View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7146_low_9 (Length: 301)
Name: NF7146_low_9
Description: NF7146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7146_low_9 |
 | |
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| [»] chr7 (14 HSPs) |
| |
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| [»] chr8 (10 HSPs) |
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| [»] chr4 (8 HSPs) |
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| [»] scaffold0034 (1 HSPs) |
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| [»] chr2 (11 HSPs) |
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| [»] scaffold0364 (1 HSPs) |
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| [»] chr5 (4 HSPs) |
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| [»] scaffold0371 (1 HSPs) |
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| [»] scaffold0149 (1 HSPs) |
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| [»] scaffold0090 (1 HSPs) |
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| [»] scaffold0388 (1 HSPs) |
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| [»] scaffold0117 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0485 (1 HSPs) |
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| [»] scaffold0556 (1 HSPs) |
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| [»] scaffold0500 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0381 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0069 (2 HSPs) |
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| [»] scaffold0011 (1 HSPs) |
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| [»] scaffold0860 (1 HSPs) |
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| [»] scaffold0420 (1 HSPs) |
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| [»] scaffold0322 (1 HSPs) |
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| [»] scaffold0126 (1 HSPs) |
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| [»] scaffold0106 (1 HSPs) |
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| [»] scaffold0335 (1 HSPs) |
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| [»] scaffold0089 (1 HSPs) |
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| [»] scaffold0609 (1 HSPs) |
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| [»] scaffold0585 (1 HSPs) |
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| [»] scaffold0635 (1 HSPs) |
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| [»] scaffold0395 (1 HSPs) |
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| [»] scaffold0057 (1 HSPs) |
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| [»] scaffold0672 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 97 - 301
Target Start/End: Complemental strand, 13849784 - 13849580
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13849784 |
tgcatatttaaatatgccttacacctcaacatggtcaactcgtgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
13849685 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
13849684 |
ttatgcataaatcagcattcaacaatcaatcatattcaaatcaacagctctagtaaaataacataatttatcataattatttgttctacccaaagaatcc |
13849585 |
T |
|
| Q |
297 |
aaccc |
301 |
Q |
| |
|
||||| |
|
|
| T |
13849584 |
aaccc |
13849580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 16573419 - 16573622
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16573419 |
tgcatatttaaatatgtcttacacctcaacatggtcaactcgtgacgcaacaacttttgacaatggaatccaacaacttgtatattctatttatatgcaa |
16573518 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||| ||||| |||| || |||||||||||| |||||||| |||||| ||| |||||||||||||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
16573519 |
ttacgcatagatcaacattcaacaatcaattatattcaagtcaacaactctagtaaaataacataatttatcataattatttgttctacccaaagaatcc |
16573618 |
T |
|
| Q |
297 |
aacc |
300 |
Q |
| |
|
|||| |
|
|
| T |
16573619 |
aacc |
16573622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 16592243 - 16592040
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16592243 |
tgcatatttaaatatgtcttacacctcaacatggtcaactcgtgacgcaacaacttttgacaatggaatccaacaacttgtatattctatttatatgcaa |
16592144 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||| ||||| |||| || |||||||||||| |||||||| |||||| ||| |||||||||||||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
16592143 |
ttacgcatagatcaacattcaacaatcaattatattcaagtcaacaactctagtaaaataacataatttatcataattatttgttctacccaaagaatcc |
16592044 |
T |
|
| Q |
297 |
aacc |
300 |
Q |
| |
|
|||| |
|
|
| T |
16592043 |
aacc |
16592040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 97 - 287
Target Start/End: Complemental strand, 7507399 - 7507208
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| | ||||||| ||||||||||||||| || ||| | ||||| ||| ||||||||||||| |
|
|
| T |
7507399 |
tgcatatttaaatatgacttacacctcaacatgatcaacttgtgacacaaaaacttttgacaatggcattcaatactttgtacattttatttaaatgcaa |
7507300 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctaccc |
287 |
Q |
| |
|
||| ||| ||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7507299 |
ttacacatgaatcaacaatcaacaatccatcatattcaaatcaacagctctggtaaaaataacataattaatcataattatttattctaccc |
7507208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 7529303 - 7529485
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| |||||| ||||||||||||||| || |||||||||| || ||||||||||| |||||||||||||| | |||||| |||||| |
|
|
| T |
7529303 |
tgcatatataaatatgatttacacatcaacatggtcaactagcaacacaacaaccttcgacaatggaattcaacaacttgtataatttatttacatgcaa |
7529402 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattta |
279 |
Q |
| |
|
|||| |||||||| ||||||||||||| | |||||||||||| || ||| | |||||||| ||||||||||| ||||||||| |
|
|
| T |
7529403 |
ttatacataaatccacaatcaacaatcatttatattcaaatcagcaactctgataaaataatataattaatcagaattattta |
7529485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 15725649 - 15725824
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg--acaatggaatccaacaacttgtatattctatttaaatgc |
194 |
Q |
| |
|
||||||||||||||| ||||||| ||||||| |||| || | |||||||||||||||| |||||| || ||||||||| |||| | ||||||||| |
|
|
| T |
15725649 |
tgcatatttaaatatgacttacacttcaacattgtcatcttgtgacacaacaacttttgttacaatgacattcaacaacttttataatttatttaaatat |
15725748 |
T |
|
| Q |
195 |
aattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
269 |
Q |
| |
|
||| || |||| | || ||||||| |||||| |||| ||||||||||| ||| |||| ||| |||||||||||||| |
|
|
| T |
15725749 |
aatcatacatagaacaacaatcaataatcaaccataatcaaatcaacaactctggtagaaacaacataattaatca |
15725824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 39995714 - 39995572
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||| || ||||||||||| || |||||| ||| |||||||||||||| | |||||| || ||| |
|
|
| T |
39995714 |
tgcatatataaatatgacttacacatcaacatggtcgaccaatgacacaacaaccttcgacaatataattcaacaacttgtataatttatttacatacaa |
39995615 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatca |
239 |
Q |
| |
|
||| |||||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
39995614 |
atatacataaatccacaatcaataatcattcatattcaaatca |
39995572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 15690186 - 15690303
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||||| |||||||||| |
|
|
| T |
15690186 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataa |
15690283 |
T |
|
| Q |
258 |
cataattaatcataattatt |
277 |
Q |
| |
|
|| |||||||||||| |||| |
|
|
| T |
15690284 |
cacaattaatcataactatt |
15690303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 15697779 - 15697896
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||||| |||||||||| |
|
|
| T |
15697779 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataa |
15697876 |
T |
|
| Q |
258 |
cataattaatcataattatt |
277 |
Q |
| |
|
|| |||||||||||| |||| |
|
|
| T |
15697877 |
cacaattaatcataactatt |
15697896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 15731706 - 15731648
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
155 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
15731706 |
tgcatatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
15731648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 35366213 - 35366289
Alignment:
| Q |
166 |
ccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagc |
244 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||| ||||||| ||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
35366213 |
ccaacaccttgtatattctaattgaatgcaattaagcataaaccagcaatcatcaa-caatcatattc-aatcaacagc |
35366289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 42041592 - 42041711
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || ||||||| | | |||||||||||||| | | |||||||| || |
|
|
| T |
42041592 |
tgcatatatgaatatgacttactcatcaacatggtcaactat-gacacaacaaccttcgacaatgaatttcaacaacttgtataatttgtttaaatgtaa |
42041690 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatca |
217 |
Q |
| |
|
|||| ||||||||| |||||| |
|
|
| T |
42041691 |
ttatacataaatcaacaatca |
42041711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 15731650 - 15731595
Alignment:
| Q |
174 |
ttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
||||| ||||||||||||| |||| || ||||| ||| |||||||||||||||||| |
|
|
| T |
15731650 |
ttgtacattctatttaaatacaatcatacataattcaacaatcaacaatcaatcat |
15731595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 41782938 - 41782876
Alignment:
| Q |
167 |
caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
|||||||||||||| | | |||||||| |||||| ||||||||| |||||||| |||| |||| |
|
|
| T |
41782938 |
caacaacttgtataatttgtttaaatgaaattatacataaatcaacaatcaaccatcattcat |
41782876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 161; Significance: 7e-86; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 97 - 301
Target Start/End: Original strand, 43112203 - 43112407
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
43112203 |
tgcatatttaaatatgtcttacacctcaacatggttaactcgtgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgaaa |
43112302 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| || |||||||| |
|
|
| T |
43112303 |
ttatgcataaatcagcattcaacaatcaatcatattcaaatcaacagctctagtaaaataacataatttatcataattatttgttctatccaaagaatcc |
43112402 |
T |
|
| Q |
297 |
aaccc |
301 |
Q |
| |
|
||||| |
|
|
| T |
43112403 |
aaccc |
43112407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 97 - 281
Target Start/End: Original strand, 20385383 - 20385567
Alignment:
| Q |
97 |
tgcatatttaaa-tatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaactt-gtatattctatttaaatgc |
194 |
Q |
| |
|
|||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||| |||| ||||| |
|
|
| T |
20385383 |
tgcatatttaaaatatgacttacacctcaatgtggtcaactcgtgacacaacaactttcgacaatggaattcaacaactttgtatattttatt--aatgc |
20385480 |
T |
|
| Q |
195 |
aattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttatt |
281 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
20385481 |
aattatacataaatcaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaataacataattaatcataattatttatt |
20385567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 99 - 287
Target Start/End: Complemental strand, 22434499 - 22434317
Alignment:
| Q |
99 |
catatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaatt |
198 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||| |
|
|
| T |
22434499 |
catatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttgacaatggcattcaacaacttgtatattttatttaaatgtaatt |
22434400 |
T |
|
| Q |
199 |
atgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctaccc |
287 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22434399 |
atacata-------aatcaacaatcaatcatattcaaatcaacagctctagtaaaaatagcataattaatcataattatttattctaccc |
22434317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 300
Target Start/End: Complemental strand, 15003961 - 15003775
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||||||| |||| |||| || || ||| | |||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
15003961 |
cttacacctcaacattgtcaatttgtgacacaacaacctttgtacaacggtattcaaaatcttgtataatttatttaaatataaatatacatcaaacaac |
15003862 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatccaacc |
300 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |||| | |||| || ||||||||||| |
|
|
| T |
15003861 |
aaacaacaatcaatcatattcaactcaacagctttggtaaaatagcataattaatcataatcatttgtcctacacg-agaatccaacc |
15003775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 278
Target Start/End: Original strand, 15267399 - 15267555
Alignment:
| Q |
120 |
cctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaac |
219 |
Q |
| |
|
||||||||| ||||||| || |||||||| ||||| |||| ||| |||||||||||||| | ||||||||| || ||| ||||| ||||||||||| |
|
|
| T |
15267399 |
cctcaacatagtcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaac |
15267496 |
T |
|
| Q |
220 |
aatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
||| |||||| | || |||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
15267497 |
aattcatcatacttaattcaacagctccggtaaaataacacaattaatcataactattt |
15267555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 114 - 278
Target Start/End: Complemental strand, 22521768 - 22521607
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagca |
213 |
Q |
| |
|
||||||||||||||| ||||||| || |||||||| ||| | |||| ||| |||||||||||||| | ||||||||| |||||| ||||| ||||| |
|
|
| T |
22521768 |
cttacacctcaacatagtcaactaatgatacaacaacctttaaaaatgaaattcaacaacttgtataatttatttaaatataattatacataa--cagca |
22521671 |
T |
|
| Q |
214 |
atcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
||||||||| |||||| | || |||| ||||| ||| ||||||||||||||||||||| ||||| |
|
|
| T |
22521670 |
atcaacaattcatcatacttaattcaatagctccggt-aaataacataattaatcataactattt |
22521607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 19989376 - 19989456
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
220 |
Q |
| |
|
||||||||||| || ||||||| |||||||||| ||||||| | ||||||| || |||||| || || ||| ||||||||| |
|
|
| T |
19989376 |
gacacaacaaccttcgacaatgaaatccaacaatttgtataatttatttaagtgtaattatacacaattcaacaatcaaca |
19989456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 7301206 - 7301132
Alignment:
| Q |
168 |
aacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaaca |
242 |
Q |
| |
|
|||| |||||||| |||| || |||||| ||||||||||| || ||||||||| |||||||||||| |||||| |
|
|
| T |
7301206 |
aacatcttgtataatctaattgaatgcatttatgcataaaccaacaatcaacagcaaatcatattcaattcaaca |
7301132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 21861399 - 21861322
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
217 |
Q |
| |
|
||||||||||| || ||||||| | |||||||||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
21861399 |
gacacaacaaccttcgacaatgaattccaacaacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
21861322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 38185855 - 38185778
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
217 |
Q |
| |
|
||||||||||| |||||||||| | |||||| ||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
38185855 |
gacacaacaacctttgacaatgaattccaaccacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
38185778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 28204602 - 28204400
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
28204602 |
tgcatatttaaatatgtcttacacctcaacatggttaactcgtgacacgacgacttttgacaatggaatccaacaacttgtatattctaattaaacgcaa |
28204503 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
28204502 |
ctatgcataaatcagcaatcaacaatcaat-atattcaaatcaacagctctgataaaataacataatttatcacaattatttattctacccgaagaatcc |
28204404 |
T |
|
| Q |
297 |
aacc |
300 |
Q |
| |
|
|||| |
|
|
| T |
28204403 |
aacc |
28204400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 300
Target Start/End: Original strand, 20901325 - 20901511
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| |||| | | ||||||||||| |||| | ||||| || ||| |||||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
20901325 |
cttacacctcaacattatcaatttgtgacacaacaacctttgtataatggtattcaaaaacttgtataatttatttaaatataaatatacatcaaacaac |
20901424 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatccaacc |
300 |
Q |
| |
|
|||||||||||| ||||||| | ||| |||||| ||||||||| |||||||||| |||||||||| | |||| || ||||||||||| |
|
|
| T |
20901425 |
aatcaacaatcagtcatatttgactcagcagctctggtaaaatagcataattaattataattatttgtcctacacg-agaatccaacc |
20901511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 21118090 - 21117996
Alignment:
| Q |
122 |
tcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
217 |
Q |
| |
|
||||||||||||||| ||||||||||| || ||||||| ||| |||||||||||||| | | ||||||||||||||| ||||||||| |||||| |
|
|
| T |
21118090 |
tcaacatggtcaactat-gacacaacaaccttggacaatgaaattcaacaacttgtataatttgtttaaatgcaattatacataaatcaacaatca |
21117996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 24960251 - 24960313
Alignment:
| Q |
167 |
caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
|||||||||||||| | | ||||| || |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
24960251 |
caacaacttgtataatttgtttaagtgtaattatacataaatcaacaatcaacaatcattcat |
24960313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 97 - 301
Target Start/End: Complemental strand, 33662447 - 33662244
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33662447 |
tgcatatttaaatatgtcttacacctcaacatggttaactcgtgacacgacgacttttgacaatggaatccaacaacttgtatattctaattaaatgcaa |
33662348 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
33662347 |
ctatgcataaatcagcaatcaacaatcaat-atattcgaatcaacagctctgataaaataacataatttatcacaattatttattctacccaaagaatcc |
33662249 |
T |
|
| Q |
297 |
aaccc |
301 |
Q |
| |
|
||||| |
|
|
| T |
33662248 |
aaccc |
33662244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 97 - 269
Target Start/End: Complemental strand, 16371598 - 16371426
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||||||| | |||||||||| || ||||||||||| |||||||||||||| | |||||| |||| | |
|
|
| T |
16371598 |
tgcatatataaatatgacttacacatcaacatggtcaactagtaacacaacaaccttcgacaatggaattcaacaacttgtataatttatttacatgcga |
16371499 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
269 |
Q |
| |
|
|||| ||||||| ||||||| ||||| | |||||||||||| || ||| | |||||||| ||||||||||| |
|
|
| T |
16371498 |
ttatacataaattcacaatcaataatcatttatattcaaatcagcaactctgataaaataatataattaatca |
16371426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 269
Target Start/End: Complemental strand, 15416754 - 15416582
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||||||| ||||||||||| || |||| |||||| ||||||||||||| | |||||| |||||| |
|
|
| T |
15416754 |
tgcatatataaatatgacttacacatcaacatggtcaactaatgacacaacaaccttcgacattggaatttaacaacttgtataatttatttacatgcaa |
15416655 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
269 |
Q |
| |
|
|||| || |||| ||||||||||||| |||||||||||||| || ||| |||||||| ||||||||||| |
|
|
| T |
15416654 |
ttatacaataatccacaatcaacaatcattcatattcaaatcagcaactctaataaaataatataattaatca |
15416582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 278
Target Start/End: Original strand, 13881600 - 13881763
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||||||| |||| ||||||| || ||| |||||||||| | ||||||||| | ||| ||| || || | |
|
|
| T |
13881600 |
cttacacctcaacattgtcaatttgtgacacaacaacctttgtacaatggtattcaaaaacttgtataatttatttaaatata--tatacatcaaacaac |
13881697 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
||||| ||||||||||||||||| || |||||| ||||||||| |||||||| ||||| |||||| |
|
|
| T |
13881698 |
aatcagcaatcaatcatattcaactctgcagctctggtaaaatagcataattattcatagttattt |
13881763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 278
Target Start/End: Original strand, 13877972 - 13878137
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| |||| | | ||||||||||| |||| ||||||| | ||| |||||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
13877972 |
cttacacctcaacattgtcagtttgtgacacaacaacctttgtacaatggttttcaaaaacttgtataatttatttaaatataaatatacatcaaacaac |
13878071 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
||||| |||| |||||||||||| || ||||| ||||||||| |||||||| ||||| |||||| |
|
|
| T |
13878072 |
aatcagcaattaatcatattcaactctgcagctatggtaaaatagcataattattcatagttattt |
13878137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 27849333 - 27849267
Alignment:
| Q |
167 |
caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattc |
233 |
Q |
| |
|
|||||||||||||| | | |||||||| |||||| ||||||||| |||||||| |||| |||||||| |
|
|
| T |
27849333 |
caacaacttgtataatttgtttaaatgaaattatacataaatcaacaatcaaccatcattcatattc |
27849267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 21189980 - 21189933
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacac |
144 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| ||||||| ||||||| |
|
|
| T |
21189980 |
tgcatatttaaatatgtcttacacctccacatagtcaacttgcgacac |
21189933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 15318238 - 15318356
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| || || |||||||||||||| |||||| | || | |||||||| ||||||||| |
|
|
| T |
15318238 |
aatgaaattcaacaacttgtatagtttatttaaatataaatatacacaa--cagcaatcaacaattcatcatacttaatttaacagctctggtaaaatag |
15318335 |
T |
|
| Q |
258 |
cataattaatcataattattt |
278 |
Q |
| |
|
|| |||||||||| |||||| |
|
|
| T |
15318336 |
cacgattaatcatagttattt |
15318356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 97 - 298
Target Start/End: Complemental strand, 34780 - 34580
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34780 |
tgcatatttaaatatgtcttacacctcaacatggtcaactcgtgacacgacgacttttgacaatggaatccaacaacatgtatattctatttaaatgcaa |
34681 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||| | |||| |||||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
34680 |
ctatgcataaatcagcaaccaacaatcaat-atattcaaatcaacagctctgataaattaacataatttatcacaattatttattctacccaaagaatcc |
34582 |
T |
|
| Q |
297 |
aa |
298 |
Q |
| |
|
|| |
|
|
| T |
34581 |
aa |
34580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 97 - 301
Target Start/End: Original strand, 23375095 - 23375298
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23375095 |
tgcatatttaaatatgtcttacaccttaacatggtcaactcatgacacaacgacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
23375194 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatcc |
296 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||| ||| |||||||| |
|
|
| T |
23375195 |
ctatgcataaatcagaaatcaacaatcaat-atattcaaatcaacagcttaggtaaaataacataattcatcataactatttgttccccccaaagaatcc |
23375293 |
T |
|
| Q |
297 |
aaccc |
301 |
Q |
| |
|
||||| |
|
|
| T |
23375294 |
aaccc |
23375298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 97 - 286
Target Start/End: Original strand, 40261458 - 40261649
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaactt-gtatattctatttaaatgca |
195 |
Q |
| |
|
||||||||||||||| | |||| |||||||||||||||| | |||||||||||||||| |||||| || ||||||||| ||||||| || ||||||||| |
|
|
| T |
40261458 |
tgcatatttaaatatgacgtacatctcaacatggtcaacttgtgacacaacaacttttggcaatggcattcaacaactttgtatattttaattaaatgca |
40261557 |
T |
|
| Q |
196 |
attatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacc |
286 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
40261558 |
attacacataaatcaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataattaatcataattatttactctacc |
40261649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 24160443 - 24160625
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||||||| |||| |||||| || ||||||||||| |||||||||||||| | |||||| |||||| |
|
|
| T |
24160443 |
tgcatatataaatatgacttacacatcaacatggtcaactaatgacataacaaccttcgacaatggaattcaacaacttgtataatttatttacatgcaa |
24160542 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattta |
279 |
Q |
| |
|
|||| |||||||| ||||||||||||| |||||||||||||| || ||| | |||||||| ||||||||||| |||||||| |
|
|
| T |
24160543 |
ttatacataaatccacaatcaacaatcattcatattcaaatcagcaactctgataaaataatataattaatcaggattattta |
24160625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 97 - 287
Target Start/End: Original strand, 23085577 - 23085769
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| | |||| |||||||||||||||| | ||| | |||||||||| |||||| || |||||||||||||| | ||||||||| ||| |
|
|
| T |
23085577 |
tgcatatttaaatatgacgtacatctcaacatggtcaacttgtgactctacaacttttggcaatggcattcaacaacttgtataatttatttaaatacaa |
23085676 |
T |
|
| Q |
197 |
ttatgcata-aatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatcataattatttattctaccc |
287 |
Q |
| |
|
||| |||| || | ||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
23085677 |
ttacacatagaacaatcaatcaataatcaatcatattcaaatcaacagctttggtagaaacaacataattaaccataattatttattctaccc |
23085769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 20353253 - 20353140
Alignment:
| Q |
174 |
ttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataa |
272 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |
|
|
| T |
20353253 |
ttgtatattttatttaaattcaattatacataaaacaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataa-taatcataa |
20353155 |
T |
|
| Q |
273 |
ttatttattctaccc |
287 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
20353154 |
ttatttattctaccc |
20353140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 21903342 - 21903515
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| | |||| |||||||||||||||| | |||| ||||||||||| |||||| || |||||||||||||| | ||||||||| || |
|
|
| T |
21903342 |
tgcatatttaaatatgacgtacatctcaacatggtcaacttgtgacataacaacttttgtcaatggcattcaacaacttgtataatttatttaaatataa |
21903441 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
269 |
Q |
| |
|
|||| |||| || ||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
21903442 |
ttatacataggacaacaatcaataatcaatcatattcaaatcaacagctctagtagaaacaacataattaatca |
21903515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 278
Target Start/End: Original strand, 22841166 - 22841321
Alignment:
| Q |
121 |
ctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
220 |
Q |
| |
|
|||||||| ||||||| || |||||||| ||||| |||| ||| |||||||||||||| | ||||||||| || ||| ||||| ||||||||| || |
|
|
| T |
22841166 |
ctcaacatagtcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcagca |
22841263 |
T |
|
| Q |
221 |
atcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
|| |||||| | || |||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
22841264 |
attcatcatacttaattcaacagctccggtaaaataacacaattaatcataactattt |
22841321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 25651426 - 25651580
Alignment:
| Q |
122 |
tcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaa |
221 |
Q |
| |
|
||||||||||||||| || |||| ||||| || ||| |||||| ||||||||| |||| | | |||| || |||| || | |||||| |||||||||| |
|
|
| T |
25651426 |
tcaacatggtcaactagcaacaccacaacattcaacattggaattcaacaacttatataatttgtttacatacaatcatactcaaatcaacaatcaacaa |
25651525 |
T |
|
| Q |
222 |
tcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatt |
277 |
Q |
| |
|
||| |||||| | |||||||| ||| | ||||||| ||||||||||||||||||| |
|
|
| T |
25651526 |
tcattcatatac-aatcaacaactctgataaaatattataattaatcataattatt |
25651580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 22109619 - 22109740
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||||||| |||| ||||||| || ||| | |||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
22109619 |
cttacacctcaacattgtcaattcgtgacacaacaacctttgcacaatggtattcaaaatcttgtataatttatttaaatataaatatacatcaaacaac |
22109718 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattca |
234 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
22109719 |
aaacaacaatcaatcatattca |
22109740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 20353309 - 20353251
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
155 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
20353309 |
tgcatacttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
20353251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 10040050 - 10039933
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || | ||||| | | |||||||||||||| | | |||||||| || |
|
|
| T |
10040050 |
tgcatatatgaatatgacttactcatcaacatggtcaactat-gacacaacaaccttcggcaatgaatttcaacaacttgtataatttgtttaaatgtaa |
10039952 |
T |
|
| Q |
197 |
ttatgcataaatcagcaat |
215 |
Q |
| |
|
|||| ||||||||| |||| |
|
|
| T |
10039951 |
ttatacataaatcaacaat |
10039933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0364 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0364
Description:
Target: scaffold0364; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 97 - 301
Target Start/End: Original strand, 7284 - 7490
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaac-ttgtatattctatttaaatgca |
195 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||| |
|
|
| T |
7284 |
tgcatattgaaatatgacttacacctcaacatggtcaactcgtgacacaacaacttttgacaatggaattcaacaactttgtatattttagttaaatgca |
7383 |
T |
|
| Q |
196 |
attatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacccgaagaat |
294 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
7384 |
attatacataagtcaacaatcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataattaatcctaattatttattctacctaaagaat |
7483 |
T |
|
| Q |
295 |
ccaaccc |
301 |
Q |
| |
|
||||||| |
|
|
| T |
7484 |
ccaaccc |
7490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 97 - 301
Target Start/End: Complemental strand, 21980918 - 21980711
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaactt-gtatattct-atttaaatgc |
194 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||| || |||||||||||||| |||||||| ||||||||| |||| || | | |||||||| |
|
|
| T |
21980918 |
tgcatatttaaatatgacttacatctccacatggtcaactcgtgatacaacaacttttgaaaatggaattcaacaactttgtatttttttaattaaatgc |
21980819 |
T |
|
| Q |
195 |
aattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacccgaagaa |
293 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21980818 |
aattatacataaatcaacaatcaacaatcaatcatattcaaatcagcagctctggtaaaaataacataattaatcataattatttattctacccaaagaa |
21980719 |
T |
|
| Q |
294 |
tccaaccc |
301 |
Q |
| |
|
|||||||| |
|
|
| T |
21980718 |
tccaaccc |
21980711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 285
Target Start/End: Complemental strand, 21559325 - 21559142
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaac-ttgtatattctatttaaatgca |
195 |
Q |
| |
|
||||||||||||||| |||| |||||||||||| ||||| | ||||||||||||||||||||||| || ||||||| ||||||||| |||||||||||| |
|
|
| T |
21559325 |
tgcatatttaaatatgacttatacctcaacatgggcaacttgtgacacaacaacttttgacaatggcattcaacaactttgtatattttatttaaatgca |
21559226 |
T |
|
| Q |
196 |
attatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctac |
285 |
Q |
| |
|
|||| |||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21559225 |
attacacata-------actcaacaatcaatcatattcaaatcaacagctctggtaaaaataacataattaatcataattatttattctac |
21559142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 277
Target Start/End: Original strand, 7785357 - 7785537
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| |||| | ||||||||||||||| || |||| ||||| | ||| || ||| |||||||||||||| | |||||| |||||| |
|
|
| T |
7785357 |
tgcatatataaatatgacttatgcatcaacatggtcaactagcaacaccacaacatccaacattgaaattcaacaacttgtataatttatttacatgcaa |
7785456 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatt |
277 |
Q |
| |
|
|||| | |||||| ||||||||||||| |||||| ||||||| | ||| | ||||||| ||||||||||| ||||||| |
|
|
| T |
7785457 |
ttatacttaaatccacaatcaacaatcattcatatgcaaatcagcgactctgataaaatattataattaatcagaattatt |
7785537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 26753854 - 26753929
Alignment:
| Q |
144 |
caacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaac |
219 |
Q |
| |
|
||||||| || ||||||| |||||||||| ||||||| | ||||||| || |||||| |||||||||||||||||| |
|
|
| T |
26753854 |
caacaaccttcgacaatgaaatccaacaatttgtataatttatttaagtgtaattatacataaatcagcaatcaac |
26753929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0371 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0371
Description:
Target: scaffold0371; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 287
Target Start/End: Original strand, 5551 - 5743
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| | |||| |||||||||||||||| | ||| | |||||||||| |||||| || |||||||||||||| | ||||||||| ||| |
|
|
| T |
5551 |
tgcatatttaaatatgacgtacatctcaacatggtcaacttgtgactctacaacttttgtcaatggcattcaacaacttgtataatttatttaaatacaa |
5650 |
T |
|
| Q |
197 |
ttatgcata-aatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatcataattatttattctaccc |
287 |
Q |
| |
|
|||| |||| || | ||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
5651 |
ttatacatagaacaatcaatcaataatcaatcatattcaaatcaacagctttggtagaaacaacataattaaccataattatttattctaccc |
5743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0149 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0149
Description:
Target: scaffold0149; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 287
Target Start/End: Complemental strand, 27924 - 27732
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||||||||||| | |||| |||||||||||||||| | ||| | |||||||||| |||||| || |||||||||||||| | ||||||||| ||| |
|
|
| T |
27924 |
tgcatatttaaatatgacgtacatctcaacatggtcaacttgtgactctacaacttttgtcaatggcattcaacaacttgtataatttatttaaatacaa |
27825 |
T |
|
| Q |
197 |
ttatgcata-aatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatcataattatttattctaccc |
287 |
Q |
| |
|
|||| |||| || | ||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
27824 |
ttatacatagaacaatcaatcaataatcaatcatattcaaatcaacagctttggtagaaacaacataattaaccataattatttattctaccc |
27732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 115 - 301
Target Start/End: Complemental strand, 32292 - 32105
Alignment:
| Q |
115 |
ttacacctcaacatggtcaactcgcgacacaacaa-cttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagca |
213 |
Q |
| |
|
||||||||| |||| ||||||| | |||||||||| | ||| |||||||||| |||||||||||||| | |||| | |||||||||| |||| |||| || |
|
|
| T |
32292 |
ttacacctccacatagtcaactagtgacacaacaaacctttaacaatggaattcaacaacttgtataatttattaacatgcaattatacatagatcaaca |
32193 |
T |
|
| Q |
214 |
atcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacccgaagaatccaaccc |
301 |
Q |
| |
|
|||| |||||||||| |||||||||| || ||| ||| ||||||||| |||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
32192 |
atcatcaatcaatcaaattcaaatcagcaactctggtaaaaataacacaattaatcataattatttattcta-ccaaagaatccaaccc |
32105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0388 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0388
Description:
Target: scaffold0388; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 286
Target Start/End: Complemental strand, 15982 - 15792
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| |||| || ||||||||||||| | || |||||||| || ||||||| ||| |||||||||||||| | |||||| |||||| |
|
|
| T |
15982 |
tgcatatataaatatgacttatacttcaacatggtcaaacagtgatacaacaaccttcgacaatgaaattcaacaacttgtataatttatttacatgcaa |
15883 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggt-aaaataacataattaatcataattatttattctacc |
286 |
Q |
| |
|
|||| |||| |||| |||||| ||||||||||||||||||||| || ||| || |||||| |||||||||||||||| |||||||||||| |
|
|
| T |
15882 |
ttatacatagatcaacaatcatcaatcaatcatattcaaatcagcaactctagtaaaaatagcataattaatcataatcatttattctacc |
15792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0117 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0117
Description:
Target: scaffold0117; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 269
Target Start/End: Original strand, 33863 - 34035
Alignment:
| Q |
99 |
catatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaat |
197 |
Q |
| |
|
||||||||||||| ||||||| ||||||| ||||||| | |||||||||| ||||| ||||||| || |||||||||||||| | ||||||||| ||| |
|
|
| T |
33863 |
catatttaaatatgacttacacttcaacattgtcaacttgtgacacaacaaattttgtacaatggtattcaacaacttgtataatttatttaaatataat |
33962 |
T |
|
| Q |
198 |
tatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
269 |
Q |
| |
|
||| |||| || ||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
33963 |
tatacataggacaacaatcaataatcaatcatattcaaatcaacaactctagtagaaataacataattaatca |
34035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 97 - 269
Target Start/End: Complemental strand, 182919 - 182747
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||| |||||| || | |||||||| || ||||||| ||| |||||||||||||||| ||||| |||||| |
|
|
| T |
182919 |
tgcatatataaatatgacttacacatcaacatgatcaactagcaagacaacaaccttcgacaatgaaattcaacaacttgtatattttatttgcatgcaa |
182820 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
269 |
Q |
| |
|
|||| |||||||| ||||||||||||| |||||| ||||||| || ||| | |||||||| ||| ||||||| |
|
|
| T |
182819 |
ttatacataaatccacaatcaacaatcattcatatgcaaatcagcaactctgataaaataatatacttaatca |
182747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 2947 - 3123
Alignment:
| Q |
100 |
atatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaatta |
199 |
Q |
| |
|
|||| ||||||| |||||||||||||||| |||||| || |||||||| ||||| |||| ||| |||||||||||||| | ||||||||| || || |
|
|
| T |
2947 |
atatataaatatgacttacacctcaacatgatcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatttatttaaatataaata |
3046 |
T |
|
| Q |
200 |
tgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
| ||||| |||||||||||||| |||||| |||| |||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
3047 |
tacataa--cagcaatcaacaattcatcatactcaactcaacagctccggtaaaataacacaattaatcataactattt |
3123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0556 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0556
Description:
Target: scaffold0556; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 300
Target Start/End: Original strand, 9848 - 10034
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||||||| |||| ||||||| || || |||||||||| | ||||||||| || ||| ||| || || | |
|
|
| T |
9848 |
cttacacctcaacattgtcaatttgtgacacaacaacctttgtacaatggtatttaaaaacttgtataatttatttaaatataaatatacatcaaacaac |
9947 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatccaacc |
300 |
Q |
| |
|
||||||||||||||||||||||| || ||| || ||||||||| ||||||||||||||||||||| | |||| || ||||||||||| |
|
|
| T |
9948 |
aatcaacaatcaatcatattcaactctgcagttctggtaaaatagcataattaatcataattatttgtcctacacg-agaatccaacc |
10034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 17526484 - 17526656
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||||||| || | |||||||| || ||||||||||| ||| |||||||||| | |||||| ||||| |
|
|
| T |
17526484 |
tgcatatataaatatgacttacacatcaacatggtcaactagcaatacaacaaccttcgacaatggaattcaagaacttgtataatttatttacatgcag |
17526583 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatca |
269 |
Q |
| |
|
|||| ||||| || ||| || |||||| ||||| |||||||| || ||| | |||||||| ||||||||||| |
|
|
| T |
17526584 |
ttatacataattccacaaccagcaatcattcatactcaaatcagcaactctgataaaataatataattaatca |
17526656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 269
Target Start/End: Complemental strand, 1590512 - 1590337
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg--acaatggaatccaacaacttgtatattctatttaaatgc |
194 |
Q |
| |
|
||||||||||||||| ||||||| ||||||| |||| || | |||||||||||||||| |||||| || ||||||||| |||| | ||||||||| |
|
|
| T |
1590512 |
tgcatatttaaatatgacttacacttcaacattgtcatcttgtgacacaacaacttttgttacaatgacattcaacaacttttataatttatttaaatat |
1590413 |
T |
|
| Q |
195 |
aattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggta-aaataacataattaatca |
269 |
Q |
| |
|
||| || |||| | || ||||||| |||||| |||| ||||||||||| ||| |||| ||| |||||||||||||| |
|
|
| T |
1590412 |
aatcatacatagaacaacaatcaataatcaaccataatcaaatcaacaactctggtagaaacaacataattaatca |
1590337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 278
Target Start/End: Complemental strand, 23621080 - 23620920
Alignment:
| Q |
119 |
acctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
217 |
Q |
| |
|
|||||||||| ||||| | | |||||||||| |||| ||||||| || ||| |||||||||| | ||||||||| || ||| ||| || || |||||| |
|
|
| T |
23621080 |
acctcaacatcgtcaatttgtgacacaacaaactttgtacaatggtattcaaaaacttgtataatttatttaaatataaatatacatcaaacaacaatca |
23620981 |
T |
|
| Q |
218 |
acaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
|||||||||||||||||| || |||||| || | |||| |||||||| ||||| |||||| |
|
|
| T |
23620980 |
acaatcaatcatattcaactctgcagctctgggacaatagcataattattcatagttattt |
23620920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 1584455 - 1584513
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
155 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
1584455 |
tgcatatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
1584513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 1639296 - 1639354
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttg |
155 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
1639296 |
tgcatatttaaatatgacttacacctcaacatggtcaacttgtgacacaacaacttttg |
1639354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 9185766 - 9185648
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| || ||||||||||| |||||| | || |||||||||| ||||||||| |
|
|
| T |
9185766 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--caacaatcaacaattcatcatacttaattcaacagctccggtaaaatag |
9185669 |
T |
|
| Q |
258 |
cataattaatcataattattt |
278 |
Q |
| |
|
|| |||||||||||| ||||| |
|
|
| T |
9185668 |
cacaattaatcataactattt |
9185648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 22346892 - 22346981
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
||||||||||| || || |||| | |||||||||||||||| | | ||||| || |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
22346892 |
gacacaacaaccttcgataatgaattccaacaacttgtataatttgtttaagtgtaattatacataaatcaacaatcaacaatcagtcat |
22346981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 17027068 - 17026988
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
220 |
Q |
| |
|
||||||||||| || ||||||| | | |||||||||||||| | ||||||| || |||||| ||||||||| ||||||||| |
|
|
| T |
17027068 |
gacacaacaaccttcgacaatgaatttcaacaacttgtataatttatttaagtgtaattatacataaatcaacaatcaaca |
17026988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 1584511 - 1584566
Alignment:
| Q |
174 |
ttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
||||| ||||||||||||| |||| || ||||| ||| |||||||||||||||||| |
|
|
| T |
1584511 |
ttgtacattctatttaaatacaatcatacataattcaacaatcaacaatcaatcat |
1584566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 1639352 - 1639407
Alignment:
| Q |
174 |
ttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
||||| ||| ||||||||| |||| || ||||||||| |||||||||||||||||| |
|
|
| T |
1639352 |
ttgtacattttatttaaatacaatcatacataaatcaacaatcaacaatcaatcat |
1639407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 14724683 - 14724747
Alignment:
| Q |
163 |
aatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatc |
227 |
Q |
| |
|
|||||||||| ||| ||| | ||||||| || |||||| ||||||||| ||| |||||||||||| |
|
|
| T |
14724683 |
aatccaacaatttgcataatttatttaagtgtaattatacataaatcaacaaccaacaatcaatc |
14724747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 278
Target Start/End: Complemental strand, 11569 - 11404
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| ||| | | | |||||||| || |||| ||||||| || ||| |||||||||| | ||||||||| || ||| ||| || | | |
|
|
| T |
11569 |
cttacacctcaacattgtctatttgtgacacaacgacctttgtacaatggtattcaaaaacttgtatactttatttaaatataaatatacatcaaataac |
11470 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattt |
278 |
Q |
| |
|
||||||||||||||||||||||| || |||||| ||||||||| |||||||| ||||| |||||| |
|
|
| T |
11469 |
aatcaacaatcaatcatattcaactctgcagctctggtaaaatagcataattattcatagttattt |
11404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 2674 - 2539
Alignment:
| Q |
142 |
cacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaa |
240 |
Q |
| |
|
||||||||| |||| ||||||| || | | |||||||||| | ||||||| | || ||| |||||| || |||||||||||||||||||||||| || |
|
|
| T |
2674 |
cacaacaacctttgtacaatggtattcgaaaacttgtataatttatttaattataaatatacataaaacaacaatcaacaatcaatcatattcaacgcag |
2575 |
T |
|
| Q |
241 |
cagctcgggtaaaataacataattaatcataattat |
276 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||| |
|
|
| T |
2574 |
cagctctggtaaaattgcataattaatcataattat |
2539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0381 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 13867 - 13709
Alignment:
| Q |
114 |
cttacacctcaacatggtcaactcgcgacacaacaacttttg-acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagc |
212 |
Q |
| |
|
||||||||||||||| ||| | | | |||||||| || |||| ||||||| || ||| |||||||||| | ||||||||| || ||| ||| || | | |
|
|
| T |
13867 |
cttacacctcaacattgtctatttgtgacacaacgacctttgtacaatggtattcaaaaacttgtatactttatttaaatataaatatacatcaaataac |
13768 |
T |
|
| Q |
213 |
aatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcata |
271 |
Q |
| |
|
||||||||||||||||||||||| || |||||| ||||||||| |||||||| ||||| |
|
|
| T |
13767 |
aatcaacaatcaatcatattcaactctgcagctctggtaaaatagcataattattcata |
13709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 188927 - 189109
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||| |||||| || | |||||||| || ||| ||| ||| ||||||||||||| | || ||| |||||| |
|
|
| T |
188927 |
tgcatatataaatatgacttacacatcaacatgatcaactagcaatacaacaaccttcgactatgaaatttaacaacttgtataatttaattacatgcaa |
189026 |
T |
|
| Q |
197 |
ttatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattattta |
279 |
Q |
| |
|
|||| |||||||| ||| || ||||| |||| |||||||| || ||| | |||||||| ||||||||||| |||||||| |
|
|
| T |
189027 |
ttatacataaatccacaaccagtaatcattcatgctcaaatcagcaactctgataaaataatataattaatcaggattattta |
189109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 13836657 - 13836738
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgta |
178 |
Q |
| |
|
||||||||||||||| | |||| |||||||||||||||| | |||||||||||||||||||||| || |||||||||||| |
|
|
| T |
13836657 |
tgcatatttaaatatgacgtacatctcaacatggtcaacttgtgacacaacaacttttgacaatgacattcaacaacttgta |
13836738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 30206347 - 30206264
Alignment:
| Q |
216 |
caacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatccaacc |
300 |
Q |
| |
|
||||||||| |||||||||| |||||||||| || |||||| ||| |||||||||||| |||| | |||| || ||||||||||| |
|
|
| T |
30206347 |
caacaatcactcatattcaactcaacagctctggcaaaatagcattattaatcataatcatttgtcctacacg-agaatccaacc |
30206264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 10200 - 10253
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaac |
150 |
Q |
| |
|
|||||||||| || | ||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
10200 |
tgcatatttagatgtgacttacacctcaacatggtcaacttgtgacacaacaac |
10253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 29518 - 29636
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||||| |||| ||||| |
|
|
| T |
29518 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagctccggtagaataa |
29615 |
T |
|
| Q |
258 |
cataattaatcataattattt |
278 |
Q |
| |
|
|| ||||| |||||||||||| |
|
|
| T |
29616 |
cacaattattcataattattt |
29636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 34759 - 34877
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| ||| |||||||||| |||||| | || |||||||||| |||||||||| |
|
|
| T |
34759 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagaaatcaacaattcatcatacttaattcaacagctccggtaaaataa |
34856 |
T |
|
| Q |
258 |
cataattaatcataattattt |
278 |
Q |
| |
|
|| ||||| |||||||||||| |
|
|
| T |
34857 |
cacaattattcataattattt |
34877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 21601 - 21483
Alignment:
| Q |
158 |
aatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataa |
257 |
Q |
| |
|
|||| ||| |||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || ||||||||| |||||||||| |
|
|
| T |
21601 |
aatgaaattcaacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagcttcggtaaaataa |
21504 |
T |
|
| Q |
258 |
cataattaatcataattattt |
278 |
Q |
| |
|
|| |||||||||||| ||||| |
|
|
| T |
21503 |
cacaattaatcataactattt |
21483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0860 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0860
Description:
Target: scaffold0860; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 565 - 646
Alignment:
| Q |
218 |
acaatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcataattatttattctacccgaagaatccaacc |
300 |
Q |
| |
|
|||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| | |||| | |||| || ||||||||||| |
|
|
| T |
565 |
acaatcaatcatattcaactcagcagctctggtaaaatagcataattaatcatattcatttgtcctacacg-agaatccaacc |
646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 4636 - 4558
Alignment:
| Q |
144 |
caacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaat |
222 |
Q |
| |
|
||||||| || ||||||| |||||||||| ||||||| | ||||||| || |||||| ||||||||| ||||||||||| |
|
|
| T |
4636 |
caacaaccttcgacaatgaaatccaacaatttgtataatttatttaagtgtaattatacataaatcaacaatcaacaat |
4558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0322 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0322
Description:
Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 19575 - 19655
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaaca |
220 |
Q |
| |
|
||||||||||| || ||||||| | | |||||||||||||| | ||||||| || |||||| ||||||||| ||||||||| |
|
|
| T |
19575 |
gacacaacaaccttcgacaatgaatttcaacaacttgtataatttatttaagtgtaattatacataaatcaacaatcaaca |
19655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 5951 - 5991
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactc |
137 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5951 |
tgcatatttaaatatgtcttacacctcaacatggtcaactc |
5991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 36481 - 36547
Alignment:
| Q |
156 |
acaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaat |
222 |
Q |
| |
|
|||||| |||||||||| ||||||| | ||||||| || |||||| ||||||||| ||||||||||| |
|
|
| T |
36481 |
acaatgaaatccaacaatttgtataatatatttaagtgtaattatacataaatcaacaatcaacaat |
36547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0335
Description:
Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 8312 - 8223
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
||||||||||| || |||||| | | |||||||||||||| | | ||||| || |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
8312 |
gacacaacaaccttcgacaataaatttcaacaacttgtataatttgtttaagtgtaattatacataaatcaacaatcaacaatcagtcat |
8223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0089
Description:
Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 2223 - 2300
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
217 |
Q |
| |
|
||||||||||| |||||||||| | |||||||||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
2223 |
gacacaacaacctttgacaatgaattccaacaacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
2300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 4771 - 4822
Alignment:
| Q |
220 |
aatcaatcatattcaaatcaacagctcgggtaaaataacataattaatcata |
271 |
Q |
| |
|
||||||||||||||| ||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
4771 |
aatcaatcatattcatctcagcagctctggtaaaatagcataattaatcata |
4822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 8414 - 8306
Alignment:
| Q |
168 |
aacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcatattcaaatcaacagctcgggtaaaataacataattaat |
267 |
Q |
| |
|
||||||||||||| | ||||||||| || ||| ||||| |||||||||||||| |||||| | || |||||||| | | || ||||||| ||||| | |
|
|
| T |
8414 |
aacaacttgtataatttatttaaatataaatatacataa--cagcaatcaacaattcatcatacttaattcaacagcgccgatagaataacaaaattatt |
8317 |
T |
|
| Q |
268 |
cataattattt |
278 |
Q |
| |
|
||||||||||| |
|
|
| T |
8316 |
cataattattt |
8306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0635 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0635
Description:
Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 7020 - 7137
Alignment:
| Q |
97 |
tgcatatttaaatatatcttacacctcaacatggtcaactcgcgacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaa |
196 |
Q |
| |
|
||||||| | ||||| ||||| | ||||||||||||||| ||||||||||| || | ||||| | | |||||||||||||| | | |||||||| || |
|
|
| T |
7020 |
tgcatatatgaatatgacttactcatcaacatggtcaactat-gacacaacaaccttcggcaatgaatttcaacaacttgtataatttgtttaaatgtaa |
7118 |
T |
|
| Q |
197 |
ttatgcataaatcagcaat |
215 |
Q |
| |
|
|||| ||||||||| |||| |
|
|
| T |
7119 |
ttatacataaatcaacaat |
7137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0395 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0395
Description:
Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 2089 - 1999
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatc-caacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaatcaatcat |
229 |
Q |
| |
|
||||||||||| || |||||| ||||| | |||||||||||| | ||||||| || |||||| ||| ||||| ||||||||| ||| |||| |
|
|
| T |
2089 |
gacacaacaaccttcgacaattgaatctccacaacttgtataatttatttaagtgtaattatacatcaatcaacaatcaacattcattcat |
1999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 1873 - 1792
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatcaacaat |
222 |
Q |
| |
|
||||||||||| || || |||| |||||||||| ||||||| | ||||||| || ||||| ||||||||| ||||||||||| |
|
|
| T |
1873 |
gacacaacaaccttcgataatgaaatccaacaatttgtataatttatttaagtg-tattatacataaatcaacaatcaacaat |
1792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0672 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0672
Description:
Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 8335 - 8258
Alignment:
| Q |
140 |
gacacaacaacttttgacaatggaatccaacaacttgtatattctatttaaatgcaattatgcataaatcagcaatca |
217 |
Q |
| |
|
||||||||||| || ||||||| | |||||||||||||||| | | ||| | || |||||| ||||||||| |||||| |
|
|
| T |
8335 |
gacacaacaaccttcgacaatgaattccaacaacttgtataatttgtttgagtgaaattatacataaatcaacaatca |
8258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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