View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7155_low_6 (Length: 205)
Name: NF7155_low_6
Description: NF7155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7155_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 49661664 - 49661516
Alignment:
| Q |
46 |
cataccaccacaaaacagtggatgttatatctttttcatagccaaactttgtaaggtttgtatggatgatgaatttgagaacaattatatgatagtttgt |
145 |
Q |
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| T |
49661664 |
cataccaccacaaaacagtggatgttatatctttttcatagccaaactttgtaaggtttgtatggatgatgaatttgagaacaattatatgatagtttgt |
49661565 |
T |
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| Q |
146 |
gtgtgataagagtgaca--cacatatacagcatatatagagatattctt |
192 |
Q |
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| T |
49661564 |
gtgtgataagagtgacacacacatatacagcatatatagagatattctt |
49661516 |
T |
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