View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7165_low_11 (Length: 311)
Name: NF7165_low_11
Description: NF7165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7165_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 2 - 266
Target Start/End: Complemental strand, 25933453 - 25933187
Alignment:
| Q |
2 |
gagaaattgtaagaagtg--tgagcttctactccaactctattctagtgaacgaattgaatggattttaagacgtgaattgaaatattctcaaaactgtc |
99 |
Q |
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| T |
25933453 |
gagaaattgtaagaagtggttgagcttctactccaactctgttccagtgaaccaactgaatcgattttaagatgtgaattgaaatattctcaaaactgtc |
25933354 |
T |
|
| Q |
100 |
ttggaatttcagttttgacattatcaaagtccatatcttcctctctnnnnnnnngcccatatcttccatttgattcacgtggtgtccgtcgctttctagg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| |
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| T |
25933353 |
ttggaatttcagttttgacattatcaaagtccatatcttcctctctaaaaaaaagcccatatcttccatttgattcacgtggtgtccatcactttctagg |
25933254 |
T |
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| Q |
200 |
aaattcaatttgaactggattttgtgttcatttgatgggagaaagaaaaaataaaacagggattcat |
266 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |
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| T |
25933253 |
aaattcaatttgaactgggttttgtgttcatttgatgggagaaagaaaaaattaaacatggattcat |
25933187 |
T |
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