View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7150_high_19 (Length: 241)
Name: NF7150_high_19
Description: NF7150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7150_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 21384227 - 21383996
Alignment:
| Q |
3 |
ttaaaacaaattgaccaatttaatcaagtgaatggagtatatcaagtgatt----aatgaaatttcgaatagagtttctgaagtttgaactctgacaaaa |
98 |
Q |
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| T |
21384227 |
ttaaaacaaattgaccaatttaatcaagtgaatg-agtatatcaagtgattgattaatcaaattttgaatagagtttctaaagtttgaactctgacggaa |
21384129 |
T |
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| Q |
99 |
ataattattgattagacattatttacctcccgattataggtta-aaccagtttcattttaaaaaatcaaatgatttgactgcacatcttcatcgtaaact |
197 |
Q |
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| T |
21384128 |
acaattattgattagacgttatttacctcctgattataggttataaccagtttcattctaaaaaatcaaatgatttgactgcatatcttcatcgtaaact |
21384029 |
T |
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| Q |
198 |
tttgaatataagggtcctctttaactccttcat |
230 |
Q |
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|||| ||||||||||||||||||||||| |||| |
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| T |
21384028 |
tttggatataagggtcctctttaactccctcat |
21383996 |
T |
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