View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7151_high_5 (Length: 345)
Name: NF7151_high_5
Description: NF7151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7151_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 38877433 - 38877102
Alignment:
| Q |
1 |
ttaatcagagcagacctctgatgcatatccaggagtggtacccgcaattggtttggtgtatgaccccacgggagagcttctctgaacagcctcacaaaaa |
100 |
Q |
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| T |
38877433 |
ttaatcagagcagacctctgatgcatatccaggagtggtacccgcaattggtttggtgtatgaccccacaggagagcttctctgaacagcctcacaaaaa |
38877334 |
T |
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| Q |
101 |
gcaaggagacgctcacggcttccaagttgtacggcctacaggcattgaagatcaatttcacttatgatctgaataattatcatctatatacatactgaaa |
200 |
Q |
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| T |
38877333 |
gcaaggagacgctcacggcttccaagttgtacggcctacaggcattgaagatcaatttcacttatgatctgaataattatcatctatatacatactgaaa |
38877234 |
T |
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| Q |
201 |
gaaactcctaagggactagtttttgccaacatcaaccacagtttttctaccagaaacggaatttcgctgccaacttaaaatcaaaattaaaaatcagata |
300 |
Q |
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| T |
38877233 |
gaaactcctaagggactagtttttgccaacatcaaccacagtttttctaccagaaacggaattttgctgccaacttaaaatcaaaattaaaaatcagata |
38877134 |
T |
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| Q |
301 |
caggtttcatctagaaagaaagatagcacagg |
332 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
38877133 |
caggtttcatctagaaagaaagatagcacagg |
38877102 |
T |
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