View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7155_low_4 (Length: 269)
Name: NF7155_low_4
Description: NF7155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7155_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 55374820 - 55374558
Alignment:
| Q |
1 |
atgtaagttgataagttttcataaacgaattaaagttaatctaaactaggctccattgtaacttctagcataattgacaaatttgttaaatatttagaac |
100 |
Q |
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| T |
55374820 |
atgtaagttgataagttttcataaacgaattaaagttaatctaaattaggctccattgtaacttctagcataattgacaaattagttaaatatttaaaac |
55374721 |
T |
|
| Q |
101 |
taaattctaattttacttagcttttgacttaaatataagttattatattgaatccaagcatgacaatttcacaagacgtgcttgtcctacttaaaagccg |
200 |
Q |
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| T |
55374720 |
taaattctaattttacttagcttttgacttaaatataagttattatattgaatccaagcatgagaatttcacaagacgtgcttgtcctacttaaaagccg |
55374621 |
T |
|
| Q |
201 |
tccaaatatatagatttctgaggagctttctattgtaaacactaattaacttctgatgtccat |
263 |
Q |
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| T |
55374620 |
tccaaatatatagatttctgaggagctttctattgtaaacactaattaacttcctatgtccat |
55374558 |
T |
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