View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7159_high_8 (Length: 252)

Name: NF7159_high_8
Description: NF7159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7159_high_8
NF7159_high_8
[»] chr6 (36 HSPs)
chr6 (11-186)||(34644859-34645034)
chr6 (17-186)||(19880131-19880300)
chr6 (17-186)||(18795523-18795692)
chr6 (17-186)||(25769024-25769193)
chr6 (17-163)||(21472457-21472603)
chr6 (19-186)||(19488553-19488720)
chr6 (17-185)||(15460170-15460338)
chr6 (62-186)||(19435835-19435959)
chr6 (19-179)||(5296487-5296647)
chr6 (17-186)||(21563411-21563580)
chr6 (17-186)||(21569270-21569439)
chr6 (19-179)||(8762214-8762374)
chr6 (70-186)||(19454253-19454369)
chr6 (62-186)||(14379241-14379365)
chr6 (62-186)||(14380791-14380915)
chr6 (62-179)||(10468173-10468290)
chr6 (19-186)||(18197006-18197173)
chr6 (62-186)||(28282137-28282261)
chr6 (21-186)||(23079302-23079467)
chr6 (62-179)||(24365252-24365369)
chr6 (19-186)||(18966573-18966740)
chr6 (42-186)||(19865520-19865664)
chr6 (17-186)||(25609140-25609309)
chr6 (17-186)||(22434702-22434871)
chr6 (17-186)||(22443100-22443269)
chr6 (46-185)||(15896928-15897067)
chr6 (19-186)||(20636582-20636749)
chr6 (17-179)||(5838498-5838660)
chr6 (17-179)||(16926919-16927081)
chr6 (17-186)||(16962724-16962893)
chr6 (197-238)||(20634428-20634469)
chr6 (208-241)||(23080218-23080251)
chr6 (197-238)||(25608349-25608390)
chr6 (85-186)||(27566327-27566428)
chr6 (209-241)||(18965795-18965827)
chr6 (208-240)||(23086244-23086276)
[»] scaffold0076 (2 HSPs)
scaffold0076 (17-186)||(32814-32983)
scaffold0076 (62-186)||(56082-56206)
[»] chr7 (37 HSPs)
chr7 (17-186)||(19613634-19613803)
chr7 (17-185)||(19148171-19148339)
chr7 (17-185)||(20747570-20747738)
chr7 (17-186)||(11387549-11387718)
chr7 (17-186)||(15101724-15101893)
chr7 (19-179)||(16949595-16949755)
chr7 (17-186)||(16071416-16071584)
chr7 (19-186)||(12205923-12206090)
chr7 (62-185)||(14285542-14285665)
chr7 (62-186)||(573-697)
chr7 (17-163)||(14263365-14263511)
chr7 (52-186)||(14434650-14434784)
chr7 (62-179)||(12456668-12456785)
chr7 (70-186)||(13666496-13666612)
chr7 (62-186)||(15341390-15341514)
chr7 (62-186)||(18053119-18053243)
chr7 (62-179)||(12457606-12457723)
chr7 (42-186)||(15153825-15153969)
chr7 (101-186)||(15625510-15625595)
chr7 (62-179)||(11305429-11305546)
chr7 (62-179)||(13022323-13022440)
chr7 (42-186)||(15204577-15204721)
chr7 (62-179)||(49153267-49153384)
chr7 (42-185)||(321205-321348)
chr7 (19-179)||(11771386-11771546)
chr7 (62-179)||(26117771-26117888)
chr7 (197-240)||(11770593-11770636)
chr7 (19-186)||(14040653-14040820)
chr7 (19-186)||(14350683-14350850)
chr7 (62-179)||(13967834-13967951)
chr7 (76-179)||(14955519-14955622)
chr7 (76-179)||(18178707-18178810)
chr7 (197-240)||(14262574-14262617)
chr7 (67-186)||(23505041-23505160)
chr7 (116-186)||(14130832-14130902)
chr7 (208-240)||(14041570-14041602)
chr7 (208-240)||(14351600-14351632)
[»] chr2 (24 HSPs)
chr2 (17-186)||(27364753-27364922)
chr2 (19-186)||(23277376-23277543)
chr2 (17-138)||(23099692-23099813)
chr2 (62-186)||(19651771-19651895)
chr2 (19-186)||(23294535-23294702)
chr2 (19-173)||(23111349-23111503)
chr2 (62-179)||(20828866-20828983)
chr2 (62-179)||(20833592-20833709)
chr2 (62-179)||(31831265-31831382)
chr2 (17-179)||(21324940-21325102)
chr2 (17-186)||(24676089-24676258)
chr2 (17-186)||(27209846-27210015)
chr2 (19-186)||(24819362-24819529)
chr2 (62-186)||(27788341-27788465)
chr2 (62-184)||(24949191-24949314)
chr2 (42-184)||(21890417-21890559)
chr2 (62-179)||(1064358-1064475)
chr2 (76-186)||(24876482-24876592)
chr2 (17-179)||(22756139-22756301)
chr2 (38-122)||(24707177-24707261)
chr2 (197-240)||(23073380-23073423)
chr2 (197-238)||(41607268-41607309)
chr2 (19-186)||(21144717-21144884)
chr2 (197-241)||(24819113-24819157)
[»] scaffold0029 (2 HSPs)
scaffold0029 (17-186)||(113559-113728)
scaffold0029 (13-186)||(95135-95308)
[»] chr5 (32 HSPs)
chr5 (17-186)||(21680094-21680263)
chr5 (17-186)||(21890075-21890244)
chr5 (42-185)||(21496957-21497100)
chr5 (19-186)||(24619613-24619780)
chr5 (19-186)||(24715844-24716011)
chr5 (19-186)||(24748872-24749039)
chr5 (42-186)||(21831102-21831246)
chr5 (19-186)||(22462835-22463001)
chr5 (19-179)||(20774649-20774809)
chr5 (42-186)||(20822336-20822480)
chr5 (19-185)||(21563291-21563457)
chr5 (19-184)||(22235238-22235403)
chr5 (62-179)||(24797758-24797875)
chr5 (62-179)||(37542742-37542859)
chr5 (62-186)||(17268695-17268819)
chr5 (62-179)||(20343172-20343289)
chr5 (19-184)||(26738045-26738210)
chr5 (62-179)||(28894303-28894420)
chr5 (62-179)||(28915774-28915891)
chr5 (62-179)||(28923129-28923246)
chr5 (62-179)||(14886352-14886469)
chr5 (67-179)||(23079455-23079567)
chr5 (197-240)||(23473045-23473088)
chr5 (62-179)||(25848965-25849082)
chr5 (63-179)||(22503569-22503685)
chr5 (17-179)||(23517434-23517596)
chr5 (17-186)||(18776671-18776840)
chr5 (17-186)||(23441111-23441280)
chr5 (17-122)||(23574694-23574799)
chr5 (17-137)||(20800398-20800518)
chr5 (197-241)||(22234445-22234489)
chr5 (19-186)||(20467415-20467582)
[»] chr3 (37 HSPs)
chr3 (17-186)||(14087271-14087440)
chr3 (20-186)||(13971485-13971651)
chr3 (17-186)||(14574521-14574690)
chr3 (17-185)||(10419407-10419575)
chr3 (19-185)||(18133710-18133876)
chr3 (22-179)||(13299889-13300046)
chr3 (22-179)||(13310547-13310704)
chr3 (52-186)||(16380325-16380459)
chr3 (22-179)||(13319869-13320026)
chr3 (62-186)||(31694593-31694717)
chr3 (19-186)||(15228247-15228414)
chr3 (17-179)||(17493235-17493397)
chr3 (62-186)||(31939501-31939625)
chr3 (17-184)||(16827565-16827732)
chr3 (70-184)||(11303188-11303302)
chr3 (19-173)||(15234128-15234282)
chr3 (62-179)||(47124549-47124666)
chr3 (62-179)||(16329067-16329184)
chr3 (19-122)||(12359891-12359994)
chr3 (62-179)||(10384573-10384690)
chr3 (62-179)||(28754923-28755040)
chr3 (62-186)||(4679036-4679160)
chr3 (62-186)||(8758489-8758613)
chr3 (62-186)||(41178120-41178244)
chr3 (101-186)||(15248735-15248820)
chr3 (52-185)||(16835907-16836040)
chr3 (70-179)||(11960584-11960693)
chr3 (70-179)||(16337927-16338036)
chr3 (55-186)||(44777845-44777976)
chr3 (134-186)||(12360021-12360073)
chr3 (42-186)||(15209479-15209623)
chr3 (82-186)||(16692752-16692856)
chr3 (197-241)||(16826774-16826818)
chr3 (197-241)||(17491354-17491398)
chr3 (17-179)||(12498843-12499005)
chr3 (42-179)||(16372007-16372144)
chr3 (62-186)||(13942622-13942746)
[»] scaffold0028 (6 HSPs)
scaffold0028 (17-186)||(49651-49820)
scaffold0028 (76-186)||(9474-9584)
scaffold0028 (76-186)||(15936-16046)
scaffold0028 (17-186)||(753-922)
scaffold0028 (197-238)||(10393-10434)
scaffold0028 (197-238)||(16855-16896)
[»] scaffold0090 (2 HSPs)
scaffold0090 (17-179)||(19856-20018)
scaffold0090 (17-179)||(24018-24180)
[»] scaffold0117 (1 HSPs)
scaffold0117 (17-169)||(6822-6974)
[»] chr8 (38 HSPs)
chr8 (17-185)||(19852447-19852615)
chr8 (17-185)||(19858483-19858651)
chr8 (17-185)||(21841453-21841621)
chr8 (62-185)||(1267274-1267397)
chr8 (17-185)||(20009497-20009665)
chr8 (19-186)||(31416053-31416220)
chr8 (17-186)||(23655962-23656131)
chr8 (17-163)||(20985124-20985270)
chr8 (42-186)||(20389134-20389278)
chr8 (19-179)||(20975230-20975390)
chr8 (21-179)||(22371982-22372140)
chr8 (28-186)||(22051898-22052056)
chr8 (62-179)||(803295-803412)
chr8 (62-179)||(6604700-6604817)
chr8 (62-179)||(6680153-6680270)
chr8 (62-179)||(12305800-12305917)
chr8 (62-186)||(31570464-31570588)
chr8 (19-186)||(22247996-22248163)
chr8 (19-186)||(22988231-22988398)
chr8 (17-179)||(16407622-16407784)
chr8 (70-176)||(29303056-29303162)
chr8 (62-179)||(14566184-14566301)
chr8 (62-179)||(16270846-16270963)
chr8 (17-186)||(19979002-19979171)
chr8 (70-179)||(27355590-27355698)
chr8 (197-240)||(22376239-22376282)
chr8 (197-240)||(22382414-22382457)
chr8 (17-186)||(30312721-30312890)
chr8 (42-186)||(22377056-22377200)
chr8 (42-186)||(22383231-22383375)
chr8 (197-240)||(22422678-22422721)
chr8 (88-186)||(23949954-23950052)
chr8 (101-186)||(20395793-20395878)
chr8 (17-179)||(21166115-21166277)
chr8 (197-238)||(19864880-19864921)
chr8 (197-238)||(21920534-21920575)
chr8 (17-186)||(32601179-32601348)
chr8 (101-137)||(23886108-23886144)
[»] scaffold0108 (1 HSPs)
scaffold0108 (17-186)||(48104-48273)
[»] scaffold0192 (1 HSPs)
scaffold0192 (17-186)||(27524-27693)
[»] scaffold0053 (2 HSPs)
scaffold0053 (17-184)||(48171-48338)
scaffold0053 (19-186)||(56986-57153)
[»] scaffold2112 (1 HSPs)
scaffold2112 (17-163)||(1-147)
[»] scaffold0001 (3 HSPs)
scaffold0001 (17-186)||(89582-89751)
scaffold0001 (17-186)||(90260-90429)
scaffold0001 (197-240)||(494934-494977)
[»] scaffold0244 (1 HSPs)
scaffold0244 (17-186)||(18349-18518)
[»] chr4 (26 HSPs)
chr4 (17-186)||(15002498-15002667)
chr4 (22-186)||(1648416-1648580)
chr4 (19-186)||(8706887-8707054)
chr4 (19-186)||(27901355-27901522)
chr4 (19-185)||(15414162-15414328)
chr4 (17-186)||(15246893-15247062)
chr4 (17-185)||(15078605-15078773)
chr4 (44-185)||(15320120-15320261)
chr4 (70-186)||(15358307-15358423)
chr4 (76-186)||(16148680-16148790)
chr4 (76-186)||(16152826-16152936)
chr4 (62-179)||(3263973-3264090)
chr4 (63-179)||(29452717-29452833)
chr4 (62-179)||(44661045-44661162)
chr4 (42-178)||(14695090-14695226)
chr4 (67-179)||(33223899-33224011)
chr4 (197-240)||(14695999-14696042)
chr4 (62-179)||(11206410-11206527)
chr4 (62-179)||(20891958-20892075)
chr4 (70-186)||(14850293-14850409)
chr4 (197-240)||(14849449-14849492)
chr4 (17-186)||(15146759-15146928)
chr4 (17-123)||(18614698-18614804)
chr4 (17-186)||(18226320-18226489)
chr4 (197-241)||(16149596-16149640)
chr4 (197-241)||(16153742-16153786)
[»] scaffold0751 (1 HSPs)
scaffold0751 (18-186)||(3176-3344)
[»] scaffold0523 (1 HSPs)
scaffold0523 (17-185)||(870-1038)
[»] scaffold0234 (1 HSPs)
scaffold0234 (19-186)||(24211-24378)
[»] scaffold0476 (1 HSPs)
scaffold0476 (52-186)||(2502-2636)
[»] scaffold2094 (1 HSPs)
scaffold2094 (21-186)||(203-368)
[»] scaffold0106 (1 HSPs)
scaffold0106 (17-186)||(32411-32580)
[»] scaffold0026 (3 HSPs)
scaffold0026 (17-185)||(29058-29226)
scaffold0026 (197-239)||(30863-30905)
scaffold0026 (197-241)||(50726-50770)
[»] scaffold0249 (1 HSPs)
scaffold0249 (17-184)||(1110-1276)
[»] scaffold0068 (1 HSPs)
scaffold0068 (96-186)||(34188-34278)
[»] scaffold0165 (1 HSPs)
scaffold0165 (17-185)||(5431-5599)
[»] scaffold0034 (3 HSPs)
scaffold0034 (62-186)||(13083-13207)
scaffold0034 (19-186)||(68370-68537)
scaffold0034 (19-179)||(4092-4252)
[»] scaffold0600 (1 HSPs)
scaffold0600 (17-186)||(4776-4945)
[»] scaffold0404 (1 HSPs)
scaffold0404 (17-186)||(5750-5919)
[»] scaffold0403 (2 HSPs)
scaffold0403 (17-186)||(3791-3960)
scaffold0403 (197-238)||(8291-8332)
[»] scaffold0304 (1 HSPs)
scaffold0304 (17-186)||(2622-2791)
[»] scaffold1288 (1 HSPs)
scaffold1288 (17-185)||(1991-2159)
[»] scaffold0222 (2 HSPs)
scaffold0222 (19-185)||(2494-2660)
scaffold0222 (62-184)||(8062-8184)
[»] scaffold0139 (3 HSPs)
scaffold0139 (17-179)||(286-448)
scaffold0139 (85-184)||(28219-28318)
scaffold0139 (85-184)||(34472-34571)
[»] scaffold0682 (1 HSPs)
scaffold0682 (17-186)||(883-1052)
[»] scaffold0067 (4 HSPs)
scaffold0067 (62-186)||(51362-51486)
scaffold0067 (62-186)||(60396-60520)
scaffold0067 (62-186)||(66784-66908)
scaffold0067 (92-186)||(26400-26494)
[»] chr1 (24 HSPs)
chr1 (19-179)||(24098811-24098971)
chr1 (19-173)||(23197454-23197608)
chr1 (62-186)||(20856011-20856135)
chr1 (62-186)||(20939314-20939438)
chr1 (70-179)||(19662396-19662505)
chr1 (62-179)||(20295403-20295520)
chr1 (70-184)||(19855291-19855405)
chr1 (19-119)||(20835108-20835208)
chr1 (52-185)||(19760114-19760247)
chr1 (62-179)||(31539248-31539365)
chr1 (62-179)||(37678071-37678188)
chr1 (76-186)||(50619509-50619619)
chr1 (42-179)||(22110013-22110150)
chr1 (42-179)||(22113862-22113999)
chr1 (19-186)||(16373513-16373680)
chr1 (197-242)||(20139982-20140027)
chr1 (17-122)||(21025221-21025326)
chr1 (76-186)||(19107352-19107462)
chr1 (197-240)||(22116814-22116857)
chr1 (197-240)||(50618813-50618856)
chr1 (62-179)||(21951900-21952017)
chr1 (197-238)||(51331908-51331949)
chr1 (154-186)||(20835231-20835263)
chr1 (197-241)||(20938478-20938522)
[»] scaffold0298 (3 HSPs)
scaffold0298 (19-186)||(11196-11363)
scaffold0298 (19-186)||(14966-15133)
scaffold0298 (17-186)||(20983-21152)
[»] scaffold0010 (4 HSPs)
scaffold0010 (19-185)||(46538-46704)
scaffold0010 (62-179)||(41515-41632)
scaffold0010 (197-240)||(3831-3874)
scaffold0010 (42-179)||(2921-3058)
[»] scaffold0011 (4 HSPs)
scaffold0011 (17-186)||(149570-149739)
scaffold0011 (19-186)||(194843-195010)
scaffold0011 (197-236)||(24879-24918)
scaffold0011 (19-179)||(25672-25832)
[»] scaffold1830 (1 HSPs)
scaffold1830 (70-186)||(1-117)
[»] scaffold0309 (2 HSPs)
scaffold0309 (19-186)||(10793-10960)
scaffold0309 (197-238)||(16560-16601)
[»] scaffold0261 (2 HSPs)
scaffold0261 (23-186)||(14340-14503)
scaffold0261 (23-186)||(22519-22682)
[»] scaffold0035 (1 HSPs)
scaffold0035 (70-185)||(3752-3867)
[»] scaffold0232 (1 HSPs)
scaffold0232 (17-179)||(823-985)
[»] scaffold0058 (1 HSPs)
scaffold0058 (67-185)||(20121-20239)
[»] scaffold0009 (1 HSPs)
scaffold0009 (62-179)||(249620-249737)
[»] scaffold0465 (1 HSPs)
scaffold0465 (19-186)||(372-540)
[»] scaffold0156 (1 HSPs)
scaffold0156 (70-186)||(28225-28341)
[»] scaffold0004 (2 HSPs)
scaffold0004 (62-186)||(323704-323828)
scaffold0004 (46-184)||(202634-202772)
[»] scaffold1646 (1 HSPs)
scaffold1646 (19-186)||(324-491)
[»] scaffold0049 (1 HSPs)
scaffold0049 (42-184)||(51025-51167)
[»] scaffold0130 (1 HSPs)
scaffold0130 (19-184)||(9947-10112)
[»] scaffold1061 (1 HSPs)
scaffold1061 (70-186)||(2588-2704)
[»] scaffold0865 (1 HSPs)
scaffold0865 (17-113)||(3409-3505)
[»] scaffold0367 (1 HSPs)
scaffold0367 (62-186)||(6420-6544)
[»] scaffold0133 (1 HSPs)
scaffold0133 (17-113)||(30422-30518)
[»] scaffold0126 (1 HSPs)
scaffold0126 (62-186)||(41917-42041)
[»] scaffold0114 (2 HSPs)
scaffold0114 (62-186)||(20900-21024)
scaffold0114 (62-186)||(45517-45641)
[»] scaffold0077 (1 HSPs)
scaffold0077 (70-186)||(20631-20747)
[»] scaffold0060 (1 HSPs)
scaffold0060 (19-179)||(43790-43950)
[»] scaffold0124 (1 HSPs)
scaffold0124 (19-186)||(13200-13367)
[»] scaffold0101 (1 HSPs)
scaffold0101 (67-186)||(4639-4758)
[»] scaffold0518 (1 HSPs)
scaffold0518 (19-185)||(11734-11900)
[»] scaffold0071 (1 HSPs)
scaffold0071 (28-186)||(48354-48512)
[»] scaffold0020 (2 HSPs)
scaffold0020 (85-179)||(100754-100848)
scaffold0020 (45-186)||(181199-181340)
[»] scaffold0203 (1 HSPs)
scaffold0203 (19-184)||(13438-13603)
[»] scaffold0239 (1 HSPs)
scaffold0239 (62-186)||(11968-12092)
[»] scaffold0213 (1 HSPs)
scaffold0213 (62-186)||(5518-5642)
[»] scaffold0585 (1 HSPs)
scaffold0585 (18-104)||(6229-6315)
[»] scaffold0742 (1 HSPs)
scaffold0742 (62-186)||(6213-6337)
[»] scaffold0120 (2 HSPs)
scaffold0120 (70-186)||(742-857)
scaffold0120 (19-179)||(13065-13225)
[»] scaffold0235 (2 HSPs)
scaffold0235 (19-186)||(10596-10763)
scaffold0235 (19-186)||(20810-20977)
[»] scaffold0190 (1 HSPs)
scaffold0190 (62-179)||(32501-32618)
[»] scaffold0056 (1 HSPs)
scaffold0056 (42-179)||(4515-4652)
[»] scaffold0046 (1 HSPs)
scaffold0046 (62-179)||(81014-81131)
[»] scaffold0012 (2 HSPs)
scaffold0012 (42-186)||(230043-230187)
scaffold0012 (89-186)||(218626-218723)
[»] scaffold1602 (1 HSPs)
scaffold1602 (42-186)||(1229-1373)
[»] scaffold0270 (4 HSPs)
scaffold0270 (197-240)||(5788-5831)
scaffold0270 (197-240)||(12918-12961)
scaffold0270 (42-186)||(4871-5015)
scaffold0270 (42-186)||(12001-12145)
[»] scaffold0089 (2 HSPs)
scaffold0089 (19-122)||(10501-10604)
scaffold0089 (62-179)||(15895-16012)
[»] scaffold0005 (2 HSPs)
scaffold0005 (67-186)||(261308-261427)
scaffold0005 (42-179)||(277992-278129)
[»] scaffold0708 (1 HSPs)
scaffold0708 (62-179)||(7327-7444)
[»] scaffold0180 (1 HSPs)
scaffold0180 (42-186)||(31915-32059)
[»] scaffold0037 (1 HSPs)
scaffold0037 (46-186)||(116071-116211)
[»] scaffold0331 (1 HSPs)
scaffold0331 (19-186)||(17116-17283)
[»] scaffold0113 (1 HSPs)
scaffold0113 (94-186)||(25079-25171)
[»] scaffold0104 (2 HSPs)
scaffold0104 (67-179)||(20401-20513)
scaffold0104 (67-179)||(23221-23333)
[»] scaffold0064 (1 HSPs)
scaffold0064 (42-186)||(39921-40065)
[»] scaffold0018 (4 HSPs)
scaffold0018 (19-186)||(11336-11503)
scaffold0018 (19-186)||(17528-17695)
scaffold0018 (197-241)||(11087-11131)
scaffold0018 (197-241)||(17279-17323)
[»] scaffold0411 (1 HSPs)
scaffold0411 (46-184)||(14245-14383)
[»] scaffold0359 (1 HSPs)
scaffold0359 (19-186)||(17681-17848)
[»] scaffold0042 (2 HSPs)
scaffold0042 (17-184)||(66407-66574)
scaffold0042 (42-179)||(38982-39119)
[»] scaffold0040 (3 HSPs)
scaffold0040 (19-186)||(15877-16044)
scaffold0040 (197-240)||(111834-111877)
scaffold0040 (42-186)||(112650-112794)
[»] scaffold0006 (2 HSPs)
scaffold0006 (19-186)||(102233-102400)
scaffold0006 (197-238)||(103152-103193)
[»] scaffold0676 (1 HSPs)
scaffold0676 (17-186)||(7014-7183)
[»] scaffold0088 (1 HSPs)
scaffold0088 (62-179)||(27940-28057)
[»] scaffold0647 (1 HSPs)
scaffold0647 (19-186)||(1908-2075)
[»] scaffold0017 (3 HSPs)
scaffold0017 (42-186)||(19229-19373)
scaffold0017 (17-182)||(57021-57186)
scaffold0017 (17-123)||(196615-196721)
[»] scaffold0431 (1 HSPs)
scaffold0431 (76-186)||(8366-8476)
[»] scaffold0084 (2 HSPs)
scaffold0084 (85-184)||(6223-6322)
scaffold0084 (197-241)||(7137-7181)
[»] scaffold0083 (2 HSPs)
scaffold0083 (19-186)||(10155-10322)
scaffold0083 (197-241)||(9380-9424)
[»] scaffold0081 (5 HSPs)
scaffold0081 (42-137)||(19651-19746)
scaffold0081 (42-122)||(35090-35170)
scaffold0081 (42-186)||(50432-50576)
scaffold0081 (197-241)||(20518-20562)
scaffold0081 (197-241)||(35942-35986)
[»] scaffold0023 (3 HSPs)
scaffold0023 (197-240)||(2851-2894)
scaffold0023 (45-184)||(3622-3761)
scaffold0023 (198-238)||(151029-151069)
[»] scaffold0501 (1 HSPs)
scaffold0501 (43-179)||(3201-3337)
[»] scaffold0405 (1 HSPs)
scaffold0405 (208-240)||(455-487)
[»] scaffold0396 (1 HSPs)
scaffold0396 (43-178)||(5039-5174)
[»] scaffold0282 (2 HSPs)
scaffold0282 (197-241)||(14825-14869)
scaffold0282 (19-113)||(15621-15715)
[»] scaffold0278 (1 HSPs)
scaffold0278 (197-241)||(367-411)
[»] scaffold0102 (1 HSPs)
scaffold0102 (11-103)||(40781-40873)
[»] scaffold1715 (1 HSPs)
scaffold1715 (72-131)||(13-72)
[»] scaffold1373 (1 HSPs)
scaffold1373 (197-240)||(1180-1223)
[»] scaffold0333 (2 HSPs)
scaffold0333 (197-240)||(17571-17614)
scaffold0333 (42-186)||(16655-16798)
[»] scaffold0293 (2 HSPs)
scaffold0293 (209-240)||(14385-14416)
scaffold0293 (42-186)||(13468-13612)
[»] scaffold0122 (1 HSPs)
scaffold0122 (197-240)||(38294-38337)
[»] scaffold0074 (2 HSPs)
scaffold0074 (17-179)||(4147-4309)
scaffold0074 (208-238)||(5031-5061)
[»] scaffold0022 (1 HSPs)
scaffold0022 (197-240)||(55672-55715)
[»] scaffold0375 (1 HSPs)
scaffold0375 (17-179)||(2951-3113)
[»] scaffold0228 (1 HSPs)
scaffold0228 (195-241)||(20154-20200)
[»] scaffold0540 (1 HSPs)
scaffold0540 (197-238)||(6677-6718)
[»] scaffold0319 (1 HSPs)
scaffold0319 (197-238)||(685-726)
[»] scaffold0093 (1 HSPs)
scaffold0093 (70-179)||(27268-27377)
[»] scaffold0080 (1 HSPs)
scaffold0080 (197-238)||(50009-50050)
[»] scaffold1710 (1 HSPs)
scaffold1710 (154-186)||(864-896)
[»] scaffold0507 (1 HSPs)
scaffold0507 (70-185)||(9971-10086)
[»] scaffold0379 (1 HSPs)
scaffold0379 (19-186)||(7030-7197)
[»] scaffold0243 (1 HSPs)
scaffold0243 (42-186)||(26106-26250)
[»] scaffold0109 (1 HSPs)
scaffold0109 (42-186)||(32735-32879)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 34644859 - 34645034
Alignment:
Q  11 tggacatcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaat 110  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34644859 tggacgtcaagtttgtggatttaatgattgatagcaatcaaactgaagatggtgatttcaaggttgatgaacacggtgtgttgagattcagaggcagaat 34644958  T
Q  111 ttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34644959 ttgcattcctgataacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 34645034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 19880300 - 19880131
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| ||||||||| ||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||    
T  19880300 tcaagtttgtggatttaatggttgatagtaatcagactgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggcagaatttgtat 19880201  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19880200 tcctaacaacgatgagatgaaaaggttgattttggaagaaagccacaagagtagcttgagtatccatccg 19880131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 18795692 - 18795523
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||  |||||||||| |||||| | |||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||    
T  18795692 tcaagtttgtggatttaatgttttatagtaatcaatctgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggtagaatttgtat 18795593  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| ||||| |||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  18795592 tccggacaatgatgagttgaaaaagttgatcttggaagaaagtcacaagagtagcttgagtatccatccg 18795523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 25769193 - 25769024
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| ||||||||||| ||||| |||||| |||||||||||||| || |||||||||||||| ||||| |||||||| ||    
T  25769193 tcaagtttgtggatttaatggttgctagtaatcaaaatgaagatggtgacttcaaggttgatgatcagggtgtgttgaggtttagaggaagaatttgtat 25769094  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| |  |||||| ||||||  ||||||||||||||||||||||  |||||||| ||||| ||||||    
T  25769093 tcctgatagtgatgagttgaaaaagttgattttggaagaaagtcacagaagtagcttaagtattcatccg 25769024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 21472603 - 21472457
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| | |||| |||||||||||||| || || ||||||||||||||||| | |||||||||    
T  21472603 tcaagtttgtggatttgatggttgctagtaatcaaactgaagatagtgacttcaaggttgatgatcagggcgtgttgaggttcagaggaataatttgcat 21472504  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcaca 163  Q
    |||||| |  |||||| ||||||  |||||||| |||||||||||||    
T  21472503 tcctgatagtgatgagttgaaaaagttgattttagaagaaagtcaca 21472457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 19488553 - 19488720
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||||||||||| |||||| ||| |||||||||| || ||||||||||| ||| ||||||||||| | ||||    
T  19488553 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttccaggttgatgatcaaggtgtgttgagattccgaggcagaattcgtattc 19488652  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||||    
T  19488653 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccg 19488720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 15460338 - 15460170
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| |||||||||| |||| | |||||||||||| ||||||||||| ||||| ||||| || |||||||||||||| ||    
T  15460338 tcaagtttgtggatttaatggttgatagtaatcaagctgaggatggtgatttcaaagttgatgaacaaggtgtattgagatttagaggcagaatttgtat 15460239  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||| ||||| || ||  |||| |  |||||||| ||||||||||| ||||| |  |||||||| |||||    
T  15460238 tcccgacaatgaagaattgaagaagttgattttagaagaaagtcataagagcaatttgagtattcatcc 15460170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 19435959 - 19435835
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||| ||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||| ||||||  |||||||| ||| |||||||    
T  19435959 gtgacttcaaggtggatgatcagggtgtgttgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaataaagtca 19435860  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  19435859 caagagtagcttgagtattcatccg 19435835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 5296487 - 5296647
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| |||   ||||| |||| || | | |||| |||||||||||||| || ||||| ||||| |||||||| |||||||| ||||    
T  5296487 aagtttgttgatttaatgtttgcgggtaatgaaacagaggatagtgacttcaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattc 5296586  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| || ||  ||||||  |||||||| ||||||||| |||||||||||||||||||    
T  5296587 ctgacaatgaagaattgaaaaagttgattttagaagaaagttacaagagtagcttgagtat 5296647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 21563411 - 21563580
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||| || || ||  |||||||||| |||| | | |||||||||||||||||||||| || |||||||| || |||||||||||||| ||    
T  21563411 tcaagtttgtggatatattggttactagtaatcaagctgaggctagtgatttcaaggttgatgaacaaggcgtgttgagatttagaggcagaatttgtat 21563510  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||| |||||   || ||||| || ||||| |||| ||||| ||| || |||||||||    
T  21563511 tcctgataatgatgagttgaaacagttaattttagaggaaagccacaggagtaacttaagcatccatccg 21563580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 21569270 - 21569439
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||| || || ||  |||||||||| |||| | | |||||||||||||||||||||| || |||||||| || |||||||||||||| ||    
T  21569270 tcaagtttgtggatgtattggttactagtaatcaagctgaggctagtgatttcaaggttgatgaacaaggcgtgttgagatttagaggcagaatttgtat 21569369  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||| |||||   || ||||| || ||||| |||| ||||| ||| || |||||||||    
T  21569370 tcctgataatgatgagttgaaacagttaattttagaggaaagccacaggagtaacttaagcatccatccg 21569439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 8762214 - 8762374
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| |||   ||||| |||| || | | |||| |||||||||||||| || ||||| ||||| |||||||| |||||||| ||||    
T  8762214 aagtttgttgatttaatggttgcgggtaatgaaacagaggatagtgacttcaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattc 8762313  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| || ||  ||||||  |||||||| ||| |||||||||| ||||||||||||||    
T  8762314 ctgacaatgaagaattgaaaaagttgattttagaataaagtcacaaaagtagcttgagtat 8762374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 19454369 - 19454253
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||  | || ||| |||||| ||||||||| || ||||||||||||||||    
T  19454369 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctgatgatgacgagttgaaaaaattgattttcgaggaaagtcacaagagta 19454270  T
Q  170 gcttgagtatccatccg 186  Q
     ||| ||||| ||||||    
T  19454269 acttaagtattcatccg 19454253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 14379241 - 14379365
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||| ||| ||||| || ||||| |||||||||||||| |||||||| |||| |||||| |||||| ||||||  || ||||| || ||||||||    
T  14379241 gtgacttcatggtggatgatcagggtgtattgaggttcagaggaagaatttgtattcgtgacaatgatgagttgaaaaagttaattttagaggaaagtca 14379340  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||| | ||||||    
T  14379341 caagagtagcttgagtgttcatccg 14379365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 14380791 - 14380915
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||| ||| ||||| || ||||| |||||||||||||| |||||||| |||| |||||| |||||| ||||||  || ||||| || ||||||||    
T  14380791 gtgacttcatggtggatgatcagggtgtattgaggttcagaggaagaatttgtattcgtgacaatgatgagttgaaaaagttaattttagaggaaagtca 14380890  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||| | ||||||    
T  14380891 caagagtagcttgagtgttcatccg 14380915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 10468173 - 10468290
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||| |||||||| || ||||| |||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||    
T  10468173 gtgacttcaaagttgatgatcagggtgttttgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattctagaagagagtca 10468272  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  10468273 caagagtaggttgagtat 10468290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 18197006 - 18197173
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||| ||| | | | |||| || ||||| ||||| || ||||||||||| ||  |||| |||||||| ||||    
T  18197006 aagtttgtggacttgttggttgctagtaatcacactaaggatagtgactttaaggtcgatgatcaaggtgtgttgagatttcgaggtagaatttgtattc 18197105  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||| ||||||||||||| |||| ||||| | ||||| |||||||  |||||||||||||| ||||||    
T  18197106 cagacgacgatgagatgaagaaga-tgattcttgaagagagtcacagaagtagcttgagtattcatccg 18197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 28282137 - 28282261
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  28282137 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 28282236  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  28282237 taagagtagcttaagcattcatccg 28282261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 23079467 - 23079302
Alignment:
Q  21 gtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcct 120  Q
    |||||| |||||  || ||| ||||||||| ||||||| | ||||||| ||  | ||||| || || |||||||| ||| |||| |||||||  ||||||    
T  23079467 gtttgtagatttgttggttgctagtaatcagactgaagatagtgattttaaaatcgatgatcaaggagtgttgagattccgagggagaatttctattcct 23079368  T
Q  121 gacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| | ||||||||||| |||| ||||| | ||||| ||||| |  |||||||||||||||||||||    
T  23079367 gacgatgatgagatgaagaaga-tgattcttgaagagagtcatagaagtagcttgagtatccatccg 23079302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 24365369 - 24365252
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||| || || ||| |||| |  |||||| | || || |||||    
T  24365369 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtca 24365270  T
Q  162 caagagtagcttgagtat 179  Q
    ||| ||||| ||||||||    
T  24365269 caatagtaggttgagtat 24365252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 18966573 - 18966740
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||| | |||| | | ||||| ||| ||| | |||| || ||||||||||| || || |||||| | ||  |||| |||||||| ||||    
T  18966573 aagtttgtagatttatttattggtggaaatcagactaaagatagtgactttaaggttgatgatcagggagtgttgtgatttcgaggtagaatttgtattc 18966672  T
Q  119 ctgacaacgatgagatga-aaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| ||||||||||  |||| ||||| | ||||| |||||||  |||||||||||||| ||||||    
T  18966673 ctgacaatgatgagatgaggaaga-tgattcttgaagagagtcacagaagtagcttgagtattcatccg 18966740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 19865664 - 19865520
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||  |||   ||||||| ||||||||  | || |||||||| | |    
T  19865664 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagatttcgagttcgaatttgtattcctgatgatgaagagatgaagaaa 19865565  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| | ||||||||||||||| ||||||    
T  19865564 atgattcttgaagagagtcataggagtagcttgagtattcatccg 19865520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 25609140 - 25609309
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||| ||  || ||| ||||||||| |||||||  |||||||| ||| | ||||| || ||||| ||||||||  |||| || ||||| ||    
T  25609140 tcaagtttgtggacttgttggttgctagtaatcagactgaagacggtgattttaagatcgatgaccaaggtgtattgaggtttcgaggtaggatttgtat 25609239  T
Q  117 tcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| ||| | || |||||||| |||| ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  25609240 tccagacgatgaagagatgaagaaga-tgattcttgaagagagtcatagaagtagcttgagtattcatccg 25609309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 22434871 - 22434702
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| |||||| |||||||| ||||| |||||||||||||| ||| |||   ||||||| ||    
T  22434871 tcaagtttgtagacttgttggttgctagtaattagactgaagatggtgacttcaaggtcgatgaccacggtgtgttgagattccgagatcgaatttgtat 22434772  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||   | || || ||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  22434771 tcctgttgatgaagaaatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 22434702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 22443269 - 22443100
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| |||||| |||||||| ||||| |||||||||||||| ||| |||   ||||||| ||    
T  22443269 tcaagtttgtagacttgttggttgctagtaattagactgaagatggtgacttcaaggtcgatgaccacggtgtgttgagattccgagatcgaatttgtat 22443170  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||   | || || ||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  22443169 tcctgttgatgaagaaatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 22443100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 15897067 - 15896928
Alignment:
Q  46 aatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattg 144  Q
    ||||| ||||||| | |||| || ||||||||||| || || |||||| | ||  ||||||||||| | ||||||||| | ||||||||||| |||| ||    
T  15897067 aatcagactgaagatagtgactttaaggttgatgatcagggagtgttgcgattacgaggcagaattcgtattcctgacgatgatgagatgaagaaga-tg 15896969  T
Q  145 attttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||| |  |||| |||||||  |||| |||||||||||||||    
T  15896968 attcttaaagagagtcacacaagtatcttgagtatccatcc 15896928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 20636582 - 20636749
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||| ||||||||  ||||||| ||  | ||||| || ||||||||||||||  |||| || ||||  ||||    
T  20636582 aagtttgtggacttgttggttgctagtaatcagactgaaggcagtgattttaaaatcgatgatcaaggtgtgttgaggtttcgaggtaggatttttattc 20636681  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||| | ||||||||||| | | ||||| | ||||| ||||| |  |||| ||||||||| ||||||    
T  20636682 cagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtattcatccg 20636749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 5838498 - 5838660
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||||||  |  | | ||||||||| ||||||| ||||||||| ||||| ||||| || |||||||| || |||  |||   |||||| ||    
T  5838498 tcaagtttgtggatttgttagtcgctagtaatcagactgaagatggtgattttaaggtcgatgaccatggtgtgttaagattccaaggtcaaatttgtat 5838597  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     |||||||| || |||||||| | | ||||| | || || ||||| |  ||||||||||||||    
T  5838598 ccctgacaatgaagagatgaagaaaatgattctcgaggagagtcatagaagtagcttgagtat 5838660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 16926919 - 16927081
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| |||||| || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  16926919 tcaagtttgtagacttgttggttgctagtaattagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 16927018  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| | |  |||||||  | | ||||| | ||||| |||||||  ||||||||||||||    
T  16927019 tcctgacgatgcagagatgaggaaaatgattcttgaagagagtcacagaagtagcttgagtat 16927081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 16962724 - 16962893
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || || || ||||| || || |||||||| ||| ||||  | ||||||||    
T  16962724 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggcgtgttgagattccgaggtcggatttgcat 16962823  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| | |  |||||||  | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  16962824 tcctgacgatgcagagatgaggaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 16962893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 20634428 - 20634469
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  20634428 tatttctggtagtggtattgcagtagatccgtctaaagttga 20634469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 23080251 - 23080218
Alignment:
Q  208 gtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||||||||||||||| ||||||||||||||    
T  23080251 gtggtattgcagtagatccctctaaagttgatgt 23080218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 25608349 - 25608390
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  25608349 tatttctggtagtggtattgcagtagatccgtctaaagttga 25608390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 27566327 - 27566428
Alignment:
Q  85 ggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||||||||||| ||| ||||  | ||||||||||||||| | |  |||||||| | | ||||| | ||||| ||||| || |||||||||||||| ||||    
T  27566327 ggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaaaatgattcttgaagagagtcataaaagtagcttgagtattcatc 27566426  T
Q  185 cg 186  Q
    ||    
T  27566427 cg 27566428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 18965795 - 18965827
Alignment:
Q  209 tggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| |||||||||||||||||||||||||    
T  18965795 tggtattacagtagatccatctaaagttgatgt 18965827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 23086244 - 23086276
Alignment:
Q  208 gtggtattgcagtagatccatctaaagttgatg 240  Q
    |||||||||| ||||||||||||||||||||||    
T  23086244 gtggtattgcggtagatccatctaaagttgatg 23086276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 32814 - 32983
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  32814 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 32913  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  32914 tcctgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 32983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 56082 - 56206
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||| ||||| || ||||| ||||| |||||||| |||||||| ||||||||||| |||||| ||||||  |||||||| |||||||||||    
T  56082 gtgacttcaaggtggatgatcagggtgtattgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtca 56181  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  56182 caagagtagcttgagtattcatccg 56206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 19613803 - 19613634
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  19613803 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 19613704  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  19613703 tcctgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 19613634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 19148339 - 19148171
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||    
T  19148339 tcaagtttgtgggtttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatgatcagggtatgttgaggttcagaggaagaatttgcat 19148240  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| || |||||  ||||||  |||||||| |||||||||||||  | |||||| ||||| |||||    
T  19148239 tcctgataatgatgatttgaaaaagttgattttagaagaaagtcacataaatagcttaagtattcatcc 19148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 20747738 - 20747570
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||    
T  20747738 tcaagtttgtgggtttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatgatcagggtatgttgaggttcagaggaagaatttgcat 20747639  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| || |||||  ||||||  |||||||| |||||||||||||  | |||||| ||||| |||||    
T  20747638 tcctgataatgatgatttgaaaaagttgattttagaagaaagtcacataaatagcttaagtattcatcc 20747570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 11387549 - 11387718
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||  |||||||||| |||| | | |||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  11387549 tcaagtttgtggatttaatggttactagtaatcaagctgaggatagtgatttcaaggttgatgaacaaggcgtgttgaggttcagaggcagaatttgtat 11387648  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||| ||||||  || ||||| || ||||| |||| ||||| ||| ||||||||||||    
T  11387649 tcctgataatgatgagttgaaaaagttaattttagaggaaagccacaggagtaacttaagtatccatccg 11387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 15101724 - 15101893
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||| | ||||| ||| ||||| ||||| | ||||||| | |||| |||||||||||||| || |||||| ||||||||||||| |||||||| ||    
T  15101724 tcaagtttattgatttgatggttgttggtaatgacactgaagatagtgacttcaaggttgatgatcagggtgtgctgaggttcagaggaagaatttgtat 15101823  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| ||||||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||||    
T  15101824 tcctgataacgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatccg 15101893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 16949595 - 16949755
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||||||||| || ||||| | ||||| | | |||| |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||    
T  16949595 aagtttgttgatttaatgattattggtaatgacactgaggatagtgacttcaaggttgatgatcagggtgttttgagatttagaggaagaatttgtattc 16949694  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    || |||| |||||| ||||||  |||||||| |||||||||||||||||||||||||||||    
T  16949695 ctaacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtat 16949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 16071416 - 16071584
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| |||||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  16071416 tcaagtttgttgatttaatggttgctagtaatcaagctgaagatggtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 16071515  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || ||| || |||||  | ||||| |||||||| || ||||| || |  |||||||| ||||| ||||||    
T  16071516 tcatgataatgatgatttaaaaag-ttgattttagaggaaagccatagaagtagcttaagtattcatccg 16071584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 12205923 - 12206090
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || | | ||| || |||||||||| | |||| |||||||||||||| || ||||||||||| ||| |||| |||||||| ||||    
T  12205923 aagtttgtggatttgttggtggctagcaaccaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgaggaagaatttgtattc 12206022  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||| ||||||| |||||||| |||||||||||||  |||||||| ||||| ||||||    
T  12206023 ctgataatgatgagttgaaaaggttgattttagaagaaagtcacagaagtagcttaagtattcatccg 12206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 14285542 - 14285665
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| || ||||| ||||||||||| |||||| ||||||  |||||||| || ||||||||    
T  14285542 gtgacttcaaggttgatgatcagggtgtgttgagattcagagggaggatttgtattcctgacaatgatgagttgaaaaagttgattttagaggaaagtca 14285641  T
Q  162 caagagtagcttgagtatccatcc 185  Q
    |||||||||||||||||| |||||    
T  14285642 caagagtagcttgagtattcatcc 14285665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 573 - 697
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||  ||||||||||| | | |||||| ||||||||||| |||||| ||||||  |||||||| |||||||||||    
T  573 gtgacttcaaggttgatgatcagggtgttatgaggttcagaagaaaaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtca 672  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  673 caagagtagcttgagtattcatccg 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 14263365 - 14263511
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||| || ||||||||| ||  ||||||| ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  14263365 tcaagttcgttgatttaatggttactagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 14263464  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcaca 163  Q
    |||||| |  |||||  ||||||  |||||||| || ||||||||||    
T  14263465 tcctgatagtgatgatttgaaaaagttgattttagaggaaagtcaca 14263511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 14434784 - 14434650
Alignment:
Q  52 actgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttgg 151  Q
    ||||||| | |||| |||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||| || ||  ||||||  || ||||| |    
T  14434784 actgaagatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttag 14434685  T
Q  152 aagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | |||||||||||||||||||||||||| ||||||    
T  14434684 aggaaagtcacaagagtagcttgagtattcatccg 14434650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 12456785 - 12456668
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||  | ||||||||||| |||||||| ||||||||||| |||||| ||||||  |||||||| |||||||||||    
T  12456785 gtgacttcaaggttgatgatcagggtgttctaaggttcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtca 12456686  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  12456685 caagagtagtttgagtat 12456668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 13666612 - 13666496
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || | |||||||||||||||||| |||||||| |||||||| || |||||  ||||||  || ||||| || ||||||||||||||||    
T  13666612 aaggttgatgatcaggatgtgttgaggttcagaggaagaatttgtattcctgataatgatgatttgaaaaagttaattttagaggaaagtcacaagagta 13666513  T
Q  170 gcttgagtatccatccg 186  Q
    |||| ||||| ||||||    
T  13666512 gcttaagtattcatccg 13666496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 15341514 - 15341390
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || || || ||||| |||||||| |||||||| ||||||||||| || ||  ||||||  || ||||| ||||||| |||    
T  15341514 gtgacttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaagaaattca 15341415  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  15341414 caagagtagcttgagtattcatccg 15341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 18053119 - 18053243
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || || || || ||||||||    
T  18053119 gtgacttcaaggttgatgaacagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcttagaggaaagtca 18053218  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  18053219 taagagtagcttaagcattcatccg 18053243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 12457723 - 12457606
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||| ||||| ||| |||| |||||||||||||||||  |||| |  |||||| | || || |||||    
T  12457723 gtgattttaaggttgatgaccaaggtgtgctgaggtttagaggaagagtttgtattcctgacaacgatgatttgaagaagttgattcttgaggagagtca 12457624  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  12457623 caagagtaggttgagtat 12457606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 15153825 - 15153969
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||  | ||||| || ||||||||||||||  |||| || ||||| ||||| ||| | ||||||||||| | |    
T  15153825 tagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgaggtttcgaggtaggatttgtattccagacgatgatgagatgaagaaa 15153924  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| | ||||||||||||||||||||||    
T  15153925 atgattcttgaagagagtcataggagtagcttgagtatccatccg 15153969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 15625595 - 15625510
Alignment:
Q  101 gaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||| |||| | |||||||||||||  |||||||||||||| ||||||    
T  15625595 gaggcagaatttgtattcctgacaatgatgagatgaagaagat-gattcttgaagaaagtcacagaagtagcttgagtattcatccg 15625510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 11305429 - 11305546
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||  ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  11305429 gtgatttcaaagttgatgatcaaggtgtactgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 11305528  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  11305529 caagagtagtttgagtat 11305546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 13022440 - 13022323
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||||||| |||| || |||||  ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||    
T  13022440 gtgacttcaaggtttatgatcagggtgttctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtca 13022341  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  13022340 caagagtaggttgagtat 13022323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 15204721 - 15204577
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aag 140  Q
    ||||||| | ||||||| | |||| |||||||| ||||| || ||  ||||||| ||| ||||||||||||| ||||||||| | || ||||| || |||    
T  15204721 tagtaattagactgaagatagtgacttcaaggtcgatgatcagggaatgttgagattccgaggcagaatttgtattcctgacgatgaagagataaagaag 15204622  T
Q  141 attgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||||| | ||||| |||||||| |||||||||||||| ||||||    
T  15204621 a-tgattcttgaagagagtcacaaaagtagcttgagtattcatccg 15204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 49153384 - 49153267
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||  ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  49153384 gtgatttcaaagttgatgatcagggtgttctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 49153285  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  49153284 caagagtaggttgagtat 49153267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 321205 - 321348
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||||||   ||||||| ||  ||||||| || ||||||||||| ||| |||  |||||||| ||||| ||| | ||||||||||| | |    
T  321205 tagtaatcagactgaagacagtgattttaaaattgatgatcaaggtgtgttgagattccgagatagaatttgtattccagacgatgatgagatgaagaaa 321304  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
     ||||| | ||||||||| | |  ||||||||||||||||||||    
T  321305 atgattcttgaagaaagtgatagaagtagcttgagtatccatcc 321348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 11771386 - 11771546
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| | ||||||| ||  | ||||| || || ||| |||| ||  ||||||||||||| ||||    
T  11771386 aagtttgtggacttgttgattgctagtaatcagactgaagatagtgattttaaaatcgatgatcaaggcgtggtgagatttcgaggcagaatttgtattc 11771485  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||| | ||||||||||| |||| ||||| | ||||| ||||| |  ||||||||||||||    
T  11771486 ctgacgatgatgagatgaagaaga-tgattcttgaagagagtcatagaagtagcttgagtat 11771546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 26117771 - 26117888
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| | | |||| |||||||| || || ||| |||| |  |||||| | || || |||||    
T  26117771 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggtaaagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtca 26117870  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  26117871 caagagtaggttgagtat 26117888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 11770593 - 11770636
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  11770593 tatttctggtagtggtattgcagtagatccatctaaagttgatg 11770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 14040820 - 14040653
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||  || ||||||||||||| ||||||| | ||||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||    
T  14040820 aagtttgtagatttgttggttgttagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattc 14040721  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | |||   ||||||||||| | | ||| | | ||||| ||||| |  ||||| |||||||| ||||||    
T  14040720 cagacgctgatgagatgaagaaaatgaatcttgaagagagtcatagaagtagtttgagtattcatccg 14040653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 14350850 - 14350683
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||  || ||||||||||||| ||||||| | ||||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||    
T  14350850 aagtttgtagatttgttggttgttagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattc 14350751  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | |||   ||||||||||| | | ||| | | ||||| ||||| |  ||||| |||||||| ||||||    
T  14350750 cagacgctgatgagatgaagaaaatgaatcttgaagagagtcatagaagtagtttgagtattcatccg 14350683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 13967834 - 13967951
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| || |||||||| || |||||| ||||||||||||| ||| |||| |||| |||||  |||||  |||| |  |||||| | || || |||||    
T  13967834 gtgattttaaagttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcttgacagtgatgatttgaagaatttgattctcgaggagagtca 13967933  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  13967934 caagagtaggttgagtat 13967951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 14955622 - 14955519
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| ||||| || ||||| || |||| ||||| | ||||| ||||||| ||||||||||    
T  14955622 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaaga-tgattcttgaagagagtcacaggagtagcttg 14955524  T
Q  175 agtat 179  Q
    |||||    
T  14955523 agtat 14955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 18178810 - 18178707
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || ||||||||||| ||| |||| |||||||||||||| ||||| || ||||| || |||| ||||| | ||||||||||| |  |||||||||    
T  18178810 gatgatcaaggtgtgttgagattccgaggaagaatttgcattccagacaatgaagagattaagaaga-tgattcttgaagaaagtcatagaagtagcttg 18178712  T
Q  175 agtat 179  Q
    |||||    
T  18178711 agtat 18178707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 14262574 - 14262617
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||    
T  14262574 tatttctagtagtggtattgcagttgatccatcaaaagttgatg 14262617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 23505041 - 23505160
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    |||||||||||||| || |||||| | || |||||||| |||||||| |||||||| || || || |||||||  || ||  | || |||||||| ||||    
T  23505041 ttcaaggttgatgatcagggtgtgctaagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 23505140  T
Q  167 gtagcttgagtatccatccg 186  Q
    ||||||| || || ||||||    
T  23505141 gtagcttaagcattcatccg 23505160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 14130902 - 14130832
Alignment:
Q  116 ttcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||| || ||  ||||||  || ||||| || |||||||||||||||||||||||||| ||||||    
T  14130902 ttcctgacaatgaagaattgaaaaagttaattttagaggaaagtcacaagagtagcttgagtattcatccg 14130832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 14041602 - 14041570
Alignment:
Q  208 gtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||||||||||||||| |||||||||||||    
T  14041602 gtggtattgcagtagatccctctaaagttgatg 14041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 14351632 - 14351600
Alignment:
Q  208 gtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||||||||||||||| |||||||||||||    
T  14351632 gtggtattgcagtagatccctctaaagttgatg 14351600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 27364753 - 27364922
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  27364753 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 27364852  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  27364853 tcctgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 27364922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 23277543 - 23277376
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||| || ||||| ||| ||||| ||||| ||||||||| | ||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||    
T  23277543 aagttcgttgatttgatggttgttggtaatgaaactgaagatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattc 23277444  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||  ||||||  || ||||| || |||||||||||||||||||||||||| ||||||    
T  23277443 ctgataatgatgatttgaaaaagttaattttagaggaaagtcacaagagtagcttgagtattcatccg 23277376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 23099692 - 23099813
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||||||| || ||  |||||||||| |||| | | |||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  23099692 tcaagtttgtggatttattggttactagtaatcaagctgaggctagtgatttcaaggttgatgaacaaggcgtgttgaggttcagaggcagaatttgtat 23099791  T
Q  117 tcctgacaacgatgagatgaaa 138  Q
    |||||| || |||||| |||||    
T  23099792 tcctgataatgatgagttgaaa 23099813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 19651771 - 19651895
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||| ||||| |  ||||| ||||| |||||||| |||||||||||||||||||| |||||| ||||||  |||||||| |||||||||||    
T  19651771 gtgacttcaaggtggatgatcggggtgtattgagattcagaggaagaatttgcattcctgacaatgatgagttgaaaaagttgattttagaagaaagtca 19651870  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||| ||| ||||||    
T  19651871 caagagtagcttgaatattcatccg 19651895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 23294702 - 23294535
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||||||| ||| | ||||| || |||| | | |||| |||||||||||||| || ||||||||||| |||||||| |||||||||||||    
T  23294702 aagtttgtggatttaatggttgctggtaatgaagctgaggatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattc 23294603  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||  | ||| |  ||||||  || ||| | || |||||||||||||||||||||| ||| ||||||    
T  23294602 ctgatgatgataatttgaaaaagttaattctagaggaaagtcacaagagtagcttgaatattcatccg 23294535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 23111503 - 23111349
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || ||| |||||||||||||  || |||||| |||||||||||||| || ||| ||||||| ||| |||||||||||| |||||    
T  23111503 aagtttgtggatttgttggttgctagtaatcaaactagagatggtgacttcaaggttgatgatcagggtatgttgagattctgaggcagaattttcattc 23111404  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 173  Q
     |||||  |||||| ||||||  |||||||| || ||||||||||  ||||||||    
T  23111403 ttgacagtgatgagttgaaaaagttgattttagaggaaagtcacataagtagctt 23111349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 20828983 - 20828866
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  20828983 gtgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 20828884  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  20828883 caagagtaggttgagtat 20828866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 20833709 - 20833592
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  20833709 gtgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 20833610  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  20833609 caagagtaggttgagtat 20833592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 31831382 - 31831265
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||||||||||||||||| ||| |||| ||||||||||| || ||| | || |  |||||| | || || |||||    
T  31831382 gtgatttcaaagttgatgatcagggtgtgttgaggttcagaggtagagtttgtattcctgacaatgaggagttaaagaagttgattcttgaggagagtca 31831283  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  31831282 caagagtaggttgagtat 31831265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 21324940 - 21325102
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  |||||| ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  21324940 tcaagtttgtagacttgttgattgctagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 21325039  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||  | || |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  21325040 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtat 21325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 24676258 - 24676089
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||| ||||||| ||    
T  24676258 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggccgaatttgtat 24676159  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||  | || |||||||| | | ||||| | ||||| ||||| |  |||||| ||||||| ||||||    
T  24676158 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcctgagtattcatccg 24676089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 27209846 - 27210015
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||| ||| ||  |||||||||  ||||   | ||||||||||| ||||||| || ||||||||||| || ||||||| ||| || ||    
T  27209846 tcaagtttgtggattttatggttactagtaatcaggctgagaatagtgatttcaagattgatgagcaaggtgtgttgagatttagaggcaaaatctgtat 27209945  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||  | ||  |||| |  ||||| || ||||||||||| ||||| | ||||||||| ||||||    
T  27209946 tcctgacaataaagaattgaagaagttgatattagaagaaagtcataagagcaacttgagtattcatccg 27210015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 24819362 - 24819529
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || ||| ||||||||  ||||||| | |||| ||||| || ||||| || || |||||||| ||| |||| |||||||| ||||    
T  24819362 aagtttgtggatttgttggttgctagtaatccgactgaagatagtgacttcaaagtcgatgatcaaggagtgttgagattctgaggtagaatttgtattc 24819461  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||| | ||||||||||| |||| ||| | |  |||| |||||||  |||||||||||||||||||||    
T  24819462 cagacgatgatgagatgaagaaga-tgactcttaaagagagtcacagaagtagcttgagtatccatccg 24819529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 27788465 - 27788341
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  27788465 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 27788366  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  27788365 taagagtagcttaagcattcatccg 27788341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 24949314 - 24949191
Alignment:
Q  62 gtgatttcaaggttgatgaacacggt-gtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtc 160  Q
    |||| |||||||||||||| || ||| ||| |||| |||||||| ||||||||||||||| |  | ||||   ||||||  |||||||| || |||||||    
T  24949314 gtgacttcaaggttgatgatcatggttgtgatgagattcagaggaagaatttgcattcctcatgatgatggtttgaaaaagttgattttagaggaaagtc 24949215  T
Q  161 acaagagtagcttgagtatccatc 184  Q
    ||||||||||||| ||||| ||||    
T  24949214 acaagagtagcttaagtattcatc 24949191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 21890417 - 21890559
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||||||| |||||||| ||  | ||||| || ||||||||||||||  |||| || ||||| ||||  ||| ||||||||||||| | |    
T  21890417 tagtaatcagactgaaggaggtgattttaaaatcgatgatcaaggtgtgttgaggtttcgaggtaggatttgtattctagacgacgatgagatgaagaaa 21890516  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
     ||||| | ||||| ||||| |  |||||||||||||| ||||    
T  21890517 atgattcttgaagagagtcatagaagtagcttgagtattcatc 21890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 1064475 - 1064358
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||| |||| || ||| |||| |  |||||| | || || |||||    
T  1064475 gtgatttcaaagttgatgatcagggtgtactgaggttcagaggtagagtttgtattcctaacaatgaagagttgaagaagttgattcttgaggagagtca 1064376  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  1064375 caagagtagtttgagtat 1064358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 24876482 - 24876592
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| ||||| || ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  24876482 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 24876580  T
Q  175 agtatccatccg 186  Q
    ||||| ||||||    
T  24876581 agtattcatccg 24876592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 22756139 - 22756301
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  22756139 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 22756238  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||  | || |||||||| | | | ||| | ||||| ||||| |  ||||||||||||||    
T  22756239 tcctgatgatgaagagatgaagaaaataattcttgaagagagtcatagaagtagcttgagtat 22756301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 24707177 - 24707261
Alignment:
Q  38 ttgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctga 122  Q
    ||||||||||||| ||||||| |||||| || || || ||||| || ||||||||||| ||| ||||  ||||||| ||||||||    
T  24707177 ttgttagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcgaatttgtattcctga 24707261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 23073423 - 23073380
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || ||||||||||||||||||| |||||||||||||    
T  23073423 tatttctggtagtggtattgcagtagatccgtctaaagttgatg 23073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 41607268 - 41607309
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    
T  41607268 tatttctagtgatggtattgcagtggatccgtctaaagttga 41607309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 21144717 - 21144884
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||| || ||| |||  |||| |||||||   ||||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||    
T  21144717 aagtttgtggacttattggttgctagagatcagactgaagacagtgattttaaaatcgatgatcaaggtgtgttgagattccgagggagaatttgtattc 21144816  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||||| || ||||| || |||| ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  21144817 cagacaatgaggagattaagaaga-tgattcttgaagagagtcatagaagtagcttgagtattcatccg 21144884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 24819113 - 24819157
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||| || |||||||||||||||||||||||    
T  24819113 tatttctggtagtggtatcgcggtagatccatctaaagttgatgt 24819157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 113728 - 113559
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||| |||||||||||||| ||  ||||||||||||||||| | |||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||    
T  113728 tcaagcttgtggatttaatggttaatagtaatcaaactgaagatagtgattgcaaggttgatgaacacggtgtgttgagattcggaggcagaatttgtat 113629  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  113628 tcttgacaacgatgagatgaaaaggctgattttggaagaaagtcacaagaatagcttgagtatccatccg 113559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 95135 - 95308
Alignment:
Q  13 gacatcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaattt 112  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||| |||||||||||| |||||||| || ||||| ||||| || ||||| |||||||    
T  95135 gacatcaagtttgtggatttaatggttgatagtaatcaagctgaagatggtgatttcaaagttgatgagcaaggtgtattgagatttagaggtagaattt 95234  T
Q  113 gcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |  |||| ||||| || ||  | || |  || ||||| ||||||||||| ||||| |  |||||||| ||||||    
T  95235 gtgttcccgacaatgaagaattaaagaagttaattttagaagaaagtcataagagcaatttgagtattcatccg 95308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 21680094 - 21680263
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  21680094 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 21680193  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21680194 tcctgacaacgatgagataaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 21680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 21890075 - 21890244
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| ||||||||||||| ||  | |||| |||||||||| ||| || |||||||||||||||||||| |||||||||||    
T  21890075 tcaagtttgtcgatttaatggttgctagtaatcaaactaaatatagtgacttcaaggttggtgatcagggtgtgttgaggttcagaggaagaatttgcat 21890174  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| |  |||||| ||||||  |||| |||||||||||| ||||| |||||||| ||||| ||||||    
T  21890175 tcctgatagtgatgagttgaaaaagttgagtttggaagaaagccacaaaagtagctttagtattcatccg 21890244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 21497100 - 21496957
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||| ||||||||| |||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||| | || |||||  ||||||      
T  21497100 tagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctaataaggatgatttgaaaaag 21497001  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||||| |||||||||||||  |||||||| ||||| |||||    
T  21497000 ttgattttagaagaaagtcacagaagtagcttaagtattcatcc 21496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 24619613 - 24619780
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||| | ||||| | ||||| | | | ||||||||||||||||  || |||||  ||||||||||||| |||||||| ||||    
T  24619613 aagtttgttgatttgatggttgctggtaatgacactgaggatagcgatttcaaggttgatgttcagggtgttctgaggttcagaggaagaatttgtattc 24619712  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| |||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||    
T  24619713 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccg 24619780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 24715844 - 24716011
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||| | ||||| | ||||| | | | ||||||||||||||||  || |||||  ||||||||||||| |||||||| ||||    
T  24715844 aagtttgttgatttgatggttgctggtaatgacactgaggatagcgatttcaaggttgatgttcagggtgttctgaggttcagaggaagaatttgtattc 24715943  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| |||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||    
T  24715944 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccg 24716011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 24748872 - 24749039
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||| | ||||| | ||||| | | | ||||||||||||||||  || |||||  ||||||||||||| |||||||| ||||    
T  24748872 aagtttgttgatttgatggttgctggtaatgacactgaggatagcgatttcaaggttgatgttcagggtgttctgaggttcagaggaagaatttgtattc 24748971  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| |||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||    
T  24748972 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccg 24749039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 21831102 - 21831246
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||||||| ||| |||||| |||||||||||||| || ||||||||||| ||| ||||||||||||| || ||||| || |||||| ||||||      
T  21831102 tagtaatcaaactaaagatggtgacttcaaggttgatgatcaaggtgtgttgagattctgaggcagaatttgtatccctgataatgatgagttgaaaaag 21831201  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||| |||||||||||||| ||||| || ||||| ||||||    
T  21831202 ttgattttagaagaaagtcacaaaagtagtttaagtattcatccg 21831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 22463001 - 22462835
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||||||| ||| | |||||||| | ||   | ||||||||||||||||| |||| ||||||||||| || |||||||||||||| ||||    
T  22463001 aagtttgtggatttaatggttgctggtaatcaagcagagaatagtgatttcaaggttgat-aacaaggtgtgttgagatttagaggcagaatttgtattc 22462903  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| || ||  |||| |  |||||||||||||||||||| ||||| | ||||||||| ||||||    
T  22462902 ctgacaatgaagaattgaagaagttgattttggaagaaagtcataagagcaacttgagtattcatccg 22462835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 20774809 - 20774649
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||||||| |||| ||||||||| | || |   ||||||||||||||||||| || ||||||||||| || |||||||||||||| || |    
T  20774809 aagtttgtggatttaatggttgtgagtaatcaagccgaggagagtgatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatcc 20774710  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| || ||  |||| |  |||||||| |||||| |||| ||||| | |||||||||    
T  20774709 ctgacaatgaggaattgaagaagttgattttagaagaaggtcataagagcaacttgagtat 20774649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 20822480 - 20822336
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    |||||||||| |||||| |||||||||||| ||||||||||| ||||| ||||| || ||||||||||||||  |||| ||||| || ||  |||| |      
T  20822480 tagtaatcaagctgaagatggtgatttcaaagttgatgaacaaggtgtattgagatttagaggcagaatttgtgttcccgacaatgaagaattgaagaag 20822381  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||| ||||||||||| |||||||  |||||||| ||||||    
T  20822380 ttgattttagaagaaagtcataagagtaatttgagtattcatccg 20822336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 21563291 - 21563457
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||||||||||| |||||| |||||||||||||| ||  |||||||||| ||| ||  || |||||| ||||    
T  21563291 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatcaacgtgtgttgagattccgacacataatttgtattc 21563390  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    || | ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||    
T  21563391 cttataattatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatcc 21563457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 22235238 - 22235403
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||||| ||||| || |||| | | |||| || ||||| ||||| || | |||||||||||||||||| |||||||| ||||    
T  22235238 aagtttgttgatttgatggttgttggtaatgaagctgaggatagtgactttaaggtcgatgatcaggatgtgttgaggttcagaggaagaatttgtattc 22235337  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
     ||| || || ||| ||||||  || ||||| || |||||||||||||||||||| ||||| ||||    
T  22235338 atgataatgaagagttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatc 22235403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 24797758 - 24797875
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || ||||| |||||||||||||| ||| |||||||||||||||| || ||| |||| |  |||||| | || || |||||    
T  24797758 gtgatttcaaagttgatgatcaaggtgttttgaggttcagaggtagagtttgcattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 24797857  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  24797858 caagagtaggttgagtat 24797875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 37542742 - 37542859
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||||||||||| ||| |||| | ||||||| | || || |||||    
T  37542742 gtgatttcaaagttgatgatcagggtgtactgaggttcagaggtagagtttgtattcctgacaacgaagagttgaagaaattgattcttgaggagagtca 37542841  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  37542842 caagagtaggttgagtat 37542859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 17268695 - 17268819
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  17268695 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 17268794  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    ||||||||||||||| || ||||||    
T  17268795 caagagtagcttgagcattcatccg 17268819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 20343289 - 20343172
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | || || |||||    
T  20343289 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtca 20343190  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  20343189 caagagtaggttgagtat 20343172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 26738045 - 26738210
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| ||||||||| ||  | ||||| || |||| |||||| ||  |||| |||||||| ||||    
T  26738045 aagtttgtggacttgttgattgctagtaatcagactgaagatggtgattttaaaatcgatgatcatggtgcgttgagatttcgaggaagaatttgtattc 26738144  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||||| | ||||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||    
T  26738145 ctgacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatc 26738210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 28894303 - 28894420
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || ||||||||||| || |||||||||||||| || |||||||| || ||  |||| |  |||||||| |||||| ||||    
T  28894303 gtgatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatccctgacaatgaggaactgaagaagttgattttagaagaaggtca 28894402  T
Q  162 caagagtagcttgagtat 179  Q
     ||||| | |||||||||    
T  28894403 taagagcaacttgagtat 28894420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 28915774 - 28915891
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || ||||||||||| || |||||||||||||| || |||||||| || ||  |||| |  |||||||| |||||| ||||    
T  28915774 gtgatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatccctgacaatgaggaactgaagaagttgattttagaagaaggtca 28915873  T
Q  162 caagagtagcttgagtat 179  Q
     ||||| | |||||||||    
T  28915874 taagagcaacttgagtat 28915891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 28923129 - 28923246
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || ||||||||||| || |||||||||||||| || |||||||| || ||  |||| |  |||||||| |||||| ||||    
T  28923129 gtgatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatccctgacaatgaggaactgaagaagttgattttagaagaaggtca 28923228  T
Q  162 caagagtagcttgagtat 179  Q
     ||||| | |||||||||    
T  28923229 taagagcaacttgagtat 28923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 14886352 - 14886469
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || || ||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  14886352 gtgatttcaaagttgatgatcagggggtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 14886451  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  14886452 caagagtaggttgagtat 14886469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 23079455 - 23079567
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    |||||||||||||| || |||||  ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||||| |    
T  23079455 ttcaaggttgatgatcagggtgttctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcacaaaa 23079554  T
Q  167 gtagcttgagtat 179  Q
    |||| ||||||||    
T  23079555 gtagtttgagtat 23079567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 23473088 - 23473045
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  23473088 tatttctggtggtggtattgcagtagatccatctaaagttgatg 23473045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 25849082 - 25848965
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||  ||||||||||||| ||| | || ||||||||||| |||||| |||| |  |||||| | || || |||||    
T  25849082 gtgattttaaggttgatgatcagggtgttctgaggttcagaggaagagtatgtattcctgacaatgatgagttgaagaagttgattcttgatgatagtca 25848983  T
Q  162 caagagtagcttgagtat 179  Q
     |||||||| ||||||||    
T  25848982 taagagtaggttgagtat 25848965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 179
Target Start/End: Complemental strand, 22503685 - 22503569
Alignment:
Q  63 tgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcac 162  Q
    |||||| ||||||||||| || |||||  ||||||||||||| ||| | || ||||||||||| |||||| |||| |  |||||| | || || |||||     
T  22503685 tgattttaaggttgatgatcagggtgttctgaggttcagaggaagagtatgtattcctgacaatgatgagttgaagaagttgattcttgaggagagtcat 22503586  T
Q  163 aagagtagcttgagtat 179  Q
    |||||||| ||||||||    
T  22503585 aagagtaggttgagtat 22503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 23517596 - 23517434
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||| || ||| ||||||||| || |||| |||||| || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  23517596 tcaagtttgtagacttattggttgctagtaatcagacagaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 23517497  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |||| |  | || |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  23517496 tcctaaagatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtat 23517434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 18776840 - 18776671
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| |||||  || ||| ||||||||| |||||||  | ||| || || || || || |||||||||||||| ||| ||||  | ||||||||    
T  18776840 tcaagtttgtagatttgttggttgctagtaatcagactgaagacgatgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttgcat 18776741  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| | |  |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  18776740 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 18776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 23441280 - 23441111
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  23441280 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 23441181  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |||| | || |||||||| | | ||||| | || || ||||| |  |||||||||||||| ||||||    
T  23441180 tcgtgacgatgaagagatgaagaaaatgattcttgaggagagtcatagaagtagcttgagtattcatccg 23441111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 23574799 - 23574694
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| | ||| | ||||||||| ||||| ||||| || ||||||||||| ||| ||||| ||||||| ||    
T  23574799 tcaagtttgtagacttgttggttgctagtaatcagattgaggatggtgattttaaggtcgatgaccatggtgtgttgagattccgaggccgaatttgtat 23574700  T
Q  117 tcctga 122  Q
    ||||||    
T  23574699 tcctga 23574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 20800518 - 20800398
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || || || ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  20800518 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 20800419  T
Q  117 tcctgacaacgatgagatgaa 137  Q
    ||||||| | || ||||||||    
T  20800418 tcctgacgatgaagagatgaa 20800398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 22234445 - 22234489
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||    
T  22234445 tatttctagtagtggtattgcagttgatccatcgaaagttgatgt 22234489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 20467415 - 20467582
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||| | |||| | | ||||| ||||||| | |||| || ||||| ||||| || || |||||| | ||  |||||| |||||| ||||    
T  20467415 aagtttgtagatttatttattggtggaaatcagactgaagatagtgactttaaggtcgatgatcagggagtgttgcgatttcgaggcaaaatttgtattc 20467514  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||  | ||||||||||| |||| ||||| | ||||| ||| |||  |||||||||||||| ||||||    
T  20467515 ctgatgatgatgagatgaagaaga-tgattcttgaagagagtaacagaagtagcttgagtattcatccg 20467582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 14087440 - 14087271
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  14087440 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 14087341  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  14087340 tccagacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 14087271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 13971485 - 13971651
Alignment:
Q  20 agtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcc 119  Q
    ||||||||||||||||  ||  |||||||||| |||| | | |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13971485 agtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcattcc 13971584  T
Q  120 tgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  13971585 cgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 13971651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 14574690 - 14574521
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||| | ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  14574690 tcaagtttgttgatttgatggttgctggtagtgaaactgaagatagtgacttcaaggttgatgatcatggtgtgttgaggttcagaggaagaatttgcat 14574591  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| |  |||||| ||||||  |||||| | ||||||||||||||||||||||| ||||| ||||||    
T  14574590 tcctgatagtgatgagttgaaaaagttgattctagaagaaagtcacaagagtagcttaagtattcatccg 14574521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 10419407 - 10419575
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| |||||||||| |||| | |||||||||||| ||||||||||| ||||| ||||| || ||||||||||||||  |    
T  10419407 tcaagtttgtggatttaatggttgatagtaatcaagctgaggatggtgatttcaaagttgatgaacaaggtgtattgagatttagaggcagaatttgtgt 10419506  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||| ||||| || ||  |||| |  |||||||| ||||||||||| |||||||  |||||||| |||||    
T  10419507 tcccgacaatgaagaattgaagaagttgattttagaagaaagtcataagagtaatttgagtattcatcc 10419575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 18133710 - 18133876
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||  |||| ||||||||| ||||| ||||||| | | |||| || ||||||||||| || |||||||| ||||||||||| |||||| | ||||    
T  18133710 aagtttgttcatttgatgattgttggtaatgaaactgaggatagtgactttaaggttgatgatcagggtgtgttaaggttcagaggaagaattagtattc 18133809  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||| || || ||| ||||||  || ||||||||||||||||||||||||||||| ||||| |||||    
T  18133810 ctgataatgacgagttgaaaaagttaattttggaagaaagtcacaagagtagcttaagtattcatcc 18133876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 13299889 - 13300046
Alignment:
Q  22 tttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 121  Q
    ||||| ||||||||||||| | || || |||||||   | ||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||    
T  13299889 tttgttgatttaatgattgctggttatgaaactgagaatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctg 13299988  T
Q  122 acaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |  | ||||   ||||||  |||||||| || ||||||||||||||||||||||||||    
T  13299989 atgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagcttgagtat 13300046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 13310547 - 13310704
Alignment:
Q  22 tttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 121  Q
    ||||| ||||||||||||| | || || |||||||   | ||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||    
T  13310547 tttgttgatttaatgattgctggttatgaaactgagaatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctg 13310646  T
Q  122 acaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |  | ||||   ||||||  |||||||| || ||||||||||||||||||||||||||    
T  13310647 atgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagcttgagtat 13310704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 16380325 - 16380459
Alignment:
Q  52 actgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttgg 151  Q
    ||||||| | |||| |||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||| || ||  ||||||  || ||||| |    
T  16380325 actgaagatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttag 16380424  T
Q  152 aagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | |||||||||||||||||||||||||| ||||||    
T  16380425 aggaaagtcacaagagtagcttgagtattcatccg 16380459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 13319869 - 13320026
Alignment:
Q  22 tttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 121  Q
    ||||| ||||||||||||| | || || |||||||   | ||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||    
T  13319869 tttgttgatttaatgattgctggttatgaaactgagaatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctg 13319968  T
Q  122 acaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |  | ||||   ||||||  |||||||| || ||||||||||||||||| ||||||||    
T  13319969 atgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagattgagtat 13320026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 31694593 - 31694717
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||  | || ||  ||||||  |||||||| || ||||||||    
T  31694593 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattcctgatgatgacgaattgaaaaagttgattttagaggaaagtca 31694692  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  31694693 caagagtagcttgagtattcatccg 31694717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 15228414 - 15228247
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || | | |||||| |||||||||| | |||| |||||||||||||| || ||||||||||| ||| |||  |||||||  ||||    
T  15228414 aagtttgtggatttgttggtggctagtaaccaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgagtaagaatttctattc 15228315  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||||    
T  15228314 ctgataatgatgagttgaaaacgttgattttagaagaaagtcacagaagtagcttaagtattcatccg 15228247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 17493397 - 17493235
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||| | | ||||||| | |||| || ||||||||||| || |||||||||||||| ||||| |||||||| ||    
T  17493397 tcaagtttgttgatttgatggttgctggtagtgacactgaagatagtgacttaaaggttgatgatcagggtgtgttgaggtttagaggaagaatttgtat 17493298  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |||||| || || ||| ||||||  |||||||| || |||||||||||||||||||| |||||    
T  17493297 tcctgataatgacgagttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtat 17493235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 31939625 - 31939501
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||  | || ||  ||||||  |||||||| || ||||||||    
T  31939625 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattcctgatgatgacgaattgaaaaagttgattttagaggaaagtca 31939526  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||| ||||||||||||| ||||||    
T  31939525 caagggtagcttgagtattcatccg 31939501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 16827565 - 16827732
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||| |  ||| |||||||||||||| || |||||||||||||||||||| | |||||| ||    
T  16827565 tcaagtttgttgatttgatggttgctagtaatgaaactgaagataatgacttcaaggttgatgatcaaggtgtgttgaggttcagaggaaaaatttgtat 16827664  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    || ||| || |||||  ||||||  |||||||| || ||||  ||||| |||||||| ||||| ||||    
T  16827665 tcatgataatgatgatttgaaaaagttgattttagaggaaacccacaaaagtagcttaagtattcatc 16827732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 11303188 - 11303302
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||||| ||||||||||| ||||||||||||||||| || |||||  | ||||| |||| ||| || ||||| ||||||||||    
T  11303188 aaggttgatgatcagggtgtgttaaggttcagaggaagaatttgcattcctgataatgatgatttcaaaaggttgagtttagaggaaaggcacaagagta 11303287  T
Q  170 gcttgagtatccatc 184  Q
    |||||||||| ||||    
T  11303288 gcttgagtattcatc 11303302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 15234282 - 15234128
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || | | |||||| |||||||||| | |||| |||||||||||||| || ||||||||||| ||| |||  |||||||  ||||    
T  15234282 aagtttgtggatttgttggtggctagtaaccaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgagtaagaatttctattc 15234183  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 173  Q
    |||| || |||||| ||||||  |||||||| |||||||||||||  ||||||||    
T  15234182 ctgataatgatgagttgaaaacgttgattttagaagaaagtcacagaagtagctt 15234128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 47124666 - 47124549
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||||||||||||||||| ||| |||||||||||||||| || ||| |||| |  |||||| | || || |||||    
T  47124666 gtgatttcaaagttgatgatcagggtgtgttgaggttcagaggtagagtttgcattcctgacaatgaggagttgaagaagttgattcttgaggagagtca 47124567  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  47124566 caagagtaggttgagtat 47124549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 16329067 - 16329184
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||| |||| |  |||||| | || || |||||    
T  16329067 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgagttgaagaagttgattcttgaggagagtca 16329166  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  16329167 caagagtaggttgagtat 16329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 12359891 - 12359994
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||||| |||||   ||||| | | |||| |||||||||||||| || ||||||||||| |||||||| |||||||||||||    
T  12359891 aagtttgttgatttaatggttgttggtaatggcactgaggatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattc 12359990  T
Q  119 ctga 122  Q
    ||||    
T  12359991 ctga 12359994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 10384690 - 10384573
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  10384690 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 10384591  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  10384590 caagagtaggttgagtat 10384573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 28755040 - 28754923
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  28755040 gtgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 28754941  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  28754940 caagagtaggttgagtat 28754923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 4679160 - 4679036
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  4679160 gtgacttcaaggttgatgaacagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 4679061  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  4679060 taagagtagcttaagcattcatccg 4679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 8758489 - 8758613
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  8758489 gtgacttcaaggttgatgaacagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 8758588  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  8758589 taagagtagcttaagcattcatccg 8758613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 41178244 - 41178120
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||||||||||||||| |||||||||||  ||||||| |||||||| |||||||| || || || |||||||  |||||  | || ||||||||    
T  41178244 gtgacttcaaggttgatgaacagggtgtgttgagaatcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttgatcctagaggaaagtca 41178145  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  41178144 taagagtagcttaagcattcatccg 41178120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 15248820 - 15248735
Alignment:
Q  101 gaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| |||| | ||||||||||| |  |||||||||||||| ||||||    
T  15248820 gaggcagaatttgtattcctgacgacgatgagatgaagaagat-gattcttgaagaaagtcatagaagtagcttgagtattcatccg 15248735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 16835907 - 16836040
Alignment:
Q  52 actgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga-ttgattttg 150  Q
    ||||||| | |||| ||||| |||||||| || || || || || |||||||| |||||||| ||||||||||| || || || |||| | || |||||     
T  16835907 actgaagatagtgacttcaaagttgatgatcagggagtattaagattcagaggtagaatttgtattcctgacaatgaaga-atcaaaaaagttaatttta 16836005  T
Q  151 gaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    || |||||||||||||||||||||||||| |||||    
T  16836006 gaggaaagtcacaagagtagcttgagtattcatcc 16836040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 11960584 - 11960693
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||| | ||||    
T  11960584 aaggttgatgatcagggtgtgctgaggttcagaggaagattttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcacgatagta 11960683  T
Q  170 gcttgagtat 179  Q
    | ||||||||    
T  11960684 gtttgagtat 11960693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 16337927 - 16338036
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | || || ||||| |||||||    
T  16337927 aaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcataagagta 16338026  T
Q  170 gcttgagtat 179  Q
    | ||||||||    
T  16338027 ggttgagtat 16338036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 186
Target Start/End: Complemental strand, 44777976 - 44777845
Alignment:
Q  55 gaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaag 154  Q
    |||| |||||| |||||||||||||| || |||||| | || |||||||| |||||||| |||||||| || || || |||||||  || ||  | || |    
T  44777976 gaagatggtgacttcaaggttgatgatcagggtgtgctaagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagagg 44777877  T
Q  155 aaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| ||||||||||| || || ||||||    
T  44777876 aaagtcataagagtagcttaagcattcatccg 44777845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 12360021 - 12360073
Alignment:
Q  134 tgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||  |||||||| || |||||||||||||||||||||||||| ||||||    
T  12360021 tgaaaaagttgattttagaggaaagtcacaagagtagcttgagtattcatccg 12360073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 15209623 - 15209479
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||  | ||||| || || |||||| | ||  |||||||||||||  ||| |||| ||||||||||||| | |    
T  15209623 tagtaatcagactgaagatagtgattttaaaatcgatgatcatggagtgttgcgttttcgaggcagaatttgttttcttgacgacgatgagatgaagaaa 15209524  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  15209523 atgattcttgaagagagtcatagaagtagcttgagtattcatccg 15209479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 16692856 - 16692752
Alignment:
Q  82 cacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcc 181  Q
    |||||||||||||| ||| ||||  | ||||||||||||||| | |  |||||||||| | ||||| | ||||| ||||| |  |||||||||||||| |    
T  16692856 cacggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaaaaaaatgattcttgaagagagtcatagaagtagcttgagtattc 16692757  T
Q  182 atccg 186  Q
    |||||    
T  16692756 atccg 16692752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 16826774 - 16826818
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||    
T  16826774 tatttctagtagtggtattgcagttgatccatccaaagttgatgt 16826818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 17491398 - 17491354
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||||||||||| ||||||||||||||    
T  17491398 tatttctggtagtggtattgcagtagatccgtctaaagttgatgt 17491354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 12499005 - 12498843
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| |||||| || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  12499005 tcaagtttgtagacttgttggttgctagtaattagactgaagttggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 12498906  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| | || |||||||| | | ||||| | || || ||||| |  ||||||||||||||    
T  12498905 tcctgacgatgaagagatgaagaaaatgattcttgaggagagtcatagaagtagcttgagtat 12498843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 16372144 - 16372007
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| |||||  || ||||| ||||| || ||||||||||| ||| ||| | ||||||| ||||||||  |  | |||||||| | |    
T  16372144 tagtaatcagactgaagatggtggctttaaggtcgatgaccatggtgtgttgagattccgagcccgaatttgtattcctgatgataaagagatgaagaaa 16372045  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | ||||| ||||| |  ||||||||||||||    
T  16372044 atgattcttgaagagagtcatagaagtagcttgagtat 16372007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 13942746 - 13942622
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||| |||||||||| || |||||| | || |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  13942746 gtgacttccaggttgatgatcagggtgtgctaagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 13942647  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  13942646 taagagtagcttaagcattcatccg 13942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 106; Significance: 4e-53; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 49651 - 49820
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||  ||  ||||||| || |||| | | |||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||    
T  49651 tcaagtttgtggatttaatagttaatagtaatgaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagatgcagaatttgcat 49750  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  49751 tcctgataacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 49820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 9584 - 9474
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || |||||| |||| ||| |||| |||||||| ||||| ||||| || ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  9584 gatgatcaaggtgtggtgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 9486  T
Q  175 agtatccatccg 186  Q
    ||||||||||||    
T  9485 agtatccatccg 9474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 16046 - 15936
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || |||||| |||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  16046 gatgatcaaggtgtggtgagattccgaggaagaatttgtattccagacaataaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 15948  T
Q  175 agtatccatccg 186  Q
    ||||||||||||    
T  15947 agtatccatccg 15936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 753 - 922
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||  ||  || ||| ||||||||| |||||||   ||||||| ||  | ||||| || ||||| ||||||||  |||| |||||||| ||    
T  753 tcaagtttgtggccttgttggttgctagtaatcagactgaagacagtgattttaaaatcgatgatcatggtgtattgaggtttcgaggtagaatttgtat 852  T
Q  117 tcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||  ||| | || ||||| || ||||| |||| ||||||| |||||||| |||||||||||||| ||||||    
T  853 tctagacgatgaagagataaagaagat-gattctggaagagagtcacaaaagtagcttgagtattcatccg 922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 10434 - 10393
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||||||| ||||||||| || |||||||||||||||||    
T  10434 tatttctagtgatggtattgctgtggatccatctaaagttga 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 16896 - 16855
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||||||| ||||||||| || |||||||||||||||||    
T  16896 tatttctagtgatggtattgctgtggatccatctaaagttga 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 20018 - 19856
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||  | |||||||| |||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  20018 tcaagtttgtggatttaatggttaatggtaatcaagctgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggcagaatttgcat 19919  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||||| |||||||||||||  || ||||| || ||||||||||||||||||||||||||    
T  19918 tcctgacaatgatgagatgaaaaagttaattttagaggaaagtcacaagagtagcttgagtat 19856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 24180 - 24018
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||  | |||||||| |||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  24180 tcaagtttgtggatttaatgttttattgtaatcaatctgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggcagaatttgcat 24081  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||||| |||||||||||||  || ||||| || ||||||||||||||||||||||||||    
T  24080 tcctgacaatgatgagatgaaaaagttaattttagaggaaagtcacaagagtagcttgagtat 24018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 6822 - 6974
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||| |||||||||||| | ||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  6822 tcaagcttgtggatttaagggttaatagtaatcaaactgaagatagtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgtgt 6921  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||| ||||||||||||||  ||||||| |||||||||||||||||||    
T  6922 tcctgacaatgatgagatgaaaaggctgattttagaagaaagtcacaagagta 6974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 19852615 - 19852447
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||| || |||||||||||||||||||| |||||||||||    
T  19852615 tcaagtttgtggatttaatgattgctagtattcaaactgaagatggtgatttcaaggatgatgatcagggtgtgttgaggttcagaggaagaatttgcat 19852516  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||    
T  19852515 tcctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatcc 19852447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 19858651 - 19858483
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||| || |||||||||||||||||||| |||||||||||    
T  19858651 tcaagtttgtggatttaatgattgctagtattcaaactgaagatggtgatttcaaggatgatgatcagggtgtgttgaggttcagaggaagaatttgcat 19858552  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||    
T  19858551 tcctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatcc 19858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 21841621 - 21841453
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| ||||||| |||||||||  |||||||||||||||||||| || |||||||||||||||||||| || ||||||||    
T  21841621 tcaagtttgtggatttaatggttgctagtaattaaactgaagagggtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgcat 21841522  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| || |||||  ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||    
T  21841521 tcctgataatgatgatttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatcc 21841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 1267397 - 1267274
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||| ||||||  |||||||| |||||||||||    
T  1267397 gtgatttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtca 1267298  T
Q  162 caagagtagcttgagtatccatcc 185  Q
    |||||||||||||||||| |||||    
T  1267297 caagagtagcttgagtattcatcc 1267274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 20009497 - 20009665
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||| |||||||||||||| ||  |||||||| ||||||||  ||||| |||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  20009497 tcaagcttgtggatttaatggttactagtaatcgaactgaagagggtgacttcaaggttgatgatcaaggtgtgttgaggttcagaggaagaatttgtat 20009596  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    || ||| || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||    
T  20009597 tcttgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatcc 20009665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 31416053 - 31416220
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||||||  | ||||| | ||||| | | |||| |||||||||||||| || || || ||||| |||||||| |||||||| ||||    
T  31416053 aagtttgttgatttaatgattactggtaatgacactgaggatagtgacttcaaggttgatgatcagggcgtattgagattcagaggaagaatttgtattc 31416152  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| |||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||    
T  31416153 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccg 31416220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 23656131 - 23655962
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| ||||||| | | |||| || ||||||||||| || |||||||||||||||||||| |||||||||||    
T  23656131 tcaagtttgttgatttgatggttgctggtaatgaaactgaggatagtgactttaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 23656032  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||  ||||||  |||||| |||||||| |||||||||||||||| ||||| ||||||    
T  23656031 tcctgataatgatgatttgaaaaagttgattctggaagaaggtcacaagagtagcttaagtattcatccg 23655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 20985124 - 20985270
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||  ||  ||||||| ||||||||| |||||| |||||||||||||| || |||||||||||||| ||||| |||||||| ||    
T  20985124 tcaagtttgttgatttaatagttactagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggtttagaggaagaatttgtat 20985223  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcaca 163  Q
    |||| | || |||||| ||||||  ||||||||||||||||||||||    
T  20985224 tcctaaaaatgatgagttgaaaaagttgattttggaagaaagtcaca 20985270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 20389278 - 20389134
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||| ||||||||||| | |||| |||||||||||||| || ||||||||||| ||| ||||||||||||| |||||||| || |||||| ||||||      
T  20389278 tagtattcaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgaggcagaatttgtattcctgataatgatgagttgaaaaag 20389179  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||| |||||||||||||   ||||||| ||||| ||||||    
T  20389178 ttgattttagaagaaagtcacatacgtagcttaagtattcatccg 20389134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 20975230 - 20975390
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| | |||||   ||||| | | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  20975230 aagtttgttgatttaatggttgctggtaatggcactgaggatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattc 20975329  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||  | ||||   ||||||  |||||||| || ||||||||||||||||||||||||||    
T  20975330 ctgatgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagcttgagtat 20975390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 22372140 - 22371982
Alignment:
Q  21 gtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcct 120  Q
    |||||||||||||||| ||| |||||||||||| |||   |||||||||||||||||||| |   ||||||||||||||||||| ||||| | |||||||    
T  22372140 gtttgtggatttaatggttgctagtaatcaaaccgaaaagggtgatttcaaggttgatgatctgtgtgtgttgaggttcagaggaagaatattcattcct 22372041  T
Q  121 gacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    || |  |||||| ||||||  |||||| | |||||||||||||  |||||||| |||||    
T  22372040 gatagtgatgagttgaaaaagttgattatagaagaaagtcacagaagtagcttaagtat 22371982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 22052056 - 22051898
Alignment:
Q  28 gatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacg 127  Q
    ||||||||||||| |||||||   || || | | |||| |||||||||||||| || || || ||||| |||||||| |||||||| ||||||||||| |    
T  22052056 gatttaatgattgctagtaatggcacggaggatagtgacttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatg 22051957  T
Q  128 atgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||  ||||||  || ||||| || ||||||||||||||||| |||||||| ||||||    
T  22051956 aagaattgaaaaagttaattttagaggaaagtcacaagagtaggttgagtattcatccg 22051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 803295 - 803412
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  803295 gtgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattctagaggagagtca 803394  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  803395 caagagtaggttgagtat 803412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 6604817 - 6604700
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || |||||| |||||||||| || ||| | || ||||||||||| |||||  |||| |  |||||| | || || |||||    
T  6604817 gtgatttcaaggttgatgatcagggtgtgctgaggttcaggggtagagtctgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtca 6604718  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  6604717 caagagtaggttgagtat 6604700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 6680270 - 6680153
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || |||||| |||||||||| || ||| | || ||||||||||| |||||  |||| |  |||||| | || || |||||    
T  6680270 gtgatttcaaggttgatgatcagggtgtgctgaggttcaggggtagagtctgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtca 6680171  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  6680170 caagagtaggttgagtat 6680153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 12305917 - 12305800
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || ||||| |||||||||||| | ||| | |||||||||||||| |||||| |||| |  || ||| | ||||| |||||    
T  12305917 gtgattttaaggttgatgatcagggtgttttgaggttcagatgaagagtatgcattcctgacaatgatgagttgaagaagttaattcttgaagagagtca 12305818  T
Q  162 caagagtagcttgagtat 179  Q
     |||||||| ||||||||    
T  12305817 taagagtaggttgagtat 12305800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 31570464 - 31570588
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| || || || |||||||  || ||  | || ||||||||    
T  31570464 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtca 31570563  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||||||||| || || ||||||    
T  31570564 taagagtagcttaagcattcatccg 31570588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 22247996 - 22248163
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| | ||||||| ||  | ||||| || || |||||||| |||  |||||||||||| ||||    
T  22247996 aagtttgtggacttgttgattgctagtaatcagactgaagatagtgattttaaaatcgatgatcagggagtgttgagattccaaggcagaatttgtattc 22248095  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||  || |||||||| | | ||||| | ||||| ||||| |  ||||||||| |||| ||||||    
T  22248096 ctgacattgacgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgtgtattcatccg 22248163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 22988398 - 22988231
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  |||||  ||||||||| ||||||| | ||||||| ||  | ||||| || || |||||||| ||| ||||||||||||  ||||    
T  22988398 aagtttgtggaattgttgatttctagtaatcagactgaagatagtgattttaaaatcgatgatcaaggcgtgttgagattccgaggcagaatttctattc 22988299  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || || | ||||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  22988298 cttacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 22988231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 16407622 - 16407784
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  16407622 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 16407721  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| | || |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  16407722 tcctgacgatgaagagatgaataaaatgattcttgaagagagtcatagaagtagcttgagtat 16407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 29303056 - 29303162
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||| ||||||||||| | ||| |||| ||||||||||| |||||  |||| | ||||||| | | ||| |||||||||||||    
T  29303056 aaggttgatgatcagggtgtgctgaggttcagatgaagagtttgtattcctgacaatgatgatttgaagaaattgattcttgtagagagtcacaagagta 29303155  T
Q  170 gcttgag 176  Q
    | |||||    
T  29303156 ggttgag 29303162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 14566301 - 14566184
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| || |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  14566301 gtgattttaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 14566202  T
Q  162 caagagtagcttgagtat 179  Q
    ||| ||||| ||||||||    
T  14566201 caaaagtaggttgagtat 14566184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 16270846 - 16270963
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||  ||||||||||||| ||| | || ||||||||||| |||||  |||| |  |||||| | || || |||||    
T  16270846 gtgattttaaggttgatgatcagggtgtactgaggttcagaggaagagtatgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtca 16270945  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  16270946 caagagtaggttgagtat 16270963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 19979171 - 19979002
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| |||||||||  |||||| |||||| || ||||| ||||| || ||||| ||||| ||| ||||  ||||||| ||    
T  19979171 tcaagtttgtagacttgttggttgctagtaatcaggctgaagatggtgactttaaggtcgatgaccatggtgtattgagattccgaggtcgaatttgtat 19979072  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |||||| || |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  19979071 tcttgacaatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 19979002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 27355698 - 27355590
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||  |||| |||||||| ||| |||| |||||||||| ||||||| || || | |||||| | ||||| |||||||||||||    
T  27355698 aaggttgatgatcagggtgtactgagattcagagggagagtttgtattcctgacagcgatgagttg-aagggttgattcttgaagatagtcacaagagta 27355600  T
Q  170 gcttgagtat 179  Q
    | ||||||||    
T  27355599 gattgagtat 27355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 22376239 - 22376282
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  22376239 tatttctggtagtggtattgcagtagatccatctaaagttgatg 22376282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 22382414 - 22382457
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  22382414 tatttctggtagtggtattgcagtagatccatctaaagttgatg 22382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 30312721 - 30312890
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| |||||  |  ||| ||||||||| |||||||  ||||| || || || || || |||||||||||||| ||| ||||  | ||||||||    
T  30312721 tcaagtttgtagatttgttagttgctagtaatcagactgaagacggtgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttgcat 30312820  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| | |  |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  30312821 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 30312890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 22377056 - 22377200
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||  | ||||| |  || |||||||| ||| ||||||||||||| |||||| || | ||||||||||| | |    
T  22377056 tagtaatcagactgaagatagtgattttaaaatcgatgatctgggagtgttgagattctgaggcagaatttgtattcctaacgatgatgagatgaagaaa 22377155  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  | |||||||||||| ||||||    
T  22377156 atgattcttgaagagagtcatagaaatagcttgagtattcatccg 22377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 22383231 - 22383375
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||  | ||||| |  || |||||||| ||| ||||||||||||| |||||| || | ||||||||||| | |    
T  22383231 tagtaatcagactgaagatagtgattttaaaatcgatgatcggggagtgttgagattctgaggcagaatttgtattcctaacgatgatgagatgaagaaa 22383330  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  | |||||||||||| ||||||    
T  22383331 atgattcttgaagagagtcatagaaatagcttgagtattcatccg 22383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 22422678 - 22422721
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||    
T  22422678 tatttctggtgatggtattgcagtagatccctctaaagttgatg 22422721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 23950052 - 23949954
Alignment:
Q  88 gtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| | ||| ||||||||| ||| ||||||||||| ||||||||||| ||||  |||| | ||||| |||||||  |||||||||||||| ||||||    
T  23950052 gtgttgcgattccgaggcagaaattgtattcctgacaatgatgagatgaagaaga-cgattcttgaagagagtcacataagtagcttgagtattcatccg 23949954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 20395793 - 20395878
Alignment:
Q  101 gaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||||||  ||||| ||||| |||||||| || ||||| |||| | |||||||||||||  |||||||||||||| ||||||    
T  20395793 gaggcagaatttatattcccgacaatgatgagataaagaagat-gattcttgaagaaagtcacagaagtagcttgagtattcatccg 20395878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 21166115 - 21166277
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  21166115 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggagactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 21166214  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |||  || | || |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  21166215 tcccaacgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtat 21166277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 19864880 - 19864921
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  19864880 tatttctggtagtggtattgcagtagatccgtctaaagttga 19864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 21920534 - 21920575
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  21920534 tatttctggtagtggtattgcagtagatccgtctaaagttga 21920575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 32601348 - 32601179
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||| ||| |||||  || ||| ||||||||| |||||||  ||||| || || || ||||| |||||||||||||| ||| ||||  | ||||| ||    
T  32601348 tcaagtatgtagatttgttggttgctagtaatcagactgaagacggtgactttaaagtcgatgatcacggtgtgttgagattccgaggtcggatttgtat 32601249  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| ||| | |  ||||||||   | ||||| | ||||| ||||| |  |||||||||||||||||||||    
T  32601248 tcccgacgatgcagagatgaaggaaatgattcttgaagagagtcatagaagtagcttgagtatccatccg 32601179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 23886144 - 23886108
Alignment:
Q  101 gaggcagaatttgcattcctgacaacgatgagatgaa 137  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  23886144 gaggcagaatttgtattcctgacaatgatgagatgaa 23886108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 48273 - 48104
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||| |||||||| ||    
T  48273 tcaagtttgttgatttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatgatgaaggtgtgttgaggttcagaggaagaatttgtat 48174  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||| ||||||  |||||| |||||||||||||||| |||||||| ||||| ||||||    
T  48173 tcctgataatgatgagttgaaaaagttgattctggaagaaagtcacaaaagtagcttaagtattcatccg 48104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 27693 - 27524
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||  || ||| ||||| |||||||| || |||||||||||||||||||| |||||||||||    
T  27693 tcaagtttgtggatttaatggttgctagtaatcaaactgaaaatgatgacttcaatgttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 27594  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||| ||||||  ||||||||||||||||||||||  |||||||| ||||| ||||||    
T  27593 tcctgataatgatgagttgaaaaagttgattttggaagaaagtcacagaagtagcttaagtattcatccg 27524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 48171 - 48338
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  48171 tcaagtttgttgatttaatggttgctagtaatcaaactgaagatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 48270  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    |||||| || |||||| ||||||  ||||||||||||||||| || | ||||||||| ||||| ||||    
T  48271 tcctgataatgatgagttgaaaaagttgattttggaagaaagccataggagtagcttaagtattcatc 48338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 56986 - 57153
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||||| |||||   | ||||| | |||| |||||||||||||| || || || ||||||||||| || |||||||||||||    
T  56986 aagtttgttgatttgatggttgttggtaatggcattgaagatagtgacttcaaggttgatgatcagggagtattgaggttcaggggaagaatttgcattc 57085  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||  | ||     ||||||  || ||||| || |||||||||||||||||||||||||| ||||||    
T  57086 ctgatgatgacagtttgaaaaagttaattttagaggaaagtcacaagagtagcttgagtattcatccg 57153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2112 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 147 - 1
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| |||||||||||||||||  |||||||||||||||||||| || || ||||||||||||||||| |||||||||||    
T  147 tcaagtttgttgatttaatggttgctagtaatcaaactgaagagggtgatttcaaggttgatgatcagggggtgttgaggttcagaggaagaatttgcat 48  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcaca 163  Q
    |||||| ||||||||| ||||||  |||||||| |||||||||||||    
T  47 tcctgataacgatgagttgaaaaagttgattttagaagaaagtcaca 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 89582 - 89751
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  89582 tcaagtttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 89681  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||| |||||  ||||||  |||||||| ||||||||||||||||||||||  ||||| ||||||    
T  89682 tcctgacaatgatgatttgaaaaagttgattttagaagaaagtcacaagagtagctaaagtattcatccg 89751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 90260 - 90429
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  90260 tcaagtttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 90359  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||| |||||  ||||||  |||||||| ||||||||||||||||||||||  ||||| ||||||    
T  90360 tcctgacaatgatgatttgaaaaagttgattttagaagaaagtcacaagagtagctaaagtattcatccg 90429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 494977 - 494934
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||| ||||||||||||||||||||||    
T  494977 tatttctggtagtggtattgcggtagatccatctaaagttgatg 494934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 18518 - 18349
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  18518 tcaagtttgttgatttaatggttgctagtaatcaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 18419  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || ||| |  |||||| ||||||  |||||| ||||||||||| |||| |||||||| ||||| ||||||    
T  18418 tcatgatagtgatgagttgaaaaagttgattctggaagaaagtaacaaaagtagcttaagtattcatccg 18349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 15002498 - 15002667
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||||||| ||| ||||||| ||||||||| |  ||| |||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  15002498 tcaagtttgtggatttaatggttgctagtaatgaaactgaagataatgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 15002597  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||  |||||| ||||||| | |||||||||||||| |||||||| ||||| ||||||    
T  15002598 tcctgataatgatgatttgaaaaaattgattctagaagaaagtcacaaaagtagcttaagtattcatccg 15002667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 1648416 - 1648580
Alignment:
Q  22 tttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 121  Q
    ||||| ||||||||||||| | ||||| |||||||   |||||||||||||||||||||||| ||||||||||| |||||| |||||||||| |||||||    
T  1648416 tttgttgatttaatgattgctggtaatgaaactgagaatggtgatttcaaggttgatgaacaaggtgtgttgagattcagaagcagaatttgtattcctg 1648515  T
Q  122 acaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | || |||||| ||||||| || ||| | || |||||||||||||||||||| ||||| ||||||    
T  1648516 ataatgatgagttgaaaaggttaattctagaggaaagtcacaagagtagcttaagtattcatccg 1648580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 8707054 - 8706887
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||||||||||| |||||| |||||||||||||| || ||||||||||| ||| ||||||||||||| ||||    
T  8707054 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatcaaggtgtgttgagattccgaggcagaatttgtattc 8706955  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||| ||||||  |||||||| |||||||||||||| |||| ||| ||||| ||||||    
T  8706954 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacaaaagtaacttaagtattcatccg 8706887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 27901522 - 27901355
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||||||| ||  |||||||||| |||| | | | |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  27901522 aagtttgtggatttaatggttactagtaatcaagctgaggatagagatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtattc 27901423  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| || ||  |||| |  |||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  27901422 ctgacaatgaagaattgaagaagttgattttagaagaaagtcataagagtaacttgagtattcatccg 27901355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 15414162 - 15414328
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || |||||||||||||||||||||   |||||||||||||| |||| || ||||||||||| ||| |||| |||||||| ||||    
T  15414162 aagtttgtggatttgttggttgttagtaatcaaactgaagaaagtgatttcaaggttcatgatcagggtgtgttgagattctgaggaagaatttgtattc 15414261  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    || | || |||||| ||||||  ||||||||||||||||||||||  ||||| || ||||| |||||    
T  15414262 ctcataatgatgagttgaaaaagttgattttggaagaaagtcacagaagtagtttaagtattcatcc 15414328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 15247062 - 15246893
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| | ||||||| | |||| |||||||||||||| || ||||||||||||||||| || |||||||| ||    
T  15247062 tcaagtttgttgatttgatggttgctggtaatgacactgaagatagtgacttcaaggttgatgatcaaggtgtgttgaggttcaggggaagaatttgtat 15246963  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || || ||| ||||||  |||||| |||| |||||||||||||||||||| ||||| ||||||    
T  15246962 tcctgataatgacgagttgaaaaagttgattctggaggaaagtcacaagagtagcttaagtattcatccg 15246893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 15078773 - 15078605
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||||||||||  || |||||||||||||||||  |  ||||||||||| ||||| || |||||||| ||||||||||| |||||||||||    
T  15078773 tcaagtttgtggatttaatggatgctagtaatcaaactgaagaggaagatttcaaggtcgatgagcagggtgtgttaaggttcagaggaagaatttgcat 15078674  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    || ||| |  |||||| ||||||  |||||| ||||||||||||| |  |||||||| ||||| |||||    
T  15078673 tcttgatagtgatgagttgaaaaagttgattctggaagaaagtcatagaagtagcttaagtattcatcc 15078605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 15320261 - 15320120
Alignment:
Q  44 gtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagatt 143  Q
    ||||| ||||||||| ||||||  ||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| || |||||| ||||||  ||    
T  15320261 gtaattaaactgaagatggtgacctcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttacattcctgataatgatgagttgaaaaagtt 15320162  T
Q  144 gattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||||||  ||||||||||||  |||||||| ||||| |||||    
T  15320161 gattttaaaagaaagtcacagaagtagcttaagtattcatcc 15320120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 15358307 - 15358423
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||  ||||||  |||||||| ||  |||||||||||||||    
T  15358307 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaagttgattttagagtaaagtcacaagagta 15358406  T
Q  170 gcttgagtatccatccg 186  Q
    |||| ||||| ||||||    
T  15358407 gcttaagtattcatccg 15358423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 16148790 - 16148680
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 175  Q
    ||||| || |||||||||||||||| ||| |||||||| ||||||||||| || | | ||||||  |||| | |||| |||||||||||||| ||||| |    
T  16148790 gatgatcagggtgtgttgaggttcataggaagaatttgtattcctgacaatgaagggttgaaaaagttgactctggaggaaagtcacaagagcagcttaa 16148691  T
Q  176 gtatccatccg 186  Q
    |||||||||||    
T  16148690 gtatccatccg 16148680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 16152936 - 16152826
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 175  Q
    ||||| || |||||||||||||||| ||| |||||||| ||||||||||| || | | ||||||  |||| | |||| |||||||||||||| ||||| |    
T  16152936 gatgatcagggtgtgttgaggttcataggaagaatttgtattcctgacaatgaagggttgaaaaagttgactctggaggaaagtcacaagagcagcttaa 16152837  T
Q  176 gtatccatccg 186  Q
    |||||||||||    
T  16152836 gtatccatccg 16152826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 3263973 - 3264090
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  3263973 gtgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 3264072  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  3264073 caagagtaggttgagtat 3264090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 29452717 - 29452833
Alignment:
Q  63 tgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcac 162  Q
    ||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | || || ||||||    
T  29452717 tgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcac 29452816  T
Q  163 aagagtagcttgagtat 179  Q
    |||||||| ||||||||    
T  29452817 aagagtaggttgagtat 29452833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 44661045 - 44661162
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||| || || ||| |||| |  |||||| | || || |||||    
T  44661045 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtca 44661144  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  44661145 caagagtaggttgagtat 44661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 14695226 - 14695090
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||| ||||||||| | ||||||| ||  | ||||| || || |||||||| ||| ||||||||||||| ||||||||| | ||||||||||| | |    
T  14695226 tagtaattaaactgaagatagtgattttaaaatcgatgatcagggagtgttgagattccgaggcagaatttgtattcctgacgatgatgagatgaagaaa 14695127  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagta 178  Q
     ||||| | ||||| ||||| |  |||||||||||||    
T  14695126 atgattcttgaagagagtcatataagtagcttgagta 14695090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 33224011 - 33223899
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    |||||||||||||| || |||||  || |||||||||| |||||||| ||||||||||| |||||  |||| |  |||||| | ||||| ||||| ||||    
T  33224011 ttcaaggttgatgatcagggtgttctgtggttcagaggaagaatttgtattcctgacaatgatgatttgaagaagttgattctagaagagagtcataaga 33223912  T
Q  167 gtagcttgagtat 179  Q
    |||| ||||||||    
T  33223911 gtaggttgagtat 33223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 14696042 - 14695999
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  14696042 tatttctagtagtggtattgcagtagatccatctaaagttgatg 14695999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 11206410 - 11206527
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||  |||| ||||||||||| |||||  |||| |  |||||| | || || |||||    
T  11206410 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggaagggtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtca 11206509  T
Q  162 caagagtagcttgagtat 179  Q
    ||| ||||| ||||||||    
T  11206510 caatagtaggttgagtat 11206527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 20892075 - 20891958
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || ||| |  ||||||||||||  ||| |||| ||| |||||||||||||  |||| |  |||||| | ||||| |||||    
T  20892075 gtgattttaaggttgatgatcagggtttcctgaggttcagagaaagagtttgtatttctgacaacgatgatttgaagaagttgattcttgaagagagtca 20891976  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  20891975 caagagtaggttgagtat 20891958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 14850293 - 14850409
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||| ||||| || || |||||||| ||| ||||||||||||| ||||||||| | ||||||||||| | | ||||| | ||||| | ||| |  ||||    
T  14850293 aaggtcgatgatcaaggcgtgttgagattccgaggcagaatttgtattcctgacgatgatgagatgaagaaaatgattcttgaagagattcatagaagta 14850392  T
Q  170 gcttgagtatccatccg 186  Q
    |||||||||| ||||||    
T  14850393 gcttgagtattcatccg 14850409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 14849449 - 14849492
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  14849449 tatttctggtagtggtattgcagtagatccatctaaagttgatg 14849492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 15146759 - 15146928
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||| || | | ||||||||| |||||||  ||||| || ||||| ||| |||| ||||||||||| ||| ||||  |||| || ||    
T  15146759 tcaagtttgtagacttattggtagctagtaatcagactgaagaaggtgaatttaaggtcgataaacatggtgtgttgagattccgaggtcgaatatgtat 15146858  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||  | || |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  15146859 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 15146928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 18614698 - 18614804
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| |||||| || ||| ||||||||| |||||||   ||||||| || || || || |||||||||||||| ||| ||||  | ||||||||    
T  18614698 tcaagtttgtagatttattggttgctagtaatcagactgaagactgtgattttaaagtcgacgatcacggtgtgttgagattctgaggtcggatttgcat 18614797  T
Q  117 tcctgac 123  Q
    || ||||    
T  18614798 tcttgac 18614804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 18226320 - 18226489
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| |||||||  ||||| || || || || || |||||||||||||| ||| ||||  | ||||||||    
T  18226320 tcaagtttgtagacttgttggttgctagtaatcagactgaagacggtgactttaaagtcgacgagcacggtgtgttgagattccgaggtcggatttgcat 18226419  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| | |  || ||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  18226420 tcctgacgatgcagatatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 18226489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 16149640 - 16149596
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||    
T  16149640 tatttctggtagtggtattgcagttgatccatcgaaagttgatgt 16149596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 16153786 - 16153742
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||    
T  16153786 tatttctggtagtggtattgcagttgatccatcgaaagttgatgt 16153742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 3344 - 3176
Alignment:
Q  18 caagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcatt 117  Q
    ||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||   | |||||||||||||||||||| |||||||| |||    
T  3344 caagtttgttgatttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatggtgagggtgtgttgaggttcagaggaagaatttgtatt 3245  T
Q  118 cctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||| || |||||| ||||||   ||||| |||||||| ||||||| |||||||| ||||| ||||||    
T  3244 cctgataatgatgagttgaaaaagatgattctggaagaatgtcacaaaagtagcttaagtattcatccg 3176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 1038 - 870
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  1038 tcaagtttgttgatttaatggttgctagtaatgaaactgaagatggtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 939  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| ||| ||||  ||||||  |||||||||| |||||| ||||  |||||||| ||||| |||||    
T  938 tcctgataacaatgatttgaaaaagttgattttggtagaaagccacagaagtagcttaagtattcatcc 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 24211 - 24378
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||||||||||| |||||| |||||||||||||| || ||||||||||| ||| ||||||||||||| ||||    
T  24211 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatcaaggtgtgttgagattccgaggcagaatttgtattc 24310  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||| ||||||  |||||||| |||||||||||||| |||||||| ||||| ||||||    
T  24311 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacaaaagtagcttaagtattcatccg 24378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 2502 - 2636
Alignment:
Q  52 actgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttgg 151  Q
    ||||||| | |||| |||||||||||||| || ||||||||||||||||||||||||||||| || |||||||| |||| | ||||||  ||||||||||    
T  2502 actgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggcagaatttgtatccctgacaatgatgggttgaaaaagttgattttgg 2601  T
Q  152 aagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||||||||||||| ||||||    
T  2602 aagaaagtcacaagagtagcttgagtattcatccg 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 203 - 368
Alignment:
Q  21 gtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcct 120  Q
    |||||||||||||||| ||| |||||||||||||||||  |||||||||||||||||||| || |||||||||||||||||||| |||| |||||||| |    
T  203 gtttgtggatttaatggttgctagtaatcaaactgaagagggtgatttcaaggttgatgatcaaggtgtgttgaggttcagaggaagaacttgcattctt 302  T
Q  121 gacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |  |||||| ||||||  |||||||| ||||||||||| |  |||||||| ||||| ||||||    
T  303 gatagtgatgagttgaaaaagttgattttagaagaaagtcatagaagtagcttaagtattcatccg 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 32580 - 32411
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  32580 tcaagtttgttgatttgatggttgctggtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 32481  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||  ||||||  |||||| |||| |||||||||||||||||||| ||||| ||||||    
T  32480 tcctgataatgatgatttgaaaaagttgattctggaggaaagtcacaagagtagcttaagtattcatccg 32411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 29226 - 29058
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||| |||||| |||||||||||||| || |||||||||||||||||||| ||||||| |||    
T  29226 tcaagtgtgtggatttaatggttactagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaattttcat 29127  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| |  |||||| ||||||  ||||||||||||||||| ||||  |||||||| ||||| |||||    
T  29126 tcctgatagtgatgagttgaaaaagttgattttggaagaaagccacagaagtagcttaagtattcatcc 29058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 30905 - 30863
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgat 239  Q
    ||||||| || ||||||||||||||||||| ||||||||||||    
T  30905 tatttctggtagtggtattgcagtagatccgtctaaagttgat 30863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 50770 - 50726
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || | ||||||||||| ||||||||||||||||||||    
T  50770 tatttctggtagaggtattgcagttgatccatctaaagttgatgt 50726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 1110 - 1276
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| |||||||  | |||||| | ||||||||||||||||||| || || ||||||||||||||||| |||||||||||    
T  1110 tcaagtttgttgatttaatggttgctagtaatgga-ctgaagatagtgatttcaaggttgatgatcaaggagtgttgaggttcagaggaagaatttgcat 1208  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||||||||| |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||    
T  1209 tcctgacaatgatgagttgaaaatgttgattttagaagaaagtcacagaagtagcttaagtattcatc 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 34278 - 34188
Alignment:
Q  96 gttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  34278 gttcagaggcagaatttgcattcctgacaacgatgagataaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccg 34188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 5599 - 5431
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||| |||||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  5599 tcaagtgtgtggatttaatggttactagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 5500  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| |  |||||| ||||||  | ||||||||||||||  ||||  |||||||| ||||| |||||    
T  5499 tcctgatagtgatgagttgaaaaagtcgattttggaagaaatacacagaagtagcttaagtattcatcc 5431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 13083 - 13207
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| |||||| ||||||  |||||||| |||||||||||    
T  13083 gtgacttcaaggttgatgatcagggtgtattgagattcagaggaagaatttgcattcctgacaatgatgagttgaaaaagttgattttagaagaaagtca 13182  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  13183 caagagtagcttgagtattcatccg 13207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 68537 - 68370
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||||||| ||  |||||||||| |||| | | | |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  68537 aagtttgtggatttaatggttactagtaatcaagctgaggatagagatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtattc 68438  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| || ||  |||| |  |||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  68437 ctgacaatgaagaattgaagaagttgattttagaagaaagtcataagagtaacttgagtattcatccg 68370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 4092 - 4252
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| | |||||   ||||| | | |||| || ||||| ||||| || |||||||||||||||||||| |||||||| ||||    
T  4092 aagtttgttgatttaatggttgctggtaatggcactgaggatagtgagtttaaggtggatgatcagggtgtgttgaggttcagaggaagaatttgtattc 4191  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |||| || |||||  | ||||| || ||||| || |||||||||||||||||||| |||||    
T  4192 ctgataatgatgatttcaaaaggttaattttagaggaaagtcacaagagtagcttaagtat 4252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 4945 - 4776
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||||||| ||| |||||||||||| ||||  ||||| |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  4945 tcaagtttgttgatttaatggttgctagtaatcaaaccgaagagggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 4846  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| | || |||||  ||| ||  |||||||| |||||||| ||||  |||||||| ||||| ||||||    
T  4845 tcctaataatgatgatttgataaagttgattttagaagaaagccacagaagtagcttaagtattcatccg 4776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 5919 - 5750
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| ||| ||||| | |||| |||||||||||||| || ||| |||||||||||||||| |||||||| ||    
T  5919 tcaagtttgttgatttgatggttgctggtaatgaaattgaagatagtgacttcaaggttgatgatcagggtatgttgaggttcagaggaagaatttgtat 5820  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||  ||||||  |||||| ||||||||||||||||||||||||| ||||| ||||||    
T  5819 tcctgataatgatgatttgaaaaagttgattctggaagaaagtcacaagagtagcttaagtattcatccg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 3960 - 3791
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| |||||||||   |||| |||||||||||||  || |||||||||||||||||||| |||||||||||    
T  3960 tcaagtttgttgatttgatggttgctggtaatgaaactgaagagagtgacttcaaggttgatgttcagggtgtgttgaggttcagagggagaatttgcat 3861  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| || || |||||| ||||||  || ||| ||||||||||||||||||||||||| ||||| ||||||    
T  3860 tccagataatgatgagttgaaaaagtttattctggaagaaagtcacaagagtagcttaagtattcatccg 3791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 8332 - 8291
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  8332 tatttctagtagtggtattgcagtagatccatctaaagttga 8291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 2622 - 2791
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| ||||||||| | |||| ||||||||||||||  | ||||||||||||||| |||  |||||||||||    
T  2622 tcaagtttgttgatttgatggttgctggtaatgaaactgaagatagtgacttcaaggttgatgatgagggtgtgttgaggttcggagaaagaatttgcat 2721  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||| ||||||  |||||||| || |||||||||||||||||||| ||||| ||||||    
T  2722 tcctgataatgatgagttgaaaaatttgattttagaggaaagtcacaagagtagcttaagtattcatccg 2791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 1991 - 2159
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||||||| ||||||| ||||||||| | |||| ||||||||| |||| || ||||||||||||||| |||| |||||||| ||    
T  1991 tcaagtttgttgatttgatgattgctagtaatgaaactgaagatagtgacttcaaggttaatgatcagggtgtgttgaggttccgaggaagaatttgtat 2090  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||||| || |||||  ||||||  |||||||| ||  ||||||||||||||||||| ||||| |||||    
T  2091 tcctgataatgatgatttgaaaaagttgattttagagaaaagtcacaagagtagcttaagtattcatcc 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 2494 - 2660
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||||| ||||| |||| || | | |||| |||||||| ||||| || |||||||| ||||||||||| || ||||| ||||    
T  2494 aagtttgttgatttaatggttgttggtaatgaaacagaggatagtgacttcaaggtcgatgatcagggtgtgttaaggttcagaggaaggatttgtattc 2593  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||||||| || ||  ||||||  |||||||| ||||||||||||||||||||||||||||| |||||    
T  2594 ctgacaatgaagaattgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatcc 2660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 8184 - 8062
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||||||||||| ||||| ||||||| |||||||||  | ||||   ||||||  || ||||| || || |||||    
T  8184 gtgacttcaaggttgatgatcagggtgtgttgaggtttagaggaagaattttcattcctgatgatgatggtttgaaaaagttaattttagaggagagtca 8085  T
Q  162 caagagtagcttgagtatccatc 184  Q
    |||||||||||||||||| ||||    
T  8084 caagagtagcttgagtattcatc 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 286 - 448
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||| | |||| ||||||||||| ||  | |||||||||||||||||||| |||||||||||    
T  286 tcaagtgtgtggatttaatggttactagtaatgaaactgaagatcgtgacttcaaggttgacgattagggtgtgttgaggttcagaggaagaatttgcat 385  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |||||| |  |||||| ||||||  |||||||| |||||||||||||  |||||||| |||||    
T  386 tcctgatagtgatgagttgaaaaagttgattttcgaagaaagtcacagaagtagcttaagtat 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 28318 - 28219
Alignment:
Q  85 ggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||||||||||||||| |||| |||||||| ||| || | || |||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||    
T  28318 ggtgtgttgaggttcggaggaagaatttgtatttctaataatgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatc 28219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 34571 - 34472
Alignment:
Q  85 ggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||||||||||||||| |||| |||||||| ||| || | || |||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||    
T  34571 ggtgtgttgaggttcggaggaagaatttgtatttctaataatgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatc 34472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 1052 - 883
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||||||||| ||| ||  |||||||||| ||||   | |||||||||||||||||||||| ||||||||||| || |||||||||||||| ||    
T  1052 tcaagtttgtggattttatggttactagtaatcaagctgagaatagtgatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtat 953  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||| || ||  |||| |  |||||||| ||||||||||| ||||| | ||||||||| ||||||    
T  952 tcctgacaatgaagaattgaagaagttgattttagaagaaagtcataagagcaacttgagtattcatccg 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 69; Significance: 5e-31; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 51362 - 51486
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||| || ||  ||||||  |||||||| |||||||||||    
T  51362 gtgacttcaaggttgatgatcagggtgtgttgaggttcagagatagaatttgtattcctgacaatgacgaattgaaaaagttgattttagaagaaagtca 51461  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  51462 caagagtagcttgagtattcatccg 51486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 60396 - 60520
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||| || ||  ||||||  |||||||| |||||||||||    
T  60396 gtgacttcaaggttgatgatcagggtgtgttgaggttcagagatagaatttgtattcctgacaatgacgaattgaaaaagttgattttagaagaaagtca 60495  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  60496 caagagtagcttgagtattcatccg 60520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 66784 - 66908
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||| || ||  ||||||  |||||||| |||||||||||    
T  66784 gtgacttcaaggttgatgatcagggtgtgttgaggttcagagatagaatttgtattcctgacaatgacgaattgaaaaagttgattttagaagaaagtca 66883  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  66884 caagagtagcttgagtattcatccg 66908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 26494 - 26400
Alignment:
Q  92 tgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| ||||| |||||||| |||||||| ||||||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||||    
T  26494 tgaggtttagaggaagaatttgtattcctgataacgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatccg 26400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 24098811 - 24098971
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||||||  | ||||| | ||||| | | |||| ||||||||||| || || ||||| |||||||||||||| |||||||| ||||    
T  24098811 aagtttgttgatttgatgattactggtaatgacactgaggatagtgacttcaaggttgacgatcagggtgttttgaggttcagaggaagaatttgtattc 24098910  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| |||| | ||||||  |||||||| |||||||||||||||||||||||||||||    
T  24098911 ctgacaatgatgggttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtat 24098971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 23197454 - 23197608
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||| ||| ||| | ||| | ||||||||| | |||| || || |||||||| || |||||||||||||||||||| |||||||| ||||    
T  23197454 aagtttgtggatttgatggttgctggtagtgaaactgaagatagtgactttaaagttgatgatcagggtgtgttgaggttcagaggaagaatttgtattc 23197553  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 173  Q
    |||| || |||||  ||||||  |||||||| || |||||| |||||||||||||    
T  23197554 ctgataatgatgatttgaaaaagttgattttagaggaaagtgacaagagtagctt 23197608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 20856011 - 20856135
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||||||||||| || ||||||||||| || |||||||||||||| ||||||||||| || ||  |||| |  |||||||| |||||||||||    
T  20856011 gtgatttcaaggttgatgagcaaggtgtgttgagattaagaggcagaatttgtattcctgacaatgaggaattgaagaagttgattttagaagaaagtca 20856110  T
Q  162 caagagtagcttgagtatccatccg 186  Q
     ||||| | ||||||||| ||||||    
T  20856111 taagagcaacttgagtattcatccg 20856135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 20939314 - 20939438
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||| | |||||||||||||||||  | |||||  | ||||  || ||||| |||||||||||    
T  20939314 gtgacttcaaggttgatgatcaaggtgtgttgagattcagaagaagaatttgcattcctgatgatgatgatttaaaaaagttaattttagaagaaagtca 20939413  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  20939414 caagagtagcttgagtattcatccg 20939438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 19662396 - 19662505
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || ||||| |||||||||||||| |||||||| |||||||| || || ||| ||||||  |||||||| || ||||||||||||||||    
T  19662396 aaggttgatgatcagggtgtattgaggttcagaggaagaatttgtattcctgataatgacgagttgaaaaagttgattttagaggaaagtcacaagagta 19662495  T
Q  170 gcttgagtat 179  Q
    |||| |||||    
T  19662496 gcttaagtat 19662505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 20295520 - 20295403
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||    
T  20295520 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtca 20295421  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  20295420 caagagtaggttgagtat 20295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 184
Target Start/End: Complemental strand, 19855405 - 19855291
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || ||||| |||||||||||||| || ||||| |||||||| || || ||| ||||||  |||||||| || ||||||||||||| ||    
T  19855405 aaggttgatgatcagggtgtattgaggttcagaggaaggatttgtattcctgataatgacgagttgaaaaagttgattttagaggaaagtcacaagaata 19855306  T
Q  170 gcttgagtatccatc 184  Q
    |||| ||||| ||||    
T  19855305 gcttaagtattcatc 19855291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 20835108 - 20835208
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| | |||||   ||||| | | ||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||    
T  20835108 aagtttgttgatttaatggttgctggtaatggcactgaggatagtgattttaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattc 20835207  T
Q  119 c 119  Q
    |    
T  20835208 c 20835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 19760114 - 19760247
Alignment:
Q  52 actgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatga-aaagattgattttg 150  Q
    ||||||| | |||| || ||||| ||||| || || |||||| | ||| |||| |||||||| ||||||||| |||||||||||| ||||| ||||| |     
T  19760114 actgaagatagtgactttaaggtcgatgatcagggagtgttgcgattccgaggtagaatttgtattcctgacgacgatgagatgagaaaga-tgattctt 19760212  T
Q  151 gaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||||| |||||||  ||||||||||||||||||||    
T  19760213 gaagagagtcacataagtagcttgagtatccatcc 19760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 31539248 - 31539365
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||  ||||||| || |||||| ||||||||| ||| ||| |||| ||||||||||| || ||| |||| |  |||||| |||| || |||||    
T  31539248 gtgatttcaaaattgatgatcagggtgtgctgaggttcacaggtagagtttgtattcctgacaatgaagagttgaagaagttgattctggaggagagtca 31539347  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  31539348 caagagtaggttgagtat 31539365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 37678188 - 37678071
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||  ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  37678188 gtgatttcaaagttgatgatcagggtgtactgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 37678089  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  37678088 caagagtagtttgagtat 37678071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 50619509 - 50619619
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 175  Q
    ||||| || ||||||||||||||  |||| |||||||| |||||  |||| ||||||||||| | | ||||| | ||||| ||||| || ||||||||||    
T  50619509 gatgatcaaggtgtgttgaggtttcgaggtagaatttgtattccatacaatgatgagatgaagaaaatgattcttgaagagagtcataaaagtagcttga 50619608  T
Q  176 gtatccatccg 186  Q
    |||| ||||||    
T  50619609 gtattcatccg 50619619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 22110150 - 22110013
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||| | ||||| || || |||||||| ||| ||||||||||||| ||||| ||| | ||||||||||| | |    
T  22110150 tagtaatcagactgaagatagtgattttaagatcgatgaccaaggagtgttgagattccgaggcagaatttgtattccagacgatgatgagatgaagaaa 22110051  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | ||||| ||||| |  |||| |||||||||    
T  22110050 atgattcttgaagagagtcatagaagtaacttgagtat 22110013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 22113999 - 22113862
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||| | ||||| || || |||||||| ||| ||||||||||||| ||||| ||| | ||||||||||| | |    
T  22113999 tagtaatcagactgaagatagtgattttaagatcgatgaccaaggagtgttgagattccgaggcagaatttgtattccagacgatgatgagatgaagaaa 22113900  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | ||||| ||||| |  |||| |||||||||    
T  22113899 atgattcttgaagagagtcatagaagtaacttgagtat 22113862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 16373680 - 16373513
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||| |||||||   |||| || ||||| ||||| || ||||||||||| ||  |||| |||||||| ||||    
T  16373680 aagtttgtggacttgttggttgctagtaatcagactgaagacagtgactttaaggtcgatgatcaaggtgtgttgagatttcgaggtagaatttgtattc 16373581  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||| | ||||||||||| |||| ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  16373580 cagacgatgatgagatgaagaaga-tgattcttgaagagagtcatagaagtagcttgagtattcatccg 16373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 20140027 - 20139982
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgtc 242  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||    
T  20140027 tatttctcgtagtggtattgcagtagatccgtctaaagttgatgtc 20139982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 21025326 - 21025221
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || |||||  |||| || ||||||||||| ||| ||||| ||||||| ||    
T  21025326 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaggtcaatgaccatggtgtgttgagattccgaggccgaatttgtat 21025227  T
Q  117 tcctga 122  Q
    ||||||    
T  21025226 tcctga 21025221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 19107462 - 19107352
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| ||||| || ||||| || |||| ||||| | ||||| || |||| ||||||||||    
T  19107462 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaaga-tgattcttgaagagagccacaggagtagcttg 19107364  T
Q  175 agtatccatccg 186  Q
    ||||| ||||||    
T  19107363 agtattcatccg 19107352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 22116857 - 22116814
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||| ||||||||||||||||||    
T  22116857 tatttctggtagtggtattgcagtaaatccatctaaagttgatg 22116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 50618813 - 50618856
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || ||||||||||||||||||| |||||||||||||    
T  50618813 tatttctggtagtggtattgcagtagatccctctaaagttgatg 50618856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 21952017 - 21951900
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||| ||||| || |||||  |||| |||||||| ||| |||| |||||| |||| |||||  |||| |  |||||  | ||||| |||||    
T  21952017 gtgattttaaggtggatgatcagggtgtactgagattcagaggaagagtttgtattcctaacaatgatgatttgaagaagttgatccttgaagagagtca 21951918  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  21951917 caagagtaggttgagtat 21951900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 51331908 - 51331949
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    
T  51331908 tatttctagtgatggtattgcagtggatccgtctaaagttga 51331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 20835231 - 20835263
Alignment:
Q  154 gaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||||||||||| ||||||    
T  20835231 gaaagtcacaagagtagcttgagtattcatccg 20835263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 20938478 - 20938522
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||    
T  20938478 tatttctggtagtggtattgcagttgatccatcgaaagttgatgt 20938522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 11196 - 11363
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||| | ||||| ||||||||| | |||| || ||||||||||| || ||||||||||| |||| ||| |||||||||||||    
T  11196 aagtttgttgatttgatggttgctggtaatgaaactgaagatagtgactttaaggttgatgatcaaggtgtgttgagattcaaaggaagaatttgcattc 11295  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||  ||||||  ||||||||||| ||||| |||||||||||||| ||||| ||||||    
T  11296 ctgataatgatgatgtgaaaaagttgattttggaggaaagccacaagagtagcttaagtattcatccg 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 14966 - 15133
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||| | ||||| ||||||||| | |||| || ||||||||||| || ||||||||||| |||| ||| |||||||||||||    
T  14966 aagtttgttgatttgatggttgctggtaatgaaactgaagatagtgactttaaggttgatgatcaaggtgtgttgagattcaaaggaagaatttgcattc 15065  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||  ||||||  ||||||||||| ||||| |||||||||||||| ||||| ||||||    
T  15066 ctgataatgatgatgtgaaaaagttgattttggaggaaagccacaagagtagcttaagtattcatccg 15133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 21152 - 20983
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| | ||||| ||| ||||| | |||| ||||||||| |||| || ||| | |||| ||||| ||| || ||||| ||    
T  21152 tcaagtttgttgatttgatggttgctggtaatgaaattgaagatagtgacttcaaggttaatgatcagggtatattgaagttcacaggaaggatttgtat 21053  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||||    
T  21052 tcctgataatgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatccg 20983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 46538 - 46704
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| ||| ||||||| || |||| | | |||| || ||||||||||| || |||||||||||||||||||| ||||| || ||||    
T  46538 aagtttgttgatttgatggttgctagtaatgaagctgaggatagtgactttaaggttgatgatcagggtgtgttgaggttcagaggaagaatctgtattc 46637  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    |||| || |||||  ||||||  || ||||| ||||||||||||||||||||||||||||| |||||    
T  46638 ctgataatgatgatttgaaaaagttaattttagaagaaagtcacaagagtagcttgagtattcatcc 46704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 41515 - 41632
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||||||||| |||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| || ||| |||| |  |||||| | || || |||||    
T  41515 gtgatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtca 41614  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  41615 caagagtaggttgagtat 41632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 3874 - 3831
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  3874 tatttctggtagtggtattgcagtagatccatctaaagttgatg 3831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 3058 - 2921
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | ||||||| ||  | ||||| || || |||||||| ||| ||||||||||||| |||||| |  | ||||||||||| | |    
T  3058 tagtaatcagactgaagatagtgattttaaaatcgatgatcagggggtgttgagattctgaggcagaatttgtattcctaatgatgatgagatgaagaaa 2959  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | ||||| ||||| |  ||||||||||||||    
T  2958 atgattcttgaagagagtcatagaagtagcttgagtat 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 149739 - 149570
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||| || ||| ||| | ||||| ||||||| |   |||| || ||||||||||| || |||||||||||||||||||| | |||||||||    
T  149739 tcaagtttgtggacttgatggttgctggtaatgaaactgaggaaagtgactttaaggttgatgatcagggtgtgttgaggttcagaggaaaaatttgcat 149640  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||| || |||||  ||||||  |||||| |||| |||||||||||||||||||| ||||| ||||||    
T  149639 tcctgataatgatgatttgaaaaagttgattctggaggaaagtcacaagagtagcttaagtattcatccg 149570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 194843 - 195010
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||||| |||||   ||||| | | |||| |||||||||||||| || ||||||||||| |||||||| |||||||||||||    
T  194843 aagtttgttgatttaatggttgttggtaatggcactgaggatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattc 194942  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||  | |||||  ||||||  || ||||| || |||||||||||||||||||| ||||| ||||||    
T  194943 ctgatgatgatgatttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatccg 195010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 24879 - 24918
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagtt 236  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24879 tatttctagtagtggtattgcagtagatccatctaaagtt 24918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 25672 - 25832
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| | | ||||| ||  | |||||  | || |||||| | ||  |||| |||||||| ||||    
T  25672 aagtttgtggacttgttgattgctagtaatcagactgaagatagcgattttaaaatcgatgattagggagtgttgcgttttcgagggagaatttgtattc 25771  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| ||||||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  25772 ctgacaatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtat 25832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 117 - 1
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||  ||||||  |||||||| || ||||||||||||||||    
T  117 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaagttgattttagaggaaagtcacaagagta 18  T
Q  170 gcttgagtatccatccg 186  Q
    |||| ||||| ||||||    
T  17 gcttaagtattcatccg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 10960 - 10793
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| ||| ||| ||||||||  |||||| |||||||||||||| || |||||||||||||||||||| || ||||||||||    
T  10960 aagtttgttgatttaatggttgctagcaatgaaactgaaaatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgcattc 10861  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||| || |||||  ||||||  |||||| | |||||||||||||  |||||| | ||||| ||||||    
T  10860 ttgataatgatgatttgaaaaagttgattctagaagaaagtcacagaagtagcctaagtattcatccg 10793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 16601 - 16560
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  16601 tatttctggtagtggtattgcagtagatccgtctaaagttga 16560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 14340 - 14503
Alignment:
Q  23 ttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctga 122  Q
    |||| ||||| ||| ||| ||||||| ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||    
T  14340 ttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgtattcctga 14439  T
Q  123 caacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     || |||||  ||||||  |||||||| || ||||||||||| | |||||| ||||| ||||||    
T  14440 taatgatgatttgaaaaagttgattttagaggaaagtcacaaaactagcttaagtattcatccg 14503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 22519 - 22682
Alignment:
Q  23 ttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctga 122  Q
    |||| ||||| ||| ||| ||||||| ||||||||| | |||| |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||    
T  22519 ttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgtattcctga 22618  T
Q  123 caacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     || |||||  ||||||  |||||||| || ||||||||||| | |||||| ||||| ||||||    
T  22619 taatgatgatttgaaaaagttgattttagaggaaagtcacaaaactagcttaagtattcatccg 22682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 3867 - 3752
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| || |||||  ||||||  |||||||| || ||||||||||||||||    
T  3867 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaagttgattttagaggaaagtcacaagagta 3768  T
Q  170 gcttgagtatccatcc 185  Q
    |||| ||||| |||||    
T  3767 gcttaagtattcatcc 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 823 - 985
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| ||||| ||| ||| || |||| |||| |||| |  ||| ||||| |||||||| || |||||||||||||||||||| |||||||||||    
T  823 tcaagtttgttgatttgatggttgctaataatgaaacggaagatattgacttcaaagttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 922  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    |||||| |  |||||| || |||  |||||| | |||||||||||||||||||||| ||||||    
T  923 tcctgatagtgatgagttggaaaagttgattctagaagaaagtcacaagagtagctagagtat 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 20239 - 20121
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    ||||| |||||||| || ||||| ||||| |||||||| |||||||| ||||||||||| |||||| ||||||  |||||||| ||||| ||||||||||    
T  20239 ttcaaagttgatgatcagggtgtattgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagagagtcacaaga 20140  T
Q  167 gtagcttgagtatccatcc 185  Q
    ||||||||||||| |||||    
T  20139 gtagcttgagtattcatcc 20121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 249737 - 249620
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || |||||  ||||||||||||| |||||||| ||||||||||| |||||| ||||||  |||||||| ||| |||||||    
T  249737 gtgacttcaaggttgatgatcagggtgttctgaggttcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaaaaaagtca 249638  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  249637 caagagtagtttgagtat 249620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 372 - 540
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||||||||||||| ||  |||||||||| | ||   | |||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  372 aagtttgtggatttaatggttactagtaatcaagcggagaatagtgatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtattc 471  T
Q  119 ctgacaacgatgagatgaaaagattga-ttttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| || ||  |||| |  |||| |||| ||||||||||| ||||| | ||||||||| ||||||    
T  472 ctgacaatgaagaattgaagaagttgatttttagaagaaagtcataagagcaacttgagtattcatccg 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 28341 - 28225
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| |||||||| || |||||| ||||||  |||||| |||| ||||||||||||||||    
T  28341 aaggttgatgatcagggtgtgttaaggttcagaggaagaatttgtattcctgataatgatgagttgaaaaagttgattctggaggaaagtcacaagagta 28242  T
Q  170 gcttgagtatccatccg 186  Q
    |||| ||||| ||||||    
T  28241 gcttaagtattcatccg 28225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 323828 - 323704
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| |||||||| ||||||||||||| |||  | |||||  ||||||  || |||||||| ||||||||    
T  323828 gtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattcttgatgatgatgatttgaaaaagttaattttggaggaaagtca 323729  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  323728 caagagtagcttgagtattcatccg 323704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 202634 - 202772
Alignment:
Q  46 aatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattga 145  Q
    ||||||||||||| |||||| |||||||||||||| || ||||||||||| ||| | || |||||||| |||||||| || |||||| | ||||  ||||    
T  202634 aatcaaactgaagatggtgacttcaaggttgatgatcaaggtgtgttgagattccgcggtagaatttgtattcctgataatgatgagttaaaaaagttga 202733  T
Q  146 ttttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    |||| |||||||||||||  |||||||| ||||| ||||    
T  202734 ttttagaagaaagtcacagaagtagcttaagtattcatc 202772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 491 - 324
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| |||   ||||| |||| || | | |||| |||||||||||||| || ||||| ||||| |||||||| |||||||  ||||    
T  491 aagtttgttgatttaatggttgcgggtaatgaaacagaggatagtgacttcaaggttgatgaccagggtgtattgagattcagaggtagaatttatattc 392  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || || ||  ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||    
T  391 ctgaaaatgaagaattgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccg 324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 51025 - 51167
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||| |||||| || | |||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |  |||||  ||||||      
T  51025 tagtaatgaaactggagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgatagtgatgatttgaaaaag 51124  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    |||||||| |||||||||||||  |||| ||| ||||| ||||    
T  51125 ttgattttagaagaaagtcacagaagtaacttaagtattcatc 51167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 9947 - 10112
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || ||| |||||||| |||| ||| | |||| |||||||||||||| |  ||||||||||| ||| |||| |||||||| |||     
T  9947 aagtttgtggatttgttggttggtagtaatccaactaaagatagtgacttcaaggttgatgatctgggtgtgttgagattccgaggaagaatttgtattt 10046  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    |||| || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||    
T  10047 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatc 10112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 2704 - 2588
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    |||||||||||  | |||||||| ||||||||||| ||||||||||||||||| || |||||  |||||| ||||||||| || ||||||||||||||||    
T  2704 aaggttgatgattagggtgtgttaaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaaattgattttagaggaaagtcacaagagta 2605  T
Q  170 gcttgagtatccatccg 186  Q
    |||| | ||| ||||||    
T  2604 gcttaattattcatccg 2588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 3409 - 3505
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttg 113  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| || |||  ||||||||||||| || |||||||||||||||||||| ||||||||    
T  3409 tcaagtttgtggatttgatggttgctagtaatcaaactgaagatgttgacatcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttg 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 6420 - 6544
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||| || ||||| |||||||||||||||||  | |||||  ||||||  || ||||| || ||||||||    
T  6420 gtgacttcaaggttgatgatcagggtgtgttgagatttagaggaagaatttgcattcctgatgatgatgatttgaaaaagttaattttagaggaaagtca 6519  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  6520 caagagtagcttgagtattcatccg 6544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 30422 - 30518
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttg 113  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| || |||  ||||||||||||| || |||||||||||||||||||| ||||||||    
T  30422 tcaagtttgtggatttgatggttgctagtaatcaaactgaagatgttgacatcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttg 30518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 42041 - 41917
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||||||||||| |||||| |||||||| |||||| | || || ||| ||||||  |||||||| || ||||||||    
T  42041 gtgacttcaaggttgatgatcagggtgtgttgaggtccagaggaagaatttgtattcctaataatgacgagttgaaaaagttgattttagaggaaagtca 41942  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||| ||||| ||||||    
T  41941 caagagtagcttaagtattcatccg 41917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 21024 - 20900
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||| ||||| |||||||| |||||||| |||||| |||| || ||  ||||||  |||||||| |||||||||||    
T  21024 gtgacttcaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattccttacaatgaagaattgaaaaagttgattttagaagaaagtca 20925  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||| ||||||| ||||||    
T  20924 caagagtagcatgagtattcatccg 20900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 45641 - 45517
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || ||||| ||||| |||||| | |||||||| | || |||||| || ||  ||||||  |||||||| |||||||||||    
T  45641 gtgacttcaaggttgatgatcagggtgtattgagattcagatgtagaatttgtaatcttgacaatgaagaattgaaaaagttgattttagaagaaagtca 45542  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  45541 caagagtagcttgagtattcatccg 45517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 20631 - 20747
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || ||||||||||| |||||||| |||||||||||||||||  | |||||  ||||||  |||||||| ||| |||||||||||||||    
T  20631 aaggttgatgatcatggtgtgttgagattcagaggaagaatttgcattcctgatgatgatgatttgaaaaagttgattttagaaaaaagtcacaagagta 20730  T
Q  170 gcttgagtatccatccg 186  Q
    |||| ||||| ||||||    
T  20731 gcttaagtattcatccg 20747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 43950 - 43790
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| |||| || | ||||| | ||||| | | |||| |||||||||||||| || ||||| |||||||||||||| |||||||| ||||    
T  43950 aagtttgttgatttgatgactgctggtaatgacactgaggatagtgacttcaaggttgatgatcagggtgttttgaggttcagaggaagaatttgtattc 43851  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| |||||| |||| |  || ||| | ||||| |||||||||||||| ||||||||    
T  43850 ctgacaatgatgagttgaagaagttaattctagaagagagtcacaagagtagtttgagtat 43790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 13367 - 13200
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| | |||||   ||||| | | |||| || ||||| ||||| || |||||||||||||||||||| |||||||| ||||    
T  13367 aagtttgttgatttaatggttgctggtaatggcactgaggatagtgagtttaaggtggatgatcagggtgtgttgaggttcagaggaagaatttgtattc 13268  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||| || |||||  | ||||| || ||||| || |||||||||||||||||||| ||||| ||||||    
T  13267 ctgataatgatgatttcaaaaggttaattttagaggaaagtcacaagagtagcttaagtattcatccg 13200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 4639 - 4758
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    ||||||||||||||  | ||||| ||||| |||||||| |||||||| ||||||||||| || ||  ||||||  |||||||| ||||||||||| ||||    
T  4639 ttcaaggttgatgattagggtgtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaagaaagtcataaga 4738  T
Q  167 gtagcttgagtatccatccg 186  Q
    ||||||||||||| ||||||    
T  4739 gtagcttgagtattcatccg 4758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 11900 - 11734
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| | ||||| |||| || | | |||| |||||||||||||| || ||||| ||||| |||| ||| |||||||| ||||    
T  11900 aagtttgttgatttaatggttgctggtaatgaaacagaggatagtgacttcaaggttgatgatcagggtgtattgagattcataggtagaatttgtattc 11801  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 185  Q
    ||||||| || ||  ||||||  ||||| || ||||||||||| ||||||||||| ||||| |||||    
T  11800 ctgacaatgaagaattgaaaaagttgatcttagaagaaagtcataagagtagcttaagtattcatcc 11734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 48354 - 48512
Alignment:
Q  28 gatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacg 127  Q
    ||||| ||||||| | ||||| |||| || | | |||| || ||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||||| |    
T  48354 gatttgatgattgctggtaatgaaacagaggatagtgactttaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattcctgacaatg 48453  T
Q  128 atgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||  ||||||  |||||||| || |||||||| ||||||||||||||||| ||||||    
T  48454 aagaattgaaaaagttgattttagaggaaagtcataagagtagcttgagtattcatccg 48512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 100754 - 100848
Alignment:
Q  85 ggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||||||| |||||||| |||||||| |||||| |||| |||||| ||||||  |||||||| ||||||||||||||||||||||| |||||    
T  100754 ggtgtgttgagattcagaggaagaatttgtattcctaacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttaagtat 100848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 181340 - 181199
Alignment:
Q  45 taatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattg 144  Q
    |||||| ||||||| |||||| || ||||| ||||| || ||||||||||  ||| ||||| ||||||| ||||||||| | || |||||||| | | ||    
T  181340 taatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgaaattccgaggccgaatttgtattcctgacgatgaagagatgaagaaaatg 181241  T
Q  145 attttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| | ||||| ||||| |  |||||||||||||| ||||||    
T  181240 attcttgaagagagtcatagaagtagcttgagtattcatccg 181199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 13438 - 13603
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||||||| ||| |||||||   ||||| | | |||| ||||||||||||||| | ||||||||||| |||||||| |||||||||||||    
T  13438 aagtttgttgatttaatggttgctagtaatggcactgaggatagtgacttcaaggttgatgaaaagggtgtgttgagattcagaggaagaatttgcattc 13537  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
     |||  | |||||  ||||||  || ||| | || |||||||||||||||||||| ||||| ||||    
T  13538 ttgatgatgatgatttgaaaaagttaattctagaggaaagtcacaagagtagcttaagtattcatc 13603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 11968 - 12092
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || || || ||||| |||||||| |||||||| ||||||||||| || ||  ||||||  || ||||| || ||||||||    
T  11968 gtgacttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagatgaaagtca 12067  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  12068 caagagtagcttgagtattcatccg 12092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 5518 - 5642
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||| ||||||||  | || || ||||| |||||||| |||||||| ||||||||||| || ||  ||||||  |||||||| |||||||||||    
T  5518 gtgacttcaaagttgatgattagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaagaaagtca 5617  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  5618 caagagtagcttgagtattcatccg 5642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 6229 - 6315
Alignment:
Q  18 caagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagagg 104  Q
    ||||||||||||||||||| ||  ||||||||||||||||| |||||| ||||| |||||||| || |||||||| |||||||||||    
T  6229 caagtttgtggatttaatggttactagtaatcaaactgaagatggtgacttcaaagttgatgatcaaggtgtgttaaggttcagagg 6315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 6337 - 6213
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || || || ||||| |||||||  |||||||| ||||||||||| || ||  ||||||  || ||||| || ||||||||    
T  6337 gtgacttcaaggttgatgatcagggagtattgagattcagagatagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaggaaagtca 6238  T
Q  162 caagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||| ||||||    
T  6237 caagagtagcttgagtattcatccg 6213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 742 - 857
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || ||||| |||||||||||||| |||||||| |||||||| || || ||| ||||||  |||||||| || ||||||||||| ||||    
T  742 aaggttgatgatcaaggtgtattgaggttcagaggaagaatttgtattcctgataatga-gagttgaaaaagttgattttagaggaaagtcacaaaagta 840  T
Q  170 gcttgagtatccatccg 186  Q
    |||| ||||| ||||||    
T  841 gcttaagtattcatccg 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 13225 - 13065
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||| |||||||   ||||||| ||| | ||||| || ||||||||||| ||  |||| || ||||| ||||    
T  13225 aagtttgtggacttgttggttgctagtaatcagactgaagacagtgattttaagatcgatgatcaaggtgtgttgagatttcgaggtaggatttgtattc 13126  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    | ||||| ||||||||||| | | ||||| | ||||| ||||| |  |||| |||||||||    
T  13125 cagacaatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtat 13065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 10596 - 10763
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| || || ||||| | ||||| | | |||| || ||||||||||| || |||||| ||||||||||||| |||||||||||||    
T  10596 aagtttgttgatttgatggttattggtaatgacactgaggatagtgactttaaggttgatgatcagggtgtgctgaggttcagagggagaatttgcattc 10695  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |  | ||||   ||||||  || ||||| || |||||||||||||||||||| ||||| ||||||    
T  10696 ctaatgatgatggtttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatccg 10763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 20810 - 20977
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| ||||| ||| || || ||||| | ||||| | | |||| || ||||||||||| || |||||| ||||||||||||| |||||||||||||    
T  20810 aagtttgttgatttgatggttattggtaatgacactgaggatagtgactttaaggttgatgatcagggtgtgctgaggttcagagggagaatttgcattc 20909  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |  | ||||   ||||||  || ||||| || |||||||||||||||||||| ||||| ||||||    
T  20910 ctaatgatgatggtttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatccg 20977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 32501 - 32618
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||| ||||| || |||||  ||||||||||||| |||||||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||    
T  32501 gtgacttcaaggtagatgatcagggtgtaatgaggttcagaggaagaatttgtattcctgacaatgatgatttgaagaagttgattctagaagagagtca 32600  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  32601 caagagtagtttgagtat 32618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 4515 - 4652
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| |||||| || ||||||||||| || ||||||||||| ||| ||||  ||||||||||||||||| | || |||||||| | |    
T  4515 tagtaatcagactgaagatggtgactttaaggttgatgaccatggtgtgttgagattccgaggtcgaatttgcattcctgacgatgaagagatgaagata 4614  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | |||||  |||| |  ||||||||||||||    
T  4615 atgattcttgaagagggtcatagaagtagcttgagtat 4652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 81014 - 81131
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| |||||||||||||| || || || ||||| |||||||| |||||||| ||||||||||| || ||  ||||||  |||||| | ||||| |||||    
T  81014 gtgacttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattcttgaagagagtca 81113  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  81114 caagagtagtttgagtat 81131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 230187 - 230043
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aag 140  Q
    ||||||||| ||||||| ||||||||| ||| | ||||| || ||||||||||| ||| |||| |||||||  ||||| ||| | ||||||||||| |||    
T  230187 tagtaatcagactgaagatggtgattttaagatcgatgatcaaggtgtgttgagattccgaggtagaatttatattccagacgatgatgagatgaagaag 230088  T
Q  141 attgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || |||| | ||||||||||| |  |||||||||||||| ||||||    
T  230087 at-gattcttgaagaaagtcatagaagtagcttgagtattcatccg 230043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 218626 - 218723
Alignment:
Q  89 tgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||| ||| ||||||||||||| |||||||| || ||||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  218626 tgttgagattccgaggcagaatttgtattcctgataatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 218723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 1229 - 1373
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||||||   ||||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||||||| | ||||||||||| | |    
T  1229 tagtaatcagactgaagacagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattcctgacgatgatgagatgaagaaa 1328  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     |||| || ||||| ||||| | ||||||||||||||| ||||||    
T  1329 atgatatttgaagagagtcataggagtagcttgagtattcatccg 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 5831 - 5788
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5831 tatttctagtggtggtattgcagtagatccatctaaagttgatg 5788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 12961 - 12918
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12961 tatttctagtggtggtattgcagtagatccatctaaagttgatg 12918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 5015 - 4871
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aag 140  Q
    ||||||||| ||||||| | |||| || ||  | ||||| || || |||||||| ||| ||| ||||||||| ||||| ||| | ||||||||||| |||    
T  5015 tagtaatcagactgaagatagtgactttaaaatcgatgatcaaggagtgttgagattccgagccagaatttgtattccagacgatgatgagatgaagaag 4916  T
Q  141 attgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  4915 a-tgattcttgaagagagtcatagaagtagcttgagtattcatccg 4871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 12145 - 12001
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aag 140  Q
    ||||||||| ||||||| | |||| || ||  | ||||| || || |||||||| ||| ||| ||||||||| ||||| ||| | ||||||||||| |||    
T  12145 tagtaatcagactgaagatagtgactttaaaatcgatgatcaaggagtgttgagattccgagccagaatttgtattccagacgatgatgagatgaagaag 12046  T
Q  141 attgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  12045 a-tgattcttgaagagagtcatagaagtagcttgagtattcatccg 12001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 10604 - 10501
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||||||||||| |||||| ||||||||||||||  | ||||||||||| | | ||||||||||||| || |    
T  10604 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatgaaggtgtgttgagataccgaggcagaatttgtatcc 10505  T
Q  119 ctga 122  Q
    ||||    
T  10504 ctga 10501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 15895 - 16012
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||| || || ||| |||| |  |||||| | || || |||||    
T  15895 gtgattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtca 15994  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  15995 caagagtaggttgagtat 16012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 261427 - 261308
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    |||||||||||||| || || || ||||| |||||||| ||||||||  ||| |||||| || ||  ||||||  || ||||| |||||| |||||||||    
T  261427 ttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtgttcttgacaatgaagaattgaaaaagttaattttagaagaaggtcacaaga 261328  T
Q  167 gtagcttgagtatccatccg 186  Q
    ||||||||||||| ||||||    
T  261327 gtagcttgagtattcatccg 261308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 277992 - 278129
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||| ||||||| ||||||||  | || |||||||| | |    
T  277992 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggccgaatttgtattcctgatgatgaagagatgaagaaa 278091  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | ||||| ||||| |  ||||| ||||||||    
T  278092 atgattcttgaagagagtcatagaagtaggttgagtat 278129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 7327 - 7444
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    |||| ||||||||| |||| || |||||  ||||||||||||| ||| |||| ||||||||||| |||||  |||| |  |||||| | ||||| |||||    
T  7327 gtgacttcaaggtttatgatcagggtgttctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtca 7426  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  7427 caagagtaggttgagtat 7444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 31915 - 32059
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aag 140  Q
    ||||||||| ||||||| | ||||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||||||| | ||||||||||| |||    
T  31915 tagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattcctgacgatgatgagatgaagaag 32014  T
Q  141 attgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||||| | ||||| ||||| |  |||| ||||||||||||||||    
T  32015 a-tgattcttgaagagagtcatagaagtaacttgagtatccatccg 32059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 116071 - 116211
Alignment:
Q  46 aatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattg 144  Q
    ||||| ||||||| | |||| || ||||| ||||| || || |||||| | ||  ||||||||||||| ||||||||||| ||||||||||| |||| ||    
T  116071 aatcagactgaagatagtgactttaaggtcgatgatcagggagtgttgcgatttcgaggcagaatttgtattcctgacaatgatgagatgaagaaga-tg 116169  T
Q  145 attttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||| | ||||| |||||||  |||||||||||||| ||||||    
T  116170 attcttgaagagagtcacagaagtagcttgagtattcatccg 116211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 17116 - 17283
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||| ||||||| |  ||| |||||||||||||| || |  |||||| | ||| ||||||||||||| ||||    
T  17116 aagtttgtggacttgttggttgctagtaatcagactgaagataatgacttcaaggttgatgatcaggaggtgttgcgattctgaggcagaatttgtattc 17215  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     |||  | ||||||||||| |||| ||||| | ||||| |||||||| |||| ||||||||| ||||||    
T  17216 ttgaagatgatgagatgaagaaga-tgattcttgaagagagtcacaaaagtaacttgagtattcatccg 17283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 25079 - 25171
Alignment:
Q  94 aggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||||||| |||||||| |||||||| || |||||  ||||||  || ||||| || |||||||||||||||||||| ||||| ||||||    
T  25079 aggttcagaggaagaatttgtattcctgataatgatgatttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatccg 25171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 20513 - 20401
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    |||||||||||||| || |||||  ||||||||| ||| |||||||| |||||||| || |||||  |||| |  |||||| | ||||| ||||||||||    
T  20513 ttcaaggttgatgatcagggtgttctgaggttcataggaagaatttgtattcctgagaatgatgatttgaagaagttgattctagaagagagtcacaaga 20414  T
Q  167 gtagcttgagtat 179  Q
    |||| ||||||||    
T  20413 gtagtttgagtat 20401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 23333 - 23221
Alignment:
Q  67 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaaga 166  Q
    |||||||||||||| || |||||  ||||||||| ||| |||||||| |||||||| || |||||  |||| |  |||||| | ||||| ||||||||||    
T  23333 ttcaaggttgatgatcagggtgttctgaggttcataggaagaatttgtattcctgagaatgatgatttgaagaagttgattctagaagagagtcacaaga 23234  T
Q  167 gtagcttgagtat 179  Q
    |||| ||||||||    
T  23233 gtagtttgagtat 23221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 39921 - 40065
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| | |||| |||||||||||||| || || |||||||| ||  |||| |||||||| |||||| | || |||||  ||||||      
T  39921 tagtaatcagactgaagatagtgacttcaaggttgatgatcaaggcgtgttgagatttcgaggaagaatttgtattccttataatgatgaattgaaaaag 40020  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||| ||||| | |||||  |||||||| ||||| ||||||    
T  40021 ttgattttagaagatattcacagaagtagcttaagtattcatccg 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 11336 - 11503
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || ||| ||||||||  ||||||| | |||| ||||| || ||||| || || |||||||| ||| |||| |||||||| ||||    
T  11336 aagtttgtggatttgttggttgctagtaatccgactgaagatagtgacttcaaagtcgatgatcaaggagtgttgagattctgaggtagaatttgtattc 11435  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||| | ||||||||||| |||| ||| | |  |||| |||||||  |||||||||||||||||||||    
T  11436 cagacgatgatgagatgaagaaga-tgactcttaaagagagtcacagaagtagcttgagtatccatccg 11503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 17528 - 17695
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||||||  || ||| ||||||||  ||||||| | |||| ||||| || ||||| || || |||||||| ||| |||| |||||||| ||||    
T  17528 aagtttgtggatttgttggttgctagtaatccgactgaagatagtgacttcaaagtcgatgatcaaggagtgttgagattctgaggtagaatttgtattc 17627  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||| | ||||||||||| |||| ||| | |  |||| |||||||  |||||||||||||||||||||    
T  17628 cagacgatgatgagatgaagaaga-tgactcttaaagagagtcacagaagtagcttgagtatccatccg 17695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 11087 - 11131
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||| || |||||||||||||||||||||||    
T  11087 tatttctggtagtggtatcgcggtagatccatctaaagttgatgt 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 17279 - 17323
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||| || |||||||||||||||||||||||    
T  17279 tatttctggtagtggtatcgcggtagatccatctaaagttgatgt 17323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 14245 - 14383
Alignment:
Q  46 aatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattg 144  Q
    ||||| ||||||| | |||| || ||||| ||||| || || |||||| ||||  ||||||||||||| ||||||||| | ||||||||||| |||| ||    
T  14245 aatcagactgaagatagtgactttaaggtcgatgatcagggagtgttgcggtttcgaggcagaatttgtattcctgactatgatgagatgaagaaga-tg 14343  T
Q  145 attttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||| | ||||| |||||||  |||||||||||||| ||||    
T  14344 attcttgaagagagtcacagaagtagcttgagtattcatc 14383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 17848 - 17681
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| ||||||||| ||||||| |  |||||| ||  | ||||| || || |||||||| ||| ||||||||||||| ||||    
T  17848 aagtttgtggacttgttggttgctagtaatcagactgaagataatgattttaaaatcgatgatcagggagtgttgagattctgaggcagaatttgtattc 17749  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||| | ||||||||||| | | ||||| | ||||| ||||| |  |||||||| ||||| ||||||    
T  17748 ctgacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttaagtattcatccg 17681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 66574 - 66407
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||  |||||||  ||||| || || |||||||| |||||||||||||| ||| ||||  | ||||||||    
T  66574 tcaagtttgtagacttgttggttgctagtaatcggactgaagacggtgactttaaagttgatgatcacggtgtgttgagattccgaggtcggatttgcat 66475  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||||||| | |  |||||||| | | ||||| | ||||| ||||| |  |||||||||||||||||||    
T  66474 tcctgacgatgtagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtatccatc 66407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 38982 - 39119
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| |||||| || ||| ||||||| || ||||||||||| ||| |||   ||||||| ||||||||| | || |||||||| | |    
T  38982 tagtaatcagactgaagatggtgactttaagcttgatgaccatggtgtgttgagattccgagatcgaatttgtattcctgacgatgaagagatgaagaaa 39081  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtat 179  Q
     ||||| | ||||| | ||| |  ||||||||||||||    
T  39082 atgattcttgaagagactcatagaagtagcttgagtat 39119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 16044 - 15877
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || |||  |||||||| || |||| | |||| ||||| || ||||| || ||||||||||| ||  |||  | |||||| ||||    
T  16044 aagtttgtggacttgttggttgcaagtaatcagacggaagatagtgacttcaaagtcgatgatcagggtgtgttgagatttcgagatataatttgtattc 15945  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||| ||||||||||||| | | ||||| | ||||| |||||||  |||||||||||||| ||||||    
T  15944 ctgacgacgatgagatgaagaaaatgattcttgaagagagtcacagaagtagcttgagtattcatccg 15877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 111834 - 111877
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  111834 tatttctggtggtggtattgcagtagatccctctaaagttgatg 111877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 112650 - 112794
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aag 140  Q
    ||||||||| ||||||| ||||||||| ||  | ||||| |  ||||||||||| ||| |||| |||||||| ||||| ||| | || |||||||| |||    
T  112650 tagtaatcatactgaagatggtgattttaaaatcgatgatcgaggtgtgttgagattccgaggtagaatttgtattccagacgatgaggagatgaagaag 112749  T
Q  141 attgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  112750 a-tgattcttgaagagagtcatagaagtagcttgagtattcatccg 112794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 102400 - 102233
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||  || ||| ||||||| | ||||||  | ||||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||    
T  102400 aagtttgtagatttgttggttgatagtaatgagactgaaaatagtgattttaaaatcgatgaccaaggtgtgttgagattccgaggtagaatttgtattc 102301  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||| | || |||||||| | | ||||| | ||||| ||||| |  |||||||||||||||||||||    
T  102300 ctgacgatgaggagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtatccatccg 102233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 103193 - 103152
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  103193 tatttctggtagtggtattgcagtagatccctctaaagttga 103152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 7183 - 7014
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||| ||||||||||||| ||||||||| || || ||||| |  ||||||||||| ||| ||||  ||||||| ||    
T  7183 tcaagtttgtagacttgttggttgctagcaatcaaactgaagatggtgattttaaagtcgatgaccttggtgtgttgagattccgaggtcgaatttgtat 7084  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||||  | || |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  7083 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccg 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 28057 - 27940
Alignment:
Q  62 gtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtca 161  Q
    ||||||||||| |||||||  | |||||  |||| |||||||| ||| |||| |||||||||||||||||  |||  |  |||||| | ||||| |||||    
T  28057 gtgatttcaagattgatgattagggtgtactgagattcagaggaagagtttgtattcctgacaacgatgaattgaggaagttgattcttgaagagagtca 27958  T
Q  162 caagagtagcttgagtat 179  Q
    ||||||||| ||||||||    
T  27957 caagagtagattgagtat 27940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 2075 - 1908
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||| |||||| | | ||||| ||||| | | |||| || || |||||||| || || |||||| | ||  ||||||||||||| ||||    
T  2075 aagtttgtagatttattgattggtggaaatcagactgaggatagtgactttaaagttgatgatcagggagtgttgcgatttcgaggcagaatttgtattc 1976  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     |||||| |||||||| || |||| ||||| | ||||| |||||||  |||||||||||||| ||||||    
T  1975 ttgacaatgatgagataaagaaga-tgattctcgaagagagtcacagaagtagcttgagtattcatccg 1908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 19229 - 19373
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| ||||||| |||||| || || |||||||| || |||| |||||||||| ||||  | ||||||||||||||| | |  |||||||| | |    
T  19229 tagtaatcagactgaagatggtgactttaaagttgatgaccatggtgcgttgaggttccgaggtcggatttgcattcctgacgatgcagagatgaagaaa 19328  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||| | ||||| |  |||||||||||||| ||||||    
T  19329 atgattcttgaatagagtcatataagtagcttgagtattcatccg 19373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 57186 - 57021
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| |||||  || ||| ||||||||| |||||||  ||||| || || || || || |||||||||||||| ||| ||||  | |||| |||    
T  57186 tcaagtttgtagatttgttggttgctagtaatcagactgaagacggtgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttacat 57087  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcca 182  Q
    ||||||| | |  |||||||| | | ||||| | ||||| ||||| |  |||||||||||||||||    
T  57086 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtatcca 57021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 196615 - 196721
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| |||||| || || |||||||| ||  |||||||||| ||| ||||  | ||||||||    
T  196615 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagttgatgaccatcgtgtgttgagattccgaggtcgtatttgcat 196714  T
Q  117 tcctgac 123  Q
    |||||||    
T  196715 tcctgac 196721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 8476 - 8366
Alignment:
Q  76 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 174  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| ||||| || ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  8476 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 8378  T
Q  175 agtatccatccg 186  Q
    ||||| ||||||    
T  8377 agtattcatccg 8366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 6322 - 6223
Alignment:
Q  85 ggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    |||||||||| |||  |||| || ||||||||||  ||||| ||||||||||| | | ||||| | ||||||||||| |  |||||||||||||||||||    
T  6322 ggtgtgttgaagtttcgaggtaggatttgcattctagacaatgatgagatgaagaaaatgattcttgaagaaagtcatagaagtagcttgagtatccatc 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 7181 - 7137
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||||||||||| ||| ||||||||||    
T  7181 tatttctggtagtggtattgcagtagatccgtcttaagttgatgt 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 10155 - 10322
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    |||||||| |||||| | |||| | | || || ||||||| | |||| || ||||| || || || || |||||| | ||| || |||||||||| ||||    
T  10155 aagtttgtagatttatttattggtggaaaccagactgaagatagtgactttaaggtcgacgatcagggagtgttgcgattccgaagcagaatttgtattc 10254  T
Q  119 ctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    ||||| ||||||| ||||| | | ||||| | ||||| |||||||  |||||||||||||| ||||||    
T  10255 ctgacgacgatgacatgaagaaaatgattcttgaagagagtcacagaagtagcttgagtatacatccg 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 9380 - 9424
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||    
T  9380 tatttctggtagtggtattgcggtagatccgtctaaagttgatgt 9424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 19746 - 19651
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa 137  Q
    ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||||||||| | || ||||||||    
T  19746 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtattcctgacgatgaagagatgaa 19651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 35170 - 35090
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctga 122  Q
    ||||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||||||||    
T  35170 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtattcctga 35090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 50576 - 50432
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||||||   ||||||| ||  ||||||| || ||||| ||||||||  |||| |||||||| ||||| ||  | ||||||||||| | |    
T  50576 tagtaatcagactgaagacagtgattttaaaattgatgatcaaggtgtattgaggtttcgaggtagaatttgtattccagaagatgatgagatgaagaaa 50477  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  50476 atgattcttgaagagagtcatagaagtagcttgagtattcatccg 50432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 20562 - 20518
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  20562 tatttctggtgatggtattgctgtagatccctctaaagttgatgt 20518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 35986 - 35942
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  35986 tatttctggtgatggtattgctgtagatccctctaaagttgatgt 35942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 2851 - 2894
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  2851 tatttctagtagtggtattgcagtagatccctctaaagttgatg 2894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 3622 - 3761
Alignment:
Q  45 taatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattg 144  Q
    |||||| ||||||||| ||||||| ||  | ||||  || |||| |||||| ||| |||| |||||||| |||||||||   |||||||||||||   ||    
T  3622 taatcagactgaaggtagtgattttaaaatcgatgctcaaggtgcgttgagattccgaggtagaatttgtattcctgacggtgatgagatgaaaaagatg 3721  T
Q  145 attttggaagaaagtcacaagagtagcttgagtatccatc 184  Q
    ||| | ||||| ||||| |  |||||||||||||| ||||    
T  3722 attcttgaagagagtcatagaagtagcttgagtattcatc 3761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 151069 - 151029
Alignment:
Q  198 atttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    |||||| || ||||||||||||||||||| |||||||||||    
T  151069 atttctggtagtggtattgcagtagatccgtctaaagttga 151029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 3337 - 3201
Alignment:
Q  43 agtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagat 142  Q
    |||||||| ||||||| |||||| || ||||| ||||| || ||||||||||| ||| ||||   |||||| ||||||||  | || |||||||| | |     
T  3337 agtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtttaatttgtattcctgatgatgaagagatgaagaaaa 3238  T
Q  143 tgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||| | ||||| ||||| |  ||||||||||||||    
T  3237 tgattcttgaagagagtcatagaagtagcttgagtat 3201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 487 - 455
Alignment:
Q  208 gtggtattgcagtagatccatctaaagttgatg 240  Q
    |||||||||||||||||||||||||||||||||    
T  487 gtggtattgcagtagatccatctaaagttgatg 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 178
Target Start/End: Complemental strand, 5174 - 5039
Alignment:
Q  43 agtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aaga 141  Q
    |||||||| ||||||| | |||| || ||||| ||||| || || |||||| | ||  ||||||||||||| ||||| ||| | ||||||||||| ||||    
T  5174 agtaatcagactgaagatagtgactttaaggtcgatgatcagggagtgttgcgttttcgaggcagaatttgtattccagacgatgatgagatgaagaaga 5075  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagta 178  Q
    | |||| | ||||| ||||| || |||||||||||||    
T  5074 t-gattcttgaagagagtcataaaagtagcttgagta 5039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 14825 - 14869
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||||||||||| ||||||||||||||    
T  14825 tatttctggtagtggtattgcagtagatccctctaaagttgatgt 14869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 15621 - 15715
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttg 113  Q
    ||||||||||| ||  || ||| ||||||||| ||||||| ||||||||| ||  | ||||| || || |||||||| ||| |||||||||||||    
T  15621 aagtttgtggacttgttggttgctagtaatcagactgaagatggtgattttaaaatcgatgatcagggagtgttgagattccgaggcagaatttg 15715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 411 - 367
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||    
T  411 tatttcttgtagtggtattgcattagatccatctaaagttgatgt 367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 40873 - 40781
Alignment:
Q  11 tggacatcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagag 103  Q
    |||| ||||||||||| ||||| ||| ||  ||  ||| ||||||||| |||||| |||||||||||| | || ||||||||||| |||||||    
T  40873 tggatatcaagtttgttgatttgatggttactaacaatgaaactgaagatggtgacttcaaggttgattatcagggtgtgttgagattcagag 40781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1715 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 72 - 13
Alignment:
Q  72 ggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatga 131  Q
    ||||||||| || |||||| ||||||||||||| ||| |||| ||||||||||| |||||    
T  72 ggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatga 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 1180 - 1223
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || |||||||||||||||||||||| ||||||||||    
T  1180 tatttctggtagtggtattgcagtagatccatcgaaagttgatg 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 17614 - 17571
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || ||||||||||||||||||| |||||||||||||    
T  17614 tatttctggtagtggtattgcagtagatccgtctaaagttgatg 17571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 16798 - 16655
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| || |||| | ||||||| ||  | ||||| || ||||| ||||||||  |||| |||||||||||||| ||| | | ||||||||| | |    
T  16798 tagtaatcagacagaagatagtgattttaaaatcgatgatcaaggtgtcttgaggtttcgaggtagaatttgcattccagacgatg-tgagatgaagaaa 16700  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  16699 atgattcttgaagagagtcatagaagtagcttgagtattcatccg 16655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 14416 - 14385
Alignment:
Q  209 tggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||||||||||||||||||||||||||||    
T  14416 tggtattgcagtagatccatctaaagttgatg 14385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 13612 - 13468
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||| ||  ||||| || || || ||||| ||||| |||||||| ||| ||||  | ||||||||||||||| | |  |||||||| | |    
T  13612 tagtaatcagactggagacggtgactttaaagtcgatgaccacggcgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaaa 13513  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  |||||||||||||| ||||||    
T  13512 atgattcttgaagagagtcatagaagtagcttgagtattcatccg 13468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 38294 - 38337
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || ||||||||||||||||||| |||||||||||||    
T  38294 tatttctggtagtggtattgcagtagatccgtctaaagttgatg 38337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 4309 - 4147
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    ||||||||||||| ||  || ||| ||||||||| ||||| | | |||| || |  |||||||| || |||||| |||| ||  ||||| ||||||| ||    
T  4309 tcaagtttgtggacttgttggttgctagtaatcagactgaggatagtgactttagagttgatgaccaaggtgtgctgagatttcgaggccgaatttgtat 4210  T
Q  117 tcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    || |||| | |||||||| || ||||| |||||||||||| ||||| |  ||||||||||||||    
T  4209 tcatgacgatgatgagattaagaagat-gattttggaagagagtcatagaagtagcttgagtat 4147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Complemental strand, 5061 - 5031
Alignment:
Q  208 gtggtattgcagtagatccatctaaagttga 238  Q
    |||||||||||||||||||||||||||||||    
T  5061 gtggtattgcagtagatccatctaaagttga 5031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 55715 - 55672
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttgatg 240  Q
    ||||||| || ||||||||||||||||||| |||||||||||||    
T  55715 tatttctggtagtggtattgcagtagatccctctaaagttgatg 55672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 2951 - 3113
Alignment:
Q  17 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 116  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| |||||| || || || ||||| || ||||||||||||||| ||||  | ||||| ||    
T  2951 tcaagtttgtagacttgttggttgctagtaataagactgaagatggtgactttaaagtcgatgaccatggtgtgttgaggttccgaggtcggatttgtat 3050  T
Q  117 tcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 179  Q
    ||||||| | |  |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  3051 tcctgacgatgtagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtat 3113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 20200 - 20154
Alignment:
Q  195 gctatttctagtggtggtattgcagtagatccatctaaagttgatgt 241  Q
    ||||||||| || ||||||||| ||||||||| ||||||||||||||    
T  20200 gctatttctggtagtggtattgtagtagatccgtctaaagttgatgt 20154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 6677 - 6718
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    |||| ||||| ||||||||||||||||||| |||||||||||    
T  6677 tattgctagtagtggtattgcagtagatccgtctaaagttga 6718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 726 - 685
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  726 tatttctggtagtggtattgcagtagatccgtctaaagttga 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 27377 - 27268
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaagattgattttggaagaaagtcacaagagta 169  Q
    ||||||||||| || |||||| ||||||||| ||| ||| |||| ||||||||  | |||||  |||| |  |||||| | || || |||||||||||||    
T  27377 aaggttgatgatcagggtgtgctgaggttcaaaggaagagtttgtattcctgatcatgatgatttgaagaagttgattcttgaggagagtcacaagagta 27278  T
Q  170 gcttgagtat 179  Q
    | ||||||||    
T  27277 ggttgagtat 27268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 50050 - 50009
Alignment:
Q  197 tatttctagtggtggtattgcagtagatccatctaaagttga 238  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  50050 tatttctcgtagtggtattgcagtagatccgtctaaagttga 50009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 896 - 864
Alignment:
Q  154 gaaagtcacaagagtagcttgagtatccatccg 186  Q
    |||||||||||||||||||||||||| ||||||    
T  896 gaaagtcacaagagtagcttgagtattcatccg 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 10086 - 9971
Alignment:
Q  70 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagt 168  Q
    ||||| ||||| || ||||||||||| ||| |||| |||||||| |||| |||| | ||||||||||| |||| ||||| | ||||| ||||| |  |||    
T  10086 aaggtcgatgaccaaggtgtgttgagattctgaggaagaatttgtattcatgacgatgatgagatgaagaaga-tgattcttgaagagagtcatagaagt 9988  T
Q  169 agcttgagtatccatcc 185  Q
    |||||||| || |||||    
T  9987 agcttgagcattcatcc 9971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 7030 - 7197
Alignment:
Q  19 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 118  Q
    ||||||||||| ||  || ||| |||| |||| ||||||| |  ||| || ||||| ||||| || || |||||| | ||  |||| |||||||| ||||    
T  7030 aagtttgtggacttgttggttgctagtgatcagactgaagataatgactttaaggtcgatgatcagggagtgttgcgtttttgaggtagaatttgtattc 7129  T
Q  119 ctgacaacgatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
    || || | ||||| ||||| |||| ||||| | ||||| |||||||  |||||||||||||||||||||    
T  7130 cttacgatgatgaaatgaagaaga-tgattcttgaagagagtcacagaagtagcttgagtatccatccg 7197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 26106 - 26250
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||||||   ||||||| ||  | ||||| || ||||||||||| ||  |||| |||||||| ||||| ||| | ||||||||||| | |    
T  26106 tagtaatcagactgaagacagtgattttaaaatcgatgatcaaggtgtgttgagatttcgaggtagaatttgtattccagacgatgatgagatgaagaaa 26205  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | ||||| ||||| |  | |||||||||||| ||||||    
T  26206 atgattcttgaagagagtcatagaaatagcttgagtattcatccg 26250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 32735 - 32879
Alignment:
Q  42 tagtaatcaaactgaaggtggtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaacgatgagatgaaaaga 141  Q
    ||||||||| |||||||  ||||| || || || || || |||||||||||||| ||| ||||  | ||||||||||||||| | |  |||||||| | |    
T  32735 tagtaatcagactgaagacggtgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaaa 32834  T
Q  142 ttgattttggaagaaagtcacaagagtagcttgagtatccatccg 186  Q
     ||||| | || || ||||| |  |||||||||||||| ||||||    
T  32835 atgattcttgaggagagtcatagaagtagcttgagtattcatccg 32879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University