View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7162_high_9 (Length: 206)

Name: NF7162_high_9
Description: NF7162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7162_high_9
NF7162_high_9
[»] scaffold1204 (2 HSPs)
scaffold1204 (1-199)||(1287-1485)
scaffold1204 (8-59)||(1464-1515)
[»] chr3 (13 HSPs)
chr3 (1-199)||(17759506-17759709)
chr3 (1-199)||(19060826-19061029)
chr3 (1-188)||(11401479-11401666)
chr3 (18-189)||(8603542-8603713)
chr3 (37-189)||(5229188-5229340)
chr3 (87-206)||(25105134-25105251)
chr3 (1-178)||(38376897-38377074)
chr3 (1-53)||(11516772-11516824)
chr3 (1-55)||(17392283-17392337)
chr3 (1-59)||(17759688-17759746)
chr3 (1-59)||(19061008-19061066)
chr3 (87-178)||(43428735-43428827)
chr3 (92-189)||(37917552-37917649)
[»] chr6 (16 HSPs)
chr6 (1-192)||(29161519-29161709)
chr6 (7-160)||(11373965-11374118)
chr6 (1-178)||(23220605-23220781)
chr6 (1-144)||(16135187-16135330)
chr6 (35-178)||(17084443-17084586)
chr6 (18-106)||(25650019-25650107)
chr6 (1-80)||(22594754-22594833)
chr6 (1-59)||(29161725-29161783)
chr6 (112-178)||(16375278-16375344)
chr6 (1-59)||(21930801-21930859)
chr6 (1-47)||(22594750-22594796)
chr6 (1-80)||(29161667-29161746)
chr6 (1-55)||(29161766-29161820)
chr6 (112-178)||(31162098-31162164)
chr6 (1-58)||(4172874-4172931)
chr6 (1-58)||(4228483-4228540)
[»] scaffold0317 (2 HSPs)
scaffold0317 (1-194)||(14920-15113)
scaffold0317 (20-80)||(15071-15131)
[»] chr7 (19 HSPs)
chr7 (1-206)||(21676015-21676220)
chr7 (1-160)||(45148447-45148606)
chr7 (1-189)||(16382452-16382640)
chr7 (1-189)||(28719359-28719547)
chr7 (37-206)||(8564683-8564852)
chr7 (1-189)||(4483632-4483820)
chr7 (1-194)||(39292853-39293045)
chr7 (67-174)||(21539328-21539435)
chr7 (1-124)||(46472869-46472991)
chr7 (63-163)||(13617699-13617799)
chr7 (1-80)||(21676178-21676257)
chr7 (1-163)||(44306323-44306486)
chr7 (1-80)||(44306444-44306523)
chr7 (95-177)||(15979191-15979273)
chr7 (9-187)||(16369517-16369695)
chr7 (1-81)||(16369660-16369740)
chr7 (1-80)||(39293003-39293082)
chr7 (1-80)||(16382415-16382494)
chr7 (1-59)||(21676236-21676294)
[»] chr8 (24 HSPs)
chr8 (1-189)||(25756893-25757081)
chr8 (1-192)||(25294873-25295064)
chr8 (2-189)||(45560292-45560479)
chr8 (1-189)||(11543418-11543605)
chr8 (1-178)||(3845231-3845406)
chr8 (2-162)||(25608962-25609111)
chr8 (1-189)||(22312573-22312760)
chr8 (1-178)||(19332702-19332898)
chr8 (1-163)||(20177084-20177247)
chr8 (1-163)||(20221811-20221974)
chr8 (1-59)||(25608924-25608982)
chr8 (1-50)||(16000944-16000993)
chr8 (1-80)||(20177205-20177284)
chr8 (1-80)||(20221932-20222011)
chr8 (82-189)||(24238579-24238686)
chr8 (74-189)||(22498463-22498577)
chr8 (93-178)||(7469159-7469245)
chr8 (1-59)||(19332877-19332935)
chr8 (1-59)||(24238449-24238507)
chr8 (1-80)||(16000907-16000986)
chr8 (1-80)||(25756856-25756935)
chr8 (85-188)||(37654832-37654933)
chr8 (1-35)||(24238486-24238520)
chr8 (63-189)||(33171137-33171261)
[»] chr5 (9 HSPs)
chr5 (1-189)||(21108413-21108601)
chr5 (9-192)||(14342838-14343021)
chr5 (1-194)||(20455166-20455359)
chr5 (1-189)||(11964854-11965042)
chr5 (63-159)||(20833214-20833309)
chr5 (87-206)||(33627563-33627681)
chr5 (63-163)||(23414099-23414199)
chr5 (85-189)||(24226660-24226764)
chr5 (1-53)||(11764773-11764824)
[»] chr4 (14 HSPs)
chr4 (18-178)||(12134837-12134997)
chr4 (1-206)||(17376617-17376819)
chr4 (1-194)||(5371768-5371960)
chr4 (16-178)||(19558251-19558413)
chr4 (1-189)||(54364646-54364834)
chr4 (87-163)||(49070727-49070803)
chr4 (1-158)||(14570160-14570317)
chr4 (112-189)||(17213045-17213122)
chr4 (87-174)||(16226363-16226449)
chr4 (1-47)||(19558273-19558319)
chr4 (87-189)||(24237789-24237891)
chr4 (85-162)||(15014492-15014567)
chr4 (45-189)||(19082257-19082401)
chr4 (87-163)||(47469537-47469611)
[»] scaffold0079 (3 HSPs)
scaffold0079 (1-194)||(5193-5386)
scaffold0079 (1-59)||(5365-5423)
scaffold0079 (1-59)||(5402-5460)
[»] chr2 (14 HSPs)
chr2 (39-189)||(6093775-6093925)
chr2 (1-206)||(22331623-22331828)
chr2 (1-189)||(18534731-18534919)
chr2 (1-188)||(24561946-24562133)
chr2 (85-189)||(43641704-43641808)
chr2 (102-206)||(45618405-45618509)
chr2 (85-188)||(19434653-19434756)
chr2 (2-80)||(22331587-22331665)
chr2 (37-164)||(20272299-20272426)
chr2 (39-102)||(45618691-45618754)
chr2 (16-69)||(6093723-6093776)
chr2 (1-55)||(20272300-20272354)
chr2 (1-174)||(24840708-24840876)
chr2 (1-53)||(29113148-29113200)
[»] scaffold0183 (1 HSPs)
scaffold0183 (1-194)||(9715-9909)
[»] chr1 (7 HSPs)
chr1 (1-189)||(33396204-33396393)
chr1 (1-122)||(77184-77305)
chr1 (1-80)||(20821859-20821938)
chr1 (1-177)||(20821896-20822068)
chr1 (37-154)||(21224123-21224241)
chr1 (85-163)||(8539173-8539249)
chr1 (85-163)||(8604412-8604488)
[»] scaffold0090 (5 HSPs)
scaffold0090 (1-189)||(5718-5906)
scaffold0090 (16-189)||(1338-1511)
scaffold0090 (7-189)||(35884-36064)
scaffold0090 (1-43)||(1447-1489)
scaffold0090 (1-53)||(35982-36034)
[»] scaffold0017 (1 HSPs)
scaffold0017 (10-189)||(11494-11674)
[»] scaffold0231 (2 HSPs)
scaffold0231 (1-155)||(14075-14229)
scaffold0231 (19-59)||(14208-14248)
[»] scaffold0153 (1 HSPs)
scaffold0153 (76-189)||(755-868)
[»] scaffold0057 (1 HSPs)
scaffold0057 (87-189)||(4845-4947)
[»] scaffold0009 (6 HSPs)
scaffold0009 (1-59)||(255644-255702)
scaffold0009 (1-59)||(255570-255628)
scaffold0009 (20-80)||(255660-255720)
scaffold0009 (1-47)||(98324-98370)
scaffold0009 (1-59)||(255607-255665)
scaffold0009 (1-41)||(255551-255591)
[»] scaffold0468 (1 HSPs)
scaffold0468 (72-157)||(12200-12284)
[»] scaffold0174 (2 HSPs)
scaffold0174 (1-189)||(21162-21349)
scaffold0174 (1-80)||(21307-21386)
[»] scaffold0049 (1 HSPs)
scaffold0049 (95-189)||(34627-34720)
[»] scaffold0088 (1 HSPs)
scaffold0088 (63-189)||(44772-44900)
[»] scaffold0013 (1 HSPs)
scaffold0013 (73-189)||(8304-8420)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-158)||(247059-247216)
[»] scaffold0601 (1 HSPs)
scaffold0601 (88-163)||(2205-2280)
[»] scaffold0452 (1 HSPs)
scaffold0452 (170-206)||(8598-8634)


Alignment Details
Target: scaffold1204 (Bit Score: 179; Significance: 8e-97; HSPs: 2)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 1485 - 1287
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1485 tatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 1386  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttagagagca 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1385 atcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacacaccatgataaacatcgtattcaacacttagagagca 1287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 1515 - 1464
Alignment:
Q  8 attcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    ||||||| | |||||||||| |||| || |||||||||||||||||||||||    
T  1515 attcaccgataatatcacaatcaattaacatatatgtattcaccaacaatat 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17759709 - 17759506
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaa----catcaa 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    ||||||    
T  17759709 tatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatgcaatattcaacatgcatcaa 17759610  T
Q  97 ctatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgat-aaacatcgtaatcaacacttagag 195  Q
    |||||||||| | || |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| || ||| |||||||||||||    
T  17759609 ctatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacacaccatgataaaaaattgtattcaacacttagag 17759510  T
Q  196 agca 199  Q
    ||||    
T  17759509 agca 17759506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 19061029 - 19060826
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaa----catcaa 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    ||||||    
T  19061029 tatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaacaagatcctcatcaattaacatatatgcaatattcaacatgcatcaa 19060930  T
Q  97 ctatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgat-aaacatcgtaatcaacacttagag 195  Q
    |||||||||| | || |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| || ||| |||||||||||||    
T  19060929 ctatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacacaccatgataaaaaattgtattcaacacttagag 19060830  T
Q  196 agca 199  Q
    ||||    
T  19060829 agca 19060826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 11401479 - 11401666
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||||||   |||||||||||||||||||| || |||||||||||| |    
T  11401479 tatatgcattcaccgacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaacttt 11401578  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaaca 188  Q
    |||||| |||||||||||| |||| | ||||||||||| ||||| || ||||||| ||| ||||  |||||||||||| || ||||||    
T  11401579 atcatatagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaacacagcacattatgataaacatcatattcaaca 11401666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 8603542 - 8603713
Alignment:
Q  18 aatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaa 117  Q
    |||||||||| ||||  ||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  8603542 aatatcacaatcaattgatatatatgtattcaccaacaatatccttatcaattaacacatatgcattattcaacatcaactatatcatatagttcaacaa 8603641  T
Q  118 ctccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |  ||||   ||||||||||||||||| || |||||||||||||||   |||||||||||| || |||||||    
T  8603642 catcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacac 8603713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 5229340 - 5229188
Alignment:
Q  37 atatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcaca 136  Q
    ||||||| ||||||| |||||||    |||||| |||||||||||| || || |||||||||||||||||  ||||||||||||||||   |||||||||    
T  5229340 atatatgcattcaccgacaatatcacaatcaatcaacatatatgcattaatcgacatcaactatatcatattgttcaacaactccatacgatttctcaca 5229241  T
Q  137 atccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    || ||||| || ||||||||||||||||  |||||||||||| || |||||||    
T  5229240 attcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 5229188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 25105251 - 25105134
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaa 186  Q
    ||||| |||||||||||||  ||||||||||||||||| | |||| |||||| ||||| || |||||||||||  ||||| |||||||||||||| || |    
T  25105251 tcaacttcaactatatcatttagttcaacaactccatacaatttcccacaattcaagtaaaggagaaaataca--acaccgtgataaacatcgtattcga 25105154  T
Q  187 cacttagagagcactcacat 206  Q
    ||||||||||||| ||||||    
T  25105153 cacttagagagcattcacat 25105134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 38377074 - 38376897
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||  |||||||||||| |||| || ||| |||||||||||||||||||  | |||||| ||||||||   | |   ||||||| ||| |    
T  38377074 tatatgcattcactgacaatatcacaatcaattaacatacatgtattcaccaacaatatcataatcaatcaacatatacatattcaccaacatcgacttt 38376975  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    ||||||   |||||||||  |||||  ||||||| ||||||||| || ||||||||| |||||   ||||||||||||    
T  38376974 atcatatgattcaacaacatcatattatttctcaaaatccaagtaaaggagaaaatataacaccttatgataaacatc 38376897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11516824 - 11516772
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaa 53  Q
    ||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||    
T  11516824 tatatgtattcaccaacaacatctcaatcaatcaacatatatgtattcaccaa 11516772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17392283 - 17392337
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaaca 55  Q
    ||||||||||||||||||| |||||||  |||||| |||||||||||||| ||||    
T  17392283 tatatgtattcaccaacaacatcacaataaatcaacatatatgtattcactaaca 17392337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17759746 - 17759688
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| |||| || |||||||||||| |||| || |||||||||||||||||||||||    
T  17759746 tatatgcattctccgacaatatcacaatcaatgaacatatatgtattcaccaacaatat 17759688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19061066 - 19061008
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| |||| || |||||||||||| |||| || |||||||||||||||||||||||    
T  19061066 tatatgcattctccgacaatatcacaatcaatgaacatatatgtattcaccaacaatat 19061008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 43428827 - 43428735
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaaga-gaaaatacaacacaccatgataaacatc 178  Q
    ||||| || ||||||||||| ||||||||||||||||| | ||||||| ||| ||||| | ||| |||||||||| ||   ||||||||||||    
T  43428827 tcaacttccactatatcatatagttcaacaactccatacaatttctcataatacaagtaatagaggaaaatacaataccttatgataaacatc 43428735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 37917649 - 37917552
Alignment:
Q  92 atcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||||  |||||| | |||||||||  |||||  |||||||| |||||| | || ||||||||||  ||||| |||||||||||| || |||||||    
T  37917649 atcaacttcatcatataattcaacaacatcatatgatttctcaccatccaaataaaggagaaaatactccacactatgataaacatcatattcaacac 37917552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 29161709 - 29161519
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  29161709 tatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcatcatcaattaacatatatgcaatattcaacatcaactat 29161610  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacactta 192  Q
    |||||| ||||| ||||||||||||||||| |||| |||||||| || ||||||||||  ||||  |||||||||||| || ||||||||||    
T  29161609 atcatatagttcgacaactccatatactttttcac-atccaagtaaaggagaaaatacttcacattatgataaacatcatattcaacactta 29161519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 11374118 - 11373965
Alignment:
Q  7 tattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcata 106  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11374118 tattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcaatattcaacatcaactatatcata 11374019  T
Q  107 gagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaa 160  Q
     ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||    
T  11374018 tagttcaacaactctatatactatctcacaatccaagtaaaggagaaaatacaa 11373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 23220605 - 23220781
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| ||||||||| || |||| || |||||||||||||||||||||||    |||||| |||||||||||| || ||||||||||||||    
T  23220605 tatatgcattcaccgacaatatcataatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaactat 23220704  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    |||||| |||||||||||| |||||| ||||||||||| ||||| || ||||||||  ||||||  ||||||||||||    
T  23220705 atcatatagttcaacaact-catataatttctcacaattcaagtaaaggagaaaatgaaacacattatgataaacatc 23220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16135187 - 16135330
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctca-tcaattaacatatatgcaatattcaacatcaacta 99  Q
    |||||| ||||||| |||||||||||| |||| || ||||||||||||||||||||||| | || ||||| |||||||||||| || |||||||||||||    
T  16135187 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatat-cacagtcaatcaacatatatgcattaatcaacatcaacta 16135285  T
Q  100 tatcatagagttcaacaactccatatactttctcacaatccaagt 144  Q
    ||||||| ||||||| ||||||||| | |||||||||||||||||    
T  16135286 tatcatatagttcaataactccatacaatttctcacaatccaagt 16135330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 35 - 178
Target Start/End: Complemental strand, 17084586 - 17084443
Alignment:
Q  35 atatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctca 134  Q
    |||||||| |||||||||| | |||    |||||| |||||||||||| || ||||||| |||||||||||| ||||||||||||||||| | |||||||    
T  17084586 atatatatatattcaccaatagtatcacaatcaatcaacatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctca 17084487  T
Q  135 caatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    |||| ||||| || ||||||||||||||||  ||||||||||||    
T  17084486 caatacaagtaaatgagaaaatacaacacattatgataaacatc 17084443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 25650019 - 25650107
Alignment:
Q  18 aatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcata 106  Q
    |||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||    
T  25650019 aatatcgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcactattcaacatcaactacatcata 25650107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22594833 - 22594754
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    |||||| ||||||||||    
T  22594833 tatatgtattcaccaataatatcacaatcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 22594754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29161783 - 29161725
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  29161783 tatatgtattcaccaacagtatcacaaccaatcaacatatatatattcaccgacaatat 29161725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 16375278 - 16375344
Alignment:
Q  112 caacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    |||||||| |||| | ||||||||||| ||||| || ||||||||||||||||| ||||||||||||    
T  16375278 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacactatgataaacatc 16375344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21930801 - 21930859
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||||||||    
T  21930801 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatat 21930859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22594796 - 22594750
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtatt 47  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  22594796 tatatgtattcaccaacaatatcacaatcaatcaacatatatgtatt 22594750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29161746 - 29161667
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    ||||| |||||||| |||||||| ||| | ||||| |||||||||||||||||||||||    |||||| ||||||||||    
T  29161746 tatatatattcaccgacaatatctcaatccatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 29161667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29161820 - 29161766
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaaca 55  Q
    |||||| ||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  29161820 tatatgcattcaccgacaatatcccaatcaatcaacatatatgtattcaccaaca 29161766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 31162164 - 31162098
Alignment:
Q  112 caacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    |||||||| |||| | ||||||||||| ||||| || |||||||||||||||   ||||||||||||    
T  31162164 caacaacttcatacagtttctcacaattcaagtaaaggagaaaatacaacaccttatgataaacatc 31162098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4172931 - 4172874
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaata 58  Q
    |||||| |||||||||||||||||| | || | || ||||||| ||||||||||||||    
T  4172931 tatatgcattcaccaacaatatcaccatcatttaacatatatgcattcaccaacaata 4172874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4228540 - 4228483
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaata 58  Q
    |||||| |||||||||||||||||| | || | || ||||||| ||||||||||||||    
T  4228540 tatatgcattcaccaacaatatcaccatcatttaacatatatgcattcaccaacaata 4228483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 122; Significance: 9e-63; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 15113 - 14920
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||   |||||||||||||||||||| || || |||||||||||    
T  15113 tatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcgacatcaactat 15014  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttaga 194  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || ||||||| ||||    
T  15013 atcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacctaga 14920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 15131 - 15071
Alignment:
Q  20 tatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||| |||| || |||||||||||||||||||||||    |||||| ||||||||||    
T  15131 tatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 15071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 9e-63; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21676220 - 21676015
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| |||||||||||||||  ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21676220 tatatgcattcaccaacaatattgcaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactat 21676121  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttagagagcac 200  Q
    |||||| ||||||||||||||||| | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || ||||||| || | ||||     
T  21676120 atcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacctataaagcat 21676021  T
Q  201 tcacat 206  Q
    ||||||    
T  21676020 tcacat 21676015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45148447 - 45148606
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||    
T  45148447 tatatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccagcaatatcctcatcaattaacatatatgcaatattcaacatcaattat 45148546  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaa 160  Q
    ||| || ||||||||||||||||||||| |||||||| |||||| || ||||||||||||    
T  45148547 atcttatagttcaacaactccatatactatctcacaaaccaagtaaatgagaaaatacaa 45148606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 16382452 - 16382640
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||    ||  || |||||||||| |||||||||||||||||||    
T  16382452 tatatgtatccaccaacaatatcacaatcaataaacatatatgtattcaccaacaatatcacaatatatcaacatatatgtaatattcaacatcaactat 16382551  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||||||   || ||||||||| || |||||||    
T  16382552 atcatatagttcaacaactccatatactttctcataatccaagtaaaggagaaaatacaacaccttataataaacatcatattcaacac 16382640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28719359 - 28719547
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||||||||    |||||| |||||||||||| || |||||||||||| |    
T  28719359 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaactct 28719458  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||| | ||||||| ||| ||||| |||||||||||||||||||  |||||||||||| || |||||||    
T  28719459 atcatatagttcaacaactccatacaatttctcaaaattcaagtaaaagagaaaatacaacacattatgataaacatcatattcaacac 28719547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 37 - 206
Target Start/End: Complemental strand, 8564852 - 8564683
Alignment:
Q  37 atatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcaca 136  Q
    ||||||| ||||||| |||||||    ||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||   |||||||||    
T  8564852 atatatgcattcaccgacaatatcacaatcaattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatacgatttctcaca 8564753  T
Q  137 atccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttagagagcactcacat 206  Q
    || ||||| || ||||| ||||||||||| |||||||||||| || ||| |||||||| |||| ||||||    
T  8564752 attcaagtaaaggagaacatacaacacacaatgataaacatcatattcagcacttagaaagcattcacat 8564683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 4483632 - 4483820
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| ||||||| |||| | || || ||||||||||||| |||||||||    |||||| |||||||||||| || ||||||||||||||    
T  4483632 tatatgcattcaccgacaatattacaatccattaacatatatgtattcaacaacaatatcacaatcaatcaacatatatgcattaatcaacatcaactat 4483731  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||| | ||||||||||| ||| | || | |||||||||||| |  |||||||||||| || |||||||    
T  4483732 atcatatagttcaacaactccatacaatttctcacaattcaaataaaggggaaaatacaacatattatgataaacatcatattcaacac 4483820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 39293045 - 39292853
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||| |||||| ||| |||||||||| ||||||| ||||||||||| |||||||||||   ||||||||| |||| ||||| || ||||||| |||||     
T  39293045 tatatttattcatcaaaaatatcacaatcaatcaacatatatgtatttaccaacaatatcaccatcaattagcatacatgcattaatcaacat-aactag 39292947  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttaga 194  Q
    ||||||  |||||||||||||||| | ||||||||||| || || || |||| |||||||||||  |||||||||||| || ||||||| ||||    
T  39292946 atcatatggttcaacaactccatacaatttctcacaatacacgtaaaggagagaatacaacacattatgataaacatcatattcaacacctaga 39292853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 21539435 - 21539328
Alignment:
Q  67 aattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcac-aatccaagtcaaagagaaaatacaacacac 165  Q
    ||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||| || ||||||||||| ||||     
T  21539435 aattaacatgtatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaaatccaagt-aaggagaaaatacatcacat 21539337  T
Q  166 catgataaa 174  Q
    |||||||||    
T  21539336 catgataaa 21539328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 46472869 - 46472991
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||| |||||||||| ||||||| || ||||||| |||||||||||  | ||||||||   |||||||||| ||||||||| || ||||||| ||||||    
T  46472869 tatatctattcaccaataatatcataatcaatcaacatatatgtattttc-aacaatatcaccatcaattaaaatatatgcattaatcaacataaactat 46472967  T
Q  101 atcatagagttcaacaactccata 124  Q
    |||||| |||||||||||||||||    
T  46472968 atcatatagttcaacaactccata 46472991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 13617699 - 13617799
Alignment:
Q  63 catcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaaca 162  Q
    |||||||| | |||||| || || |||||||||||||||| ||| || |||||||||||||| ||||||||||| ||||||| || ||||||||||||||    
T  13617699 catcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca 13617798  T
Q  163 c 163  Q
    |    
T  13617799 c 13617799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21676257 - 21676178
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    ||||||||| |||||||||||||||||||||  || ||||||| ||||||||||||||||   |||||| ||||||||||    
T  21676257 tatatgtatccaccaacaatatcacaaccaacaaacatatatgcattcaccaacaatattgcaatcaatcaacatatatg 21676178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 44306486 - 44306323
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||| |||||| |||||    || ||| |||||||||| | |   ||||||| |||      
T  44306486 tatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatgtattcaccaacatcgacttc 44306387  T
Q  101 atcatagagttcaacaactccatatactttctcacaa-tccaagtcaaagagaaaatacaacac 163  Q
    |||||| | |||||||||  |||||  |||||||||| | ||||| || |||||||||||||||    
T  44306386 atcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacac 44306323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44306523 - 44306444
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||||||| ||| |||||||||| ||||||| ||||||||||| |||||||||||    |||||| ||||||||||    
T  44306523 tatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 44306444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 15979273 - 15979191
Alignment:
Q  95 aactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacat 177  Q
    |||||||||||| |||||||||||| |||| | ||||||||||||||||| ||  |||||||||| ||||  | |||||||||    
T  15979273 aactatatcatatagttcaacaacttcatacaatttctcacaatccaagtaaagtagaaaatacatcacattaggataaacat 15979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 16369695 - 16369517
Alignment:
Q  9 ttcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcataga 108  Q
    ||||||||||||||||| | |||| || |||||||  ||||||||||||||   |||||||||| ||||||||  |   ||||||||||||  ||||| |    
T  16369695 ttcaccaacaatatcaccatcaattaacatatatgccttcaccaacaatataaccatcaattaatatatatgcgttcaccaacatcaactaagtcatata 16369596  T
Q  109 gttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaac 187  Q
     |||||||||| | ||   ||||||| |||| |||| | |||||||||||  || | ||||||| ||||| || |||||    
T  16369595 attcaacaacttcctaccatttctcataatcaaagtaagagagaaaatacgccatatcatgatacacatcatattcaac 16369517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16369740 - 16369660
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgc 81  Q
    |||||| ||||||| |||||||||| | |||| || |||||||  ||||||||||||||   |||||||||||||||||||    
T  16369740 tatatgcattcaccgacaatatcaccatcaattaacatatatgcgttcaccaacaatatcaccatcaattaacatatatgc 16369660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39293082 - 39293003
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||||||||||| |||||||||| ||||||| |||||| |||||| ||| |||||    |||||| ||||||||||    
T  39293082 tatatgtattcaccaataatatcacaatcaatcaacatatatttattcatcaaaaatatcacaatcaatcaacatatatg 39293003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16382415 - 16382494
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||| ||||||| |||||||||||  |||| || |||||||||| ||||||||||||    |||||| ||||||||||    
T  16382415 tatatgcattcaccgacaatatcacactcaattaacatatatgtatccaccaacaatatcacaatcaataaacatatatg 16382494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21676294 - 21676236
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| ||||||| |||||||||||| ||||  | |||||||||| ||||||||||||    
T  21676294 tatatgcattcaccgacaatatcacaatcaattgacatatatgtatccaccaacaatat 21676236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 25756893 - 25757081
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||   |||||||||||||||||||| || ||||||||||||||    
T  25756893 tatatgtattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactat 25756992  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||| | ||||||||||  ||||| || ||||||||||||||||  |||||||||||| || |||||||    
T  25756993 atcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 25757081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 25294873 - 25295064
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||||| |||||||||| ||||||| |||||||||||||||||||||||   |||||||||||||||||||| || ||||||||||||||    
T  25294873 tatatgaattcaccaaaaatatcacaatcaatcaacatatatgtattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactat 25294972  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacactta 192  Q
    |||||| ||||||||||||||||| | ||||||||||  ||||| || ||||||||||||||||  |||||||||||| || ||||||||||    
T  25294973 atcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacactta 25295064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 45560479 - 45560292
Alignment:
Q  2 atatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactata 101  Q
    ||||| ||||||| |||||||||||| |||| || |||||||||||||| ||||||||    |||||  |||||||||||| || |||||||||||||||    
T  45560479 atatgcattcaccgacaatatcacaatcaattaaaatatatgtattcacaaacaatatcacaatcaaacaacatatatgcattaatcaacatcaactata 45560380  T
Q  102 tcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    ||||| ||||||||||||||||| |  |||||||||||||||| || |||||||||||||||   |||||||||||| || |||||||    
T  45560379 tcatatagttcaacaactccatacaacttctcacaatccaagtaaaggagaaaatacaacactttatgataaacatcatattcaacac 45560292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11543418 - 11543605
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||||||||    |||||  |||||||||||| || ||||||||||||||    
T  11543418 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatataacaatcaaccaacatatatgcattaatcaacatcaactat 11543517  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| |||||||||||||||||   ||||||||||| |||||  | ||||| ||||||||    |||||||||||| || |||||||    
T  11543518 atcatatagttcaacaactccatactatttctcacaattcaagt-gaggagaagatacaacaatttatgataaacatcatattcaacac 11543605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 3845406 - 3845231
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| |||||||||||||||||  | ||||  | ||||||| |||||||  ||||||   ||||| |||||||||||||| || |||  |||||||||    
T  3845406 tatatgcattcaccaacaatatcaacatcaattgacatatatgcattcacc--caatatcaccatcacttaacatatatgcactaatcattatcaactat 3845309  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    |||||| ||||||||||||||||| | ||||||||||||||||| || ||||||||||| ||||  | ||||||||||    
T  3845308 atcatatagttcaacaactccatacaatttctcacaatccaagtaaaggagaaaatacatcacattaggataaacatc 3845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 25608962 - 25609111
Alignment:
Q  2 atatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactata 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||           |||| |||||||||| | || || ||||||||||||    
T  25608962 atatgtattcaccaacaatatcacaaccaatcaacatatatgtattcaccaac-----------caatcaacatatatgtattaatccacatcaactata 25609050  T
Q  102 tcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaaca 162  Q
    ||||| |||||||||||  ||||   ||||||||||||||||| || ||||||||||||||    
T  25609051 tcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 25609111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 22312573 - 22312760
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| ||||||| |||| ||||  | |||||||||||||||||||||||    |||||  |||||||||||| || ||||||||||||||    
T  22312573 tatatgcattcaccgacaatattacaatcaattgacatatatgtattcaccaacaatatcacaatcaaccaacatatatgcattaatcaacatcaactat 22312672  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| |||||||||||||||||   ||||||||||| |||||  | ||||| ||||||||    |||||||||||| || |||||||    
T  22312673 atcatatagttcaacaactccatactatttctcacaattcaagt-gaggagaagatacaacaatttatgataaacatcatattcaacac 22312760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 19332898 - 19332702
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctca-tcaattaacatatatg----------caatat--- 86  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||| ||||||||||          ||||||       
T  19332898 tatatgtattcacccacaatatcacaaccaatcaacatatatgtatttaccaacaatat-ctcaatcaatcaacatatatgtattcaccaacaatatcac 19332800  T
Q  87 ------tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
          |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||  |||||||||  ||||  ||||||||||||    
T  19332799 aaccaatcaacatcaactatatcatatagttcaacaactccatatacttcctcacaatccaagtaaagaagaaaatacttcacattatgataaacatc 19332702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20177247 - 20177084
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||| |||||| |||||    || ||| |||||||||| | |   ||||||| |||      
T  20177247 tatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatgtattcaccaacatcgacttc 20177148  T
Q  101 atcatagagttcaacaactccatatactttctcacaa-tccaagtcaaagagaaaatacaacac 163  Q
    |||||| | |||||||||  |||||  |||||||||| | ||||| || |||||||||||||||    
T  20177147 atcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacac 20177084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20221974 - 20221811
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||| |||||| |||||    || ||| |||||||||| | |   ||||||| |||      
T  20221974 tatatgtattgaccaacaatatcacaatcaatcaacatatatgtatccaccaataatataacaattaatcaacatatatgtattcaccaacatcgacttc 20221875  T
Q  101 atcatagagttcaacaactccatatactttctcacaa-tccaagtcaaagagaaaatacaacac 163  Q
    |||||| | |||||||||  |||||  |||||||||| | ||||| || |||||||||||||||    
T  20221874 atcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaacac 20221811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25608924 - 25608982
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  25608924 tatatgcattcaccgacaatatcacaaccaatcaacacatatgtattcaccaacaatat 25608982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16000944 - 16000993
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcac 50  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  16000944 tatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcac 16000993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20177284 - 20177205
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||||||| ||| |||||||||| ||||||| ||||||||||| |||||||||||    |||||| ||||||||||    
T  20177284 tatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 20177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20222011 - 20221932
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||||||| ||| |||||||||| ||||||| ||||||||||| |||||||||||    |||||| ||||||||||    
T  20222011 tatatgtattcatcaataatatcacaatcaatcaacatatatgtattgaccaacaatatcacaatcaatcaacatatatg 20221932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 24238579 - 24238686
Alignment:
Q  82 aatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgta 181  Q
    |||| |||||||||||||||| ||| |  ||||||||| |||||||||||||| ||||||||| ||  || |||||||||||   | ||||||| |||||    
T  24238579 aataatcaacatcaactatataatataactcaacaacttcatatactttctcataatccaagtaaagaagtaaatacaacacgttacgataaacctcgta 24238678  T
Q  182 atcaacac 189  Q
     |||||||    
T  24238679 ttcaacac 24238686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 22498577 - 22498463
Alignment:
Q  74 atatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataa 173  Q
    |||||| || || |||||||||||||||| ||| |||||||| |||||||| || |||||| | |||||||  | |||||||||||||||    ||||||    
T  22498577 atatatacattaatcaacatcaactatataatatagttcaaccactccatacac-ttctcatattccaagtataggagaaaatacaacaccttgtgataa 22498479  T
Q  174 acatcgtaatcaacac 189  Q
    ||||| || |||||||    
T  22498478 acatcatattcaacac 22498463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 7469159 - 7469245
Alignment:
Q  93 tcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaaga-gaaaatacaacacaccatgataaacatc 178  Q
    |||||||||||||| ||||||||||||||||| |  |||||| ||| ||||| || || |||||||||||||   ||||||||||||    
T  7469159 tcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatgataaacatc 7469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19332935 - 19332877
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| ||||||| |||||||||||| |||| || ||||||||||||||| |||||||    
T  19332935 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcacccacaatat 19332877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24238449 - 24238507
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| ||||||| |||||||||||| |||| ||  ||||||||||||||||||||||    
T  24238449 tatatgcattcaccgacaatatcacaatcaattaacttatatgtattcaccaacaatat 24238507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16000907 - 16000986
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||| | |||||||||| ||| ||| || |||| |||||||||||||||||||||||    |||||| ||||||||||    
T  16000907 tatatgcaatcaccaacaacatctcaatcactcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatg 16000986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25756856 - 25756935
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||| |||||||  ||||||||||| |||| || ||||||||||||||||| |||||    |||||| ||||||||||    
T  25756856 tatatgcattcaccggcaatatcacaatcaattaacatatatgtattcaccaaaaatatcacaatcaatcaacatatatg 25756935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 37654933 - 37654832
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatc 184  Q
    ||||||||||||||| |||||| ||||  || |||||| ||| ||||||| | ||||||| ||||||||||||||||||   |||||||| ||| || ||    
T  37654933 attcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattccaagt-aaagagaaaatacaacaccttatgataaatatcatattc 37654836  T
Q  185 aaca 188  Q
    ||||    
T  37654835 aaca 37654832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24238486 - 24238520
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaa 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  24238486 tatatgtattcaccaacaatatcacaatcaatcaa 24238520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 33171137 - 33171261
Alignment:
Q  63 catcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaaca 162  Q
    |||||||||| |||||  || || ||||||||||| |||| ||| ||||| || |||||| |||| |||||| | ||||||| ||||||||||| |||||    
T  33171137 catcaattaatatataaacattaatcaacatcaaccatataatatagttccactactccaaatac-ttctcatattccaagt-aaagagaaaatgcaaca 33171234  T
Q  163 caccatgataaacatcgtaatcaacac 189  Q
    |   |||||||| ||| || |||||||    
T  33171235 ccttatgataaatatcatattcaacac 33171261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 21108413 - 21108601
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||||||| |||||||||||  ||||||| |||||||||||||||||||||||    |||||| |||||||||| |||||||||||||||||||    
T  21108413 tatatgtattcaccgacaatatcacactcaatcaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgtaatattcaacatcaactat 21108512  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||   ||| |||||||| || |||||||    
T  21108513 atcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacaccttatggtaaacatcatattcaacac 21108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 14343021 - 14342838
Alignment:
Q  9 ttcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcataga 108  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||      
T  14343021 ttcaccaacaatatcacaatcaatcaacatatatgtattcaccaacaatatcctcatcaattaacatatatgcattattcaacatcaactatatcatatt 14342922  T
Q  109 gttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacactta 192  Q
    ||||||||||||||||   ||||||||||| ||| | |  ||||||||||||||||  |||||||||||| || ||||||||||    
T  14342921 gttcaacaactccataccatttctcacaattcaattaatggagaaaatacaacacattatgataaacatcatattcaacactta 14342838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 20455359 - 20455166
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| |||||||||||||||||||| |||| || |||||||||||||||||||||||    |||||| |||||||||||| || ||||||||||||||    
T  20455359 tatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaactat 20455260  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttaga 194  Q
    |||||| ||||||||||||||||  | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || ||||||||||||    
T  20455259 atcatatagttcaacaactccattcagtttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacttaga 20455166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11964854 - 11965042
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctca-tcaattaacatatatgcaatattcaacatcaacta 99  Q
    |||||| ||||||| || ||||||||| |||| || ||||||||||||||| ||||||| | || ||||| |||||||||||| || |||||||||||||    
T  11964854 tatatgcattcaccgacgatatcacaatcaattaacatatatgtattcaccgacaatat-cacactcaatcaacatatatgcattaatcaacatcaacta 11964952  T
Q  100 tatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    ||| ||  |||||||||||| |||| | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || |||||||    
T  11964953 tattatttagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 11965042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 20833309 - 20833214
Alignment:
Q  63 catcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaataca 159  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  20833309 catcacttaacatatatgcattattcaacatcaactatatcatatagttcaacaactccatattatttctcacaatacaagt-aaagagaaaataca 20833214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 33627681 - 33627563
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaa 186  Q
    ||||| |||||||||||||| ||||||||||||||||| | ||| ||| ||| ||||| || ||||||||||||||||| |||||||||| | || ||||    
T  33627681 tcaacttcaactatatcatatagttcaacaactccatacaatttttcataatacaagtaaaggagaaaatacaacacactatgataaaca-catattcaa 33627583  T
Q  187 cacttagagagcactcacat 206  Q
    ||||||||| ||| ||||||    
T  33627582 cacttagagggcattcacat 33627563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 23414099 - 23414199
Alignment:
Q  63 catcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaaca 162  Q
    |||||||| | |||||| || || |||||||||||||||| ||| || |||||||||||||| ||||||||||| ||||||| || ||||||||||||||    
T  23414099 catcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca 23414198  T
Q  163 c 163  Q
    |    
T  23414199 c 23414199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 24226764 - 24226660
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatc 184  Q
    ||||||||||||||| |||||| ||||||||||||||||| | ||||||||||| ||||| || |||||| || ||||||  |||||||||||| || ||    
T  24226764 attcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaagtaaaacacattatgataaacatcatattc 24226665  T
Q  185 aacac 189  Q
    |||||    
T  24226664 aacac 24226660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11764824 - 11764773
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaa 53  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  11764824 tatatgtattcaccaacaatatcacaatc-atcaatatatatgtattcaccaa 11764773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 12134997 - 12134837
Alignment:
Q  18 aatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaa 117  Q
    ||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  12134997 aatatcataaccaatcaacatatatgtattcaccaataatatcttcatcaattaacatagatgcattattcaacatcaactatatcatatagttcaacaa 12134898  T
Q  118 ctccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  12134897 ctccatatactttctcacaatccaagtaaaagagaaaatacaacactttatgataaacatc 12134837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 17376819 - 17376617
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| ||||||   ||||||||||||||||||||||    |||||| |||||||||||| ||  ||||||||||||     
T  17376819 tatatgcattcaccgacaatatcacaatcaatca---tatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaaccaacatcaactaa 17376723  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttagagagcac 200  Q
    |||||| | || |||||| ||||||| ||||||||||| ||||| || ||||||||||||||||| |||||||||||| || |||||||||||| ||||     
T  17376722 atcatataatttaacaaccccatataatttctcacaattcaagtaaaggagaaaatacaacacactatgataaacatcatattcaacacttagaaagcat 17376623  T
Q  201 tcacat 206  Q
    ||||||    
T  17376622 tcacat 17376617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 5371960 - 5371768
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| |||||||||||||||||||| |||| || |||||||||||||||||||||||    |||||| |||||||||||| || ||||||||||||||    
T  5371960 tatatgcattcaccaacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcaactat 5371861  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttaga 194  Q
    |||||| || |||||||||||||| | ||||||||||| || |  || ||||||||||||||||  |||||||||||| || ||||||| ||||    
T  5371860 atcatatag-tcaacaactccatacagtttctcacaattcaggcaaaggagaaaatacaacacattatgataaacatcatattcaacacataga 5371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 19558251 - 19558413
Alignment:
Q  16 acaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaac 115  Q
    ||||||| |||| | || || |||||||||||||||||||||||    |||||| |||| ||||| | || ||||||||||||||||||||  |||||||    
T  19558251 acaatataacaatccattaacatatatgtattcaccaacaatatcacaatcaatcaacagatatgtattaatcaacatcaactatatcatatggttcaac 19558350  T
Q  116 aactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatc 178  Q
    ||||| ||| | ||||||||||| ||||| || ||||||||||||||||  ||||||||||||    
T  19558351 aactcgatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatc 19558413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 54364834 - 54364646
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||||||||    || ||| |||||||||| | |   ||||||| ||| |    
T  54364834 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacaatatcacaataaatcaacatatatgtattcaccaacatcgacttt 54364735  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| | |||||||||  ||||   ||||||||||||||||| || |||||||||||||||   |||||||| ||| || |||||||    
T  54364734 atcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgataaatatcatattcaacac 54364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 49070727 - 49070803
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacac 163  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  49070727 tcaacatcaactatataatatagctcaacaactccatatactttctcacaatccaagtaaaggagagaatacaacac 49070803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 14570160 - 14570317
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||| ||||    |||||| |||||||||| | |   ||| |||||||      
T  14570160 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaacttc 14570259  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatac 158  Q
    |||||| | |||||||||  ||||   |||||||||||| || | || ||||||||||    
T  14570260 atcataaaattcaacaacatcatactatttctcacaatcaaaataaaggagaaaatac 14570317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 17213122 - 17213045
Alignment:
Q  112 caacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||||| |||| | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || |||||||    
T  17213122 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 17213045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 16226449 - 16226363
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaa 174  Q
    ||||||||||  |||||||| | | ||||||||||||| | || |||||||||||||| || ||||||||||||||||  ||||||||    
T  16226449 tcaacatcaatcatatcatataatccaacaactccatacaattcctcacaatccaagt-aacgagaaaatacaacacattatgataaa 16226363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19558273 - 19558319
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtatt 47  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||    
T  19558273 tatatgtattcaccaacaatatcacaatcaatcaacagatatgtatt 19558319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 24237789 - 24237891
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaa 186  Q
    ||||||||||||||||  || |  |||||||||||||| || |||| | ||||||||| || |||||||||||| ||   |||||||| ||| || ||||    
T  24237789 tcaacatcaactatatattatatctcaacaactccatacacgttcttataatccaagtaaaggagaaaatacaaaaccttatgataaatatcatattcaa 24237888  T
Q  187 cac 189  Q
    |||    
T  24237889 cac 24237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 15014567 - 15014492
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaaca 162  Q
    ||||||||||||||| |||||| ||||  || |||||| ||| ||||||| | ||||||| |||||||||||||||||    
T  15014567 attcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattccaagt-aaagagaaaatacaaca 15014492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 19082401 - 19082257
Alignment:
Q  45 attcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagt 144  Q
    |||||||||||||||   |||||||||| |||||| || |   ||||||| |||| |||||| | ||||| |||| |||  | ||||| ||||| |||||    
T  19082401 attcaccaacaatatcaccatcaattaatatatatacattcaccaacatcgactacatcatataattcaataacttcatgcaatttcttacaattcaagt 19082302  T
Q  145 caaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
     || ||||||||| | ||| | | |||||||||| || |||||||    
T  19082301 aaaggagaaaatatatcacgctaagataaacatcatattcaacac 19082257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 47469611 - 47469537
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacac 163  Q
    ||||||||||| |||| ||| ||||| || |||||| |||| |||||||| ||||||| ||||||||||| ||||||    
T  47469611 tcaacatcaaccatataatatagttctaccactccaaatac-ttctcacattccaagt-aaagagaaaatgcaacac 47469537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 102; Significance: 7e-51; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 5386 - 5193
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||| |||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  5386 tatatgcattcaacaacaatatcacaatcaatccacatatatgtattcaccaacaatatcctcatcaattaacatatatacattattcaacatcaactat 5287  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttaga 194  Q
    |||||| |||||||||||| ||||   ||||||||||| ||| | |  ||||||||||||||||  |||||||||||| || ||||||| ||||    
T  5286 atcatatagttcaacaacttcataccatttctcacaattcaattaatggagaaaatacaacacattatgataaacatcttattcaacacctaga 5193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5423 - 5365
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  5423 tatatttattcaccaacaatatcacaaccaatcaacatatatgcattcaacaacaatat 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5460 - 5402
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||| ||||||| |||||||||||| ||||  | |||||| ||||||||||||||||    
T  5460 tatatgcattcaccgacaatatcacaatcaattgacatatatttattcaccaacaatat 5402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 5e-49; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 39 - 189
Target Start/End: Original strand, 6093775 - 6093925
Alignment:
Q  39 atatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaat 138  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  6093775 atatgtattcaccaacaatatcctcatcaattaacatatatgcaatattcaacaataactatatcatatagttcaacaactccatatactttctcacaat 6093874  T
Q  139 ccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| || ||||||||||  | ||  |||||||||||| || |||||||    
T  6093875 ccaagtaaaggagaaaatacttcgcattatgataaacatcatattcaacac 6093925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 22331623 - 22331828
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||   |||||||||| ||||||||| || ||||||| ||||||    
T  22331623 tatatgtattcaccaacaatattacaatcaatcaacatatatgtatt-accaacaatatcaccatcaattaatatatatgcattaatcaacataaactat 22331721  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaa-cacttagagagca 199  Q
    |||||| ||||||||||||||||| | ||||||||||| ||||| || ||||| ||||||||||  |||||||||||| || |||| ||| |||| ||||    
T  22331722 atcatatagttcaacaactccatacaatttctcacaatacaagtaaaggagaagatacaacacattatgataaacatcatattcaatcacctagaaagca 22331821  T
Q  200 ctcacat 206  Q
     ||||||    
T  22331822 ttcacat 22331828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 18534731 - 18534919
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || ||||||||||||| ||| |||||    |||||| |||||||||||| || ||||||||||||||    
T  18534731 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcatcaagaatatcacaatcaatcaacatatatgcattaatcaacatcaactat 18534830  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||  ||||||| |||| || |||||||    
T  18534831 atcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgataatcatcatattcaacac 18534919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 24562133 - 24561946
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| ||||||||| || |||| || |||||||||||||||||||||||    |||||| |||||||||||| || |||||||| ||| |    
T  24562133 tatatgcattcaccgacaatatcaaaatcaattaacatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacatcgacttt 24562034  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaaca 188  Q
    |||||| | |||||||||  ||||   ||||||||||||||||| || |||||||||||||||   |||||||||||| || ||||||    
T  24562033 atcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaaca 24561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 43641704 - 43641808
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatc 184  Q
    ||||||||||||||| |||||| ||||||||||||||||| | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || ||    
T  43641704 attcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattc 43641803  T
Q  185 aacac 189  Q
    |||||    
T  43641804 aacac 43641808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 45618405 - 45618509
Alignment:
Q  102 tcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttagagagcact 201  Q
    ||||| |||||||||||| |||| | ||||||||||| ||||| |||||||||||||||||||  |||||||| ||| || ||||||| |||| |||| |    
T  45618405 tcatatagttcaacaacttcatacaatttctcacaattcaagtaaaagagaaaatacaacacattatgataaaaatcatattcaacacgtagaaagcatt 45618504  T
Q  202 cacat 206  Q
    |||||    
T  45618505 cacat 45618509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 19434756 - 19434653
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatc 184  Q
    ||||||||||||||| |||||| ||||||| |||||| || | ||||||||||| ||||| || |||||||||||| |||  |||||||||||| || ||    
T  19434756 attcaacatcaactacatcatatagttcaaaaactccttacaatttctcacaattcaagtaaaggagaaaatacaatacattatgataaacatcatattc 19434657  T
Q  185 aaca 188  Q
    ||||    
T  19434656 aaca 19434653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 22331587 - 22331665
Alignment:
Q  2 atatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    ||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||   |||||| ||||||||||    
T  22331587 atatgtattcatcaataatatcacaatcaatcaacatatatgtattcaccaacaatattacaatcaatcaacatatatg 22331665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 164
Target Start/End: Original strand, 20272299 - 20272426
Alignment:
Q  37 atatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcaca 136  Q
    ||||||| ||||||| |||||||    ||||||||||||||||| | |   ||||||| ||| ||||||| | ||||| |||  |||| | |||||||||    
T  20272299 atatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacatcgactttatcatataattcaataacatcatacaatttctcaca 20272398  T
Q  137 atccaagtcaaagagaaaatacaacaca 164  Q
    |||||||| || ||||||||||||||||    
T  20272399 atccaagtaaaggagaaaatacaacaca 20272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 45618754 - 45618691
Alignment:
Q  39 atatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatat 102  Q
    ||||| |||||||||||||||   |||||||||||||||||||| || ||||||||||||||||    
T  45618754 atatgcattcaccaacaatatcaccatcaattaacatatatgcattaatcaacatcaactatat 45618691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 6093723 - 6093776
Alignment:
Q  16 acaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaat 69  Q
    |||||||||||| ||||||  ||||||||||||||||||||||| |||||||||    
T  6093723 acaatatcacaatcaatcagcatatatgtattcaccaacaatatcctcatcaat 6093776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20272300 - 20272354
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaaca 55  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||||    
T  20272300 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaca 20272354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 24840708 - 24840876
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||| |||||| ||| ||||    |||||| || ||| || ||     ||||||| ||| |    
T  24840708 tatatgttttcaccaacaatatctcaatcaatcaacatatatgcattcacaaaccatatcacaatcaatcaatatacattca----ccaacatcgacttt 24840803  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaa 174  Q
    |||||| | |||||||||  |||||  ||||||||||| |||||  | ||||||||||||||||  ||||||||    
T  24840804 atcatataattcaacaacatcatattatttctcacaattcaagt-gaggagaaaatacaacacattatgataaa 24840876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29113148 - 29113200
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaa 53  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||    
T  29113148 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaa 29113200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 9715 - 9909
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||| |||||||||||||||| ||||||| |||| | ||||||||||||||||   ||||||||| |||||||||| || ||||||||||||||    
T  9715 tatatgtattgaccaacaatatcacaatcaatcaacatatctatattcaccaacaatatcaccatcaattatcatatatgcattaatcaacatcaactat 9814  T
Q  101 atcatagagttcaacaactccata-tactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacacttaga 194  Q
    |||||| |||||||||||||||||  | ||||||||||| ||||| ||||||||||||||||| |  ||| |||||||| || ||||||| ||||    
T  9815 atcatatagttcaacaactccatacaattttctcacaattcaagtaaaagagaaaatacaacatattatggtaaacatcatattcaacacctaga 9909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 4e-46; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 33396204 - 33396393
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| || |||| ||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||    
T  33396204 tatatgcattcaccgacaatatcacaatcattcaacatatatgtattcaccgacaatatcctaatcaattaacatatatgcaacattcaacatcaactat 33396303  T
Q  101 atcatagagttcaacaactccatatactttctcacaa-tccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| |||||||||||  |||||  |||||||||| ||||||| || |||||||||||||||   | |||||||||| || |||||||    
T  33396304 atcatatagttcaacaacatcatattatttctcacaattccaagtaaatgagaaaatacaacaccttacgataaacatcatattcaacac 33396393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 77305 - 77184
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || |||| ||||||||||||||||||    |||||| |||||||||||| || ||| ||||||||||    
T  77305 tatatgcattcacccacaatatcacaatcaattaacatatgtgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaccatcaactat 77206  T
Q  101 atcatagagttcaacaactcca 122  Q
    |||||| |||| ||||||||||    
T  77205 atcatatagtttaacaactcca 77184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20821859 - 20821938
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||| ||||||| |||||||||||| |||| || ||||||||||||||||||| |||  | |||||| ||||||||||    
T  20821859 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaacattatcataatcaatcaacatatatg 20821938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 20821896 - 20822068
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||| ||||    |||||| ||||||||| ||     | ||||||||| |    
T  20821896 tatatgtattcaccaacattatcataatcaatcaacatatatgtactcaccaaccatatcacaatcaatcaacatatattca----cctacatcaacttt 20821991  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacat 177  Q
    |||||| | |||||||||  || |   ||||||||||||||| | || ||||||||||  ||||  |||||||||||    
T  20821992 atcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaatacttcacattatgataaacat 20822068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 21224123 - 21224241
Alignment:
Q  37 atatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatca-tagagttcaacaactccatatactttctcac 135  Q
    ||||||| | |||||||||||||   ||||||||| | |||||| |||| |||||| |||||| |||| || |  |||||||||||||| | ||||||||    
T  21224123 atatatgcactcaccaacaatatcaccatcaattagcttatatgtaataatcaacaacaactacatcattacatctcaacaactccatacaatttctcac 21224222  T
Q  136 aatccaagtcaaagagaaa 154  Q
    ||| ||||| || ||||||    
T  21224223 aattcaagtaaaggagaaa 21224241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 8539249 - 8539173
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacac 163  Q
    ||||||||||||||| |||||| ||||  ||| ||||| ||| ||||||| | ||||||| ||||||||||||||||||    
T  8539249 attcaacatcaactacatcatatagtttcacagctccaaata-tttctcatattccaagt-aaagagaaaatacaacac 8539173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 8604488 - 8604412
Alignment:
Q  85 attcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacac 163  Q
    ||||||||||||||| |||||| ||||  ||| ||||| ||| ||||||| | ||||||| ||||||||||||||||||    
T  8604488 attcaacatcaactacatcatatagtttcacagctccaaata-tttctcatattccaagt-aaagagaaaatacaacac 8604412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 93; Significance: 2e-45; HSPs: 5)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5906 - 5718
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| |  |||||||||||||||||||||||    |||||| |||||||||||| || ||||| ||||||||    
T  5906 tatatgcattcaccgacaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaactat 5807  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| ||||||||||||||||| | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || |||||||    
T  5806 atcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 1511 - 1338
Alignment:
Q  16 acaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactatatcatagagttcaac 115  Q
    |||||||||||| |||| |  |||||||||||||||||||||||    |||||| |||||||||||| || ||||| |||||||||||||| ||||||||    
T  1511 acaatatcacaatcaattagcatatatgtattcaccaacaatatcacaatcaatcaacatatatgcattaatcaacgtcaactatatcatatagttcaac 1412  T
Q  116 aactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    ||||||||| | ||||||||||| ||||| || ||||||||||||||||  |||||||||||| || |||||||    
T  1411 aactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 36064 - 35884
Alignment:
Q  7 tattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctc-atcaattaacatatatgcaatattcaacatcaactatatcat 105  Q
    ||||||||||||||||||||| || |||| |||||||||||||| ||||||| |||| |||||| |||||||||    |   ||| |||||||  |||||    
T  36064 tattcaccaacaatatcacaatca-tcaacatatatgtattcactaacaata-tctcaatcaatcaacatatatattttcaccaatatcaactgcatcat 35967  T
Q  106 agagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    | | ||||||| |  ||||   ||||||| | ||||||| |||||||||||||| ||||| |||||||||||| || |||||||    
T  35966 ataattcaacatcatcatacgatttctcatattccaagt-aaagagaaaatacaccacactatgataaacatcatattcaacac 35884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1489 - 1447
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatg 43  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  1489 tatatgtattcaccaacaatatcacaatcaatcaacatatatg 1447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36034 - 35982
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaa 53  Q
    ||||||||||||| ||||||||| ||| ||||||| |||||| | ||||||||    
T  36034 tatatgtattcactaacaatatctcaatcaatcaacatatatattttcaccaa 35982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 11494 - 11674
Alignment:
Q  10 tcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacat-caactatatcataga 108  Q
    |||||||||| ||||| | || | || ||||||| ||||||| |||||||   ||||| | |||||||||||| || ||||||| ||||||||| ||| |    
T  11494 tcaccaacaaaatcaccatcacttaacatatatgcattcaccgacaatatcaccatcagtcaacatatatgcattaatcaacattcaactatataatata 11593  T
Q  109 gttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
      ||||||||| |||| ||||||||||||||||||| || ||||||||| |||||   |||||||||||| || |||||||    
T  11594 actcaacaacttcatacactttctcacaatccaagtaaaggagaaaataaaacaccttatgataaacatcatattcaacac 11674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 55; Significance: 8e-23; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 14229 - 14075
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||    |||||| |||||||||| | |   |||||||||||||    
T  14229 tatatgtattcaccaacaatatcacaatcgatcaacatatatgtattcaccaaccatatcacaatcaatcaacatatatgtattcaccaacatcaactat 14130  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaa 155  Q
    |||||| | |||||||||  || |   ||||||||||||||| | || |||||||    
T  14129 atcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaa 14075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 14248 - 14208
Alignment:
Q  19 atatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    ||||||||| |||| || |||||||||||||||||||||||    
T  14248 atatcacaatcaattaacatatatgtattcaccaacaatat 14208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 755 - 868
Alignment:
Q  76 atatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaac 175  Q
    ||||||| || ||||||| ||||||||| ||  ||||||||||  ||| |||||||||||||||||||| || ||||||||||||||||  |||||||||    
T  755 atatgcattaatcaacataaactatatcctatcgttcaacaacatcatgtactttctcacaatccaagtaaaggagaaaatacaacacattatgataaac 854  T
Q  176 atcgtaatcaacac 189  Q
    ||| || |||||||    
T  855 atcatattcaacac 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 4845 - 4947
Alignment:
Q  87 tcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaa 186  Q
    |||| ||||||||||| ||| || ||||||||| |||| ||||||||||||||||||| || |||||||||||||||   |||||||||||| || ||||    
T  4845 tcaatatcaactatataatatagctcaacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaa 4944  T
Q  187 cac 189  Q
    |||    
T  4945 cac 4947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 5e-18; HSPs: 6)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 255702 - 255644
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  255702 tatatgtattcaccaacaatatcacaatcaatcaacatatatgtattcaccaaaaatat 255644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 255628 - 255570
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    ||||| |||| || ||||||||||||| ||||| | |||||||||||||||||||||||    
T  255628 tatatttatttactaacaatatcacaatcaatccacatatatgtattcaccaacaatat 255570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 255720 - 255660
Alignment:
Q  20 tatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    ||||||||||||| || |||||||||||||||||||||||    |||||| ||||||||||    
T  255720 tatcacaaccaattaagatatatgtattcaccaacaatatcacaatcaatcaacatatatg 255660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 98370 - 98324
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtatt 47  Q
    ||||| |||||||||||||||||| ||  ||||||||||||||||||    
T  98370 tatatatattcaccaacaatatcataattaatcaatatatatgtatt 98324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 255665 - 255607
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatat 59  Q
    |||||||||||||||| |||||||||| ||||| | |||||| |||| || ||||||||    
T  255665 tatatgtattcaccaaaaatatcacaatcaatccacatatatttatttactaacaatat 255607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 255591 - 255551
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatata 41  Q
    |||||||||||||||||||||||| || ||||||| |||||    
T  255591 tatatgtattcaccaacaatatcaaaatcaatcaacatata 255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 12284 - 12200
Alignment:
Q  72 acatatatgcaatattcaacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaata 157  Q
    ||||||||||| || |||||||||||||||||||| |||||||||| |||||| | ||||||||||| ||||| || |||||||||    
T  12284 acatatatgcattaatcaacatcaactatatcatatagttcaacaattccatacaatttctcacaattcaagt-aaggagaaaata 12200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 21349 - 21162
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||||| ||| |||||||||||||| ||||||| ||||||||||| || ||||||||    |||||| |||||||||| | |  |||||||| ||| |    
T  21349 tatatgtactcatcaacaatatcacaatcaatcaacatatatgtatttactaacaatatcacaatcaatcaacatatatgtattcatcaacatcgacttt 21250  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||| | ||| |||||  ||||   ||||||||||| |||||  | ||||||||||| ||||  |||||||| ||| || |||||||    
T  21249 atcatataattccacaacatcatactatttctcacaattcaagt-gaggagaaaatacatcacagtatgataaaaatcatattcaacac 21162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21386 - 21307
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatg 80  Q
    |||||||| |||||||||||||| ||| ||||||| ||||||||| ||| |||||||||    |||||| ||||||||||    
T  21386 tatatgtactcaccaacaatatcgcaatcaatcaacatatatgtactcatcaacaatatcacaatcaatcaacatatatg 21307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 34720 - 34627
Alignment:
Q  95 aactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgataaacatcgtaatcaacac 189  Q
    |||||||| ||| || |||||||||||||| ||||||||||| ||||||| || |||||||||||||||   ||||||||| || || |||||||    
T  34720 aactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacttcatattcaacac 34627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 44900 - 44772
Alignment:
Q  63 catcaattaacatatatgcaatattcaacatcaactatatc--atagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaa 160  Q
    |||||||| | |||||| || || ||||||||||||||||   ||| || |||||||||| ||| ||||||||||| |||||||  | ||||||||||||    
T  44900 catcaattgatatatatacattaatcaacatcaactatatataatatagctcaacaactctatacactttctcacattccaagtagaggagaaaatacaa 44801  T
Q  161 cacaccatgataaacatcgtaatcaacac 189  Q
    |||   || ||||||||| || |||||||    
T  44800 caccttataataaacatcatattcaacac 44772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 8420 - 8304
Alignment:
Q  73 catatatgcaatattcaacat-caactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacacaccatgat 171  Q
    ||||||| || || ||||||| ||||||||| ||| || | ||||||| |||| ||||||||||||||||||| || |||||||||||||||   |||||    
T  8420 catatatacattaatcaacattcaactatataatatagct-aacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgat 8322  T
Q  172 aaacatcgtaatcaacac 189  Q
    ||| ||| || |||||||    
T  8321 aaatatcatattcaacac 8304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 247216 - 247059
Alignment:
Q  1 tatatgtattcaccaacaatatcacaaccaatcaatatatatgtattcaccaacaatattctcatcaattaacatatatgcaatattcaacatcaactat 100  Q
    |||||| ||||||| |||||||||||| |||| || |||||||||||||||||| ||||    |||||| |||||||||| | |   ||| |||||||      
T  247216 tatatgcattcaccgacaatatcacaatcaattaacatatatgtattcaccaaccatatcactatcaatcaacatatatgtattcaccaatatcaacttc 247117  T
Q  101 atcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatac 158  Q
    |||||| | |||||||||  ||||   |||||||||||| || | || ||||||||||    
T  247116 atcataaaattcaacaacatcatactatttctcacaatcaaaataaaggagaaaatac 247059  T

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Target: scaffold0601 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 2280 - 2205
Alignment:
Q  88 caacatcaactatatcatagagttcaacaactccatatactttctcacaatccaagtcaaagagaaaatacaacac 163  Q
    ||||||| ||| ||||||| | |||||||||  |||||  ||||||||||||||||| || |||||||||||||||    
T  2280 caacatcgactttatcatataattcaacaacatcatattatttctcacaatccaagtaaaggagaaaatacaacac 2205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 8634 - 8598
Alignment:
Q  170 ataaacatcgtaatcaacacttagagagcactcacat 206  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8634 ataaacatcgtaatcaacacttagagagcattcacat 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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