View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7147_low_15 (Length: 254)
Name: NF7147_low_15
Description: NF7147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7147_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 243
Target Start/End: Original strand, 30239549 - 30239773
Alignment:
| Q |
19 |
ggtcatgccttcaatgtcgaggtaatatatgaaaagtgtccagatttttgtgataactgcaaggttattggtcaccatttatccagatgcaaagatgaca |
118 |
Q |
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| T |
30239549 |
ggtcatgccttcaatgtcgaggtaatatatgaaaagtgtccagatttttgtcataactgcaaggttattggtcaccatttatccagatgcaaagatgaca |
30239648 |
T |
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| Q |
119 |
agggcaagaagaaagtcctagtcaagaaggatatccaaaaattcattgaaaaaccagctcttgagaaagcaaatcctcccatggacgatactcataaggg |
218 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30239649 |
agggcaagaagaaagtcctagtcaagaaggatatcaaaaaattcattgaaaaaccagctcttgagaaagcaaatcctcccatggacgatactcataaggg |
30239748 |
T |
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| Q |
219 |
aagcaacgaatctacttcttttcat |
243 |
Q |
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|||||| | |||||||||||||||| |
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| T |
30239749 |
aagcaaagcatctacttcttttcat |
30239773 |
T |
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