtcaagataagatagaaaaatgatttattttaccatatctcttgggtgcatcaaacatgatatttaagt 2498953  T
Q  241 cgaatatgattaatgtatcatatcctgtctccctatcctgaccat 285  Q
     ||||||||||||| |||||||||  ||||| ||||||| |||||    
T  2498952 agaatatgattaatatatcatatcacgtctctctatccttaccat 2498908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21091129 - 21091225
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21091129 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaagtgacatgttattaattataatagaaaatacatgctatcattattttaaaaat 21091225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25346918 - 25347014
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  25346918 ttaaatgaaaaaattgctctcataattatttaaatattgtaaaaatggcatgttattaattacaatggaaaatacatgctatcattattttaaaaat 25347014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29861163 - 29861067
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||||||||| |||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  29861163 ttaaatgaaaaaattgctttcataattaattaaatattgtaaaaatggtatgttattaattataatagaaaatacatgctataactattttaaaaat 29861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 33134249 - 33134090
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||  ||| |||||||||| ||| | |  ||||||||| |||| ||||||||||| |||||| ||||| ||||||||||||    
T  33134249 aaataaggaatgatcttctaattccat-aggataatttctaacctagcctatactcatgatagaaattacaaaggaaagtcaggataggataggaaaatg 33134151  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaat 254  Q
     |||||||||||||||| |||| |||||| |||||| |||||||||  | |||||||||||    
T  33134150 gtttattttatcctatccctttggtgcattaaacataagatttaagcaggatatgattaat 33134090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 15922057 - 15922146
Alignment:
Q  8 aaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||||||||| ||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  15922057 aaaaaattgctctcataattaattaaatattgtaaaaatgacatattattaattataatagaaaatacatgctatcattattttaaaaat 15922146  T

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Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 25347110 - 25347219
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||||| | |||| ||||||||||| ||| || |||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||  |    
T  25347110 tatactaatgatagaaattacaaaggaaaatcaggatatgataggaaaatggtttattttatcctatccctttggtgcatcaaacatgagatttaaggag 25347209  T
Q  243 aatatgatta 252  Q
     |||||||||    
T  25347210 gatatgatta 25347219  T

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Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 5868154 - 5868250
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||| ||||||||| ||||  |||||| |||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||    
T  5868154 ttaaatgaaaaaattactctcataattaatgaaatattgtaaaaatggcatataattaattataatagaaaatacatgatatcattattttaaaaat 5868250  T

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Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33007863 - 33007957
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||||||||||||||    
T  33007863 ttaaatgaaaaaattgctctcatatttaattaaatattataaaaatggcacgttattaattataatag--aatacatcctatcattattttaaaaat 33007957  T

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Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 7883664 - 7883753
Alignment:
Q  8 aaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||||||||| | ||| |||||| ||||| ||||||  ||||||||||||||||||||||||| ||| ||||||||||||||    
T  7883664 aaaaaattgctctcataattgattaaatattgtaaaattggcatcctattaattataatagaaaatacatgttatcattattttaaaaat 7883753  T

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Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 120 - 290
Target Start/End: Complemental strand, 39351414 - 39351244
Alignment:
Q  120 tcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtg 219  Q
    |||||||||||| ||| |||| ||| |||||||||| || ||||||||| ||||  | |||||||| |||||||||||||||||| |||||||||  ||     
T  39351414 tcaggataatttataacccaacctacactcaggataaaatttacaaagacaagttagtatatgatatgaaaatgatttattttattctatctcttcggta 39351315  T
Q  220 catcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     || |||||||||||| |||    |||| || ||| | |||||||||  ||||||||| || |||||||||    
T  39351314 tataaaacatgagattgaagcaagatatcataaatatttcatatcctacctccctatcttggccatcaaac 39351244  T

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Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 42683807 - 42683889
Alignment:
Q  9 aaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattatttt 91  Q
    ||||| || |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  42683807 aaaaaatgttctcataattaattaaatattataaaaatggcatgttattaattataatagaaaatatatgttattattatttt 42683889  T

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Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 95 - 238
Target Start/End: Original strand, 21092381 - 21092522
Alignment:
Q  95 aataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatga 194  Q
    |||||| | |||| ||||||||||||||||||||||| |||  || | |||| |||||||| |||||||| || |||||  |||||  ||||||||||||    
T  21092381 aataagaaatgatattctaatctcatcaggataatttataactcagtttatattcaggatagaaattacataggaaagtgaggataatataggaaaatga 21092480  T
Q  195 tttattttatcctatctcttttgtgcatcaaacatgagatttaa 238  Q
       |||||||||||||  ||| ||||||||||||||| ||||||    
T  21092481 --gattttatcctatccatttggtgcatcaaacatgaaatttaa 21092522  T

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Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 31078101 - 31078047
Alignment:
Q  40 taaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaa 94  Q
    ||||||||  |||||||||||||||||||||||||||||||||  ||||||||||    
T  31078101 taaaaatgatatgttattaattataatagaaaatacatgctatcgttattttaaa 31078047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 291
Target Start/End: Complemental strand, 8095981 - 8095833
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||| |||||||| |||||||||| | ||||  |||||  |||| ||||| ||||||||||| ||||||||||  ||||| ||||||||  |||||  |     
T  8095981 tatattcaggataaaaattacaaatataagttaggatagaatagaaaaataatttattttattctatctctttgatgcattaaacatgaattttaaacca 8095882  T
Q  243 aatatgattaatgtatcatatcctgtctccctatcctgaccatcaaaca 291  Q
    |||||||| ||| ||| ||| ||| | | |||||||  |||||||||||    
T  8095881 aatatgatgaatatatgataccctattttcctatccaaaccatcaaaca 8095833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 2499188 - 2499110
Alignment:
Q  17 ctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||| ||||| ||||||  ||||||||||||| |||||||| ||||  ||||||||| ||| ||||||||||||||    
T  2499188 ctctcataattaattaaatattg-aaaaatggcatgtaattaatta-aataacaaatacatgatatcattattttaaaaat 2499110  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31078164 - 31078118
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatg 47  Q
    |||||||||||||||| |||||||| ||||| |||||| ||||||||    
T  31078164 ttaaatgaaaaaattgttctcataattaattaaatattgtaaaaatg 31078118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8096141 - 8096077
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataa 65  Q
    |||||||| |||||| ||||| | | ||||| ||||||||||||| | ||||| |||||||||||    
T  8096141 ttaaatgagaaaattactctcgttattaattaaatattttaaaaacgacatgtaattaattataa 8096077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39351557 - 39351493
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataa 65  Q
    |||||||| ||||||  |||  ||| ||||| |||||||||||||||||| || |||||||||||    
T  39351557 ttaaatgagaaaattattcttgtaattaattaaatattttaaaaatggcacgtaattaattataa 39351493  T

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Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 13996151 - 13996347
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| ||||  ||||||||||||| ||||||||||| |||||| ||||||||||| || |||    
T  13996151 aaataaggaatgatcttctaatcccatcaggataatttctaacccaacttatactcaggatagaaattacaaaggaaagtcaggatatgatagaaacatg 13996250  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||||||| | || |||| |||||||||||||||||||||||  | |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  13996251 atttattttatcatgtccctttggtgcatcaaacatgagatttaaggaggatataattaatgtatcatatcccgtcttcctatcctgaccatcaaac 13996347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 40619694 - 40619890
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| ||| || ||||||| ||| |||| |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||    
T  40619694 aaataaggaatgatcttctaatcccataagtataatttctaacccaacctatactcaggatagaaattacgaaggaaagtcaggatatgatagaaaaatg 40619793  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||| |||| |||| |||||||||||||||||||||||  | ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40619794 gtttattttatcatatccctttggtgcatcaaacatgagatttaagcaggatatgattaatgtatcatatcctatctctctatcctgaccatcaaac 40619890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 13349499 - 13349695
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| |||  ||   |||||| |||||| ||||||||||| |||||  ||| | |||| ||| ||     
T  13349499 aaataaggaatgatcttctaatcgcatcaggataatttctaactcatcatatacttaggatagaaattacaaaggaaagttaggagaggataagaatatt 13349598  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||||||||  ||| |||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||| |||||||    
T  13349599 gtttattttatcctatccatttggtgcatcaaacatgagatttaagtaggatataattaatgtatcatatcctgtcttcctatcctgactatcaaac 13349695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 282
Target Start/End: Complemental strand, 41595394 - 41595218
Alignment:
Q  104 tgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttatttta 203  Q
    ||||||||||||| |||||||||||||| |||  |||  ||||||||||||| ||||||||| | |||||| | ||||||||| || ||| |||||||||    
T  41595394 tgatcttctaatcccatcaggataatttctaactcaacttatactcaggatagaaattacaatggaaagtcagaatatgatagaaatatggtttatttta 41595295  T
Q  204 tcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgac 282  Q
    ||| |||||||| |||||||||||||||||||||||    |||||||||||||||||||  |||||| |||||| ||||    
T  41595294 tccaatctctttggtgcatcaaacatgagatttaagcacgatatgattaatgtatcata--ctgtcttcctatcttgac 41595218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 27338821 - 27338697
Alignment:
Q  157 aaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgt 256  Q
    ||||||||||| |||||| ||||| ||||| |||||| ||||||||||| ||||  ||| |||||||||||||||||||||||| | |||||||||||||    
T  27338821 aaattacaaaggaaagtcaggataggatagaaaaatggtttattttatcatatcattttagtgcatcaaacatgagatttaagtaggatatgattaatgt 27338722  T
Q  257 atcatatcctgtctccctatcctga 281  Q
    |||||||||| ||||||||||||||    
T  27338721 atcatatcctatctccctatcctga 27338697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 37485706 - 37485569
Alignment:
Q  152 gatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgatt 251  Q
    |||| ||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||  | ||||||||    
T  37485706 gatagaaattacaaaggaaagtcaggatatgataggaaaatggtttattttatcatatctttttggtgcatcaaacatgagatttaagcaggatatgatt 37485607  T
Q  252 aatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    ||| ||| ||||| |||||| ||||||| ||||||||||    
T  37485606 aatatattatatcttgtctctctatcct-accatcaaac 37485569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 27339007 - 27338910
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaatta-taatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  27339007 ttaaatgaaaaaattgctctcataattaattaaatattataaaaatgacatgttattaattattaatagaaaatacatgctatcattattttaaaaat 27338910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40619561 - 40619657
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  40619561 ttaaatgaaaaaattgctctcatagttaattaaatattataaaaatggcaagttattaattataataaaaaatacatgctatcattattttaaaaat 40619657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 41595529 - 41595441
Alignment:
Q  9 aaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41595529 aaaaattgctctcataattaattaaatattataaaaatgacatgttattaattataatagaaaatacatgctatcattattttaaaaat 41595441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 37485869 - 37485773
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| || ||  |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37485869 ttaaatgaaaaaattgctctcataattaattaaagatcgtaaaaatgacatgttattaattataatagaaaatacatgttatcattattttaaaaat 37485773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19695980 - 19695886
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaa 95  Q
    ||||||||||||||||||||||||| ||||| |||| | ||||||||  ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19695980 ttaaatgaaaaaattgctctcataattaattaaatagtataaaaatgatatgttattaattataatagaaaatatatgctatcattattttaaaa 19695886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 290
Target Start/End: Complemental strand, 19695580 - 19695473
Alignment:
Q  183 ataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgac 282  Q
    |||| |||||| |||||| || ||||||  ||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||     
T  19695580 atagaaaaatggtttattctagcctatccatttggtgcatcaaacatgagatttacgtaggatatgattaatgtatcatatcctgtctctctatcctgat 19695481  T
Q  283 catcaaac 290  Q
    ||||||||    
T  19695480 catcaaac 19695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 19695849 - 19695752
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaa 191  Q
    ||||||||  ||||||||||||  |||||||||||||| |||  ||   |||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  19695849 aaataagggatgatcttctaattccatcaggataatttctaactcagcttatactcaagatagaaattacaaagaaaagtcgggataggataggaaaa 19695752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 13996071 - 13996114
Alignment:
Q  54 tattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  13996071 tattaattataataggaaatacatgctatcattattttaaaaat 13996114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 13995630 - 13995672
Alignment:
Q  20 tcataactaatttaatattttaaaaatggcatgttattaatta 62  Q
    |||||| ||||| |||||| |||||||||||||||||||||||    
T  13995630 tcataattaattaaatattataaaaatggcatgttattaatta 13995672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15665263 - 15665328
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataata 67  Q
    ||||||||| ||||| || |||||| ||||| |||||| |||||||| ||||| |||||||||||||    
T  15665263 ttaaatgaataaattactatcataattaattaaatattgtaaaaatg-catgtaattaattataata 15665328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 49549676 - 49549481
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||||||| |||| ||| ||||||| |||||| ||||||||||||||  ||||||||||||||| |||||| |||||||||||| |||||    
T  49549676 aaataaggaatgatcttcaaatcccattaggataacttttaacccaatctatactcat-atataaattacaaaggaaagtcaggatatgatagggaaatg 49549578  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||  | ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  49549577 atttattttatcctatccctttggtgcatcaaatatgagatttaagcaggatatgattaatgtatcatatcttgcctcactatcctgaccatcaaac 49549481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 28622911 - 28623107
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||||||||||||||||||||||||||| |||  ||   ||||||||||||| ||||||||||| |||||| ||||| ||||| |||||     
T  28622911 aaataaggaatgatcttctaatctcatcaggataatttctaacacagcttatactcaggataaaaattacaaaggaaagtcaggataggatagaaaaata 28623010  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     |||||||||| ||||| |||| ||||||||||||||  |||||| | | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  28623011 gtttattttattctatccctttggtgcatcaaacatggaatttaaataggatatgattaatgtatcatatcatgtctccctatcctgaccatcaaac 28623107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 37347010 - 37347206
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| ||||| |||||||| ||| |||   ||||||||||||| ||||||||||| ||| || ||||| ||||| ||||||    
T  37347010 aaataaggaatgatcttctaatcccatcatgataatttctaacccatcgtatactcaggatagaaattacaaaggaaaatcaggataggatagaaaaatg 37347109  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||| |||| |||| ||||||||||||| |||||||||    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  37347110 gtttattttatcatatccctttggtgcatcaaacataagatttaagcaagatatgattaatgtatcatattctgtctccctatcctgaccatcaaac 37347206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28622778 - 28622874
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  28622778 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatggcatgttattaattataatagaaaatacatgctatcattatttaaaaaat 28622874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 112 - 285
Target Start/End: Original strand, 35508851 - 35509024
Alignment:
Q  112 taatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatct 211  Q
    |||||| |||| |||| ||| |||  ||||| |||| ||||||| |||||||||||  ||||||  ||| |||| ||||||| |||||||||||||||||    
T  35508851 taatcttatcaagatagtttgtaactcaatccatacccaggataaaaattacaaaggcaagtcgtaataggataagaaaatggtttattttatcctatct 35508950  T
Q  212 cttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccat 285  Q
     ||| ||| ||||||||||||||||||||  |||||||| ||| |||||||| ||||||||||||| |||||||    
T  35508951 atttagtggatcaaacatgagatttaagtataatatgataaatatatcatatactgtctccctatcgtgaccat 35509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 95 - 290
Target Start/End: Complemental strand, 19910164 - 19909969
Alignment:
Q  95 aataaggagtgatcttctaatctc--atcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaat 192  Q
    |||||||  |||||||||||||||  || |||||||||| ||| ||| |  ||||||||||||  ||||| |||| |||||| | ||| ||||| |||||    
T  19910164 aataaggcatgatcttctaatctcttattaggataatttctaacccattaaatactcaggataacaattataaaggaaagtcagtatacgatagaaaaat 19910065  T
Q  193 gatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    | ||||||||||| |||||||||  |||||||||||||| |||||||   ||||| |||||||||||||||  |||||| ||||||| ||||||||||    
T  19910064 ggtttattttatcttatctctttgatgcatcaaacatgatatttaagcacaatataattaatgtatcatat--tgtctctctatcctaaccatcaaac 19909969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 19910297 - 19910201
Alignment:
Q  2 taaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattat-aatagaaaatacatgctatgattattttaaaaata 98  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  19910297 taaatgaaaaaattgctctcataattaattaaatattataaaaatggcatgttat-aattattaatagaaaatacatgctattattattttaaaaata 19910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37346224 - 37346322
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataat--agaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||  ||||||||||||  || ||||||||||||||    
T  37346224 ttaaatgaaaaaattgctctcataattaattaaatattataaaaatgacatgttattaattataatagagaaaatacatgtgatcattattttaaaaat 37346322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 143 - 291
Target Start/End: Original strand, 10306840 - 10306988
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||||||| |||| ||||||| ||| ||| ||  ||||| ||||||||||| |||||||||| || ||| |||  |||||||||||||||||||| |       
T  10306840 tatactcaagataaaaattacgaaggaaaatcatgatataataggaaaatggtttattttattctctctatttgatgcatcaaacatgagatttatgaat 10306939  T
Q  243 aatatgattaatgtatcatatcctgtctccctatcctgaccatcaaaca 291  Q
    |||||||||||| ||| ||||| | | | ||||| ||||||||||||||    
T  10306940 aatatgattaatatattatatcatattttcctatactgaccatcaaaca 10306988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 52267699 - 52267631
Alignment:
Q  182 gataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgat 250  Q
    |||||||||||||||||||||||| ||||||||| || |||| ||||||| |||||||| |||||||||    
T  52267699 gataggaaaatgatttattttatcatatctctttggtacatcgaacatgaaatttaagtagaatatgat 52267631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 8286608 - 8286661
Alignment:
Q  244 atatgattaatgtatcatatcctgtctccctatcctgaccatcaaacagatcct 297  Q
    ||||||||||| ||||||||| |||||||||||| | | ||||||||| |||||    
T  8286608 atatgattaatatatcatatcttgtctccctatcttaatcatcaaacaaatcct 8286661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 52267985 - 52267891
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||| | |||||| ||||  ||| ||||| ||||||||||||| ||||||| ||||||  |||||  ||||||||  ||| ||||||||||||||    
T  52267985 ttaaataagaaaattactctagtaattaattaaatattttaaaaacggcatgtaattaat--taataacaaatacataatatcattattttaaaaat 52267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 12856915 - 12856996
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaa 226  Q
    ||||||||||||| |||||||| | ||  |||  |||| ||| | |||||||||||||||||| ||| ||||| ||||||||||    
T  12856915 tatactcaggataaaaattacacacaa--gtcaagataagattgaaaaatgatttattttatcatatatctttagtgcatcaaa 12856996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 12255274 - 12255078
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| | ||||||||||| ||||| |||||||||||| |||  ||||||||||  || ||||||||||| |||| | | ||| ||||||||||||    
T  12255274 aaataaggaattatcttctaatcccatcatgataatttttaacccagcctatactcagattagaaattacaaaggaaagacagaataggataggaaaatg 12255175  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     |||||||||||| ||| |||| |||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||||||||||||    
T  12255174 gtttattttatcccatccctttggtgcatcaaacatgagatttaagcaggatatgattaatgtatcatattctgtctccctatcctgaccatcaaac 12255078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 9314970 - 9314804
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||||||||||||||| ||||||||||| |||| ||  |||||||||||||  ||||||||||| |||||| ||||| ||||||||||||    
T  9314970 aaataaggaatgatcttctaatctcaccaggataatttctaattcagcctatactcaggattgaaattacaaaggaaagtcaggataggataggaaaatg 9314871  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcat 261  Q
     |||| |||||||||||  ||| |||||||||||||||||||||||  | ||||||||||||||||||    
T  9314870 gttta-tttatcctatccatttggtgcatcaaacatgagatttaagcaggatatgattaatgtatcat 9314804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 142 - 288
Target Start/End: Complemental strand, 23404602 - 23404456
Alignment:
Q  142 ctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtc 241  Q
    ||||||||| |||||||||||||||| |||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||| ||||| |      
T  23404602 ctatactcaagatataaattacaaaggaaagtcaggatatgatatggaaatggtttattttatcctatctctttggtgcatcaaacatgaaatttatgca 23404503  T
Q  242 gaatatgattaatgtatcatatcctgtctccctatcctgaccatcaa 288  Q
    | |||| |||||||||||||||| ||||||||||||||| |||||||    
T  23404502 ggatattattaatgtatcatatcatgtctccctatcctggccatcaa 23404456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 94 - 294
Target Start/End: Original strand, 10789421 - 10789622
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||| || ||||| |||||| ||||||| ||| |||| |||||||| ||||| ||||||||||| ||| || |||||  ||| |||||||    
T  10789421 aaataaggaatgatattataatcccatcagaataatttataacccaacctatactctggatagaaattacaaaggaaaatcaggataaaataagaaaatg 10789520  T
Q  194 atttatttt-atcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacag 292  Q
     |||||||| ||| ||||||| | |||||||||| |||| |||||||  |||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  10789521 gtttatttttatcttatctctctcgtgcatcaaatatgaaatttaagcagaatatgattaatgtatcatattctgtctctttatcctgaccatcaaacag 10789620  T
Q  293 at 294  Q
    ||    
T  10789621 at 10789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 143 - 290
Target Start/End: Complemental strand, 32329464 - 32329318
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||| |||||||||||||||||||| |||||| ||||| |||| ||||||| ||||||||||| |||| |||| |||||||||||||| |||||||   |    
T  32329464 tatattcaggatataaattacaaaggaaagtcaggataagatatgaaaatggtttattttatcatatc-ctttggtgcatcaaacatgcgatttaaacag 32329366  T
Q  243 aatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  32329365 aatacgattaatgtatcatattctgcctccctatcctgaccatcaaac 32329318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 391151 - 391247
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  391151 ttaaatgaaaaaattgctctcataattaattaaatattataaaaatgacatgttattaattataatagaaaatacatgctataattattttaaaaat 391247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9315103 - 9315007
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  9315103 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatggcattttattaattataatagaaaatacatgctatcattattttaaaaat 9315007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 94 - 301
Target Start/End: Original strand, 29979398 - 29979601
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||| ||||||||   | ||||||| ||| |||  |  ||||||||||| ||||||||||| ||| ||   ||||||||||||||||    
T  29979398 aaataaggaatgatcttttaatctca---gaataatttctaacccagccggtactcaggatagaaattacaaaggaaaatcataatatgataggaaaatg 29979494  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
     ||||||||||| |||| |||| ||||||||||||||||||||||     |||||||||||||||||| | ||||||||| |||||||||||||||| ||    
T  29979495 gtttattttatcatatccctttggtgcatcaaacatgagatttaaacatgatatgattaatgtatcat-ttctgtctcccgatcctgaccatcaaacgga 29979593  T
Q  294 tcctaaag 301  Q
     |||||||    
T  29979594 ccctaaag 29979601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 10789296 - 10789384
Alignment:
Q  9 aaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10789296 aaaaattgctctcataattaattaagtattataaaaatggcatgttattaattataatagaaaatacatgctattattattttaaaaat 10789384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32329636 - 32329540
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||| || ||||||||||||||||||||||||||||||||| || |||||||||||    
T  32329636 ttaaatgaaaaaattgctctcataattaattcaatattgtaaaaacggtatgttattaattataatagaaaatacatgctatcatcattttaaaaat 32329540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 23404782 - 23404686
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||||||||| ||||||  |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  23404782 ttaaatgaaaaaattgctatcataataaattaaatattgtaaaaatggtatgttattaattataatagaaaatacatgctataactattttaaaaat 23404686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12255408 - 12255313
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataat-agaaaatacatgctatgattattttaaaa 95  Q
    ||||||||||||||| ||||||||| ||||| |||||| |||||||| |||||||||||||| ||| | |||||||||||||| ||||||||||||    
T  12255408 ttaaatgaaaaaattactctcataattaattaaatattataaaaatgacatgttattaattacaataaaaaaatacatgctatcattattttaaaa 12255313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 29979291 - 29979361
Alignment:
Q  27 taatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||| ||| || ||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  29979291 taattaaatgttgtaaaaattgcatgttattaattatgatagaaaatacatgctatcattattttaaaaat 29979361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24660659 - 24660755
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||| ||||||||| ||||| |||||| |||||| | ||||| ||||||| |||||  ||||| ||| ||| ||||||||||||||    
T  24660659 ttaaatgaaaaaattactctcataattaattaaatattgtaaaaaagtcatgtaattaattttaataacaaatatatgatatcattattttaaaaat 24660755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 24660840 - 24660937
Alignment:
Q  143 tatactcaggatataaattacaaag-aaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaag 239  Q
    ||||||||||||| ||||||||||| ||||  |  ||||  |||| |||||| |||| |||||| ||||||||| ||| |||||| ||||||||||||    
T  24660840 tatactcaggatacaaattacaaaggaaaaaccaagatagtatagaaaaatggtttaatttatcatatctctttggtgtatcaaatatgagatttaag 24660937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 12267413 - 12267316
Alignment:
Q  192 tgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaa 289  Q
    |||||||||| ||| ||||| ||| ||||||||||||| | ||||||   | |||| |||||| ||| ||||| ||||||| ||| ||||| ||||||    
T  12267413 tgatttatttcatcatatctgtttggtgcatcaaacataaaatttaaacaggatataattaatatataatatcatgtctccatattctgacaatcaaa 12267316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 28457782 - 28457973
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| ||||||||||| || ||| ||| |||     ||||||| ||||||||||| ||||| |||||| ||||| ||||||    
T  28457782 aaataaggaatgatcttctaatcccatcaggataacttctaacccagtct-----caggatagaaattacaaaggaaagttgggataagatagaaaaatg 28457876  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||| |||| |||| ||||||||||||  |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  28457877 gtttattttatcatatcactttggtgcatcaaacacaagatttaagcaggatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 28457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 94 - 272
Target Start/End: Original strand, 21748393 - 21748571
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||  ||||||| |||||| ||||||||||| ||| ||   ||| ||||||||||||    
T  21748393 aaataaggaatggtcttctaatctcatcaggataatttttaacccagcctatacttaggatagaaattacaaaggaaaatcataataggataggaaaatg 21748492  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctcc 272  Q
     || |||||||| ||||  ||| |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  21748493 gttaattttatcatatcattttggtgcatcaaacatgagatttaagcagaatatgattaatgtatcatatcatgtctcc 21748571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 40701024 - 40701220
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||| |||||  ||||||||||||| |||  ||   ||||||||||||| ||||||||||| |||||| |||||||| || ||||||    
T  40701024 aaataaggaatgatcttataatcctatcaggataatttctaacacagcttatactcaggataaaaattacaaaggaaagtcaggatatgacagaaaaatg 40701123  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||| |||   ||| | |||||||||||||||||||||  | |||||||||||||||||||||||||||  ||||||||||||||||||    
T  40701124 gtttattttatcatatacttttggagcatcaaacatgagatttaagcaggatatgattaatgtatcatatcctgtctttctatcctgaccatcaaac 40701220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 123 - 299
Target Start/End: Original strand, 7818444 - 7818619
Alignment:
Q  123 ggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcat 222  Q
    ||||||||| ||| |||||||||| | |||||| ||||||||||| |||||  | ||| ||||| |||||| |||||||||| |||||||||| ||| ||    
T  7818444 ggataatttctaacccaatctatatttaggatagaaattacaaaggaaagttagaataggatagtaaaatg-tttattttattctatctctttagtgtat 7818542  T
Q  223 caaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacagatcctaa 299  Q
    |||||||||||||||||  ||||||||||||||||||||||| | | |||||||| |||||||||||| ||||||||    
T  7818543 caaacatgagatttaagcagaatatgattaatgtatcatatcatatatccctatcttgaccatcaaacggatcctaa 7818619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 33072787 - 33072591
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||| |||||  |||| |||||||| ||| | |  |||||||||||||| ||||||||||| ||| |  ||||||||||||||||||    
T  33072787 aaataaggaatgatcttataatcctatcatgataatttctaacctagcctatactcaggatagaaattacaaaggaaacttaggatatgataggaaaatg 33072688  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||| |||  |||  ||||||||||||||| |||||| | | ||||||||||||||||||||  ||||||||||||||||| |||||||    
T  33072687 gtttattttatcatattccttaggtgcatcaaacatgaaatttaaataggatatgattaatgtatcatattttgtctccctatcctgactatcaaac 33072591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28457649 - 28457745
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  28457649 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatgacatgttagtaattataatagaaaatgcatgctatcattattttaaaaat 28457745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21748273 - 21748373
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatg----ttattaattataatagaaaatacatgctatgattattttaaaaa 96  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||||||||    
T  21748273 ttaaatgaaaaaattgttctcataattaattaaatattttaaaaatggcatgttaattattaattataatagaaaatacatgctatcattattttaaaaa 21748372  T
Q  97 t 97  Q
    |    
T  21748373 t 21748373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40700892 - 40700986
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaa 95  Q
    ||||||||||||||||||||||||| ||||| |||||| |||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  40700892 ttaaatgaaaaaattgctctcataattaattaaatattgtaaatatgacatgttattaattataatagaaaatacatgctatcattaatttaaaa 40700986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 21495165 - 21495052
Alignment:
Q  177 gatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctat 276  Q
    |||||||||| |||||  ||||||||||||||||  ||| ||||||||||||||||||||||   | ||||||||||| ||||||||| |||||||||||    
T  21495165 gatatgatagaaaaatcgtttattttatcctatcaatttggtgcatcaaacatgagatttaacaag-atatgattaatatatcatatcatgtctccctat 21495067  T
Q  277 cctgaccatcaaaca 291  Q
    | ||| |||||||||    
T  21495066 cgtgatcatcaaaca 21495052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 45853152 - 45853303
Alignment:
Q  142 ctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtc 241  Q
    ||||||||| |||| ||||||||| | ||||||   ||| || | ||||||| ||||||||||  ||| ||||| ||||| |||| | ||||||||||      
T  45853152 ctatactcacgataaaaattacaatggaaagtcataataggaaaagaaaatggtttattttattatatatctttggtgcagcaaataagagatttaagaa 45853251  T
Q  242 gaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacagatc 295  Q
    | |||| ||||||||||||||| |||||||||  ||||||||||||||| ||||    
T  45853252 ggatataattaatgtatcatattctgtctccc--tcctgaccatcaaacggatc 45853303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4384899 - 4384995
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||| ||| |||| ||||||||| || || |||||||||||||||| | || |||||||||||||  ||||||||| ||| ||||||||||||||    
T  4384899 ttaaataaaacaattactctcataattatttaaatattttaaaaatggtaggtaattaattataatatcaaatacatgatatcattattttaaaaat 4384995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 41865771 - 41865904
Alignment:
Q  157 aaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgt 256  Q
    ||||||||||   ||||| |||||| ||| |||||||||||||| |||  |||| ||||| || |||||| ||||||||||||  | ||||||| | | |    
T  41865771 aaattacaaaaggaagtcaggatataataagaaaatgatttattatattatatcccttttatgaatcaaatatgagatttaagcgggatatgataatttt 41865870  T
Q  257 atcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||| | ||||||||||||  |||||||||    
T  41865871 atcatatcttatctccctatccttgccatcaaac 41865904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43462849 - 43462913
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataa 65  Q
    |||||||| ||| || ||||| ||| ||||| ||||||||||||||| ||||| |||||||||||    
T  43462849 ttaaatgagaaatttactctcgtaattaattaaatattttaaaaatgacatgtaattaattataa 43462913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 46663259 - 46663175
Alignment:
Q  202 tatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatc 286  Q
    |||||||||| ||| |||||||||| |||||||||||     ||||||| ||||||||||||  ||||||| ||||| |||||||    
T  46663259 tatcctatctgtttggtgcatcaaatatgagatttaaacatgatatgataaatgtatcatatattgtctccttatcccgaccatc 46663175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46663484 - 46663420
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataa 65  Q
    |||||||| ||||||  |||| ||| ||||| ||||||||||||||| ||||| |||||||||||    
T  46663484 ttaaatgagaaaattattctcgtaattaattaaatattttaaaaatgacatgtaattaattataa 46663420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 30271850 - 30271903
Alignment:
Q  244 atatgattaatgtatcatatcctgtctccctatcctgaccatcaaacagatcct 297  Q
    ||||||||||| ||||||||| ||||||  |||||||| ||||||||| |||||    
T  30271850 atatgattaatatatcatatcatgtctctatatcctgatcatcaaacatatcct 30271903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 7e-47; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 94 - 289
Target Start/End: Complemental strand, 34940454 - 34940259
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||| | |||| |||||||| |||||||||||||| |||  ||   ||||||||||||| ||||||||||| |||||| ||||| |||| |||||||    
T  34940454 aaataagaattgattttctaatcccatcaggataatttataaatcagcatatactcaggatagaaattacaaaggaaagtcaggataggatatgaaaatg 34940355  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaa 289  Q
     ||||||||||||||||  ||| ||||||||||||||||||||||   ||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  34940354 gtttattttatcctatccttttggtgcatcaaacatgagatttaaagagaacatgattaatgtattatattctgtctccctatcctgaccatcaaa 34940259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 94 - 287
Target Start/End: Original strand, 45499175 - 45499368
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    |||||| || ||||||||||||| ||||| |||| ||| ||| |||  ||||| |||||||||||||||||||| |||||| ||||| |||||  |||||    
T  45499175 aaataaagaatgatcttctaatcccatcatgatagtttctaacccagcctatattcaggatataaattacaaaggaaagtcaggataggatagagaaatg 45499274  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatca 287  Q
     ||||||||||||||||  ||| |||||||||||||| ||||||||  ||||||||||||| ||||||||| || ||||||||||||| |||||    
T  45499275 gtttattttatcctatcattttggtgcatcaaacatgtgatttaagaagaatatgattaatatatcatatcttgcctccctatcctgatcatca 45499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 290
Target Start/End: Complemental strand, 3767899 - 3767703
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| |||| ||||||||||||| ||||||||| |||  ||   |||||| | ||||||||| |||||| ||||||   ||| |||||  |||||    
T  3767899 aaataaggaatgatattctaatctcatctggataatttataactcagcttatacttatgatataaatgacaaaggaaagtcaaaataagatagagaaatg 3767800  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||  | ||||||||||||||||||||| | |||||||||||||||||||||||    
T  3767799 atttattttatcctatcactttggtgcatcaaacatgaaatttaagcaggatatgattaatgtatcatatcatatctccctatcctgaccatcaaac 3767703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 290
Target Start/End: Original strand, 28115924 - 28116120
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    |||||| || ||||||||||||  |||||||||||||| |||  |||  ||||||||||||| ||||||||||| |||||  ||||| ||||||||||||    
T  28115924 aaataaagaatgatcttctaattccatcaggataatttctaacacaacttatactcaggatagaaattacaaaggaaagttaggataggataggaaaatg 28116023  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
     ||||||||||| |||| |||  |||||||||| ||||||||||||   |||||||||||||||||||||| || ||||||||||| ||||| ||||    
T  28116024 gtttattttatcttatcacttaggtgcatcaaatatgagatttaagcataatatgattaatgtatcatatcatggctccctatcctcaccattaaac 28116120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 94 - 264
Target Start/End: Original strand, 34513752 - 34513922
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||| | |||| |||||||| |||||||||||||| ||| |||   ||||||||||||| ||||||||||| |||||| ||||||||||| ||||||    
T  34513752 aaataagaaatgattttctaatcccatcaggataatttctaacccagcttatactcaggatagaaattacaaaggaaagtcaggatatgatagaaaaatg 34513851  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatc 264  Q
     ||||||||||||||||  ||| |||||||||||||||||||||||  | |||| ||||||||||||||||    
T  34513852 gtttattttatcctatccatttggtgcatcaaacatgagatttaagcaggatataattaatgtatcatatc 34513922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 37910661 - 37910797
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||   |||||||| |||||||||||||||  |||||| ||||||||||||||||||    
T  37910661 aaataaggaatgatcttctaatcccatcaggataatttctaacccagcttatactcatgatataaattacaaacgaaagtcaggatatgataggaaaatg 37910760  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatg 230  Q
    |||||||||||| |||| |||| ||||||||||||||    
T  37910761 atttattttatcgtatccctttggtgcatcaaacatg 37910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3768032 - 3767937
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaa 96  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  3768032 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatggtatgttattgattataatagaaaatacatgctatcattattttaaaaa 3767937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 45499040 - 45499138
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatac--atgctatgattattttaaaaat 97  Q
    |||||||||||| |||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  45499040 ttaaatgaaaaatttgctctcataattaattaaatattgtaaaaatggtatgttattaattataatagaaaatacatatgctatcattattttaaaaat 45499138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34514139 - 34514046
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaa 95  Q
    |||||||||||||||| |||||||  ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  34514139 ttaaatgaaaaaattgatctcatat-taattaaatattgtaaaaatggcatgttattaattataatggaaaatacatgctatcattattttaaaa 34514046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28115791 - 28115887
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||| |||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  28115791 ttaaatgaaaaacttgctctcataattaattaaatattgtaaaaatgacatgttattaattataatagaaaatgcatgctatcataatttaaaaaat 28115887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34940587 - 34940491
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    |||||||||||||||| |||||| | ||||| |||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  34940587 ttaaatgaaaaaattgttctcatcattaattaaatattgtaaaaatgacatgttattaattataacagaaaatacatgttatcattattttaaaaat 34940491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 5787169 - 5787262
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||  ||||||   |||||||||||||||||||||||| ||||||||||||||    
T  5787169 ttaaatgaaaaaattgctctcataattaattaaatattgtaaaaatgatatgtta---attataatagaaaatacatgctatcattattttaaaaat 5787262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 203 - 293
Target Start/End: Original strand, 21342155 - 21342245
Alignment:
Q  203 atcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
    ||||||||  |||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  21342155 atcctatccattttgtgcatcaaacatgagatttaagcaggatatgattaatgtatcatatcctgtctctctatcttggccatcaaacaga 21342245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37910530 - 37910625
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||| ||||||  ||||| ||||| |||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37910530 ttaaatgaaaatattgcttccataattaattaaatattgtaaaa-tgacatgttattaattataatagaaaatacatgctatcattattttaaaaat 37910625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 106 - 239
Target Start/End: Complemental strand, 17702279 - 17702146
Alignment:
Q  106 atcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatc 205  Q
    ||||||||||   ||||||||| ||| |||  |||| ||||||||||||| ||||||||||| |||| |  |||| |||| |||||   |||||||||||    
T  17702279 atcttctaattctatcaggatagtttctaactcaatttatactcaggataaaaattacaaaggaaagacaagataggataagaaaacagtttattttatc 17702180  T
Q  206 ctatctcttttgtgcatcaaacatgagatttaag 239  Q
     ||||||||| |||||||||||||||||||||||    
T  17702179 ttatctctttggtgcatcaaacatgagatttaag 17702146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 36198689 - 36198762
Alignment:
Q  9 aaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctat 82  Q
    ||||||||||||||||| ||||| |||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  36198689 aaaaattgctctcataattaattaaatattgtaaaaatgctatgttattaattataatagaaaatacatgctat 36198762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 37911176 - 37911247
Alignment:
Q  219 gcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||||||||||||| ||| | ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37911176 gcatcaaacatgagatttcagtaggatatggttaatgtatcatatcccgtctccctatcctgaccatcaaac 37911247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 53923731 - 53923640
Alignment:
Q  202 tatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||  | ||||| |||||||| ||| |||||||    
T  53923731 tatcctatctctttggtgcatcaaacatgataattaagtcgaatatgattaatatatcatattttatctccttatcctgatcataaaacaga 53923640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 54103379 - 54103491
Alignment:
Q  122 aggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgca 221  Q
    |||||||||| ||||||||  |||| | |||||| |||||| ||||| ||||| | |||||||||||||| | ||||||||||||||||||||| | ||     
T  54103379 aggataatttataatccaacatataatgaggataaaaattataaagataagtcagaatatgataggaaaacggtttattttatcctatctctttggagcg 54103478  T
Q  222 tcaaacatgagat 234  Q
    ||||||| |||||    
T  54103479 tcaaacacgagat 54103491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 53923879 - 53923729
Alignment:
Q  97 taaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatt 196  Q
    |||||| ||||||||| ||   || |||||| ||| ||| || ||||||| || ||| | |||||||||||||||  |  |||||||| || ||||  ||    
T  53923879 taaggaatgatcttcttatgctattaggatagtttctaacccgatctatattcgggacaaaaattacaaagaaaaaccaagatatgatggggaaatagtt 53923780  T
Q  197 tattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatat 247  Q
    ||||||||||||||||||| ||||||| ||||||| | |||||||||||||    
T  53923779 tattttatcctatctctttggtgcatcgaacatgataattaagtcgaatat 53923729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 31309633 - 31309676
Alignment:
Q  250 ttaatgtatcatatcctgtctccctatcctgaccatcaaacaga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31309633 ttaatgtatcatatcctgtctccctatcctgaccatcaaacaga 31309676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 3319782 - 3319677
Alignment:
Q  177 gatatgataggaaaatgatttattttatcctatctcttttgtgc--atcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccct 274  Q
    |||||||||||| |||||||||||||||||||||| | | || |  ||||||||| ||||||||||  | |||||| ||| ||||||||||| |||| ||    
T  3319782 gatatgataggagaatgatttattttatcctatctttgtggtacatatcaaacataagatttaagttaattatgataaatatatcatatcct-tctctct 3319684  T
Q  275 atcctga 281  Q
    |||||||    
T  3319683 atcctga 3319677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 5787299 - 5787410
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||| ||||| |||||||||||||| |||  ||   |||||||   ||| ||||||||||| ||| ||  |||| ||||||||||||    
T  5787299 aaataaggaatgatcttttaatcccatcaggataatttctaactcagcatatactcgacatagaaattacaaaggaaaatcatgataggataggaaaatg 5787398  T
Q  194 atttattttatc 205  Q
    ||||||||||||    
T  5787399 atttattttatc 5787410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 44290176 - 44290246
Alignment:
Q  104 tgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtc 174  Q
    ||||||||||||||||| ||||||| || |||  ||  |||||||||||||||||||||||||| ||||||    
T  44290176 tgatcttctaatctcattaggataacttctaactcagcctatactcaggatataaattacaaaggaaagtc 44290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 44290088 - 44290129
Alignment:
Q  56 ttaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  44290088 ttaattataatagaaaatacatgctatcattattttaaaaat 44290129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 3692637 - 3692733
Alignment:
Q  188 aaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgacca 284  Q
    |||| |||||||| |||| |||||||||  |||||||||||||||||||||||   ||||||  ||| ||||||||  ||||||| |||||| ||||    
T  3692637 aaaaagatttattgtatcttatctctttgatgcatcaaacatgagatttaagtatgatatgaacaatatatcatattttgtctccttatcctaacca 3692733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 44289502 - 44289558
Alignment:
Q  8 aaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattata 64  Q
    |||||| ||||||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  44289502 aaaaaaatgctctcataattaattaaatattgtaaaaatgacatgttattaattata 44289558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 153 - 300
Target Start/End: Original strand, 15673010 - 15673159
Alignment:
Q  153 atataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg--aatatgat 250  Q
    ||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |   |||||||    
T  15673010 atataaattgcaaaggaaagtcaggatatgataggaaaatggtttattttatcctatctctttggtgcatcaaacatgagatttaagcaggatatatgat 15673109  T
Q  251 taatgtatcatatcctgtctccctatcctgaccatcaaacagatcctaaa 300  Q
    ||||||||||||||||| ||||||||| ||||||||||||| | ||||||    
T  15673110 taatgtatcatatcctgcctccctatcttgaccatcaaacataccctaaa 15673159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 34703198 - 34703029
Alignment:
Q  94 aaataaggagtgatcttctaatctcatcaggataatttttaatccaatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatg 193  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||| |||| |||| |||| |||||||||||||||| |||||| |||||||||||||||||     
T  34703198 aaataaggaatgatcttctaatcccatcaggatagtttctaacccaacctatcctcatgatataaattacaaaggaaagtcaggatatgataggaaaata 34703099  T
Q  194 atttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatat 263  Q
     ||||||||||| |||   ||| |||||||||||||| ||||||||  | ||||||||||||||||||||    
T  34703098 gtttattttatcatatacttttggtgcatcaaacatgtgatttaagcaggatatgattaatgtatcatat 34703029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 290
Target Start/End: Original strand, 18503076 - 18503273
Alignment:
Q  95 aataaggagtgatcttctaatctcatcaggataatttttaatcca--atctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaat 192  Q
    ||||| || ||||||||||||| |||||| ||||||| |||  ||   | |||||||| |||| ||||||||||  ||| || ||||| |||||||||||    
T  18503076 aataaagaatgatcttctaatcccatcagcataatttctaacacagcctatatactcaagatagaaattacaaatgaaaatcaggataggataggaaaat 18503175  T
Q  193 gatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    | ||||||||||||||||||||| ||||||||||||||| |||||||  | ||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  18503176 ggtttattttatcctatctctttggtgcatcaaacatgatatttaagcaggatatgattaatgtatcatatccgatctctctatcatgaccatcaaac 18503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34866309 - 34866407
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaataa 99  Q
    |||||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  34866309 ttaaattaaaaaattgctctcataattaattaaatattataaaaatggcatgttattaattataatagaaaatacatgcaatcattattttaaaaataa 34866407  T

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Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 15672839 - 15672926
Alignment:
Q  12 aattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaataa 99  Q
    |||||||||||||| ||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15672839 aattgctctcataattaattaaatattgtaaaaatgatatgttattaattataatagaaaatacatgctatcattattttaaaaataa 15672926  T

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Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 290
Target Start/End: Complemental strand, 25102754 - 25102601
Alignment:
Q  142 ctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtc 241  Q
    |||||||||||||| ||||||||||   || ||  |||| |||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||     
T  25102754 ctatactcaggataaaaattacaaaagtaattcacgataggatacgaaaataatttattttatcctatctatttggtgcatcaaacatgagatttaagta 25102655  T
Q  242 gaatatgattaat-----gtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||| |||| |||      ||||||||| ||||||||||||| |||||||||||    
T  25102654 gaatgtgataaatatatcatatcatatcatgtctccctatcccgaccatcaaac 25102601  T

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Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 283
Target Start/End: Complemental strand, 6110255 - 6110119
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    ||||||||||||||||||||||||| |||||   |||| ||||| |||||||||||||||||| |||| ||||  |||||||||||||||||||||        
T  6110255 tatactcaggatataaattacaaaggaaagttaagataggatagaaaaatgatttattttatcttatccctttgatgcatcaaacatgagatttaa---- 6110160  T
Q  243 aatatgattaatgtatcatatcctgtctccctatcctgacc 283  Q
     ||||||||||||||||| ||| |||||  || ||||||||    
T  6110159 tatatgattaatgtatcaaatcatgtctttctgtcctgacc 6110119  T

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Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34703334 - 34703236
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatac--atgctatgattattttaaaaat 97  Q
    ||||||||||||||||||||||||| ||||  |||||| ||||||||| ||| ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  34703334 ttaaatgaaaaaattgctctcataattaatgaaatattgtaaaaatggtatgctattaattataatagaaaatacatatgctatcattattttaaaaat 34703236  T

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Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18502939 - 18503038
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaa---tattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaaat 97  Q
    ||||||||||||| |  |||||||| ||||| ||   |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18502939 ttaaatgaaaaaaattatctcataattaattaaaaaatattgtaaaaatggcatgttattaattataatagaaaatacatgctatcattattttaaaaat 18503038  T

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Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3480610 - 3480704
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaatacatgctatgattattttaaaa 95  Q
    ||||||||||||| | ||||||||| | ||| ||||||||||||||| ||||| |||||||||||||  ||||||||| ||  ||||||||||||    
T  3480610 ttaaatgaaaaaagtactctcataattgattaaatattttaaaaatgacatgtaattaattataataacaaatacatgataccattattttaaaa 3480704  T

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Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 15524503 - 15524378
Alignment:
Q  138 caatctatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagattta 237  Q
    ||||||||| ||  |||| ||||||||||  || |||||||||||||| ||||||||||| ||||||| ||||| |||  ||| ||||| ||||||||||    
T  15524503 caatctatattcgagatacaaattacaaatgaatgtcgggatatgataagaaaatgattttttttatcatatctttttgttgcctcaaaaatgagattta 15524404  T
Q  238 agtcgaatatgattaatgtatcatat 263  Q
    ||    ||||||| ||||||||||||    
T  15524403 agcatgatatgataaatgtatcatat 15524378  T

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Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 32585810 - 32585943
Alignment:
Q  157 aaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgt 256  Q
    |||||||||||| | ||| | ||| ||||||||||| |||||||||||| ||||  |||  |||||||||||||||||||||   | ||||||||  |||    
T  32585810 aaattacaaagacatgtcagaataagataggaaaattatttattttatcatatcattttgttgcatcaaacatgagatttaaacaggatatgattcttgt 32585909  T
Q  257 atcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||  || ||||||||| || |||||||||    
T  32585910 atcatattttgcctccctatcgtggccatcaaac 32585943  T

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Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 6110385 - 6110322
Alignment:
Q  11 aaattgctctcataactaatttaatattttaaaaatggcatgttattaattataatagaaaata 74  Q
    ||||||||||||||| ||||| |||||| |||||||   |||||||||||||||||||||||||    
T  6110385 aaattgctctcataattaattaaatattgtaaaaataatatgttattaattataatagaaaata 6110322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 34183185 - 34183102
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaa 226  Q
    ||||||| ||||| |||||| ||||  ||||| ||||| ||||| |||||  ||||||||||||||||||||| ||||||||||    
T  34183185 tatactccggataaaaattataaaggcaagtcaggataggatagaaaaatagtttattttatcctatctctttagtgcatcaaa 34183102  T

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Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 34203774 - 34203691
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaa 226  Q
    ||||||| ||||| |||||| ||||  ||||| ||||| ||||| |||||  ||||||||||||||||||||| ||||||||||    
T  34203774 tatactccggataaaaattataaaggcaagtcaggataggatagaaaaatagtttattttatcctatctctttagtgcatcaaa 34203691  T

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Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 28429046 - 28428961
Alignment:
Q  153 atataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaa 238  Q
    |||||||||||||||| ||||  ||||| |||   ||||| |||||||||||||||| ||||| |||||| |||||| ||||||||    
T  28429046 atataaattacaaagataagttaggataagattacaaaataatttattttatcctatttctttggtgcattaaacataagatttaa 28428961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 24429348 - 24429444
Alignment:
Q  195 tttattttatcctatctcttttgtgcatcaaacatgagatttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaaca 291  Q
    |||||||||||||||| |||| |||||||||||||| |||||||   | |||||||  || | ||||||| |  ||| |||||||||||||||||||    
T  24429348 tttattttatcctatccctttagtgcatcaaacatgtgatttaaacaggatatgatagatatgtcatatcttaactctctatcctgaccatcaaaca 24429444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 31804843 - 31804939
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttatttta-tcctatctcttttgtgcatcaaacatgagatttaa 238  Q
    |||||||| |||| |||||| ||||| || || ||||| |||| ||||||| ||||||||| || ||||| |  |||||||||||||||||||||||    
T  31804843 tatactcaagataaaaattataaagacaattcaggataggataagaaaatggtttattttaatcttatctatcgtgtgcatcaaacatgagatttaa 31804939  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34183348 - 34183284
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataa 65  Q
    ||||| || |||||| ||||| ||  ||||| ||||||||||| ||||||||| |||||||||||    
T  34183348 ttaaacgagaaaattactctcgtagttaattaaatattttaaatatggcatgtaattaattataa 34183284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34203937 - 34203873
Alignment:
Q  1 ttaaatgaaaaaattgctctcataactaatttaatattttaaaaatggcatgttattaattataa 65  Q
    ||||| || |||||| ||||| ||  ||||| ||||||||||| ||||||||| |||||||||||    
T  34203937 ttaaacgagaaaattactctcgtagttaattaaatattttaaatatggcatgtaattaattataa 34203873  T

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Target: scaffold0817 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 4 - 61
Alignment:
Q  233 atttaagtcgaatatgattaatgtatcatatcctgtctccctatcctgaccatcaaac 290  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  4 atttaagcagaatatgattaatgtatcatatcatgtctccctatcctggccatcaaac 61  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 1770 - 1659
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||| ||| |||| ||||||||||   ||||  ||||| ||||| |||||||||||||| ||||||||||||| ||||| ||||||| |||||||| |      
T  1770 tatagtcatgataaaaattacaaaaccaagttaggataagatagaaaaatgatttatttcatcctatctctttggtgcaccaaacataagatttaaataa 1671  T
Q  243 aatatgattaat 254  Q
     |||||||||||    
T  1670 gatatgattaat 1659  T

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Target: scaffold0702 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 4021 - 4127
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||||| | |||| |||||||||||| ||||  ||||| |||||| ||||  |||||||||||| | |||||| ||||||||||||||| ||||||| ||    
T  4021 tatacttaagataaaaattacaaagataagttaggataagataggtaaatagtttattttatcc-acctctttggtgcatcaaacatgatatttaagccg 4119  T
Q  243 aatatgat 250  Q
     |||||||    
T  4120 gatatgat 4127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 4081 - 3975
Alignment:
Q  143 tatactcaggatataaattacaaagaaaagtcgggatatgataggaaaatgatttattttatcctatctcttttgtgcatcaaacatgagatttaagtcg 242  Q
    |||||| | |||| |||||||||||| ||||  ||||| |||||| ||||  |||||||||||| | |||||| ||||||||||||||| ||||||| ||    
T  4081 tatacttaagataaaaattacaaagataagttaggataagataggtaaatagtttattttatcc-acctctttggtgcatcaaacatgatatttaagccg 3983  T
Q  243 aatatgat 250  Q
     |||||||    
T  3982 gatatgat 3975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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