View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7145_low_7 (Length: 372)
Name: NF7145_low_7
Description: NF7145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7145_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 366
Target Start/End: Original strand, 34113996 - 34114361
Alignment:
| Q |
1 |
tatatcctatgtcatgtgtttgcaatttggtggattaaccctttgatttgagctgtatcaaagtggttaacttaagtatcttttatacttcttttaatga |
100 |
Q |
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| T |
34113996 |
tatatcctatgtcatgtgtttgcaatttggtggattaaccctttgatttgagctgtatcaacgtggttaacttaagtatcttttatacttcttttaatga |
34114095 |
T |
|
| Q |
101 |
atactttgattataaaataataataatttcgcattatattatcaaatactccatatattttgttgaatataatatgtacgtttccatatactacttttta |
200 |
Q |
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| T |
34114096 |
atactttgattataaaataataataattttgcattatattatcaaatactccatatattttgttgaatataatatgtacgttttcatatactacttttta |
34114195 |
T |
|
| Q |
201 |
ccctgaatgaactcgatgtcactttcgaaaaaggtaaggaagagcgtacaaagacaaaaatatcaattgacatcccaccaatagctttgctagaaatgat |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
34114196 |
ccctgaatgaactcgatgtcactttcgaaaaaggtaaggaagagcgtacaaagacaaaaatatcaattgacatcccaccaatagctttgctcgaaatgat |
34114295 |
T |
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| Q |
301 |
caaagtcatcattaggtacattatattaataatacatgtgatatactacttcattagaataatata |
366 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34114296 |
caaagtcatcattaggtacattatattaataatacatgtgatatactacttcattagaataatata |
34114361 |
T |
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